Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0001042

Physical Location & Seq

Genomic Coordinates Forward (+)

78970452 .. 78972842

Gene Structure 2391 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG612000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGGCCTGGTGTAGGCGGCACTGCAAAACAATATTGGAAGGTTTTGCAACCAGAAAAGCAGCGGCTGCGGCGGCTACGTTAACGTTAGCAAGCAACTGGAAGAATGAGACGAAGAAAATTAGCTTGTTTTCAGAATTCATAAGAAGAAATTCTTCTACTTTAGCAACACTTGAGGCAGAGGAGAAAAAGAAGAAAGGAATCATGGAAGAAGAAAGCTTTAAGTATAAGTCACTCTATTTATGTTTCGAGGAGTACACTAACGACAATGCTCATGTTATTCAATCCATCAGATTAAGCCATCTGTTGGCACCACCAGTACATGGCAGCGATGATCTGAAATTACAGAGAGTTGCTTATAGATGTGGACCGGATACTGTTGTTCCCCTAGATGTGAGTACTGGCGTCGTCGGCTCCAAAATTATTCTCTTTGGTGGTAAGGTTTTTCCTCCGGTACGACATCATCATATTTTTGAATATTCACTAAGCAAAGAAGTTTGTGTGTTTGAGACAGATCCAAGCATAGATCCAAACCCGGAATTGCAGCCTTCCCAAGTTTTTAAGATTAGTAGACGTGAACCTGTTTTAGTAGAGATGGACGACAAACTTTATCGTTTCGGTGGTCGGTGTGACTGTGAATCATTCGAGGTATTTGAACCAATACAGGATGACTGGTTGCCTCTGGATGCGCCTCCTCGGAAGTATCCCTACGGCTTCACTCATGCAATTGCAGGCACCAAAATCCTACTCTGGGGCAGAAATCAGACCGGAGTGTACATGTTTGACGCGACCCATCCGGAAAAAGGATGGACAGAATTAGACCCTTGTTTGGGAAGCTATATTCCCTCTATTGATGGTTATGATCAACTATTTGTCAAGTTGAAGTTTCGTCCTGGTGATGGTGAGGGTTTCCTAATGTTCTCCATTAATTTGGAACAACCTCATACGGTACTAGCCTTCCACATGTCTTGTACATGTGATTCCTTAAAACCTATGGAACCTCTGCAGCTGCCAGAATGGCCTCCAAAATTTCATAGTCCAGATCCAAAACTTCATTGTCCAGATCGATGTCTGTTTTTTCACCTTGGAGGGCAAAAAGTCGGTCTTGTTTTCTCCCGTGATTCATTACCTGAGGATACATTACGTGATTACTATTATGATCATTATGATTTCCCTTCTGATTATGATGACGAGGATAATGAAGATAACGAAGATGATGATAAAGACAACAAAGACGATGGCCATAATAATGATAATCACGACGCCTCTGACAATGTTAATTATGATTGCCTTGAGGATAGTGACAAGGTGAGAGTTCTTGTCATAATCTTTGAATACGAAATTGCTGAGGAATCCATGGACATCAAATACAAGTTGCTTAGTACTCGCTGCCTTAAATACTCTTCCAAGAATCTTGAAGAAGAATCTCGGGCTGGTACCTCACAACTGATAGGTGCCCATGTGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00020 ko00190 ko01100 ko01110 ko01120 ko01130 ko01200 ko03015 ko03040 ko04714 ko04932 ko05010 ko05012 ko05016 map00020 map00190 map01100 map01110 map01120 map01130 map01200 map03015 map03040 map04714 map04932 map05010 map05012 map05016

Pfam Domains

Protein Families

RRM_1

Protein Analysis

488

Amino Acids

55.88

Weight (kDa)

5.08

Isoelectric Point (pI)

