Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000516

Physical Location & Seq

Genomic Coordinates Forward (+)

11043820 .. 11045765

Gene Structure 1946 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0134900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGTCTTCTACAAGAAAAACCATTAATCACGACCCCTTCAATTTCATTTTAGTTCCTCCGACAATCAAAGCCATATATTTTTGCTCAGTGGCTTCAGTCTCTCTCATCCTCTACTTCGTCTTATCAAACCACCCCCACTATTTCACCCAACACCATAACGTAGTGCTCCCAACCATCTTCAACCACCATACAATCACCACCGTCAATGACTCCGACAAGACAAACATTTCCCACATATTGTTCGGCATCGGAGGCTCGGTGAAGTCGTGGAACAAACGCCGTCACTACATTGACCTATGGTGGAAGCCTAATGTCACCCGCGGGTTTATCTGGCTGGACCAGAAACCCTCGCCCAACATAACGTGGCCAGAGACCTCGCCAGAGTACAAAGTCTCAGCGGACACATCACGGTTCAAGTACTCCTGCTGGTACGGTTCCCGCTCCGCCATTCGAATTGCAAGAATTGTAAAAGAGAGTTTCGAGTTGGGCGTTGAGAATGTAAGGTGGTTTGTCATGGGAGACGATGATACGGTGTTTTTCACTGACAACTTAGTTACGGTGTTAGCGAAATACGATCACAATCAGATGTATTACATTGGCGGGAATTCCGAGAGTGTGGAGCAAGATGTGATACACTCGTACACTGTGGCCTACGGCGGTGGTGGTTTTGCTATAAGCTACCCATTGGCAGCTGAGCTGGTTAGGGTTTTGGACGGGTGCATTGATAGGTATGATGCGTTTTACGGCTCAGATCAGAAGGTCCGGGGATGTTTGAGCGAGATTGGGGTGCCCTTAACAAAAGAGCTAGGATTTCACCAGGTTGACATACGAGGGAGTCCTTACGGTTTGCTAGCGGCGCACCCGGTAGCACCACTAGTGTCACTGCACCACTTGGATTACGTGGAGCCCATGTTTCCTGGCCTAACCCCGATTGACTCAGTTAAGAAGTTGGTACGTGTGTATAAAATGGATCCGGGTCGGACCTTACAGCATAGTTTTTGCTATGACTTGAGACGGAATTGGTCAGTTTCAGTGTCTTGGGGTTACACAGTGCAGTTGTACCCGTCGTTGGTGACGGCAAAGAACCTGGAAACAGCCTTGGAGACGTTTCAGACATGGAGGAGTTGGGAAATGGGTCCGTACACGTTCAATACCCGATCCGTGAGCCCGGATCCATGTAAGAGACCGCTTGTGTATTTCTTGGATCGGGTTGAGAGTATTGGTGGGGATGAGACTTTGACTATGTACAAGAGGTACGCGGAGAAAGAAGAAAAAGATTGTCTCCAACGTGACTACATTGCTGCTTTGAGAGTTCAGTTTTTCAATGCCTCAGCTTCTAAGTTCAAACCTAACTTGTGGAATAAGGCACCACGTAGACAATGTTGCGAGATCATCGATGGCGGAGAAGGGGTTCAAAATGTGGTACTGCTCAAGGTCAGAGGTTGCAATTGCTTTGAGAGCGTGACTCCTCCGATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008198 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0010467 GO:0016043 GO:0016226 GO:0019538 GO:0022607 GO:0031163 GO:0031967 GO:0031974 GO:0031975 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914 GO:0048037 GO:0051186 GO:0051536 GO:0051537 GO:0051540 GO:0051604 GO:0070013 GO:0071704 GO:0071840 GO:0097428 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

492

Amino Acids

56.22

Weight (kDa)

8.17

Isoelectric Point (pI)

46.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fringe	PF02434	165 - 273	1.5e-11	Fringe-like
DUF604	PF04646	208 - 462	4.4e-106	Protein of unknown function, DUF604

