Rh2AG145200

BAH and coiled-coil domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000878
Physical Location & Seq
Forward (+)
13264096 .. 13266408
2313 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG145200.1

Sequence Viewer

Length: 462 bp
ATGACCCGTGACCGGCACTTCCGGAGGAGATATGTTTCGGAAATCCCAAAACTGGGGAAGTATCAGTTTCGGAGGAAGGCAGAGGCAATCGAAAGAAAAACAAAAACAGGAGGGCAGTTCCATGTATCCAAAGGGCTCTTCTTGTCTGATCACTATGATGTTCAGAGTGCTAATACCATTGAGGGAAAGTGTGTGGTTCACTCGTTCAAGAACTACACGCAGCTCGAAAATGTGGGAGCTGAGTATTACTACTGTAGATTTGAGAACAAGGCTGCTACTGGGGCTTTTACTTCTGATAGAGTTGCTATGTATTGCGAGTCTGAGATGCCGTATAACCTGGATGACCTCATGGTGCAGTGTGAGGAGTGCAAAGACTGGTGGACCCTAAGCGCCAAAAGAAATTACTTAAATTGCAAGAGGCGATACAAAATGCAGTGCTGCTGTTACTGGATCAATATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005694 GO:0006323 GO:0006325 GO:0006333 GO:0006338 GO:0006342 GO:0006355 GO:0006996 GO:0007275 GO:0008150 GO:0009791 GO:0009845 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010639 GO:0016043 GO:0016458 GO:0017053 GO:0019219 GO:0019222 GO:0022607 GO:0031056 GO:0031057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031399 GO:0031400 GO:0031497 GO:0031507 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0035064 GO:0035065 GO:0035067 GO:0040029 GO:0042393 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044085 GO:0044212 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070828 GO:0071103 GO:0071840 GO:0080090 GO:0090351 GO:0090568 GO:0097159 GO:0140030 GO:0140034 GO:1901363 GO:1901983 GO:1901984 GO:1902275 GO:1902679 GO:1903506 GO:1903507 GO:1905268 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2000756 GO:2000757 GO:2001141 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAH PHD

Protein Analysis

153

Amino Acids

18.3

Weight (kDa)

9.02

Isoelectric Point (pI)

