Rorug02G0547700

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0001042
Physical Location & Seq
Forward (+)
67553920 .. 67566542
12623 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0547700.1

Sequence Viewer

Length: 2115 bp
ATGAACATCAAAGAACGCTGTTTTCGATATGCTTGTAATGAGCAGCAAGGAGGAGAGAAAATGTTAAAATCAATGCTTGGTTGCTGCAAGGTGTACATATCTGAAAGCAGAAATAGGCTTGCACTGGAGTCAATTGAGCGAGCTGCTAAGCGATTCTCGGAAGCACCCATTGTCAATAAGTTTGAAGATGAAACTTACAACAGAGTTGGCTACACTCTTGTCTCTAAGCTGGCTCCAAAGCCATCTGGGGACCCTTGTCCCTTGAGGATGGCTGTCCTTGCCATGGTTAAGGCTGCTTTTGAAACCATTGACCTTGAGTCGCACTGTGGAAGTCATCCCCGGCTTGGAGTTGTGGATCATATATGCTTTCACCCCCTTCTTGGTGCTTCGTTGGAACAGATGGCTGGTGTTGCAAACTCCTTAGCGGCAGATGTTGGCTCTAGTCTTCAAGTTCCTACATTTCTATATGGAGCTGCCCATGAAGAGAGGAGGGCACTTGATTCAATTAGAAGAGAGCTCGGTTACTTCAAGCCAAACTCTAGTGGAGAACAGTGGGTTGGGGGTCCAAAATCGGAATACTTGGCACTGAAGCCAGACAAAGGTCCCCCTAAAGTGACTCAAGAGAAAGGTGTCATTGTGATTGGAGCAACCCGGTGGGTGGATAATTATAATGTCCCTGTCCACTCTACTGATATTGCTGCTGTTCGTAGAATTTCGAAACGTGTGAGTGGCAGAGGAGGTGGACTTCCTTCAGTCCAAGCAATGGCCCTTACGTATGGTGAATCTGTCACGGAGGTAGCTTGCAATTTGTTGGAACCACAGGAAGTGGGAGGAGATAGGGTTCAGCTTGAAGTTGAGAGGCTTGCAAAGGAAGAAGGTTTGACAGTGGGGAAGGGCTACTTCACTGATCTTTCTCAAGAAAAATTAATCGAAAGCTCCAAGAGAAGAATGCCTTATGTGAGTTCTGTCATATTGAGGCTGATTTACATGTATGCAGTTTTGCCTCGTCAAAGTTTTTGTCACAATGTAAAATTCAAGACCAGAATAAGAAAGCCCCCTCTCCTTGATAGCTCAATTGGTTATATCGCCTTCTCTGTCAGTTCCCCAGAATTAAACAACCAACTTTTAGTAGCAAAGATTCAACCTTGGAGAGAAGAAATGGATTACAACACTGCTTGCAAGGACAAGAAGAAGAAAACCATAGACCAGTCCATGCTGCTCTGCTGCAAGCTCTTCATATCTGAATCACGTAACCTCGCTGTGCTCGACGCCATTGAACATGCCGCTAGGCTTGACCCGGAGTCTGTCATTGTTAACAAATTTGAGGACCGAGCTTACAATAGGGTCCGGTATACTATTGTGTCATATGTTCTGCATGATAGCACAGGAAGTGCTATATACAGCCCCTTGCAGCAAACTGTACTAGCCATGGCTGAGGCAGCATTCGGGGCCATTAACCTCGAACAGCATTCAGGGGCTCACCCTCGCTTAGGGGTTGTCGATGACATTGTGTTCCACCCTTTGGCAAGAGCATCTCTAGATGAAGCAGCTTGGCTTGCTAAGGCTGTGGCAGTGGACATTGGCAATAAATTCCAAGTTCCAGTATATCTATATGCTGCAGCACACCCTACAGGCAAGGCTCTTGACACCATTAGGCGTGAGCTTGGTTACTACAGGCCAAATTTCATGGGCAGCCAATGGGCAGGATGGACCATGCCCGGAGTGCTCCAAGAAAAACCTGATGAAGGCCCGACAACTGTATCTCCTACTCGTGGCATTGCAATGATCGGGGCACGCCCATGGGTTGCCTTGTACAACATACCAATATTGTCCACCGATGTTGCAGCCACTCGAAGGATTGCAAGAATGGTGAGTGCTCGAGGGGGAGGTCTCCCAACCGTGCAAACACTGGGTCTGGTTCATGGTGAGGACTCCACAGAGATAGCTTGTATGCTCTTAGAGCCCAACCAGATTGGAGCAGAGAGAGTCCAGAACCGGGTTGAGATGCTAGCAGCAGAAGAAGGGTTGTACGTAGAGAAGGGTTACTTCACCGATCACTCACCAGATATGGTAATTGAAAAGTATATGAAACTAATATCTGCAGACAGAAACTAG

