Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0001411

Physical Location & Seq

Genomic Coordinates Forward (+)

4400445 .. 4413576

Gene Structure 13132 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG065800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGTTGTCCATCCCTAACATCAGTGGCACAGTTATAGGGAATACTAGTAAAAAGATAAGAGGGACTGTGGTATTGAGGAAGAAGAATGCTTTGGACTTTAATGATTTGATTGCTTCAGTTGCTGATGGCGCGCTTGAGTTAGGAAATCGGAGTTCCAAGAGCGTTCTTGATCATCACACTGAATTTTATCTTGAGACTATCACACTCGAAGATGTTCTAGGTGAGGGCAGGATCCACTTTGTTTGCAACTCTTGGGTGTACCCTGCAGCCAAATACACAAAAGATCGCATTTTCTTTGTTAACAAGTCATATCTTCCAAGTGATACACCATTGCCACTACAAAGTTTCAGAGAAGACGAACTGGTAAACTTAAGAAGAGATGGGGAAGGAGAGCTCAAGGAATGGGACAGGGTTTATGACTATGCTTACTACAATGATCTCGGGGATCCAGATGAGGGCGAAGAATATGTTTGTCCTATTCTTGGAGGATCTAGAGTATACATACCCTTACCCTCGAAGAGGAAGAACTGGACGAGCACCGACAAAGACAGATTCAAACAGAGCGAGAATAGGTTGAACCTTCTTCTGAGCCTAAACATTTATGTTCTGAGAGATGAACGATTTGGCCACATGAAGTTGGCAGACTTTCTTACTTATGGTTTTAAATCCATAGCTCAGTTCGTTAGAAAAGAGCTTGAGGCTTTGTTTGATGATACTCCCAATGAGTTTGACAGCTTCGAAGATGATATTGGGGACAACATCCCAGTGGAGATGCTCAAGGAAATTCTACGAACCGATGGTGAAAATTTCCTCAGGTTCCGAGTGCCTCAAGTGATCAAAGAGGATAAGACTGCTTGGAGGACTGATGAAGAATTTGCCAGAGAAATGTTGGCTGGAGTTAACCCTGTCACCATTCAGTGTCTCCAACACCATCATGAGTGTCATTCACTTCATATAGTTCCTGGCACATCACACAAGCATCATGAAGAAATTTCGCTCGGAAACTTGAAGAGATTTCATTTCATAGAACTTCAGATTGCAACAAATAACTTCAGCAGCAAGTACCTACTAAGAAAGGGAGGCTTTGGACATGTTTACAAAGGAACTATCTGTGATGGCACTATCGTAGCAGTCAAGAGACTTAAAGATGGCAGTGCTCTTGGTGGAGAGATTCAATTCCAGACTGAAGTTGAAATGATCAGCCTAGCAGTTCATCGCAACCTTCTCCAGCTTTATGGGTTTTGCATCACTCCAACAGAAAGACTTCTAGTTTACCCATACATGTCCAATGGCAGTGTGGCTTCTCGTGTCAAAGGGAAACCAATGTTGGATTGGGGAACTAGGAAACGAATTGCCTTGGGAGCTGCAAAAGGATTGTTATACCTTCATGAGCAGTGTGACCCGAAAATTATCCACAAGGATGTGAAGGTAGCAAATGTACTTCTTGATGACTACTGTGAAGCCGTGGACAGAGATTTTGATTTGGCAAAGATTTTGGATCACCAAGTGTTTTGTGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0016165 GO:0016491 GO:0016701 GO:0016702 GO:0044424 GO:0044464 GO:0051213 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

506

Amino Acids

57.8

Weight (kDa)

6.01

Isoelectric Point (pI)

