FvH4_3g19632

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0001194
Physical Location & Seq
Forward (+)
12709357 .. 12720826
11470 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g19632.t1

Sequence Viewer

Length: 2004 bp
ATGTCGCCAGGGCCTAGAAAAGATTATTGGCTAGCAAAACAAAAGGCGATAGTGGAGACACAAGCAAATTTGTTAGGGTCTTTCCCCGGAGGATATCCTCAACCATCTTTCCCCGGAAGATATCCCCAAACACCTTTCCCCGGTAGATATCCCCAAACACCATATCCCAGTGGATGTTACCAACCACCTTTTCCCGGTTACTATTATCCCCAACCACCTTCCACCGATGAATCTACAAACCCCATCGATGACAATGATCCTTTAAACACTGATTTCTTTTGGAAGCTGATTTCTGTGGTTCATTGTGCTATTGGAGCCAATATTCTTGTCTTCGGTGCCATTGTACTCTTGAAGGGTCATCAAGTGTCAGAGATGCCAGTTCACCGAATTGGTACTACATCCATAAGGGAGTGTTGGTACAAGAATTGTTGGCTATCCCTTTATGATCAAAACACAAGGATACATGCTACATGTTGTAACCTGGTAGCAAGGACTGCTCAAGTGAAGTATGAAGAACCTGACAGATCTCATGTGTATCAGCAATTCTCGGATCATGATAATGAGAATATAGCTCTTGTTGCCTCTATTGAGTTAGATGAGTTCCTTGAGGATGATGACTGTGATATCTCCATGCACGATAAGTGTTCTAGGTTAGTGTCTGCCTCTAAGTCCATGCTTGCAAAAATTGAAGCTCTCTCTAATGAGTTTTCAGAATGCAAGGAGACCAATGAAGGGATGCATGAGAAGTTGCTATCCCTCAAGTCAAAATGGAAGACAGAAAAGTCAACTCTTGAGGACTCCCTTAAGGAGCTATCCAGGATAGCACAGAGTCTTGCCATCCCAAAGCCAAAAATTCCAGCTAGGAATCCTCCTGCTAGGAGAAGAGCCAACCCTAAGGTAGGAAAGGCTAGGAGATCTTTTGAGACAAATTCTCTTGACAAACATGTTCGGGAACATGATTTTGATGATGACGATCTGTCATGTTTTGTTACAAGGTTCTCATCTCTGTTTCTTCATCCTCATTCTCTCGTATCCTCTCATTTCCTCTCCTCCATTCCCATGGCTGAACCAAACCAAAACTCTGCTGCAAAAGAAACCGGGTCCGTGACCTCTCCAATGGTTTCTTCTTCGCTCCCAGTGAATTCTGATCCCCTGCTTACTGCTTCTCAAGTGTTGAGAGCCTTCTCTTCCTCTCCGAGTTCTACTCCCATCTCCTCCGCTGCTGCTCCTCCATCCTTTGTCCTTGTACAAGTGGATTCTACTGTTGTTACAGCTCATCCCTCCCCCAAAGAGGTTGAAGCCTCCATTGCTGCAACATTGAACGAAATCAGGAAGAGAAAAGGCACGATTCATGCTGGGTCTGCTCGGGCCAAGAAGACCAAGCCTTCTGGCATAGGTCGCTCTCCAGGGATTCGTGATGCCTTTGCATCCCAACCCCAAGGATTTGCCAAGTCCGGTCCATCCTCCGCCGCCGCTGCCTCCAAATCTGCCAAGGCGTCACTTCCCAAGGTTGGTACAAAGTCCAAATTTCCAATCCTTGATGACGATGAGGAAGAAGAAGAGCCTATGGAGTTTTCAGGTTCCTCTAGTTCTGATCCAGAATTTCGCGCTCCTCGCCGACGAATTACTAGGATCTCCAGCAAGCCAATGGCCGGCTCTTCTAAGTCTGGATCGAAGGATTCCTCTGGACCCTCCAAACCTTCCAAAGCCAAGCCTATTGGAGCCCAGGATGGGAGACCCTCTTTGCCTCTTAAGAAAAGGATGTTTGAGGAGGCTGTCATTGGATTTCGAGATTATATTGGTCGTCAGTTCTACAGCTTCAAGAAGGAGATGCCTGAGATCTTAAGGGAATTTGAGCGCCGCAGAGATGAGGATGCCTCTGGTTCTTCCACTGCCTCTTCCCAGGATACGCGTGCCTACTCTGATCCTGATGATAAGGAGAGCGAGAGTGATGATGATGTGATCCGTAGGGAGCCCAGTGATGATGAGAATGCCTCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 gag_pre-integrs rve zf-CCHC

Protein Analysis

668

Amino Acids

73.42

Weight (kDa)