Protein Analysis

704

Amino Acids

77.86

Weight (kDa)

8.26

Isoelectric Point (pI)

45.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FTCD_N PF07837 28 - 217 2.7e-53 Formiminotransferase domain, N-terminal subdomain
FTCD_N PF07837 406 - 599 5.5e-51 Formiminotransferase domain, N-terminal subdomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 669
AccB7I CCANNNNNTGG 2 cut(s) 763, 1522
AccI GTMKAC 1 cut(s) 1352
AciI CCGC 2 cut(s) 425, 1284
AclWI GGATC 1 cut(s) 363
AcsI RAATTY 5 cut(s) 711, 1031, 1319, 1589, 1681
AcuI CTGAAG 2 cut(s) 608, 735
AcyI GRCGYC 1 cut(s) 1269
AfaI GTAC 4 cut(s) 95, 1422, 1814, 2030
AflIII ACRYGT 2 cut(s) 721, 987
AhdI GACNNNNNGTC 2 cut(s) 316, 1300
AjuI GAANNNNNNNTTGG 2 cut(s) 540, 572
AloI GAACNNNNNNTCC 2 cut(s) 825, 857
Alw21I GWGCWC 4 cut(s) 519, 1266, 1728, 1879
Alw26I GTCTC 2 cut(s) 226, 1895
AlwI GGATC 1 cut(s) 363
Ama87I CYCGRG 1 cut(s) 1878
AoxI GGCC 4 cut(s) 765, 1449, 1676, 1747
ApoI RAATTY 5 cut(s) 711, 1031, 1319, 1589, 1681
ArsI GACNNNNNNTTYG 4 cut(s) 1003, 1035, 1897, 1929
AseI ATTAAT 1 cut(s) 926
AspS9I GGNCC 9 cut(s) 250, 563, 602, 766, 1327, 1345, 1449, 1710, 1748
AsuC2I CCSGG 5 cut(s) 340, 652, 1298, 1719, 1997
AsuHPI GGTGA 7 cut(s) 362, 791, 1472, 1882, 1937, 2041, 2052
AsuII TTCGAA 1 cut(s) 716
AsuNHI GCTAGC 1 cut(s) 2008
AvaI CYCGRG 1 cut(s) 1878
AvaII GGWCC 6 cut(s) 250, 563, 602, 1327, 1345, 1710
BaeGI GKGCMC 2 cut(s) 496, 1795
BaeI ACNNNNGTAYC 2 cut(s) 1743, 1776
BanII GRGCYC 3 cut(s) 519, 1480, 1965
BauI CACGAG 1 cut(s) 1770
BbsI GAAGAC 1 cut(s) 437
Bbv12I GWGCWC 4 cut(s) 519, 1266, 1728, 1879
BbvCI CCTCAGC 1 cut(s) 1434
BccI CCATC 4 cut(s) 250, 262, 394, 1701
BcnI CCSGG 5 cut(s) 340, 652, 1298, 1719, 1997
BcoDI GTCTC 2 cut(s) 226, 1895
BfaI CTAG 7 cut(s) 441, 540, 1287, 1424, 1538, 2009, 2113
BfmI CTRYAG 4 cut(s) 1617, 1629, 1672, 2100