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000516)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03900 AT5G03900
fragaria_vesca	FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18750 FvH4_6g18751 FvH4_6g18760
malus_domestica	MD12G1036400.v1.1 MD14G1023200.v1.1
prunus_persica	Prupe.7G109900_v2.0.a1 Prupe.7G109900_v2.0.a1 Prupe.7G109900_v2.0.a1
pyrus_communis	pycom12g02390 pycom14g02210
rosa_chinensis	RchiOBHm_Chr3g0473691 RchiOBHm_Chr3g0473711 RchiOBHm_Chr3g0473721 RchiOBHm_Chr3g0473731 RchiOBHm_Chr3g0473761 RchiOBHm_Chr6g0257921 RchiOBHm_Chr7g0229131
rosa_laevigata	RLG00000009927 RLG00000018798 RLG00000022503 RLG00000023987 RLG00000023989 RLG00000023993
rosa_multiflora	Rmu_co8137536.1_g000001 Rmu_sc0000140.1_g000001 Rmu_sc0000302.1_g000016 Rmu_sc0002897.1_g000003 Rmu_sc0002963.1_g000003 Rmu_sc0003069.1_g000002 Rmu_sc0004688.1_g000012 Rmu_sc0005617.1_g000005 Rmu_sc0005975.1_g000001 Rmu_sc0005978.1_g000005 Rmu_sc0005978.1_g000006 Rmu_sc0006074.1_g000005 Rmu_sc0007035.1_g000012 Rmu_sc0009453.1_g000002 Rmu_sc0013078.1_g000001 Rmu_ssc0000210.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029350 Rroxscaffold_6G00407830 Rroxscaffold_6G00407880 Rroxscaffold_6G00407900 Rroxscaffold_6G00407910 Rroxscaffold_6G00407940
rosa_rugosa	Rorug02G0048000 Rorug03G0134300 Rorug03G0134400 Rorug03G0134500 Rorug03G0134600 Rorug03G0134700 Rorug03G0134900 Rorug03G0135000 Rorug03G0135000
rosa_samantha	Rh2AG590800 Rh2CG599100 Rh3AG185600 Rh3AG185700 Rh3AG185800 Rh3AG186000 Rh3BG213700 Rh3BG213900 Rh3CG210300 Rh3CG210400 Rh3CG210500 Rh3CG210700 Rh3DG209400 Rh3DG209500 Rh3DG209600 Rh3DG209800
rosa_wichuraiana	Rw0G007990 Rw0G008000 Rw0G008020 Rw0G008870 Rw3G016960 Rw3G016970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	787, 1366
AccBSI	CCGCTC	1 cut(s)	441
AccI	GTMKAC	1 cut(s)	1375
AccII	CGCG	2 cut(s)	321, 1259
AclWI	GGATC	6 cut(s)	965, 978, 1152, 1166, 1179, 1212
AcoI	YGGCCR	1 cut(s)	365
AcsI	RAATTY	1 cut(s)	604
AcuI	CTGAAG	1 cut(s)	78
AfiI	CCNNNNNNNGG	1 cut(s)	1069
AflIII	ACRYGT	2 cut(s)	955, 1143
AgsI	TTSAA	7 cut(s)	40, 181, 415, 1150, 1324, 1345, 1415
AhlI	ACTAGT	1 cut(s)	874
AjnI	CCWGG	3 cut(s)	816, 916, 1086
