Rh2BG150500

BAH and coiled-coil domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000878
Physical Location & Seq
Forward (+)
12864196 .. 12869940
5745 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG150500.1

Sequence Viewer

Length: 732 bp
ATGACCCGTGACCGGCACTTCCGGAGGAGATATGTTTCGGAAATCCCAAAACTGGGGAAGTATCAGTTTCGGAGGAAGGCAGAGGCAATCGAAAGAAAAACAAAAACAGGAGGGCAGTTCCATGTATCCAAAGGGCTCTTCTTGTCTGATCACTATGATGTTCAGAGTGCTAATACCATTGAGGGAAAGTGTGTGGTTCACTCGTTCAAGAACTACACGCAGCTCGAAAATGTGGGAGCTGAGTATTACTACTGTAGATTTGAGAACAAGGCTGCTACTGGGGCTTTTACTTCTGATAGAGTTGCTATGTATTGCGAGTCTGAGATGCCGTATAACCTGGATGACCTCATGGTGCAGTGTGAGGAGTGCAAAGACTGCATAAAAAGTTCATGGTTGCCATGCTCAGCTTACTCGGTTCTCTGGCTTCGCCATTGGGGCCACCCAAAACTACTTCCCAACTCACGCCGGAAAACTTCGCATGGCTATGAAGTTCACGGCTTCTATCTCAGTGGCTTTCTATATTGCTACCGCACTTCCGCAGCCTTGGGACCACGTGCCGTACATGATGTACGTCTTCTATTTGATAGGCCACGGTCTCAGTTTGGTAAGAAATATAAGGCTGGCTTATTACCAGCACGTTGCCAATGGACTTATGCGTGGCTTATGCGCGCGGCAACAGCGGTTGATAAGAACGCGCCCACAGTTGCCGGTGACAGTCAGTGGCGGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005694 GO:0006323 GO:0006325 GO:0006333 GO:0006338 GO:0006342 GO:0006355 GO:0006996 GO:0007275 GO:0008150 GO:0009791 GO:0009845 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010639 GO:0016043 GO:0016458 GO:0017053 GO:0019219 GO:0019222 GO:0022607 GO:0031056 GO:0031057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031399 GO:0031400 GO:0031497 GO:0031507 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0035064 GO:0035065 GO:0035067 GO:0040029 GO:0042393 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044085 GO:0044212 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070828 GO:0071103 GO:0071840 GO:0080090 GO:0090351 GO:0090568 GO:0097159 GO:0140030 GO:0140034 GO:1901363 GO:1901983 GO:1901984 GO:1902275 GO:1902679 GO:1903506 GO:1903507 GO:1905268 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2000756 GO:2000757 GO:2001141 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAH PHD

Protein Analysis

243

Amino Acids

28.19

Weight (kDa)

9.45

Isoelectric Point (pI)