BlpI GCTNAGC 1 cut(s) 147
Bme1390I CCNGG 5 cut(s) 340, 652, 1298, 1719, 1997
Bme18I GGWCC 6 cut(s) 250, 563, 602, 1327, 1345, 1710
BmeRI GACNNNNNGTC 2 cut(s) 316, 1300
BmeT110I CYCGRG 1 cut(s) 1878
BmgT120I GGNCC 9 cut(s) 250, 563, 602, 766, 1327, 1345, 1449, 1710, 1748
BmiI GGNNCC 8 cut(s) 234, 251, 252, 564, 604, 816, 1346, 1450
BmrFI CCNGG 5 cut(s) 340, 652, 1298, 1719, 1997
BmrI ACTGGG 1 cut(s) 1919
BmsI GCATC 2 cut(s) 1541, 1995
BmtI GCTAGC 1 cut(s) 2012
BmuI ACTGGG 1 cut(s) 1919
BoxI GACNNNNGTC 2 cut(s) 255, 600
BpiI GAAGAC 1 cut(s) 437
BpmI CTGGAG 1 cut(s) 146
Bpu10I CCTNAGC 4 cut(s) 421, 1434, 1489, 1560
Bpu1102I GCTNAGC 1 cut(s) 147
Bpu14I TTCGAA 1 cut(s) 716
BpuEI CTTGAG 4 cut(s) 283, 335, 603, 900
BpuMI CCSGG 5 cut(s) 340, 652, 1298, 1719, 1997
BsaAI YACGTR 3 cut(s) 774, 1250, 2032
BsaHI GRCGYC 1 cut(s) 1269
BsaI GGTCTC 1 cut(s) 1895
BsaJI CCNNGG 5 cut(s) 282, 338, 1145, 1428, 1799
BsaWI WCCGGW 1 cut(s) 1347
BsaXI ACNNNNNCTCC 4 cut(s) 825, 855, 1747, 1777
Bse1I ACTGG 4 cut(s) 129, 1207, 1601, 1914
Bse3DI GCAATG 3 cut(s) 768, 1776, 1788
BseDI CCNNGG 5 cut(s) 282, 338, 1145, 1428, 1799
BseGI GGATG 3 cut(s) 273, 334, 1712
BseMI GCAATG 3 cut(s) 768, 1776, 1788
BseMII CTCAG 1 cut(s) 1425
BseNI ACTGG 4 cut(s) 129, 1207, 1601, 1914
BseRI GAGGAG 4 cut(s) 66, 502, 750, 846
BseSI GKGCMC 2 cut(s) 496, 1795
BshFI GGCC 4 cut(s) 767, 1451, 1678, 1749
BsiHKAI GWGCWC 4 cut(s) 519, 1266, 1728, 1879
BsiHKCI CYCGRG 1 cut(s) 1878
BsiSI CCGG 6 cut(s) 340, 652, 1298, 1348, 1719, 1996
BslFI GGGAC 4 cut(s) 243, 263, 588, 659
BsmAI GTCTC 2 cut(s) 226, 1895
BsmFI GGGAC 4 cut(s) 243, 263, 588, 659
BsmI GAATGC 3 cut(s) 954, 1442, 1468
BsnI GGCC 4 cut(s) 767, 1451, 1678, 1749
Bso31I GGTCTC 1 cut(s) 1895
BsoBI CYCGRG 1 cut(s) 1878
Bsp119I TTCGAA 1 cut(s) 716
Bsp1286I GDGCHC 8 cut(s) 496, 519, 1266, 1480, 1728, 1795, 1879, 1965
Bsp1407I TGTACA 2 cut(s) 93, 1812
Bsp143I GATC 4 cut(s) 355, 907, 1785, 2053
Bsp1720I GCTNAGC 1 cut(s) 147
Bsp19I CCATGG 3 cut(s) 282, 1428, 1799
BspACI CCGC 2 cut(s) 425, 1284
BspANI GGCC 4 cut(s) 767, 1451, 1678, 1749
BspCNI CTCAG 1 cut(s) 1426