47.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001042)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g43023 FvH4_4g00821 FvH4_6g46861 FvH4_6g50642 FvH4_6g50762 FvH4_6g50763
rosa_chinensis	RchiOBHm_Chr2g0172011
rosa_laevigata	RLG00000019866 RLG00000021935 RLG00000021943 RLG00000022032 RLG00000022034 RLG00000022036 RLG00000022038 RLG00000022040 RLG00000022042 RLG00000022044 RLG00000022046 RLG00000022049 RLG00000022051 RLG00000022068 RLG00000022070 RLG00000022080 RLG00000022083 RLG00000022086 RLG00000034562
rosa_multiflora	Rmu_sc0008262.1_g000002 Rmu_sc0012445.1_g000001 Rmu_sc0012468.1_g000010 Rmu_sc0036915.1_g000001 Rmu_ssc0000252.1_g000031 Rmu_ssc0000252.1_g000036 Rmu_ssc0000252.1_g000040
rosa_roxburghii	Rroxscaffold_2G00080270 Rroxscaffold_2G00080490
rosa_rugosa	Rorug02G0547700 Rorug02G0555600 Rorug02G0555600 Rorug02G0555700 Rorug02G0556100
rosa_samantha	Rh2BG643700 Rh2BG644000 Rh2BG644100 Rh2BG644500 Rh2BG644600 Rh2BG645800 Rh2CG610600 Rh2CG610800 Rh2CG611200 Rh2CG611500 Rh2CG611700 Rh2CG612000 Rh2DG658500 Rh2DG658800 Rh2DG658900 Rh2DG659100 Rh2DG659400 Rh2DG659700 Rh2DG660000 Rh4BG019700 Rh5BG331700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1433
AccB1I	GGYRCC	4 cut(s)	307, 731, 1433, 1451
AccB7I	CCANNNNNTGG	2 cut(s)	304, 320
AccI	GTMKAC	1 cut(s)	568
AccII	CGCG	1 cut(s)	785
AccIII	TCCGGA	1 cut(s)	793
AciI	CCGC	4 cut(s)	16, 62, 68, 71
AclI	AACGTT	1 cut(s)	83
AclWI	GGATC	3 cut(s)	506, 518, 1034
AcoI	YGGCCR	1 cut(s)	1237
AcsI	RAATTY	3 cut(s)	134, 148, 1025
AcyI	GRCGYC	2 cut(s)	402, 1260
AfaI	GTAC	9 cut(s)	254, 318, 397, 453, 773, 948, 970, 1381, 1435
AfiI	CCNNNNNNNGG	8 cut(s)	12, 304, 320, 748, 800, 826, 827, 896
AflIII	ACRYGT	3 cut(s)	774, 960, 971
AgsI	TTSAA	6 cut(s)	281, 473, 653, 880, 1331, 1415
AjiI	CACGTC	1 cut(s)	572
AjnI	CCWGG	2 cut(s)	5, 889
AluBI	AGCT	4 cut(s)	123, 216, 834, 1006
AluI	AGCT	4 cut(s)	123, 216, 834, 1006
Alw26I	GTCTC	2 cut(s)	101, 500
AlwI	GGATC	3 cut(s)	506, 518, 1034
AlwNI	CAGNNNCTG	1 cut(s)	65
Ama87I	CYCGRG	1 cut(s)	1425
Aor13HI	TCCGGA	1 cut(s)	793
AoxI	GGCC	3 cut(s)	3, 1016, 1237
ApeKI	GCWGC	7 cut(s)	59, 65, 324, 541, 1003, 1006, 1386