AloI	GAACNNNNNNTCC	2 cut(s)	1395, 1427
AluBI	AGCT	5 cut(s)	678, 692, 697, 805, 1334
AluI	AGCT	5 cut(s)	678, 692, 697, 805, 1334
Alw21I	GWGCWC	1 cut(s)	168
Alw26I	GTCTC	9 cut(s)	103, 365, 397, 513, 1006, 1097, 1177, 1226, 1286
AlwI	GGATC	6 cut(s)	965, 978, 1152, 1166, 1179, 1212
AoxI	GGCC	3 cut(s)	365, 648, 919
ApeKI	GCWGC	2 cut(s)	689, 1301
ApoI	RAATTY	1 cut(s)	604
AseI	ATTAAT	1 cut(s)	24
Asp700I	GAANNNNTTC	1 cut(s)	1410
AspLEI	GCGC	1 cut(s)	859
AspS9I	GGNCC	4 cut(s)	337, 760, 981, 1136
AsuC2I	CCSGG	4 cut(s)	764, 863, 975, 1169
AsuHPI	GGTGA	6 cut(s)	136, 187, 271, 307, 806, 1084
AsuII	TTCGAA	1 cut(s)	451
AsuNHI	GCTAGC	1 cut(s)	850
AvaII	GGWCC	4 cut(s)	337, 760, 981, 1136
BaeGI	GKGCMC	1 cut(s)	792
BaeI	ACNNNNGTAYC	4 cut(s)	623, 656, 944, 977
BalI	TGGCCA	1 cut(s)	367
BamHI	GGATCC	2 cut(s)	970, 1171
BanI	GGYRCC	2 cut(s)	787, 1366
BanII	GRGCYC	2 cut(s)	909, 1169
Bbv12I	GWGCWC	1 cut(s)	168
BbvCI	CCTCAGC	1 cut(s)	1330
BbvI	GCAGC	2 cut(s)	701, 1288
BccI	CCATC	2 cut(s)	182, 1391
BceAI	ACGGC	4 cut(s)	264, 670, 760, 1092
BciT130I	CCWGG	3 cut(s)	818, 918, 1088
BcnI	CCSGG	4 cut(s)	764, 863, 975, 1169
BcoDI	GTCTC	9 cut(s)	103, 365, 397, 513, 1006, 1097, 1177, 1226, 1286
BcuI	ACTAGT	1 cut(s)	874
BfaI	CTAG	3 cut(s)	806, 851, 875
BisI	GCNGC	3 cut(s)	690, 855, 1302
BlpI	GCTNAGC	1 cut(s)	693
BlsI	GCNGC	3 cut(s)	691, 856, 1303
BmcAI	AGTACT	1 cut(s)	419
Bme1390I	CCNGG	7 cut(s)	764, 818, 863, 918, 975, 1088, 1169
Bme18I	GGWCC	4 cut(s)	337, 760, 981, 1136
BmgT120I	GGNCC	4 cut(s)	337, 760, 981, 1136
BmiI	GGNNCC	7 cut(s)	436, 789, 906, 972, 1137, 1173, 1368
BmrFI	CCNGG	7 cut(s)	764, 818, 863, 918, 975, 1088, 1169
BmsI	GCATC	2 cut(s)	255, 724
BmtI	GCTAGC	1 cut(s)	854
BplI	GAGNNNNNCTC	1 cut(s)	1450
Bpu10I	CCTNAGC	1 cut(s)	1330
Bpu1102I	GCTNAGC	1 cut(s)	693
Bpu14I	TTCGAA	1 cut(s)	451
BpuEI	CTTGAG	2 cut(s)	1030, 1415
BpuMI	CCSGG	4 cut(s)	764, 863, 975, 1169
Bsa29I	ATCGAT	1 cut(s)	1395
BsaAI	YACGTR	3 cut(s)	901, 956, 1373
BsaBI	GATNNNNATC	1 cut(s)	579
BsaI	GGTCTC	2 cut(s)	365, 1177
BsaJI	CCNNGG	3 cut(s)	319, 763, 1098
BsaXI	ACNNNNNCTCC	6 cut(s)	243, 273, 896, 926, 1395, 1425
Bsc4I	CCNNNNNNNGG	1 cut(s)	1069
Bse3DI	GCAATG	1 cut(s)	1296