35.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLAT	PF01477	55 - 99	1.1e-08	PLAT/LH2 domain
Lipoxygenase	PF00305	113 - 312	1.2e-47	Lipoxygenase
Pkinase	PF00069	357 - 502	8.6e-21	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	357 - 499	1.7e-19	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001411)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr1g0372821 RchiOBHm_Chr2g0120391 RchiOBHm_Chr3g0472751 RchiOBHm_Chr5g0036011 RchiOBHm_Chr6g0269661 RchiOBHm_Chr7g0231021
rosa_laevigata	RLG00000000534 RLG00000003816
rosa_multiflora	Rmu_sc0000084.1_g000050 Rmu_sc0001493.1_g000009 Rmu_sc0001851.1_g000026 Rmu_sc0003198.1_g000001 Rmu_sc0003198.1_g000002 Rmu_sc0004226.1_g000003 Rmu_sc0005738.1_g000004 Rmu_sc0006380.1_g000004 Rmu_sc0012041.1_g000003 Rmu_sc0017397.1_g000001
rosa_roxburghii	Rroxscaffold_4G00313360
rosa_rugosa	Rorug03G0325800 Rorug04G0073800 Rorug06G0052600
rosa_samantha	Rh1CG021400 Rh2CG235800 Rh2DG107900 Rh3AG180200 Rh3BG065800 Rh3BG206400 Rh3CG064500 Rh3CG203500 Rh3CG221800 Rh3CG270900 Rh3DG065700 Rh3DG132500 Rh3DG266800 Rh4AG242700 Rh4BG140300 Rh4BG140400 Rh4CG033900 Rh5AG093800 Rh5BG377400 Rh5BG426700 Rh5DG440600 Rh6AG048200 Rh6AG074100 Rh6AG148600 Rh6AG196800 Rh6AG406100 Rh7AG362100 Rh7BG138700 Rh7CG380700 Rh7DG335500
rosa_wichuraiana	Rw3G013510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	498
AccII	CGCG	1 cut(s)	131
AclWI	GGATC	6 cut(s)	226, 239, 440, 453, 496, 1506
AcoI	YGGCCR	1 cut(s)	625
AcsI	RAATTY	5 cut(s)	182, 783, 805, 872, 990
AcuI	CTGAAG	4 cut(s)	99, 1016, 1036, 1206
AdeI	CACNNNGTG	1 cut(s)	1507
AfaI	GTAC	3 cut(s)	260, 1064, 1440
AfiI	CCNNNNNNNGG	3 cut(s)	455, 482, 519
AflII	CTTAAG	1 cut(s)	370
AflIII	ACRYGT	2 cut(s)	1090, 1281
AgsI	TTSAA	5 cut(s)	556, 577, 1009, 1175, 1193
AhlI	ACTAGT	1 cut(s)	44
AjnI	CCWGG	1 cut(s)	961
AjuI	GAANNNNNNNTTGG	6 cut(s)	74, 106, 732, 764, 1310, 1342
AluBI	AGCT	6 cut(s)	394, 674, 694, 735, 1231, 1364
AluI	AGCT	6 cut(s)	394, 674, 694, 735, 1231, 1364
Alw21I	GWGCWC	3 cut(s)	396, 539, 1159
Alw26I	GTCTC	3 cut(s)	188, 926, 1132
AlwI	GGATC	6 cut(s)	226, 239, 440, 453, 496, 1506
AlwNI	CAGNNNCTG	1 cut(s)	122
Ama87I	CYCGRG	1 cut(s)	440
AoxI	GGCC	1 cut(s)	625
ApeKI	GCWGC	3 cut(s)	266, 1056, 1364
ApoI	RAATTY	5 cut(s)	182, 783, 805, 872, 990
ArsI	GACNNNNNNTTYG	2 cut(s)	1460, 1492
Asp700I	GAANNNNTTC	2 cut(s)	213, 1263
AspLEI	GCGC	2 cut(s)	131, 133
AsuHPI	GGTGA	4 cut(s)	233, 812, 901, 1493