6.76

Isoelectric Point (pI)

57.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 781
AccB1I GGYRCC 1 cut(s) 335
AccII CGCG 2 cut(s) 1608, 1912
AciI CCGC 5 cut(s) 1218, 1467, 1470, 1473, 1861
AclWI GGATC 8 cut(s) 251, 558, 1142, 1589, 1640, 1678, 1919, 1957
AcoI YGGCCR 1 cut(s) 1650
AcsI RAATTY 7 cut(s) 67, 852, 928, 1141, 1526, 1601, 1850
AcyI GRCGYC 1 cut(s) 1496
AfaI GTAC 5 cut(s) 345, 394, 419, 1248, 1516
AfiI CCNNNNNNNGG 8 cut(s) 140, 194, 732, 899, 1291, 1511, 1652, 1731
AflII CTTAAG 3 cut(s) 803, 1751, 1843
AflIII ACRYGT 3 cut(s) 470, 943, 1910
AgsI TTSAA 5 cut(s) 352, 689, 1298, 1321, 1822
AhdI GACNNNNNGTC 1 cut(s) 976
AjnI CCWGG 6 cut(s) 7, 480, 815, 1405, 1725, 1902
AjuI GAANNNNNNNTTGG 6 cut(s) 10, 42, 174, 206, 1108, 1140
AluBI AGCT 7 cut(s) 286, 572, 692, 811, 860, 1274, 1818
AluI AGCT 7 cut(s) 286, 572, 692, 811, 860, 1274, 1818
Alw26I GTCTC 4 cut(s) 50, 716, 917, 1729
AlwI GGATC 8 cut(s) 251, 558, 1142, 1589, 1640, 1678, 1919, 1957
Ama87I CYCGRG 1 cut(s) 1365
AoxI GGCC 3 cut(s) 11, 1368, 1650
ApeKI GCWGC 5 cut(s) 1085, 1220, 1223, 1310, 1475
ApoI RAATTY 7 cut(s) 67, 852, 928, 1141, 1526, 1601, 1850
AspLEI GCGC 2 cut(s) 1610, 1860
AspS9I GGNCC 5 cut(s) 11, 1101, 1368, 1457, 1688
AsuC2I CCSGG 5 cut(s) 87, 114, 141, 195, 1099
AsuHPI GGTGA 1 cut(s) 374
AsuNHI GCTAGC 1 cut(s) 31
AvaI CYCGRG 1 cut(s) 1365
AvaII GGWCC 3 cut(s) 1101, 1457, 1688
AxyI CCTNAGG 1 cut(s) 894
BanI GGYRCC 1 cut(s) 335
BanII GRGCYC 2 cut(s) 1726, 1977
BbsI GAAGAC 3 cut(s) 322, 779, 1382
BbvI GCAGC 5 cut(s) 1072, 1207, 1210, 1297, 1462
BccI CCATC 7 cut(s) 112, 251, 845, 1217, 1240, 1468, 1724
BciT130I CCWGG 6 cut(s) 9, 482, 817, 1407, 1727, 1904
BciVI GTATCC 3 cut(s) 453, 1042, 1900
BclI TGATCA 1 cut(s) 445
BcnI CCSGG 5 cut(s) 87, 114, 141, 195, 1099
BcoDI GTCTC 4 cut(s) 50, 716, 917, 1729
BfaI CTAG 8 cut(s) 15, 32, 648, 861, 876, 909, 1587, 1629
BfmI CTRYAG 1 cut(s) 1813
BfoI RGCGCY 1 cut(s) 1861
BfrI CTTAAG 3 cut(s) 803, 1751, 1843
BfuI GTATCC 3 cut(s) 453, 1042, 1900
BglII AGATCT 3 cut(s) 524, 914, 1839
BisI GCNGC 8 cut(s) 1086, 1221, 1224, 1311, 1470, 1473, 1476, 1861
BlsI GCNGC 8 cut(s) 1087, 1222, 1225, 1312, 1471, 1474, 1477, 1862
Bme18I GGWCC 3 cut(s) 1101, 1457, 1688
BmeRI GACNNNNNGTC 1 cut(s) 976
BmeT110I CYCGRG 1 cut(s) 1365
BmgT120I GGNCC 5 cut(s) 11, 1101, 1368, 1457, 1688
BmiI GGNNCC 7 cut(s) 316, 337, 1102, 1582, 1690, 1723, 1974
BmrI ACTGGG 3 cut(s) 162, 1130, 1971
BmsI GCATC 6 cut(s) 363, 726, 1408, 1436, 1821, 1864
BmtI GCTAGC 1 cut(s) 35