Bse8I	GATNNNNATC	1 cut(s)	579
BseBI	CCWGG	3 cut(s)	818, 918, 1088
BseCI	ATCGAT	1 cut(s)	1395
BseDI	CCNNGG	3 cut(s)	319, 763, 1098
BseGI	GGATG	3 cut(s)	105, 773, 1234
BseJI	GATNNNNATC	1 cut(s)	579
BseLI	CCNNNNNNNGG	1 cut(s)	1069
BseMI	GCAATG	1 cut(s)	1296
BseMII	CTCAG	6 cut(s)	99, 408, 684, 762, 951, 1344
BseRI	GAGGAG	2 cut(s)	1135, 1458
BseSI	GKGCMC	1 cut(s)	792
BseXI	GCAGC	2 cut(s)	701, 1288
BsgI	GTGCAG	2 cut(s)	869, 1073
Bsh1236I	CGCG	2 cut(s)	321, 1259
BshFI	GGCC	3 cut(s)	367, 650, 921
BshNI	GGYRCC	2 cut(s)	787, 1366
BshVI	ATCGAT	1 cut(s)	1395
BsiHKAI	GWGCWC	1 cut(s)	168
BsiSI	CCGG	4 cut(s)	763, 863, 974, 1169
BslI	CCNNNNNNNGG	1 cut(s)	1069
BsmAI	GTCTC	9 cut(s)	103, 365, 397, 513, 1006, 1097, 1177, 1226, 1286
BsmBI	CGTCTC	3 cut(s)	513, 1006, 1097
BsnI	GGCC	3 cut(s)	367, 650, 921
Bso31I	GGTCTC	2 cut(s)	365, 1177
Bsp119I	TTCGAA	1 cut(s)	451
Bsp1286I	GDGCHC	4 cut(s)	168, 792, 909, 1169
Bsp1407I	TGTACA	1 cut(s)	1245
Bsp143I	GATC	8 cut(s)	574, 751, 970, 1157, 1171, 1204, 1389, 1473
Bsp1720I	GCTNAGC	1 cut(s)	693
BspANI	GGCC	3 cut(s)	367, 650, 921
BspCNI	CTCAG	6 cut(s)	98, 407, 685, 761, 950, 1343
BspDI	ATCGAT	1 cut(s)	1395
BspFNI	CGCG	2 cut(s)	321, 1259
BspLI	GGNNCC	7 cut(s)	436, 789, 906, 972, 1137, 1173, 1368
BspOI	GCTAGC	1 cut(s)	854
BspPI	GGATC	6 cut(s)	965, 978, 1152, 1166, 1179, 1212
BspT104I	TTCGAA	1 cut(s)	451
BspT107I	GGYRCC	2 cut(s)	787, 1366
BspTNI	GGTCTC	2 cut(s)	365, 1177
BsrBI	CCGCTC	1 cut(s)	441
BsrDI	GCAATG	1 cut(s)	1296
BsrGI	TGTACA	1 cut(s)	1245
BssECI	CCNNGG	3 cut(s)	319, 763, 1098
BssMI	GATC	8 cut(s)	574, 751, 970, 1157, 1171, 1204, 1389, 1473
BssT1I	CCWWGG	1 cut(s)	1098
Bst2UI	CCWGG	3 cut(s)	818, 918, 1088
Bst4CI	ACNGT	8 cut(s)	202, 411, 434, 532, 559, 646, 845, 1051
BstAUI	TGTACA	1 cut(s)	1245
BstBAI	YACGTR	3 cut(s)	901, 956, 1373
BstBI	TTCGAA	1 cut(s)	451
BstC8I	GCNNGC	1 cut(s)	852
BstDEI	CTNAG	8 cut(s)	85, 394, 550, 693, 748, 937, 1330, 1338
BstDSI	CCRYGG	1 cut(s)	319
BstF5I	GGATG	3 cut(s)	105, 773, 1234
BstFNI	CGCG	2 cut(s)	321, 1259
BstHHI	GCGC	1 cut(s)	859
BstKTI	GATC	8 cut(s)	577, 754, 973, 1160, 1174, 1207, 1392, 1476
BstMAI	GTCTC	9 cut(s)	103, 365, 397, 513, 1006, 1097, 1177, 1226, 1286