42.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 669, 671, 695
AccIII TCCGGA 1 cut(s) 21
AciI CCGC 5 cut(s) 529, 537, 671, 680, 724
AcvI CACGTG 1 cut(s) 554
AfaI GTAC 2 cut(s) 561, 570
AfiI CCNNNNNNNGG 3 cut(s) 12, 52, 53
AgsI TTSAA 1 cut(s) 208
AjnI CCWGG 1 cut(s) 336
AjuI GAANNNNNNNTTGG 2 cut(s) 122, 154
AluBI AGCT 3 cut(s) 223, 239, 407
AluI AGCT 3 cut(s) 223, 239, 407
Alw26I GTCTC 1 cut(s) 600
Aor13HI TCCGGA 1 cut(s) 21
AoxI GGCC 2 cut(s) 436, 587
ApeKI GCWGC 3 cut(s) 220, 272, 539
AspLEI GCGC 3 cut(s) 669, 671, 697
AspS9I GGNCC 2 cut(s) 436, 548
AsuHPI GGTGA 1 cut(s) 722
AvaII GGWCC 1 cut(s) 548
BanII GRGCYC 1 cut(s) 138
BbrPI CACGTG 1 cut(s) 554
BbsI GAAGAC 1 cut(s) 566
BbvI GCAGC 3 cut(s) 232, 259, 551
BceAI ACGGC 3 cut(s) 313, 511, 542
BciT130I CCWGG 1 cut(s) 338
BciVI GTATCC 1 cut(s) 136
BclI TGATCA 1 cut(s) 148
BcoDI GTCTC 1 cut(s) 600
BfmI CTRYAG 1 cut(s) 253
BfuI GTATCC 1 cut(s) 136
BglI GCCNNNNNGGC 1 cut(s) 435
BisI GCNGC 4 cut(s) 221, 273, 540, 672
BlpI GCTNAGC 1 cut(s) 403
BlsI GCNGC 4 cut(s) 222, 274, 541, 673
Bme1390I CCNGG 1 cut(s) 338
Bme18I GGWCC 1 cut(s) 548
BmgT120I GGNCC 2 cut(s) 436, 548
BmiI GGNNCC 2 cut(s) 437, 549
BmrFI CCNGG 1 cut(s) 338
BmrI ACTGGG 2 cut(s) 62, 288
BmsI GCATC 1 cut(s) 315
BmuI ACTGGG 2 cut(s) 62, 288
BpiI GAAGAC 1 cut(s) 566
Bpu1102I GCTNAGC 1 cut(s) 403
BsaAI YACGTR 1 cut(s) 554
BsaI GGTCTC 1 cut(s) 600
BsaJI CCNNGG 2 cut(s) 543, 590
BsaWI WCCGGW 1 cut(s) 21
Bsc4I CCNNNNNNNGG 3 cut(s) 12, 52, 53
Bse118I RCCGGY 2 cut(s) 12, 707
Bse1I ACTGG 2 cut(s) 57, 283
BseAI TCCGGA 1 cut(s) 21
BseBI CCWGG 1 cut(s) 338
BseDI CCNNGG 2 cut(s) 543, 590
BseGI GGATG 1 cut(s) 346
BseLI CCNNNNNNNGG 3 cut(s) 12, 52, 53
BseMII CTCAG 5 cut(s) 231, 312, 417, 520, 611
BseNI ACTGG 2 cut(s) 57, 283
BsePI GCGCGC 1 cut(s) 667
BseRI GAGGAG 2 cut(s) 40, 377
BseXI GCAGC 3 cut(s) 232, 259, 551
BsgI GTGCAG 1 cut(s) 374
Bsh1236I CGCG 3 cut(s) 669, 671, 695
BshFI GGCC 2 cut(s) 438, 589
BsiSI CCGG 4 cut(s) 13, 22, 466, 708
BslFI GGGAC 1 cut(s) 561
BslI CCNNNNNNNGG 3 cut(s) 12, 52, 53
BsmAI GTCTC 1 cut(s) 600
BsmFI GGGAC 1 cut(s) 561
BsnI GGCC 2 cut(s) 438, 589
Bso31I GGTCTC 1 cut(s) 600
Bsp1286I GDGCHC 1 cut(s) 138
Bsp13I TCCGGA 1 cut(s) 21
Bsp143I GATC 1 cut(s) 148
Bsp1720I GCTNAGC 1 cut(s) 403
BspACI CCGC 5 cut(s) 529, 537, 671, 680, 724
BspANI GGCC 2 cut(s) 438, 589
BspCNI CTCAG 5 cut(s) 232, 313, 416, 519, 610
BspEI TCCGGA 1 cut(s) 21
BspFNI CGCG 3 cut(s) 669, 671, 695
BspLI GGNNCC 2 cut(s) 437, 549
BspQI GCTCTTC 1 cut(s) 143
BspTNI GGTCTC 1 cut(s) 600
BsrFI RCCGGY 2 cut(s) 12, 707