52.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 21
AclWI GGATC 1 cut(s) 458
AfiI CCNNNNNNNGG 3 cut(s) 12, 52, 53
AgsI TTSAA 1 cut(s) 208
AjnI CCWGG 1 cut(s) 336
AjuI GAANNNNNNNTTGG 2 cut(s) 122, 154
AluBI AGCT 2 cut(s) 223, 239
AluI AGCT 2 cut(s) 223, 239
AlwI GGATC 1 cut(s) 458
Aor13HI TCCGGA 1 cut(s) 21
ApeKI GCWGC 3 cut(s) 220, 272, 438
AspLEI GCGC 1 cut(s) 392
AspS9I GGNCC 1 cut(s) 381
AvaII GGWCC 1 cut(s) 381
BanII GRGCYC 1 cut(s) 138
BbvI GCAGC 3 cut(s) 232, 259, 425
BceAI ACGGC 1 cut(s) 313
BciT130I CCWGG 1 cut(s) 338
BciVI GTATCC 1 cut(s) 136
BclI TGATCA 1 cut(s) 148
BfmI CTRYAG 1 cut(s) 253
BfoI RGCGCY 1 cut(s) 393
BfuI GTATCC 1 cut(s) 136
BisI GCNGC 3 cut(s) 221, 273, 439
BlsI GCNGC 3 cut(s) 222, 274, 440
Bme1390I CCNGG 1 cut(s) 338
Bme18I GGWCC 1 cut(s) 381
BmgT120I GGNCC 1 cut(s) 381
BmiI GGNNCC 1 cut(s) 383
BmrFI CCNGG 1 cut(s) 338
BmrI ACTGGG 2 cut(s) 62, 288
BmsI GCATC 1 cut(s) 315
BmuI ACTGGG 2 cut(s) 62, 288
Bpu10I CCTNAGC 1 cut(s) 386
BsaWI WCCGGW 1 cut(s) 21
Bsc4I CCNNNNNNNGG 3 cut(s) 12, 52, 53
Bse118I RCCGGY 1 cut(s) 12
Bse1I ACTGG 4 cut(s) 57, 283, 380, 452
BseAI TCCGGA 1 cut(s) 21
BseBI CCWGG 1 cut(s) 338
BseGI GGATG 1 cut(s) 346
BseLI CCNNNNNNNGG 3 cut(s) 12, 52, 53
BseMII CTCAG 2 cut(s) 231, 312
BseNI ACTGG 4 cut(s) 57, 283, 380, 452
BseRI GAGGAG 2 cut(s) 40, 377
BseXI GCAGC 3 cut(s) 232, 259, 425
BsgI GTGCAG 1 cut(s) 374
BsiSI CCGG 2 cut(s) 13, 22
BslI CCNNNNNNNGG 3 cut(s) 12, 52, 53
Bsp1286I GDGCHC 1 cut(s) 138
Bsp13I TCCGGA 1 cut(s) 21
Bsp143I GATC 2 cut(s) 148, 450
BspCNI CTCAG 2 cut(s) 232, 313
BspEI TCCGGA 1 cut(s) 21
BspLI GGNNCC 1 cut(s) 383
BspPI GGATC 1 cut(s) 458
BspQI GCTCTTC 1 cut(s) 143
BsrFI RCCGGY 1 cut(s) 12
BsrI ACTGG 4 cut(s) 57, 283, 380, 452
BssAI RCCGGY 1 cut(s) 12
BssMI GATC 2 cut(s) 148, 450
Bst2UI CCWGG 1 cut(s) 338
Bst4CI ACNGT 1 cut(s) 254
Bst6I CTCTTC 1 cut(s) 143
BstDEI CTNAG 3 cut(s) 240, 321, 386
BstF5I GGATG 1 cut(s) 346
BstH2I RGCGCY 1 cut(s) 393
BstHHI GCGC 1 cut(s) 392
BstKTI GATC 2 cut(s) 151, 453
BstMBI GATC 2 cut(s) 148, 450
BstMWI GCNNNNNNNGC 1 cut(s) 281
BstNI CCWGG 1 cut(s) 338
BstSCI CCNGG 1 cut(s) 336
BstSFI CTRYAG 1 cut(s) 253
BstV1I GCAGC 3 cut(s) 232, 259, 425
BsuI GTATCC 1 cut(s) 136
BtsCI GGATG 1 cut(s) 346
BtsI GCAGTG 2 cut(s) 362, 440
BtsIMutI CAGTG 2 cut(s) 362, 440
CfoI GCGC 1 cut(s) 392
Cfr10I RCCGGY 1 cut(s) 12
Cfr13I GGNCC 1 cut(s) 381
CviAII CATG 2 cut(s) 122, 349
CviJI RGCY 5 cut(s) 136, 223, 239, 272, 284
CviKI_1 RGCY 5 cut(s) 136, 223, 239, 272, 284
DdeI CTNAG 3 cut(s) 240, 321, 386
DpnI GATC 2 cut(s) 150, 452
DpnII GATC 2 cut(s) 148, 450
Eam1104I CTCTTC 1 cut(s) 143
EarI CTCTTC 1 cut(s) 143
Eco24I GRGCYC 1 cut(s) 138
Eco47I GGWCC 1 cut(s) 381
EcoRII CCWGG 1 cut(s) 336
EcoT38I GRGCYC 1 cut(s) 138