BstMBI	GATC	8 cut(s)	574, 751, 970, 1157, 1171, 1204, 1389, 1473
BstMWI	GCNNNNNNNGC	3 cut(s)	252, 856, 1458
BstNI	CCWGG	3 cut(s)	818, 918, 1088
BstSCI	CCNGG	7 cut(s)	762, 816, 861, 916, 973, 1086, 1167
BstSLI	GKGCMC	1 cut(s)	792
BstUI	CGCG	2 cut(s)	321, 1259
BstV1I	GCAGC	2 cut(s)	701, 1288
BstX2I	RGATCY	2 cut(s)	970, 1171
BstYI	RGATCY	2 cut(s)	970, 1171
Bsu15I	ATCGAT	1 cut(s)	1395
BsuRI	GGCC	3 cut(s)	367, 650, 921
BsuTUI	ATCGAT	1 cut(s)	1395
BtgI	CCRYGG	1 cut(s)	319
BtsCI	GGATG	3 cut(s)	105, 773, 1234
BtsI	GCAGTG	1 cut(s)	881
BtsIMutI	CAGTG	6 cut(s)	93, 540, 642, 881, 1038, 1056
Cac8I	GCNNGC	1 cut(s)	852
CfoI	GCGC	1 cut(s)	859
Cfr13I	GGNCC	4 cut(s)	337, 760, 981, 1136
Cfr42I	CCGCGG	1 cut(s)	322
ClaI	ATCGAT	1 cut(s)	1395
CsiI	ACCWGGT	1 cut(s)	816
CviAII	CATG	4 cut(s)	514, 910, 1116, 1176
DdeI	CTNAG	8 cut(s)	85, 394, 550, 693, 748, 937, 1330, 1338
DpnI	GATC	8 cut(s)	576, 753, 972, 1159, 1173, 1206, 1391, 1475
DpnII	GATC	8 cut(s)	574, 751, 970, 1157, 1171, 1204, 1389, 1473
EaeI	YGGCCR	1 cut(s)	365
EciI	GGCGGA	2 cut(s)	433, 1416
Eco130I	CCWWGG	1 cut(s)	1098
Eco24I	GRGCYC	2 cut(s)	909, 1169
Eco31I	GGTCTC	2 cut(s)	365, 1177
Eco47I	GGWCC	4 cut(s)	337, 760, 981, 1136
Eco57I	CTGAAG	1 cut(s)	78
EcoRI	GAATTC	1 cut(s)	604
EcoRII	CCWGG	3 cut(s)	816, 916, 1086
EcoT14I	CCWWGG	1 cut(s)	1098
EcoT38I	GRGCYC	2 cut(s)	909, 1169
ErhI	CCWWGG	1 cut(s)	1098
Esp3I	CGTCTC	3 cut(s)	513, 1006, 1097
FaeI	CATG	4 cut(s)	517, 913, 1119, 1179
FatI	CATG	4 cut(s)	513, 909, 1115, 1175
FauI	CCCGC	4 cut(s)	314, 326, 446, 593
FblI	GTMKAC	1 cut(s)	1375
Fnu4HI	GCNGC	3 cut(s)	690, 855, 1302
FokI	GGATG	3 cut(s)	92, 780, 1241
FriOI	GRGCYC	2 cut(s)	909, 1169
Fsp4HI	GCNGC	3 cut(s)	690, 855, 1302
FspBI	CTAG	3 cut(s)	806, 851, 875
GlaI	GCGC	1 cut(s)	858
GluI	GCNGC	3 cut(s)	690, 855, 1302
HaeIII	GGCC	3 cut(s)	367, 650, 921
HapII	CCGG	4 cut(s)	763, 863, 974, 1169
HhaI	GCGC	1 cut(s)	859
Hin1II	CATG	4 cut(s)	517, 913, 1119, 1179
Hin6I	GCGC	1 cut(s)	857
HinP1I	GCGC	1 cut(s)	857
HincII	GTYRAC	1 cut(s)	823
HindII	GTYRAC	1 cut(s)	823
HinfI	GANTC	4 cut(s)	209, 835, 935, 1465
HpaII	CCGG	4 cut(s)	763, 863, 974, 1169
HphI	GGTGA	6 cut(s)	136, 187, 271, 307, 806, 1084