AsuII	TTCGAA	1 cut(s)	738
AvaI	CYCGRG	1 cut(s)	440
AxyI	CCTNAGG	1 cut(s)	812
BalI	TGGCCA	1 cut(s)	627
BamHI	GGATCC	2 cut(s)	231, 445
BanII	GRGCYC	1 cut(s)	396
BauI	CACGAG	1 cut(s)	1305
BbsI	GAAGAC	1 cut(s)	360
Bbv12I	GWGCWC	3 cut(s)	396, 539, 1159
BbvI	GCAGC	3 cut(s)	278, 1068, 1351
BccI	CCATC	7 cut(s)	17, 119, 374, 791, 939, 1109, 1142
BceAI	ACGGC	1 cut(s)	1448
BciT130I	CCWGG	1 cut(s)	963
BclI	TGATCA	3 cut(s)	169, 834, 1197
BcoDI	GTCTC	3 cut(s)	188, 926, 1132
BcuI	ACTAGT	1 cut(s)	44
BfaI	CTAG	6 cut(s)	45, 218, 492, 1205, 1268, 1341
BfmI	CTRYAG	1 cut(s)	264
BfrI	CTTAAG	1 cut(s)	370
BisI	GCNGC	3 cut(s)	267, 1057, 1365
BlsI	GCNGC	3 cut(s)	268, 1058, 1366
Bme1390I	CCNGG	1 cut(s)	963
BmeT110I	CYCGRG	1 cut(s)	440
BmiI	GGNNCC	3 cut(s)	233, 447, 818
BmrFI	CCNGG	1 cut(s)	963
BmrI	ACTGGG	1 cut(s)	758
BmsI	GCATC	3 cut(s)	762, 988, 1254
BmuI	ACTGGG	1 cut(s)	758
BpiI	GAAGAC	1 cut(s)	360
BpmI	CTGGAG	2 cut(s)	915, 1211
Bpu14I	TTCGAA	1 cut(s)	738
BpuEI	CTTGAG	6 cut(s)	155, 212, 380, 716, 761, 813
BsaJI	CCNNGG	2 cut(s)	1356, 1464
Bsc4I	CCNNNNNNNGG	3 cut(s)	455, 482, 519
Bse1I	ACTGG	3 cut(s)	366, 533, 764
Bse21I	CCTNAGG	1 cut(s)	812
Bse3DI	GCAATG	1 cut(s)	329
BseBI	CCWGG	1 cut(s)	963
BseDI	CCNNGG	2 cut(s)	1356, 1464
BseGI	GGATG	3 cut(s)	9, 759, 1426
BseLI	CCNNNNNNNGG	3 cut(s)	455, 482, 519
BseMI	GCAATG	1 cut(s)	329
BseMII	CTCAG	4 cut(s)	578, 599, 689, 826
BseNI	ACTGG	3 cut(s)	366, 533, 764
BsePI	GCGCGC	1 cut(s)	129
BseXI	GCAGC	3 cut(s)	278, 1068, 1351
Bsh1236I	CGCG	1 cut(s)	131
BshFI	GGCC	1 cut(s)	627
BsiHKAI	GWGCWC	3 cut(s)	396, 539, 1159
BsiHKCI	CYCGRG	1 cut(s)	440
BslFI	GGGAC	3 cut(s)	76, 419, 767
BslI	CCNNNNNNNGG	3 cut(s)	455, 482, 519
BsmAI	GTCTC	3 cut(s)	188, 926, 1132
BsmFI	GGGAC	3 cut(s)	76, 419, 767
BsmI	GAATGC	1 cut(s)	91
BsnI	GGCC	1 cut(s)	627
BsoBI	CYCGRG	1 cut(s)	440
Bsp119I	TTCGAA	1 cut(s)	738
Bsp1286I	GDGCHC	3 cut(s)	396, 539, 1159
Bsp143I	GATC	9 cut(s)	169, 231, 283, 436, 445, 488, 834, 1197, 1498
BspANI	GGCC	1 cut(s)	627
BspCNI	CTCAG	4 cut(s)	579, 600, 688, 825
BspFNI	CGCG	1 cut(s)	131
BspHI	TCATGA	3 cut(s)	934, 982, 1387
BspLI	GGNNCC	3 cut(s)	233, 447, 818
BspMAI	CTGCAG	1 cut(s)	268
BspPI	GGATC	6 cut(s)	226, 239, 440, 453, 496, 1506
BspT104I	TTCGAA	1 cut(s)	738
BspTI	CTTAAG	1 cut(s)	370
BsrDI	GCAATG	1 cut(s)	329
BsrI	ACTGG	3 cut(s)	366, 533, 764
BssECI	CCNNGG	2 cut(s)	1356, 1464
BssHII	GCGCGC	1 cut(s)	129
BssMI	GATC	9 cut(s)	169, 231, 283, 436, 445, 488, 834, 1197, 1498