BmuI ACTGGG 3 cut(s) 162, 1130, 1971
BpiI GAAGAC 3 cut(s) 322, 779, 1382
BplI GAGNNNNNCTC 5 cut(s) 1189, 1221, 1862, 1894, 1979
BpmI CTGGAG 2 cut(s) 1389, 1621
BpuEI CTTGAG 5 cut(s) 483, 626, 743, 812, 1152
BpuMI CCSGG 5 cut(s) 87, 114, 141, 195, 1099
Bsa29I ATCGAT 1 cut(s) 246
BsaBI GATNNNNATC 1 cut(s) 972
BsaHI GRCGYC 1 cut(s) 1496
BsaI GGTCTC 2 cut(s) 716, 1729
BsaWI WCCGGW 1 cut(s) 1454
BsaXI ACNNNNNCTCC 2 cut(s) 401, 431
Bsc4I CCNNNNNNNGG 8 cut(s) 140, 194, 732, 899, 1291, 1511, 1652, 1731
Bse118I RCCGGY 1 cut(s) 1652
Bse1I ACTGG 4 cut(s) 168, 377, 1136, 1977
Bse21I CCTNAGG 1 cut(s) 894
Bse3DI GCAATG 1 cut(s) 1305
Bse8I GATNNNNATC 1 cut(s) 972
BseBI CCWGG 6 cut(s) 9, 482, 817, 1407, 1727, 1904
BseCI ATCGAT 1 cut(s) 246
BseJI GATNNNNATC 1 cut(s) 972
BseLI CCNNNNNNNGG 8 cut(s) 140, 194, 732, 899, 1291, 1511, 1652, 1731
BseMI GCAATG 1 cut(s) 1305
BseMII CTCAG 1 cut(s) 1827
BseNI ACTGG 4 cut(s) 168, 377, 1136, 1977
BseRI GAGGAG 5 cut(s) 1039, 1204, 1218, 1602, 1784
BseXI GCAGC 5 cut(s) 1072, 1207, 1210, 1297, 1462
BseYI CCCAGC 1 cut(s) 1355
Bsh1236I CGCG 2 cut(s) 1608, 1912
BshFI GGCC 3 cut(s) 13, 1370, 1652
BshNI GGYRCC 1 cut(s) 335
BshVI ATCGAT 1 cut(s) 246
BsiHKCI CYCGRG 1 cut(s) 1365
BsiSI CCGG 7 cut(s) 87, 114, 141, 195, 1098, 1455, 1653
BslI CCNNNNNNNGG 8 cut(s) 140, 194, 732, 899, 1291, 1511, 1652, 1731
BsmAI GTCTC 4 cut(s) 50, 716, 917, 1729
BsmI GAATGC 2 cut(s) 719, 1996
BsnI GGCC 3 cut(s) 13, 1370, 1652
Bso31I GGTCTC 2 cut(s) 716, 1729
BsoBI CYCGRG 1 cut(s) 1365
Bsp1286I GDGCHC 2 cut(s) 1726, 1977
Bsp1407I TGTACA 1 cut(s) 1246
Bsp19I CCATGG 1 cut(s) 1059
BspACI CCGC 5 cut(s) 1218, 1467, 1470, 1473, 1861
BspANI GGCC 3 cut(s) 13, 1370, 1652
BspCNI CTCAG 1 cut(s) 1828
BspDI ATCGAT 1 cut(s) 246
BspFNI CGCG 2 cut(s) 1608, 1912
BspHI TCATGA 1 cut(s) 553
BspLI GGNNCC 7 cut(s) 316, 337, 1102, 1582, 1690, 1723, 1974
BspOI GCTAGC 1 cut(s) 35
BspPI GGATC 8 cut(s) 251, 558, 1142, 1589, 1640, 1678, 1919, 1957
BspQI GCTCTTC 3 cut(s) 877, 1554, 1663
BspT107I GGYRCC 1 cut(s) 335
BspTI CTTAAG 3 cut(s) 803, 1751, 1843
BspTNI GGTCTC 2 cut(s) 716, 1729
BsrDI GCAATG 1 cut(s) 1305
BsrFI RCCGGY 1 cut(s) 1652
BsrGI TGTACA 1 cut(s) 1246
BsrI ACTGG 4 cut(s) 168, 377, 1136, 1977
BssAI RCCGGY 1 cut(s) 1652
BssNI GRCGYC 1 cut(s) 1496
BssT1I CCWWGG 4 cut(s) 1059, 1438, 1491, 1506
Bst2UI CCWGG 6 cut(s) 9, 482, 817, 1407, 1727, 1904
Bst4CI ACNGT 2 cut(s) 620, 1264
Bst6I CTCTTC 6 cut(s) 877, 1192, 1328, 1554, 1663, 1903
BstACI GRCGYC 1 cut(s) 1496
BstAFI CTTAAG 3 cut(s) 803, 1751, 1843