ApoI	RAATTY	3 cut(s)	134, 148, 1025
ArsI	GACNNNNNNTTYG	2 cut(s)	1084, 1116
AseI	ATTAAT	1 cut(s)	924
Asp700I	GAANNNNTTC	2 cut(s)	148, 151
Asp718I	GGTACC	1 cut(s)	1433
AspLEI	GCGC	1 cut(s)	688
AspS9I	GGNCC	1 cut(s)	365
AsuC2I	CCSGG	1 cut(s)	533
AsuHPI	GGTGA	4 cut(s)	905, 911, 1070, 1318
AvaI	CYCGRG	1 cut(s)	1425
AvaII	GGWCC	1 cut(s)	365
AxyI	CCTNAGG	1 cut(s)	1128
BaeGI	GKGCMC	1 cut(s)	1456
BaeI	ACNNNNGTAYC	2 cut(s)	363, 396
BalI	TGGCCA	1 cut(s)	1239
BanI	GGYRCC	4 cut(s)	307, 731, 1433, 1451
BarI	GAAGNNNNNNTAC	2 cut(s)	689, 721
BbvCI	CCTCAGC	1 cut(s)	1344
BbvI	GCAGC	7 cut(s)	52, 71, 336, 553, 993, 1015, 1373
BccI	CCATC	8 cut(s)	293, 306, 586, 798, 798, 845, 890, 1229
BceAI	ACGGC	1 cut(s)	724
BciT130I	CCWGG	2 cut(s)	7, 891
BciVI	GTATCC	3 cut(s)	364, 711, 1126
BclI	TGATCA	2 cut(s)	859, 1156
BcnI	CCSGG	1 cut(s)	533
BcoDI	GTCTC	2 cut(s)	101, 500
BfaI	CTAG	2 cut(s)	386, 950
BfmI	CTRYAG	1 cut(s)	1001
BfuI	GTATCC	3 cut(s)	364, 711, 1126
BglI	GCCNNNNNGGC	1 cut(s)	1015
BmcAI	AGTACT	2 cut(s)	397, 1381
Bme1390I	CCNGG	3 cut(s)	7, 533, 891
Bme18I	GGWCC	1 cut(s)	365
BmeT110I	CYCGRG	1 cut(s)	1425
BmgBI	CACGTC	1 cut(s)	572
BmgT120I	GGNCC	1 cut(s)	365
BmiI	GGNNCC	6 cut(s)	309, 412, 733, 996, 1435, 1453
BmrFI	CCNGG	3 cut(s)	7, 533, 891
BmsI	GCATC	1 cut(s)	673
Bpu10I	CCTNAGC	1 cut(s)	1344
BpuEI	CTTGAG	2 cut(s)	191, 1310
BpuMI	CCSGG	1 cut(s)	533
Bsa29I	ATCGAT	1 cut(s)	1063
BsaAI	YACGTR	1 cut(s)	1142
BsaHI	GRCGYC	2 cut(s)	402, 1260
BsaJI	CCNNGG	3 cut(s)	692, 1081, 1353
BsaWI	WCCGGW	4 cut(s)	367, 448, 764, 793
Bsc4I	CCNNNNNNNGG	8 cut(s)	12, 304, 320, 748, 800, 826, 827, 896
Bse1I	ACTGG	4 cut(s)	101, 314, 403, 674
Bse21I	CCTNAGG	1 cut(s)	1128
BseAI	TCCGGA	1 cut(s)	793
BseBI	CCWGG	2 cut(s)	7, 891
BseCI	ATCGAT	1 cut(s)	1063
BseDI	CCNNGG	3 cut(s)	692, 1081, 1353
BseGI	GGATG	4 cut(s)	670, 688, 790, 809
BseLI	CCNNNNNNNGG	8 cut(s)	12, 304, 320, 748, 800, 826, 827, 896
BseMII	CTCAG	2 cut(s)	1119, 1335
BseNI	ACTGG	4 cut(s)	101, 314, 403, 674
BseRI	GAGGAG	3 cut(s)	194, 263, 681
BseSI	GKGCMC	1 cut(s)	1456
BseXI	GCAGC	7 cut(s)	52, 71, 336, 553, 993, 1015, 1373
Bsh1236I	CGCG	1 cut(s)	785
BshFI	GGCC	3 cut(s)	5, 1018, 1239