BssNAI	GTATAC	1 cut(s)	499
BssSI	CACGAG	1 cut(s)	1305
BssT1I	CCWWGG	1 cut(s)	1356
Bst1107I	GTATAC	1 cut(s)	499
Bst2BI	CACGAG	1 cut(s)	1305
Bst2UI	CCWGG	1 cut(s)	963
Bst4CI	ACNGT	3 cut(s)	31, 67, 1457
Bst6I	CTCTTC	3 cut(s)	370, 512, 1004
BstAFI	CTTAAG	1 cut(s)	370
BstBI	TTCGAA	1 cut(s)	738
BstC8I	GCNNGC	1 cut(s)	131
BstDEI	CTNAG	5 cut(s)	587, 608, 675, 812, 1070
BstDSI	CCRYGG	1 cut(s)	1464
BstENI	CCTNNNNNAGG	1 cut(s)	517
BstF5I	GGATG	3 cut(s)	9, 759, 1426
BstFNI	CGCG	1 cut(s)	131
BstHHI	GCGC	2 cut(s)	131, 133
BstKTI	GATC	9 cut(s)	172, 234, 286, 439, 448, 491, 837, 1200, 1501
BstMAI	GTCTC	3 cut(s)	188, 926, 1132
BstMBI	GATC	9 cut(s)	169, 231, 283, 436, 445, 488, 834, 1197, 1498
BstMWI	GCNNNNNNNGC	3 cut(s)	119, 128, 1361
BstNI	CCWGG	1 cut(s)	963
BstNSI	RCATGY	2 cut(s)	1094, 1285
BstSCI	CCNGG	1 cut(s)	961
BstSFI	CTRYAG	1 cut(s)	264
BstUI	CGCG	1 cut(s)	131
BstV1I	GCAGC	3 cut(s)	278, 1068, 1351
BstV2I	GAAGAC	1 cut(s)	360
BstX2I	RGATCY	3 cut(s)	231, 445, 488
BstXI	CCANNNNNNTGG	1 cut(s)	1235
BstYI	RGATCY	3 cut(s)	231, 445, 488
BstZ17I	GTATAC	1 cut(s)	499
Bsu36I	CCTNAGG	1 cut(s)	812
BsuRI	GGCC	1 cut(s)	627
BtgI	CCRYGG	1 cut(s)	1464
BtgZI	GCGATG	1 cut(s)	1199
BtsCI	GGATG	3 cut(s)	9, 759, 1426
BtsI	GCAGTG	3 cut(s)	1159, 1300, 1400
BtsIMutI	CAGTG	7 cut(s)	28, 177, 771, 923, 1159, 1300, 1400
Cac8I	GCNNGC	1 cut(s)	131
CaiI	CAGNNNCTG	1 cut(s)	122
CciI	TCATGA	3 cut(s)	934, 982, 1387
CfoI	GCGC	2 cut(s)	131, 133
Csp6I	GTAC	3 cut(s)	259, 1063, 1439
CspCI	CAANNNNNGTGG	2 cut(s)	224, 259
CviAII	CATG	6 cut(s)	631, 935, 983, 1091, 1282, 1388
CviQI	GTAC	3 cut(s)	259, 1063, 1439
DdeI	CTNAG	5 cut(s)	587, 608, 675, 812, 1070
DpnI	GATC	9 cut(s)	171, 233, 285, 438, 447, 490, 836, 1199, 1500
DpnII	GATC	9 cut(s)	169, 231, 283, 436, 445, 488, 834, 1197, 1498
DraI	TTTAAA	1 cut(s)	664
DraIII	CACNNNGTG	1 cut(s)	1507
EaeI	YGGCCR	1 cut(s)	625
Eam1104I	CTCTTC	3 cut(s)	370, 512, 1004
EarI	CTCTTC	3 cut(s)	370, 512, 1004
Ecl136II	GAGCTC	1 cut(s)	394
Eco130I	CCWWGG	1 cut(s)	1356
Eco24I	GRGCYC	1 cut(s)	396
Eco53kI	GAGCTC	1 cut(s)	394
Eco57I	CTGAAG	4 cut(s)	99, 1016, 1036, 1206
Eco81I	CCTNAGG	1 cut(s)	812
Eco88I	CYCGRG	1 cut(s)	440
EcoICRI	GAGCTC	1 cut(s)	394
EcoNI	CCTNNNNNAGG	1 cut(s)	517
EcoRII	CCWGG	1 cut(s)	961
EcoT14I	CCWWGG	1 cut(s)	1356
EcoT38I	GRGCYC	1 cut(s)	396
ErhI	CCWWGG	1 cut(s)	1356
FaeI	CATG	6 cut(s)	634, 938, 986, 1094, 1285, 1391
FalI	AAGNNNNNCTT	2 cut(s)	1067, 1099