BspLI GGNNCC 8 cut(s) 234, 251, 252, 564, 604, 816, 1346, 1450
BspMAI CTGCAG 2 cut(s) 1621, 2104
BspOI GCTAGC 1 cut(s) 2012
BspPI GGATC 1 cut(s) 363
BspQI GCTCTTC 1 cut(s) 1238
BspT104I TTCGAA 1 cut(s) 716
BspTNI GGTCTC 1 cut(s) 1895
BsrDI GCAATG 3 cut(s) 768, 1776, 1788
BsrGI TGTACA 2 cut(s) 93, 1812
BsrI ACTGG 4 cut(s) 129, 1207, 1601, 1914
BssECI CCNNGG 5 cut(s) 282, 338, 1145, 1428, 1799
BssMI GATC 4 cut(s) 355, 907, 1785, 2053
BssNAI GTATAC 1 cut(s) 1353
BssNI GRCGYC 1 cut(s) 1269
BssSI CACGAG 1 cut(s) 1770
BssT1I CCWWGG 4 cut(s) 282, 1145, 1428, 1799
Bst1107I GTATAC 1 cut(s) 1353
Bst2BI CACGAG 1 cut(s) 1770
Bst4CI ACNGT 6 cut(s) 326, 552, 886, 1420, 1759, 1900
Bst6I CTCTTC 3 cut(s) 477, 505, 1238
BstACI GRCGYC 1 cut(s) 1269
BstAUI TGTACA 2 cut(s) 93, 1812
BstBAI YACGTR 3 cut(s) 774, 1250, 2032
BstBI TTCGAA 1 cut(s) 716
BstDEI CTNAG 7 cut(s) 147, 225, 421, 1434, 1489, 1560, 1957
BstDSI CCRYGG 3 cut(s) 282, 1428, 1799
BstENI CCTNNNNNAGG 2 cut(s) 1488, 1743
BstF5I GGATG 3 cut(s) 273, 334, 1712
BstKTI GATC 4 cut(s) 358, 910, 1788, 2056
BstMAI GTCTC 2 cut(s) 226, 1895
BstMBI GATC 4 cut(s) 355, 907, 1785, 2053
BstMWI GCNNNNNNNGC 7 cut(s) 278, 410, 1439, 1448, 1556, 1723, 1960
BstNSI RCATGY 2 cut(s) 991, 1283
BstPAI GACNNNNGTC 2 cut(s) 255, 600
BstSCI CCNGG 5 cut(s) 338, 650, 1296, 1717, 1995
BstSFI CTRYAG 4 cut(s) 1617, 1629, 1672, 2100
BstSLI GKGCMC 2 cut(s) 496, 1795
BstSNI TACGTA 2 cut(s) 774, 2032
BstV2I GAAGAC 1 cut(s) 437
BstZ17I GTATAC 1 cut(s) 1353
BsuRI GGCC 4 cut(s) 767, 1451, 1678, 1749
BtgI CCRYGG 3 cut(s) 282, 1428, 1799
BtsCI GGATG 3 cut(s) 273, 334, 1712
BtsI GCAGTG 2 cut(s) 1170, 1578
BtsIMutI CAGTG 9 cut(s) 122, 322, 557, 584, 891, 903, 1170, 1578, 1907
Cfr13I GGNCC 9 cut(s) 250, 563, 602, 766, 1327, 1345, 1449, 1710, 1748
CseI GACGC 1 cut(s) 1277
Csp6I GTAC 4 cut(s) 94, 1421, 1813, 2029
CspCI CAANNNNNGTGG 2 cut(s) 1822, 1857
CviQI GTAC 4 cut(s) 94, 1421, 1813, 2029
DdeI CTNAG 7 cut(s) 147, 225, 421, 1434, 1489, 1560, 1957
DpnI GATC 4 cut(s) 357, 909, 1787, 2055
DpnII GATC 4 cut(s) 355, 907, 1785, 2053
DriI GACNNNNNGTC 2 cut(s) 316, 1300