BshNI	GGYRCC	4 cut(s)	307, 731, 1433, 1451
BshVI	ATCGAT	1 cut(s)	1063
BsiHKCI	CYCGRG	1 cut(s)	1425
BsiSI	CCGG	5 cut(s)	368, 449, 533, 765, 794
BslI	CCNNNNNNNGG	8 cut(s)	12, 304, 320, 748, 800, 826, 827, 896
BsmAI	GTCTC	2 cut(s)	101, 500
BsmBI	CGTCTC	1 cut(s)	101
BsnI	GGCC	3 cut(s)	5, 1018, 1239
BsoBI	CYCGRG	1 cut(s)	1425
Bsp1286I	GDGCHC	1 cut(s)	1456
Bsp13I	TCCGGA	1 cut(s)	793
Bsp1407I	TGTACA	2 cut(s)	771, 968
Bsp143I	GATC	7 cut(s)	331, 511, 523, 859, 1039, 1060, 1156
Bsp19I	CCATGG	1 cut(s)	1353
BspACI	CCGC	4 cut(s)	16, 62, 68, 71
BspANI	GGCC	3 cut(s)	5, 1018, 1239
BspCNI	CTCAG	2 cut(s)	1120, 1336
BspDI	ATCGAT	1 cut(s)	1063
BspEI	TCCGGA	1 cut(s)	793
BspFNI	CGCG	1 cut(s)	785
BspLI	GGNNCC	6 cut(s)	309, 412, 733, 996, 1435, 1453
BspMAI	CTGCAG	1 cut(s)	1005
BspPI	GGATC	3 cut(s)	506, 518, 1034
BspT107I	GGYRCC	4 cut(s)	307, 731, 1433, 1451
BsrGI	TGTACA	2 cut(s)	771, 968
BsrI	ACTGG	4 cut(s)	101, 314, 403, 674
BssECI	CCNNGG	3 cut(s)	692, 1081, 1353
BssMI	GATC	7 cut(s)	331, 511, 523, 859, 1039, 1060, 1156
BssNI	GRCGYC	2 cut(s)	402, 1260
BssT1I	CCWWGG	2 cut(s)	1081, 1353
Bst2UI	CCWGG	2 cut(s)	7, 891
Bst4CI	ACNGT	3 cut(s)	376, 632, 946
Bst6I	CTCTTC	1 cut(s)	1405
BstACI	GRCGYC	2 cut(s)	402, 1260
BstAPI	GCANNNNNTGC	1 cut(s)	65
BstAUI	TGTACA	2 cut(s)	771, 968
BstBAI	YACGTR	1 cut(s)	1142
BstC8I	GCNNGC	2 cut(s)	91, 730
BstDEI	CTNAG	4 cut(s)	482, 1128, 1344, 1376
BstDSI	CCRYGG	1 cut(s)	1353
BstENI	CCTNNNNNAGG	1 cut(s)	10
BstF5I	GGATG	4 cut(s)	670, 688, 790, 809
BstFNI	CGCG	1 cut(s)	785
BstHHI	GCGC	1 cut(s)	688
BstKTI	GATC	7 cut(s)	334, 514, 526, 862, 1042, 1063, 1159
BstMAI	GTCTC	2 cut(s)	101, 500
BstMBI	GATC	7 cut(s)	331, 511, 523, 859, 1039, 1060, 1156
BstMWI	GCNNNNNNNGC	5 cut(s)	65, 68, 71, 408, 1015
BstNI	CCWGG	2 cut(s)	7, 891
BstNSI	RCATGY	3 cut(s)	778, 964, 975
BstSCI	CCNGG	3 cut(s)	5, 531, 889
BstSFI	CTRYAG	1 cut(s)	1001
BstSLI	GKGCMC	1 cut(s)	1456
BstUI	CGCG	1 cut(s)	785
BstV1I	GCAGC	7 cut(s)	52, 71, 336, 553, 993, 1015, 1373
BstX2I	RGATCY	3 cut(s)	511, 523, 1039
BstXI	CCANNNNNNTGG	1 cut(s)	928
BstYI	RGATCY	3 cut(s)	511, 523, 1039
Bsu15I	ATCGAT	1 cut(s)	1063
Bsu36I	CCTNAGG	1 cut(s)	1128