FaqI	GGGAC	3 cut(s)	76, 419, 767
FatI	CATG	6 cut(s)	630, 934, 982, 1090, 1281, 1387
FbaI	TGATCA	3 cut(s)	169, 834, 1197
FblI	GTMKAC	1 cut(s)	498
Fnu4HI	GCNGC	3 cut(s)	267, 1057, 1365
FokI	GGATG	2 cut(s)	746, 1433
FriOI	GRGCYC	1 cut(s)	396
Fsp4HI	GCNGC	3 cut(s)	267, 1057, 1365
FspBI	CTAG	6 cut(s)	45, 218, 492, 1205, 1268, 1341
GlaI	GCGC	2 cut(s)	130, 132
GluI	GCNGC	3 cut(s)	267, 1057, 1365
GsuI	CTGGAG	2 cut(s)	915, 1211
HaeIII	GGCC	1 cut(s)	627
HhaI	GCGC	2 cut(s)	131, 133
Hin1II	CATG	6 cut(s)	634, 938, 986, 1094, 1285, 1391
Hin6I	GCGC	2 cut(s)	129, 131
HinP1I	GCGC	2 cut(s)	129, 131
HincII	GTYRAC	2 cut(s)	301, 901
HindII	GTYRAC	2 cut(s)	301, 901
HinfI	GANTC	2 cut(s)	552, 1171
HpaI	GTTAAC	2 cut(s)	301, 901
HphI	GGTGA	4 cut(s)	233, 812, 901, 1493
Hpy166II	GTNNAC	8 cut(s)	259, 301, 367, 499, 901, 1096, 1273, 1468
Hpy188I	TCNGA	7 cut(s)	150, 350, 588, 609, 821, 1001, 1035
Hpy8I	GTNNAC	8 cut(s)	259, 301, 367, 499, 901, 1096, 1273, 1468
HpyAV	CCTTC	5 cut(s)	380, 590, 1232, 1394, 1420
HpyCH4III	ACNGT	3 cut(s)	31, 67, 1457
HpyCH4V	TGCA	5 cut(s)	246, 266, 1040, 1245, 1367
HpyF10VI	GCNNNNNNNGC	3 cut(s)	119, 128, 1361
HpyF3I	CTNAG	5 cut(s)	587, 608, 675, 812, 1070
Hsp92II	CATG	6 cut(s)	634, 938, 986, 1094, 1285, 1391
HspAI	GCGC	2 cut(s)	129, 131
Ksp22I	TGATCA	3 cut(s)	169, 834, 1197
KspAI	GTTAAC	2 cut(s)	301, 901
Kzo9I	GATC	9 cut(s)	169, 231, 283, 436, 445, 488, 834, 1197, 1498
LmnI	GCTCC	1 cut(s)	1361
Lsp1109I	GCAGC	3 cut(s)	278, 1068, 1351
LweI	GCATC	3 cut(s)	762, 988, 1254
MaeI	CTAG	6 cut(s)	45, 218, 492, 1205, 1268, 1341
MaeIII	GTNAC	2 cut(s)	907, 1397
MalI	GATC	9 cut(s)	171, 233, 285, 438, 447, 490, 836, 1199, 1500
MboI	GATC	9 cut(s)	169, 231, 283, 436, 445, 488, 834, 1197, 1498
MflI	RGATCY	3 cut(s)	231, 445, 488
MhlI	GDGCHC	3 cut(s)	396, 539, 1159
MlsI	TGGCCA	1 cut(s)	627
MluCI	AATT	8 cut(s)	182, 783, 805, 872, 990, 1175, 1350, 1407
MluNI	TGGCCA	1 cut(s)	627
MmeI	TCCRAC	3 cut(s)	949, 1277, 1308
Mox20I	TGGCCA	1 cut(s)	627
MroXI	GAANNNNTTC	2 cut(s)	213, 1263
MscI	TGGCCA	1 cut(s)	627
MseI	TTAA	7 cut(s)	99, 300, 371, 663, 900, 1143, 1519
MslI	CAYNNNNRTG	3 cut(s)	764, 933, 1419
Msp20I	TGGCCA	1 cut(s)	627
MspCI	CTTAAG	1 cut(s)	370
MspR9I	CCNGG	1 cut(s)	963
Mva1269I	GAATGC	1 cut(s)	91
MvaI	CCWGG	1 cut(s)	963
MvnI	CGCG	1 cut(s)	131
MwoI	GCNNNNNNNGC	3 cut(s)	119, 128, 1361
NdeII	GATC	9 cut(s)	169, 231, 283, 436, 445, 488, 834, 1197, 1498