Eam1104I CTCTTC 3 cut(s) 477, 505, 1238
Eam1105I GACNNNNNGTC 2 cut(s) 316, 1300
EarI CTCTTC 3 cut(s) 477, 505, 1238
Ecl136II GAGCTC 1 cut(s) 517
Eco105I TACGTA 2 cut(s) 774, 2032
Eco130I CCWWGG 4 cut(s) 282, 1145, 1428, 1799
Eco24I GRGCYC 3 cut(s) 519, 1480, 1965
Eco31I GGTCTC 1 cut(s) 1895
Eco47I GGWCC 6 cut(s) 250, 563, 602, 1327, 1345, 1710
Eco53kI GAGCTC 1 cut(s) 517
Eco57I CTGAAG 2 cut(s) 608, 735
Eco88I CYCGRG 1 cut(s) 1878
EcoICRI GAGCTC 1 cut(s) 517
EcoNI CCTNNNNNAGG 2 cut(s) 1488, 1743
EcoO109I RGGNCCY 2 cut(s) 250, 602
EcoT14I CCWWGG 4 cut(s) 282, 1145, 1428, 1799
EcoT38I GRGCYC 3 cut(s) 519, 1480, 1965
ErhI CCWWGG 4 cut(s) 282, 1145, 1428, 1799
FalI AAGNNNNNCTT 6 cut(s) 884, 916, 937, 969, 2030, 2062
FaqI GGGAC 4 cut(s) 243, 263, 588, 659
FauNDI CATATG 1 cut(s) 1366
FblI GTMKAC 1 cut(s) 1352
FokI GGATG 3 cut(s) 280, 321, 1719
FriOI GRGCYC 3 cut(s) 519, 1480, 1965
FspBI CTAG 7 cut(s) 441, 540, 1287, 1424, 1538, 2009, 2113
GsuI CTGGAG 1 cut(s) 146
HaeIII GGCC 4 cut(s) 767, 1451, 1678, 1749
HapII CCGG 6 cut(s) 340, 652, 1298, 1348, 1719, 1996
HgaI GACGC 1 cut(s) 1277
Hin1I GRCGYC 1 cut(s) 1269
HincII GTYRAC 1 cut(s) 1315
HindII GTYRAC 1 cut(s) 1315
HpaI GTTAAC 1 cut(s) 1315
HpaII CCGG 6 cut(s) 340, 652, 1298, 1348, 1719, 1996
HphI GGTGA 7 cut(s) 362, 791, 1472, 1882, 1937, 2041, 2052
Hpy166II GTNNAC 7 cut(s) 94, 682, 743, 1315, 1353, 1576, 1833
Hpy188I TCNGA 4 cut(s) 103, 160, 574, 1243
Hpy188III TCNNGA 6 cut(s) 620, 917, 1036, 1538, 1643, 1990
Hpy8I GTNNAC 7 cut(s) 94, 682, 743, 1315, 1353, 1576, 1833
Hpy99I CGWCG 1 cut(s) 1271
HpyAV CCTTC 9 cut(s) 386, 759, 869, 886, 1099, 1739, 1848, 2015, 2032
HpyCH4III ACNGT 6 cut(s) 326, 552, 886, 1420, 1759, 1900
HpyCH4IV ACGT 4 cut(s) 721, 773, 1249, 2031
HpyF10VI GCNNNNNNNGC 7 cut(s) 278, 410, 1439, 1448, 1556, 1723, 1960
HpyF3I CTNAG 7 cut(s) 147, 225, 421, 1434, 1489, 1560, 1957
HpySE526I ACGT 4 cut(s) 721, 773, 1249, 2031
Hsp92I GRCGYC 1 cut(s) 1269
KflI GGGWCCC 1 cut(s) 250
KspAI GTTAAC 1 cut(s) 1315
Kzo9I GATC 4 cut(s) 355, 907, 1785, 2053
LguI GCTCTTC 1 cut(s) 1238