BsuI	GTATCC	3 cut(s)	364, 711, 1126
BsuRI	GGCC	3 cut(s)	5, 1018, 1239
BsuTUI	ATCGAT	1 cut(s)	1063
BtgI	CCRYGG	1 cut(s)	1353
BtgZI	GCGATG	1 cut(s)	342
BtrI	CACGTC	1 cut(s)	572
BtsCI	GGATG	4 cut(s)	670, 688, 790, 809
BtsI	GCAGTG	1 cut(s)	19
BtsIMutI	CAGTG	1 cut(s)	19
Cac8I	GCNNGC	2 cut(s)	91, 730
CaiI	CAGNNNCTG	1 cut(s)	65
CfoI	GCGC	1 cut(s)	688
Cfr13I	GGNCC	1 cut(s)	365
ClaI	ATCGAT	1 cut(s)	1063
CseI	GACGC	3 cut(s)	391, 791, 1268
Csp6I	GTAC	9 cut(s)	253, 317, 396, 452, 772, 947, 969, 1380, 1434
CspCI	CAANNNNNGTGG	2 cut(s)	947, 982
CviAII	CATG	9 cut(s)	202, 272, 320, 719, 775, 961, 972, 1354, 1457
CviQI	GTAC	9 cut(s)	253, 317, 396, 452, 772, 947, 969, 1380, 1434
DdeI	CTNAG	4 cut(s)	482, 1128, 1344, 1376
DpnI	GATC	7 cut(s)	333, 513, 525, 861, 1041, 1062, 1158
DpnII	GATC	7 cut(s)	331, 511, 523, 859, 1039, 1060, 1156
EaeI	YGGCCR	1 cut(s)	1237
Eam1104I	CTCTTC	1 cut(s)	1405
EarI	CTCTTC	1 cut(s)	1405
Eco130I	CCWWGG	2 cut(s)	1081, 1353
Eco47I	GGWCC	1 cut(s)	365
Eco81I	CCTNAGG	1 cut(s)	1128
Eco88I	CYCGRG	1 cut(s)	1425
EcoNI	CCTNNNNNAGG	1 cut(s)	10
EcoRI	GAATTC	1 cut(s)	134
EcoRII	CCWGG	2 cut(s)	5, 889
EcoT14I	CCWWGG	2 cut(s)	1081, 1353
ErhI	CCWWGG	2 cut(s)	1081, 1353
Esp3I	CGTCTC	1 cut(s)	101
FaeI	CATG	9 cut(s)	205, 275, 323, 722, 778, 964, 975, 1357, 1460
FalI	AAGNNNNNCTT	4 cut(s)	136, 168, 1086, 1118
FatI	CATG	9 cut(s)	201, 271, 319, 718, 774, 960, 971, 1353, 1456
FbaI	TGATCA	2 cut(s)	859, 1156
FblI	GTMKAC	1 cut(s)	568
FokI	GGATG	4 cut(s)	677, 695, 777, 816
FspBI	CTAG	2 cut(s)	386, 950
GlaI	GCGC	1 cut(s)	687
HaeIII	GGCC	3 cut(s)	5, 1018, 1239
HapII	CCGG	5 cut(s)	368, 449, 533, 765, 794
HgaI	GACGC	3 cut(s)	391, 791, 1268
HhaI	GCGC	1 cut(s)	688
Hin1I	GRCGYC	2 cut(s)	402, 1260
Hin1II	CATG	9 cut(s)	205, 275, 323, 722, 778, 964, 975, 1357, 1460
Hin6I	GCGC	1 cut(s)	686
HinP1I	GCGC	1 cut(s)	686
HincII	GTYRAC	1 cut(s)	81
HindII	GTYRAC	1 cut(s)	81
HindIII	AAGCTT	1 cut(s)	214
HinfI	GANTC	7 cut(s)	198, 635, 977, 1118, 1349, 1408, 1421
HpaI	GTTAAC	1 cut(s)	81
HpaII	CCGG	5 cut(s)	368, 449, 533, 765, 794
HphI	GGTGA	4 cut(s)	905, 911, 1070, 1318
Hpy166II	GTNNAC	6 cut(s)	81, 255, 365, 569, 575, 772