Hpy166II	GTNNAC	4 cut(s)	642, 823, 1143, 1376
Hpy188III	TCNNGA	1 cut(s)	29
Hpy8I	GTNNAC	4 cut(s)	642, 823, 1143, 1376
Hpy99I	CGWCG	1 cut(s)	1069
HpyAV	CCTTC	3 cut(s)	46, 751, 1400
HpyCH4III	ACNGT	8 cut(s)	202, 411, 434, 532, 559, 646, 845, 1051
HpyCH4IV	ACGT	8 cut(s)	159, 362, 900, 955, 1106, 1145, 1288, 1372
HpyCH4V	TGCA	5 cut(s)	458, 720, 886, 1054, 1446
HpyF10VI	GCNNNNNNNGC	3 cut(s)	252, 856, 1458
HpyF3I	CTNAG	8 cut(s)	85, 394, 550, 693, 748, 937, 1330, 1338
HpySE526I	ACGT	8 cut(s)	159, 362, 900, 955, 1106, 1145, 1288, 1372
Hsp92II	CATG	4 cut(s)	517, 913, 1119, 1179
HspAI	GCGC	1 cut(s)	857
KspI	CCGCGG	1 cut(s)	322
Kzo9I	GATC	8 cut(s)	574, 751, 970, 1157, 1171, 1204, 1389, 1473
LmnI	GCTCC	4 cut(s)	171, 446, 619, 904
Lsp1109I	GCAGC	2 cut(s)	701, 1288
LweI	GCATC	2 cut(s)	255, 724
MabI	ACCWGGT	1 cut(s)	816
MaeI	CTAG	3 cut(s)	806, 851, 875
MaeII	ACGT	8 cut(s)	159, 362, 900, 955, 1106, 1145, 1288, 1372
MaeIII	GTNAC	8 cut(s)	281, 313, 553, 879, 1043, 1072, 1289, 1462
MalI	GATC	8 cut(s)	576, 753, 972, 1159, 1173, 1206, 1391, 1475
MbiI	CCGCTC	1 cut(s)	441
MboI	GATC	8 cut(s)	574, 751, 970, 1157, 1171, 1204, 1389, 1473
MboII	GAAGA	2 cut(s)	169, 1280
MfeI	CAATTG	1 cut(s)	1447
MflI	RGATCY	2 cut(s)	970, 1171
MhlI	GDGCHC	4 cut(s)	168, 792, 909, 1169
MlsI	TGGCCA	1 cut(s)	367
MluCI	AATT	6 cut(s)	40, 453, 462, 604, 1018, 1447
MluNI	TGGCCA	1 cut(s)	367
MlyI	GAGTC	4 cut(s)	203, 844, 929, 1459
MmeI	TCCRAC	4 cut(s)	83, 237, 959, 1309
Mox20I	TGGCCA	1 cut(s)	367
MroXI	GAANNNNTTC	1 cut(s)	1410
MscI	TGGCCA	1 cut(s)	367
MseI	TTAA	3 cut(s)	24, 794, 942
Msp20I	TGGCCA	1 cut(s)	367
MspA1I	CMGCKG	3 cut(s)	321, 398, 692
MspI	CCGG	4 cut(s)	763, 863, 974, 1169
MspR9I	CCNGG	7 cut(s)	764, 818, 863, 918, 975, 1088, 1169
MunI	CAATTG	1 cut(s)	1447
MvaI	CCWGG	3 cut(s)	818, 918, 1088
MvnI	CGCG	2 cut(s)	321, 1259
MwoI	GCNNNNNNNGC	3 cut(s)	252, 856, 1458
NciI	CCSGG	4 cut(s)	764, 863, 975, 1169
NdeII	GATC	8 cut(s)	574, 751, 970, 1157, 1171, 1204, 1389, 1473
NheI	GCTAGC	1 cut(s)	850
NlaIII	CATG	4 cut(s)	517, 913, 1119, 1179
NlaIV	GGNNCC	7 cut(s)	436, 789, 906, 972, 1137, 1173, 1368
NmuCI	GTSAC	6 cut(s)	281, 313, 879, 1072, 1289, 1462
NspV	TTCGAA	1 cut(s)	451