LmnI GCTCC 6 cut(s) 238, 470, 644, 941, 1731, 1976
LweI GCATC 2 cut(s) 1541, 1995
MaeI CTAG 7 cut(s) 441, 540, 1287, 1424, 1538, 2009, 2113
MaeII ACGT 4 cut(s) 721, 773, 1249, 2031
MaeIII GTNAC 7 cut(s) 521, 613, 787, 1019, 1250, 1667, 2042
MalI GATC 4 cut(s) 357, 909, 1787, 2055
MboI GATC 4 cut(s) 355, 907, 1785, 2053
MfeI CAATTG 2 cut(s) 132, 1074
MhlI GDGCHC 8 cut(s) 496, 519, 1266, 1480, 1728, 1795, 1879, 1965
MlyI GAGTC 6 cut(s) 137, 326, 610, 1310, 1925, 1995
MmeI TCCRAC 2 cut(s) 372, 792
MseI TTAA 6 cut(s) 65, 288, 926, 1112, 1314, 1455
MslI CAYNNNNRTG 2 cut(s) 1781, 1798
MspI CCGG 6 cut(s) 340, 652, 1298, 1348, 1719, 1996
MspR9I CCNGG 5 cut(s) 340, 652, 1298, 1719, 1997
MunI CAATTG 2 cut(s) 132, 1074
Mva1269I GAATGC 3 cut(s) 954, 1442, 1468
MwoI GCNNNNNNNGC 7 cut(s) 278, 410, 1439, 1448, 1556, 1723, 1960
NciI CCSGG 5 cut(s) 340, 652, 1298, 1719, 1997
NcoI CCATGG 3 cut(s) 282, 1428, 1799
NdeI CATATG 1 cut(s) 1366
NdeII GATC 4 cut(s) 355, 907, 1785, 2053
NheI GCTAGC 1 cut(s) 2008
NlaIV GGNNCC 8 cut(s) 234, 251, 252, 564, 604, 816, 1346, 1450
NmuCI GTSAC 3 cut(s) 613, 787, 1019
NspI RCATGY 2 cut(s) 991, 1283
NspV TTCGAA 1 cut(s) 716
PaeR7I CTCGAG 1 cut(s) 1878
PciI ACATGT 1 cut(s) 987
PciSI GCTCTTC 1 cut(s) 1238
PcsI WCGNNNNNNNCGW 2 cut(s) 22, 1263
PctI GAATGC 3 cut(s) 954, 1442, 1468
PfeI GAWTC 5 cut(s) 153, 500, 782, 1138, 1244
PflMI CCANNNNNTGG 2 cut(s) 763, 1522
PleI GAGTC 6 cut(s) 136, 325, 610, 1309, 1925, 1994
PpsI GAGTC 6 cut(s) 136, 325, 610, 1309, 1925, 1994
Ppu21I YACGTR 3 cut(s) 774, 1250, 2032
PpuMI RGGWCCY 2 cut(s) 250, 602
PscI ACATGT 1 cut(s) 987
PshAI GACNNNNGTC 2 cut(s) 255, 600
PshBI ATTAAT 1 cut(s) 926
PsiI TTATAA 1 cut(s) 669
Psp124BI GAGCTC 1 cut(s) 519
Psp5II RGGWCCY 2 cut(s) 250, 602
PspN4I GGNNCC 8 cut(s) 234, 251, 252, 564, 604, 816, 1346, 1450
PspPI GGNCC 9 cut(s) 250, 563, 602, 766, 1327, 1345, 1449, 1710, 1748
PspPPI RGGWCCY 2 cut(s) 250, 602
PspXI VCTCGAGB 1 cut(s) 1878
PstI CTGCAG 2 cut(s) 1621, 2104
RsaI GTAC 4 cut(s) 95, 1422, 1814, 2030
RsaNI GTAC 4 cut(s) 94, 1421, 1813, 2029
RseI CAYNNNNRTG 2 cut(s) 1781, 1798
SacI GAGCTC 1 cut(s) 519