Hpy188I	TCNGA	7 cut(s)	133, 290, 336, 696, 762, 1177, 1267
Hpy188III	TCNNGA	6 cut(s)	680, 794, 1037, 1058, 1256, 1412
Hpy8I	GTNNAC	6 cut(s)	81, 255, 365, 569, 575, 772
Hpy99I	CGWCG	3 cut(s)	407, 410, 1262
HpyAV	CCTTC	4 cut(s)	32, 555, 964, 1182
HpyCH4III	ACNGT	3 cut(s)	376, 632, 946
HpyCH4IV	ACGT	4 cut(s)	77, 83, 571, 1141
HpyCH4V	TGCA	6 cut(s)	24, 47, 541, 722, 728, 1003
HpyF10VI	GCNNNNNNNGC	5 cut(s)	65, 68, 71, 408, 1015
HpyF3I	CTNAG	4 cut(s)	482, 1128, 1344, 1376
HpySE526I	ACGT	4 cut(s)	77, 83, 571, 1141
Hsp92I	GRCGYC	2 cut(s)	402, 1260
Hsp92II	CATG	9 cut(s)	205, 275, 323, 722, 778, 964, 975, 1357, 1460
HspAI	GCGC	1 cut(s)	686
Kpn2I	TCCGGA	1 cut(s)	793
KpnI	GGTACC	1 cut(s)	1437
Ksp22I	TGATCA	2 cut(s)	859, 1156
KspAI	GTTAAC	1 cut(s)	81
Kzo9I	GATC	7 cut(s)	331, 511, 523, 859, 1039, 1060, 1156
LmnI	GCTCC	1 cut(s)	416
Lsp1109I	GCAGC	7 cut(s)	52, 71, 336, 553, 993, 1015, 1373
LweI	GCATC	1 cut(s)	673
MaeI	CTAG	2 cut(s)	386, 950
MaeII	ACGT	4 cut(s)	77, 83, 571, 1141
MaeIII	GTNAC	3 cut(s)	228, 626, 1298
MalI	GATC	7 cut(s)	333, 513, 525, 861, 1041, 1062, 1158
MboI	GATC	7 cut(s)	331, 511, 523, 859, 1039, 1060, 1156
MfeI	CAATTG	1 cut(s)	723
MflI	RGATCY	3 cut(s)	511, 523, 1039
MhlI	GDGCHC	1 cut(s)	1456
MlsI	TGGCCA	1 cut(s)	1239
MluNI	TGGCCA	1 cut(s)	1239
Mox20I	TGGCCA	1 cut(s)	1239
MroI	TCCGGA	1 cut(s)	793
MroXI	GAANNNNTTC	2 cut(s)	148, 151
MscI	TGGCCA	1 cut(s)	1239
MseI	TTAA	8 cut(s)	80, 219, 293, 558, 924, 983, 1275, 1392
MslI	CAYNNNNRTG	1 cut(s)	1245
Msp20I	TGGCCA	1 cut(s)	1239
MspA1I	CMGCKG	2 cut(s)	62, 1006
MspI	CCGG	5 cut(s)	368, 449, 533, 765, 794
MspR9I	CCNGG	3 cut(s)	7, 533, 891
MunI	CAATTG	1 cut(s)	723
MvaI	CCWGG	2 cut(s)	7, 891
MvnI	CGCG	1 cut(s)	785
MwoI	GCNNNNNNNGC	5 cut(s)	65, 68, 71, 408, 1015
NciI	CCSGG	1 cut(s)	533
NcoI	CCATGG	1 cut(s)	1353
NdeII	GATC	7 cut(s)	331, 511, 523, 859, 1039, 1060, 1156
NlaIII	CATG	9 cut(s)	205, 275, 323, 722, 778, 964, 975, 1357, 1460
NlaIV	GGNNCC	6 cut(s)	309, 412, 733, 996, 1435, 1453
NmuCI	GTSAC	3 cut(s)	228, 626, 1298
NspI	RCATGY	3 cut(s)	778, 964, 975
PciI	ACATGT	3 cut(s)	774, 960, 971
PdmI	GAANNNNTTC	2 cut(s)	148, 151
PfeI	GAWTC	7 cut(s)	198, 635, 977, 1118, 1349, 1408, 1421