PcsI	WCGNNNNNNNCGW	3 cut(s)	263, 486, 563
PdmI	GAANNNNTTC	1 cut(s)	1410
PkrI	GCNGC	3 cut(s)	691, 856, 1303
PleI	GAGTC	4 cut(s)	203, 843, 929, 1459
PpsI	GAGTC	4 cut(s)	203, 843, 929, 1459
Ppu21I	YACGTR	3 cut(s)	901, 956, 1373
PshBI	ATTAAT	1 cut(s)	24
Psp6I	CCWGG	3 cut(s)	816, 916, 1086
PspGI	CCWGG	3 cut(s)	816, 916, 1086
PspN4I	GGNNCC	7 cut(s)	436, 789, 906, 972, 1137, 1173, 1368
PspPI	GGNCC	4 cut(s)	337, 760, 981, 1136
PsuI	RGATCY	2 cut(s)	970, 1171
PvuII	CAGCTG	1 cut(s)	692
SacII	CCGCGG	1 cut(s)	322
SaqAI	TTAA	3 cut(s)	24, 794, 942
SatI	GCNGC	3 cut(s)	690, 855, 1302
Sau3AI	GATC	8 cut(s)	574, 751, 970, 1157, 1171, 1204, 1389, 1473
Sau96I	GGNCC	4 cut(s)	337, 760, 981, 1136
ScaI	AGTACT	1 cut(s)	419
SchI	GAGTC	4 cut(s)	203, 844, 929, 1459
ScrFI	CCNGG	7 cut(s)	764, 818, 863, 918, 975, 1088, 1169
SduI	GDGCHC	4 cut(s)	168, 792, 909, 1169
SexAI	ACCWGGT	1 cut(s)	816
SfaNI	GCATC	2 cut(s)	255, 724
Sfr303I	CCGCGG	1 cut(s)	322
SfuI	TTCGAA	1 cut(s)	451
SgrBI	CCGCGG	1 cut(s)	322
SinI	GGWCC	4 cut(s)	337, 760, 981, 1136
SmlI	CTYRAG	2 cut(s)	1009, 1430
SmoI	CTYRAG	2 cut(s)	1009, 1430
SpeI	ACTAGT	1 cut(s)	874
Sse9I	AATT	6 cut(s)	40, 453, 462, 604, 1018, 1447
SspMI	CTAG	3 cut(s)	806, 851, 875
StyD4I	CCNGG	7 cut(s)	762, 816, 861, 916, 973, 1086, 1167
StyI	CCWWGG	1 cut(s)	1098
TaaI	ACNGT	8 cut(s)	202, 411, 434, 532, 559, 646, 845, 1051
TaiI	ACGT	8 cut(s)	162, 365, 903, 958, 1109, 1148, 1291, 1375
TaqI	TCGA	3 cut(s)	451, 480, 1395
TasI	AATT	6 cut(s)	40, 453, 462, 604, 1018, 1447
TatI	WGTACW	3 cut(s)	384, 417, 1245
TauI	GCSGC	1 cut(s)	857
Tru1I	TTAA	3 cut(s)	24, 794, 942
Tru9I	TTAA	3 cut(s)	24, 794, 942
TscAI	CASTG	6 cut(s)	93, 547, 649, 888, 1038, 1056
TseFI	GTSAC	6 cut(s)	281, 313, 879, 1072, 1289, 1462
TseI	GCWGC	2 cut(s)	689, 1301
Tsp45I	GTSAC	6 cut(s)	281, 313, 879, 1072, 1289, 1462
TspDTI	ATGAA	1 cut(s)	34
TspGWI	ACGGA	3 cut(s)	1030, 1128, 1150
TspRI	CASTG	6 cut(s)	93, 547, 649, 888, 1038, 1056
VpaK11BI	GGWCC	4 cut(s)	337, 760, 981, 1136
VspI	ATTAAT	1 cut(s)	24
XapI	RAATTY	1 cut(s)	604
XmiI	GTMKAC	1 cut(s)	1375
XmnI	GAANNNNTTC	1 cut(s)	1410
XspI	CTAG	3 cut(s)	806, 851, 875
ZrmI	AGTACT	1 cut(s)	419

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.