FaeI CATG 2 cut(s) 125, 352
FaiI YATR 6 cut(s) 33, 123, 156, 308, 333, 350
FatI CATG 2 cut(s) 121, 348
FbaI TGATCA 1 cut(s) 148
Fnu4HI GCNGC 3 cut(s) 221, 273, 439
FokI GGATG 1 cut(s) 353
FriOI GRGCYC 1 cut(s) 138
Fsp4HI GCNGC 3 cut(s) 221, 273, 439
GlaI GCGC 1 cut(s) 391
GluI GCNGC 3 cut(s) 221, 273, 439
HaeII RGCGCY 1 cut(s) 393
HapII CCGG 2 cut(s) 13, 22
HhaI GCGC 1 cut(s) 392
Hin1II CATG 2 cut(s) 125, 352
Hin6I GCGC 1 cut(s) 390
HinP1I GCGC 1 cut(s) 390
HinfI GANTC 1 cut(s) 317
HpaII CCGG 2 cut(s) 13, 22
Hpy166II GTNNAC 2 cut(s) 199, 381
Hpy188I TCNGA 6 cut(s) 40, 72, 148, 165, 295, 322
Hpy188III TCNNGA 2 cut(s) 22, 208
Hpy8I GTNNAC 2 cut(s) 199, 381
HpyAV CCTTC 1 cut(s) 70
HpyCH4III ACNGT 1 cut(s) 254
HpyCH4V TGCA 4 cut(s) 355, 369, 414, 433
HpyF10VI GCNNNNNNNGC 1 cut(s) 281
HpyF3I CTNAG 3 cut(s) 240, 321, 386
Hsp92II CATG 2 cut(s) 125, 352
HspAI GCGC 1 cut(s) 390
Kpn2I TCCGGA 1 cut(s) 21
Ksp22I TGATCA 1 cut(s) 148
Kzo9I GATC 2 cut(s) 148, 450
LguI GCTCTTC 1 cut(s) 143
LmnI GCTCC 1 cut(s) 236
LpnPI CCDG 9 cut(s) 26, 35, 38, 93, 264, 323, 350, 361, 433
Lsp1109I GCAGC 3 cut(s) 232, 259, 425
LweI GCATC 1 cut(s) 315
MaeIII GTNAC 2 cut(s) 8, 443
MalI GATC 2 cut(s) 150, 452
MboI GATC 2 cut(s) 148, 450
MboII GAAGA 1 cut(s) 130
MhlI GDGCHC 1 cut(s) 138
MluCI AATT 2 cut(s) 400, 409
MlyI GAGTC 1 cut(s) 326
MnlI CCTC 8 cut(s) 18, 66, 76, 104, 175, 355, 356, 411
MroI TCCGGA 1 cut(s) 21
MseI TTAA 2 cut(s) 407, 460
MslI CAYNNNNRTG 1 cut(s) 156
MspI CCGG 2 cut(s) 13, 22
MspR9I CCNGG 1 cut(s) 338
MvaI CCWGG 1 cut(s) 338
MwoI GCNNNNNNNGC 1 cut(s) 281
NdeII GATC 2 cut(s) 148, 450
NlaIII CATG 2 cut(s) 125, 352
NlaIV GGNNCC 1 cut(s) 383
NmuCI GTSAC 1 cut(s) 8
PciSI GCTCTTC 1 cut(s) 143
PkrI GCNGC 3 cut(s) 222, 274, 440
PleI GAGTC 1 cut(s) 325
PpsI GAGTC 1 cut(s) 325
Psp6I CCWGG 1 cut(s) 336
PspGI CCWGG 1 cut(s) 336
PspN4I GGNNCC 1 cut(s) 383
PspPI GGNCC 1 cut(s) 381
RseI CAYNNNNRTG 1 cut(s) 156
SapI GCTCTTC 1 cut(s) 143
SaqAI TTAA 2 cut(s) 407, 460
SatI GCNGC 3 cut(s) 221, 273, 439
Sau3AI GATC 2 cut(s) 148, 450
Sau96I GGNCC 1 cut(s) 381
SchI GAGTC 1 cut(s) 326
ScrFI CCNGG 1 cut(s) 338
SduI GDGCHC 1 cut(s) 138
SetI ASST 4 cut(s) 225, 241, 339, 348
SfaNI GCATC 1 cut(s) 315
SfcI CTRYAG 1 cut(s) 253
SinI GGWCC 1 cut(s) 381
SmiMI CAYNNNNRTG 1 cut(s) 156
Sse9I AATT 2 cut(s) 400, 409
SspI AATATT 1 cut(s) 457
StyD4I CCNGG 1 cut(s) 336
TaaI ACNGT 1 cut(s) 254
TaqI TCGA 2 cut(s) 90, 225
TasI AATT 2 cut(s) 400, 409
Tru1I TTAA 2 cut(s) 407, 460
Tru9I TTAA 2 cut(s) 407, 460
TscAI CASTG 2 cut(s) 362, 440
TseFI GTSAC 1 cut(s) 8
TseI GCWGC 3 cut(s) 220, 272, 438
Tsp45I GTSAC 1 cut(s) 8
TspRI CASTG 2 cut(s) 362, 440
VpaK11BI GGWCC 1 cut(s) 381
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.