BsrI ACTGG 2 cut(s) 57, 283
BssAI RCCGGY 2 cut(s) 12, 707
BssECI CCNNGG 2 cut(s) 543, 590
BssHII GCGCGC 1 cut(s) 667
BssMI GATC 1 cut(s) 148
BssT1I CCWWGG 1 cut(s) 543
Bst2UI CCWGG 1 cut(s) 338
Bst4CI ACNGT 4 cut(s) 254, 594, 703, 716
Bst6I CTCTTC 1 cut(s) 143
BstAPI GCANNNNNTGC 1 cut(s) 375
BstBAI YACGTR 1 cut(s) 554
BstC8I GCNNGC 3 cut(s) 622, 669, 726
BstDEI CTNAG 5 cut(s) 240, 321, 403, 506, 597
BstDSI CCRYGG 1 cut(s) 590
BstF5I GGATG 1 cut(s) 346
BstFNI CGCG 3 cut(s) 669, 671, 695
BstHHI GCGC 3 cut(s) 669, 671, 697
BstKTI GATC 1 cut(s) 151
BstMAI GTCTC 1 cut(s) 600
BstMBI GATC 1 cut(s) 148
BstMWI GCNNNNNNNGC 4 cut(s) 281, 375, 435, 677
BstNI CCWGG 1 cut(s) 338
BstSCI CCNGG 1 cut(s) 336
BstSFI CTRYAG 1 cut(s) 253
BstUI CGCG 3 cut(s) 669, 671, 695
BstV1I GCAGC 3 cut(s) 232, 259, 551
BstV2I GAAGAC 1 cut(s) 566
BsuI GTATCC 1 cut(s) 136
BsuRI GGCC 2 cut(s) 438, 589
BtgI CCRYGG 1 cut(s) 590
BtsCI GGATG 1 cut(s) 346
BtsI GCAGTG 1 cut(s) 362
BtsIMutI CAGTG 3 cut(s) 362, 514, 725
Cac8I GCNNGC 3 cut(s) 622, 669, 726
CfoI GCGC 3 cut(s) 669, 671, 697
Cfr10I RCCGGY 2 cut(s) 12, 707
Cfr13I GGNCC 2 cut(s) 436, 548
Csp6I GTAC 2 cut(s) 560, 569
CviAII CATG 6 cut(s) 122, 349, 390, 399, 479, 563
CviQI GTAC 2 cut(s) 560, 569
DdeI CTNAG 5 cut(s) 240, 321, 403, 506, 597
DpnI GATC 1 cut(s) 150
DpnII GATC 1 cut(s) 148
Eam1104I CTCTTC 1 cut(s) 143
EarI CTCTTC 1 cut(s) 143
Eco130I CCWWGG 1 cut(s) 543
Eco24I GRGCYC 1 cut(s) 138
Eco31I GGTCTC 1 cut(s) 600
Eco47I GGWCC 1 cut(s) 548
Eco72I CACGTG 1 cut(s) 554
EcoRII CCWGG 1 cut(s) 336
EcoT14I CCWWGG 1 cut(s) 543
EcoT38I GRGCYC 1 cut(s) 138
ErhI CCWWGG 1 cut(s) 543
FaeI CATG 6 cut(s) 125, 352, 393, 402, 482, 566
FalI AAGNNNNNCTT 2 cut(s) 608, 640
FaqI GGGAC 1 cut(s) 561
FatI CATG 6 cut(s) 121, 348, 389, 398, 478, 562
FauI CCCGC 1 cut(s) 717
FbaI TGATCA 1 cut(s) 148
Fnu4HI GCNGC 4 cut(s) 221, 273, 540, 672
FokI GGATG 1 cut(s) 353
FriOI GRGCYC 1 cut(s) 138
Fsp4HI GCNGC 4 cut(s) 221, 273, 540, 672
GlaI GCGC 3 cut(s) 668, 670, 696
GluI GCNGC 4 cut(s) 221, 273, 540, 672
HaeIII GGCC 2 cut(s) 438, 589
HapII CCGG 4 cut(s) 13, 22, 466, 708
HhaI GCGC 3 cut(s) 669, 671, 697
Hin1II CATG 6 cut(s) 125, 352, 393, 402, 482, 566
Hin6I GCGC 3 cut(s) 667, 669, 695
HinP1I GCGC 3 cut(s) 667, 669, 695
HinfI GANTC 1 cut(s) 317
HpaII CCGG 4 cut(s) 13, 22, 466, 708
HphI GGTGA 1 cut(s) 722
Hpy166II GTNNAC 2 cut(s) 199, 493
Hpy188I TCNGA 6 cut(s) 40, 72, 148, 165, 295, 322
Hpy188III TCNNGA 2 cut(s) 22, 208
Hpy8I GTNNAC 2 cut(s) 199, 493
HpyAV CCTTC 1 cut(s) 70
HpyCH4III ACNGT 4 cut(s) 254, 594, 703, 716