SapI GCTCTTC 1 cut(s) 1238
SaqAI TTAA 6 cut(s) 65, 288, 926, 1112, 1314, 1455
Sau3AI GATC 4 cut(s) 355, 907, 1785, 2053
Sau96I GGNCC 9 cut(s) 250, 563, 602, 766, 1327, 1345, 1449, 1710, 1748
SchI GAGTC 6 cut(s) 137, 326, 610, 1310, 1925, 1995
ScrFI CCNGG 5 cut(s) 340, 652, 1298, 1719, 1997
SduI GDGCHC 8 cut(s) 496, 519, 1266, 1480, 1728, 1795, 1879, 1965
SfaNI GCATC 2 cut(s) 1541, 1995
SfcI CTRYAG 4 cut(s) 1617, 1629, 1672, 2100
Sfr274I CTCGAG 1 cut(s) 1878
SfuI TTCGAA 1 cut(s) 716
SinI GGWCC 6 cut(s) 250, 563, 602, 1327, 1345, 1710
SlaI CTCGAG 1 cut(s) 1878
SmiMI CAYNNNNRTG 2 cut(s) 1781, 1798
SmlI CTYRAG 5 cut(s) 262, 314, 618, 915, 1878
SmoI CTYRAG 5 cut(s) 262, 314, 618, 915, 1878
SnaBI TACGTA 2 cut(s) 774, 2032
SsiI CCGC 2 cut(s) 425, 1284
SspI AATATT 1 cut(s) 1827
SspMI CTAG 7 cut(s) 441, 540, 1287, 1424, 1538, 2009, 2113
SstI GAGCTC 1 cut(s) 519
StyD4I CCNGG 5 cut(s) 338, 650, 1296, 1717, 1995
StyI CCWWGG 4 cut(s) 282, 1145, 1428, 1799
TaaI ACNGT 6 cut(s) 326, 552, 886, 1420, 1759, 1900
TaiI ACGT 4 cut(s) 724, 776, 1252, 2034
TaqI TCGA 8 cut(s) 25, 716, 930, 1266, 1461, 1500, 1852, 1879
TaqII GACCGA 1 cut(s) 1344
TatI WGTACW 3 cut(s) 93, 1420, 1812
TauI GCSGC 2 cut(s) 428, 1286
TfiI GAWTC 5 cut(s) 153, 500, 782, 1138, 1244
Tru1I TTAA 6 cut(s) 65, 288, 926, 1112, 1314, 1455
Tru9I TTAA 6 cut(s) 65, 288, 926, 1112, 1314, 1455
TscAI CASTG 9 cut(s) 129, 329, 557, 591, 891, 910, 1177, 1578, 1914
TseFI GTSAC 3 cut(s) 613, 787, 1019
Tsp45I GTSAC 3 cut(s) 613, 787, 1019
TspDTI ATGAA 9 cut(s) 17, 204, 495, 1225, 1557, 1675, 1758, 1910, 2102
TspGWI ACGGA 1 cut(s) 806
TspRI CASTG 9 cut(s) 129, 329, 557, 591, 891, 910, 1177, 1578, 1914
Van91I CCANNNNNTGG 2 cut(s) 763, 1522
VpaK11BI GGWCC 6 cut(s) 250, 563, 602, 1327, 1345, 1710
VspI ATTAAT 1 cut(s) 926
XagI CCTNNNNNAGG 2 cut(s) 1488, 1743
XapI RAATTY 5 cut(s) 711, 1031, 1319, 1589, 1681
XbaI TCTAGA 1 cut(s) 1537
XceI RCATGY 2 cut(s) 991, 1283
XhoI CTCGAG 1 cut(s) 1878
XmiI GTMKAC 1 cut(s) 1352
XspI CTAG 7 cut(s) 441, 540, 1287, 1424, 1538, 2009, 2113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.