NlaIII	CATG	6 cut(s)	634, 938, 986, 1094, 1285, 1391
NlaIV	GGNNCC	3 cut(s)	233, 447, 818
NmuCI	GTSAC	2 cut(s)	907, 1397
NspI	RCATGY	2 cut(s)	1094, 1285
NspV	TTCGAA	1 cut(s)	738
PagI	TCATGA	3 cut(s)	934, 982, 1387
PauI	GCGCGC	1 cut(s)	129
PciI	ACATGT	2 cut(s)	1090, 1281
PctI	GAATGC	1 cut(s)	91
PdmI	GAANNNNTTC	2 cut(s)	213, 1263
PfeI	GAWTC	2 cut(s)	552, 1171
PkrI	GCNGC	3 cut(s)	268, 1058, 1366
PscI	ACATGT	2 cut(s)	1090, 1281
Psp124BI	GAGCTC	1 cut(s)	396
Psp6I	CCWGG	1 cut(s)	961
PspGI	CCWGG	1 cut(s)	961
PspN4I	GGNNCC	3 cut(s)	233, 447, 818
PstI	CTGCAG	1 cut(s)	268
PstNI	CAGNNNCTG	1 cut(s)	122
PsuI	RGATCY	3 cut(s)	231, 445, 488
PteI	GCGCGC	1 cut(s)	129
RsaI	GTAC	3 cut(s)	260, 1064, 1440
RsaNI	GTAC	3 cut(s)	259, 1063, 1439
RseI	CAYNNNNRTG	3 cut(s)	764, 933, 1419
SacI	GAGCTC	1 cut(s)	396
SaqAI	TTAA	7 cut(s)	99, 300, 371, 663, 900, 1143, 1519
SatI	GCNGC	3 cut(s)	267, 1057, 1365
Sau3AI	GATC	9 cut(s)	169, 231, 283, 436, 445, 488, 834, 1197, 1498
ScrFI	CCNGG	1 cut(s)	963
SduI	GDGCHC	3 cut(s)	396, 539, 1159
SfaNI	GCATC	3 cut(s)	762, 988, 1254
SfcI	CTRYAG	1 cut(s)	264
SfuI	TTCGAA	1 cut(s)	738
SmiMI	CAYNNNNRTG	3 cut(s)	764, 933, 1419
SmlI	CTYRAG	7 cut(s)	134, 191, 370, 395, 695, 776, 828
SmoI	CTYRAG	7 cut(s)	134, 191, 370, 395, 695, 776, 828
SpeI	ACTAGT	1 cut(s)	44
Sse9I	AATT	8 cut(s)	182, 783, 805, 872, 990, 1175, 1350, 1407
SspMI	CTAG	6 cut(s)	45, 218, 492, 1205, 1268, 1341
SstI	GAGCTC	1 cut(s)	396
StyD4I	CCNGG	1 cut(s)	961
StyI	CCWWGG	1 cut(s)	1356
TaaI	ACNGT	3 cut(s)	31, 67, 1457
TaqI	TCGA	3 cut(s)	207, 515, 738
TasI	AATT	8 cut(s)	182, 783, 805, 872, 990, 1175, 1350, 1407
TatI	WGTACW	1 cut(s)	1438
TfiI	GAWTC	2 cut(s)	552, 1171
Tru1I	TTAA	7 cut(s)	99, 300, 371, 663, 900, 1143, 1519
Tru9I	TTAA	7 cut(s)	99, 300, 371, 663, 900, 1143, 1519
TscAI	CASTG	7 cut(s)	28, 184, 771, 923, 1159, 1300, 1400
TseFI	GTSAC	2 cut(s)	907, 1397
TseI	GCWGC	3 cut(s)	266, 1056, 1364
Tsp45I	GTSAC	2 cut(s)	907, 1397
TspDTI	ATGAA	9 cut(s)	630, 647, 882, 941, 999, 1007, 1012, 1202, 1376
TspRI	CASTG	7 cut(s)	28, 184, 771, 923, 1159, 1300, 1400
Vha464I	CTTAAG	1 cut(s)	370
XagI	CCTNNNNNAGG	1 cut(s)	517
XapI	RAATTY	5 cut(s)	182, 783, 805, 872, 990
XbaI	TCTAGA	1 cut(s)	491
XceI	RCATGY	2 cut(s)	1094, 1285
XcmI	CCANNNNNNNNNTGG	4 cut(s)	886, 1294, 1329, 1511
XmiI	GTMKAC	1 cut(s)	498
XmnI	GAANNNNTTC	2 cut(s)	213, 1263
XspI	CTAG	6 cut(s)	45, 218, 492, 1205, 1268, 1341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.