HpyCH4IV ACGT 3 cut(s) 553, 571, 637
HpyCH4V TGCA 3 cut(s) 355, 369, 378
HpyF10VI GCNNNNNNNGC 4 cut(s) 281, 375, 435, 677
HpyF3I CTNAG 5 cut(s) 240, 321, 403, 506, 597
HpySE526I ACGT 3 cut(s) 553, 571, 637
Hsp92II CATG 6 cut(s) 125, 352, 393, 402, 482, 566
HspAI GCGC 3 cut(s) 667, 669, 695
Kpn2I TCCGGA 1 cut(s) 21
Ksp22I TGATCA 1 cut(s) 148
Kzo9I GATC 1 cut(s) 148
LguI GCTCTTC 1 cut(s) 143
LmnI GCTCC 1 cut(s) 236
Lsp1109I GCAGC 3 cut(s) 232, 259, 551
LweI GCATC 1 cut(s) 315
MaeII ACGT 3 cut(s) 553, 571, 637
MaeIII GTNAC 2 cut(s) 8, 710
MalI GATC 1 cut(s) 150
MboI GATC 1 cut(s) 148
MboII GAAGA 2 cut(s) 130, 566
MhlI GDGCHC 1 cut(s) 138
MlyI GAGTC 1 cut(s) 326
MnlI CCTC 7 cut(s) 18, 66, 76, 104, 175, 355, 356
MroI TCCGGA 1 cut(s) 21
MseI TTAA 1 cut(s) 730
MslI CAYNNNNRTG 2 cut(s) 156, 483
MspA1I CMGCKG 1 cut(s) 680
MspI CCGG 4 cut(s) 13, 22, 466, 708
MspR9I CCNGG 1 cut(s) 338
MvaI CCWGG 1 cut(s) 338
MvnI CGCG 3 cut(s) 669, 671, 695
MwoI GCNNNNNNNGC 4 cut(s) 281, 375, 435, 677
NdeII GATC 1 cut(s) 148
NlaIII CATG 6 cut(s) 125, 352, 393, 402, 482, 566
NlaIV GGNNCC 2 cut(s) 437, 549
NmuCI GTSAC 2 cut(s) 8, 710
PauI GCGCGC 1 cut(s) 667
PciSI GCTCTTC 1 cut(s) 143
PkrI GCNGC 4 cut(s) 222, 274, 541, 673
PleI GAGTC 1 cut(s) 325
PmaCI CACGTG 1 cut(s) 554
PmlI CACGTG 1 cut(s) 554
PpsI GAGTC 1 cut(s) 325
Ppu21I YACGTR 1 cut(s) 554
Psp6I CCWGG 1 cut(s) 336
PspCI CACGTG 1 cut(s) 554
PspGI CCWGG 1 cut(s) 336
PspN4I GGNNCC 2 cut(s) 437, 549
PspPI GGNCC 2 cut(s) 436, 548
PteI GCGCGC 1 cut(s) 667
RsaI GTAC 2 cut(s) 561, 570
RsaNI GTAC 2 cut(s) 560, 569
RseI CAYNNNNRTG 2 cut(s) 156, 483
SapI GCTCTTC 1 cut(s) 143
SaqAI TTAA 1 cut(s) 730
SatI GCNGC 4 cut(s) 221, 273, 540, 672
Sau3AI GATC 1 cut(s) 148
Sau96I GGNCC 2 cut(s) 436, 548
SchI GAGTC 1 cut(s) 326
ScrFI CCNGG 1 cut(s) 338
SduI GDGCHC 1 cut(s) 138
SetI ASST 8 cut(s) 225, 241, 339, 348, 409, 556, 574, 640
SfaNI GCATC 1 cut(s) 315
SfcI CTRYAG 1 cut(s) 253
SinI GGWCC 1 cut(s) 548
SmiMI CAYNNNNRTG 2 cut(s) 156, 483
SsiI CCGC 5 cut(s) 529, 537, 671, 680, 724
StyD4I CCNGG 1 cut(s) 336
StyI CCWWGG 1 cut(s) 543
TaaI ACNGT 4 cut(s) 254, 594, 703, 716
TaiI ACGT 3 cut(s) 556, 574, 640
TaqI TCGA 2 cut(s) 90, 225
TauI GCSGC 1 cut(s) 674
Tru1I TTAA 1 cut(s) 730
Tru9I TTAA 1 cut(s) 730
TscAI CASTG 3 cut(s) 362, 514, 725
TseFI GTSAC 2 cut(s) 8, 710
TseI GCWGC 3 cut(s) 220, 272, 539
Tsp45I GTSAC 2 cut(s) 8, 710
TspDTI ATGAA 2 cut(s) 378, 501
TspRI CASTG 3 cut(s) 362, 514, 725
VpaK11BI GGWCC 1 cut(s) 548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.