PflMI	CCANNNNNTGG	2 cut(s)	304, 320
Ppu21I	YACGTR	1 cut(s)	1142
PscI	ACATGT	3 cut(s)	774, 960, 971
PshBI	ATTAAT	1 cut(s)	924
Psp1406I	AACGTT	1 cut(s)	83
Psp6I	CCWGG	2 cut(s)	5, 889
PspGI	CCWGG	2 cut(s)	5, 889
PspN4I	GGNNCC	6 cut(s)	309, 412, 733, 996, 1435, 1453
PspPI	GGNCC	1 cut(s)	365
PstI	CTGCAG	1 cut(s)	1005
PstNI	CAGNNNCTG	1 cut(s)	65
PsuI	RGATCY	3 cut(s)	511, 523, 1039
PvuII	CAGCTG	1 cut(s)	1006
RsaI	GTAC	9 cut(s)	254, 318, 397, 453, 773, 948, 970, 1381, 1435
RsaNI	GTAC	9 cut(s)	253, 317, 396, 452, 772, 947, 969, 1380, 1434
RseI	CAYNNNNRTG	1 cut(s)	1245
SaqAI	TTAA	8 cut(s)	80, 219, 293, 558, 924, 983, 1275, 1392
Sau3AI	GATC	7 cut(s)	331, 511, 523, 859, 1039, 1060, 1156
Sau96I	GGNCC	1 cut(s)	365
ScaI	AGTACT	2 cut(s)	397, 1381
ScrFI	CCNGG	3 cut(s)	7, 533, 891
SduI	GDGCHC	1 cut(s)	1456
SfaNI	GCATC	1 cut(s)	673
SfcI	CTRYAG	1 cut(s)	1001
SinI	GGWCC	1 cut(s)	365
SmiMI	CAYNNNNRTG	1 cut(s)	1245
SmlI	CTYRAG	2 cut(s)	170, 1289
SmoI	CTYRAG	2 cut(s)	170, 1289
SsiI	CCGC	4 cut(s)	16, 62, 68, 71
SspI	AATATT	2 cut(s)	33, 476
SspMI	CTAG	2 cut(s)	386, 950
StyD4I	CCNGG	3 cut(s)	5, 531, 889
StyI	CCWWGG	2 cut(s)	1081, 1353
TaaI	ACNGT	3 cut(s)	376, 632, 946
TaiI	ACGT	4 cut(s)	80, 86, 574, 1144
TaqI	TCGA	3 cut(s)	246, 642, 1063
TaqII	GACCGA	1 cut(s)	1088
TatI	WGTACW	6 cut(s)	252, 316, 395, 771, 968, 1379
TauI	GCSGC	4 cut(s)	19, 65, 71, 74
TfiI	GAWTC	7 cut(s)	198, 635, 977, 1118, 1349, 1408, 1421
Tru1I	TTAA	8 cut(s)	80, 219, 293, 558, 924, 983, 1275, 1392
Tru9I	TTAA	8 cut(s)	80, 219, 293, 558, 924, 983, 1275, 1392
TscAI	CASTG	1 cut(s)	26
TseFI	GTSAC	3 cut(s)	228, 626, 1298
TseI	GCWGC	7 cut(s)	59, 65, 324, 541, 1003, 1006, 1386
Tsp45I	GTSAC	3 cut(s)	228, 626, 1298
TspDTI	ATGAA	5 cut(s)	127, 1019, 1040, 1110, 1212
TspRI	CASTG	1 cut(s)	26
Van91I	CCANNNNNTGG	2 cut(s)	304, 320
VpaK11BI	GGWCC	1 cut(s)	365
VspI	ATTAAT	1 cut(s)	924
XagI	CCTNNNNNAGG	1 cut(s)	10
XapI	RAATTY	3 cut(s)	134, 148, 1025
XceI	RCATGY	3 cut(s)	778, 964, 975
XmiI	GTMKAC	1 cut(s)	568
XmnI	GAANNNNTTC	2 cut(s)	148, 151
XspI	CTAG	2 cut(s)	386, 950
ZrmI	AGTACT	2 cut(s)	397, 1381

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.