BstAPI GCANNNNNTGC 1 cut(s) 494
BstAUI TGTACA 1 cut(s) 1246
BstC8I GCNNGC 5 cut(s) 33, 678, 1643, 1654, 1914
BstDEI CTNAG 5 cut(s) 666, 894, 1662, 1836, 2001
BstDSI CCRYGG 1 cut(s) 1059
BstENI CCTNNNNNAGG 1 cut(s) 897
BstFNI CGCG 2 cut(s) 1608, 1912
BstH2I RGCGCY 1 cut(s) 1861
BstHHI GCGC 2 cut(s) 1610, 1860
BstMAI GTCTC 4 cut(s) 50, 716, 917, 1729
BstMWI GCNNNNNNNGC 8 cut(s) 314, 494, 578, 1307, 1361, 1398, 1475, 1614
BstNI CCWGG 6 cut(s) 9, 482, 817, 1407, 1727, 1904
BstNSI RCATGY 3 cut(s) 467, 474, 947
BstSFI CTRYAG 1 cut(s) 1813
BstUI CGCG 2 cut(s) 1608, 1912
BstV1I GCAGC 5 cut(s) 1072, 1207, 1210, 1297, 1462
BstV2I GAAGAC 3 cut(s) 322, 779, 1382
BstX2I RGATCY 4 cut(s) 524, 914, 1632, 1839
BstXI CCANNNNNNTGG 1 cut(s) 1060
BstYI RGATCY 4 cut(s) 524, 914, 1632, 1839
Bsu15I ATCGAT 1 cut(s) 246
Bsu36I CCTNAGG 1 cut(s) 894
BsuI GTATCC 3 cut(s) 453, 1042, 1900
BsuRI GGCC 3 cut(s) 13, 1370, 1652
BsuTUI ATCGAT 1 cut(s) 246
BtgI CCRYGG 1 cut(s) 1059
BtsI GCAGTG 1 cut(s) 1890
BtsIMutI CAGTG 5 cut(s) 175, 267, 1143, 1890, 1984
Cac8I GCNNGC 5 cut(s) 33, 678, 1643, 1654, 1914
CciI TCATGA 1 cut(s) 553
CfoI GCGC 2 cut(s) 1610, 1860
Cfr10I RCCGGY 1 cut(s) 1652
Cfr13I GGNCC 5 cut(s) 11, 1101, 1368, 1457, 1688
ClaI ATCGAT 1 cut(s) 246
CseI GACGC 1 cut(s) 1485
CsiI ACCWGGT 1 cut(s) 480
Csp6I GTAC 5 cut(s) 344, 393, 418, 1247, 1515
CviQI GTAC 5 cut(s) 344, 393, 418, 1247, 1515
DdeI CTNAG 5 cut(s) 666, 894, 1662, 1836, 2001
DraI TTTAAA 1 cut(s) 264
DrdI GACNNNNNNGTC 1 cut(s) 781
DriI GACNNNNNGTC 1 cut(s) 976
DseDI GACNNNNNNGTC 1 cut(s) 781
EaeI YGGCCR 1 cut(s) 1650
Eam1104I CTCTTC 6 cut(s) 877, 1192, 1328, 1554, 1663, 1903
Eam1105I GACNNNNNGTC 1 cut(s) 976
EarI CTCTTC 6 cut(s) 877, 1192, 1328, 1554, 1663, 1903
EciI GGCGGA 1 cut(s) 1456
Eco130I CCWWGG 4 cut(s) 1059, 1438, 1491, 1506
Eco24I GRGCYC 2 cut(s) 1726, 1977
Eco31I GGTCTC 2 cut(s) 716, 1729
Eco32I GATATC 4 cut(s) 95, 122, 149, 625
Eco47I GGWCC 3 cut(s) 1101, 1457, 1688
Eco81I CCTNAGG 1 cut(s) 894
Eco88I CYCGRG 1 cut(s) 1365
EcoNI CCTNNNNNAGG 1 cut(s) 897
EcoO109I RGGNCCY 1 cut(s) 11
EcoRI GAATTC 1 cut(s) 1141
EcoRII CCWGG 6 cut(s) 7, 480, 815, 1405, 1725, 1902
EcoRV GATATC 4 cut(s) 95, 122, 149, 625
EcoT14I CCWWGG 4 cut(s) 1059, 1438, 1491, 1506
EcoT22I ATGCAT 1 cut(s) 741
EcoT38I GRGCYC 2 cut(s) 1726, 1977
ErhI CCWWGG 4 cut(s) 1059, 1438, 1491, 1506
FbaI TGATCA 1 cut(s) 445
Fnu4HI GCNGC 8 cut(s) 1086, 1221, 1224, 1311, 1470, 1473, 1476, 1861
FriOI GRGCYC 2 cut(s) 1726, 1977
Fsp4HI GCNGC 8 cut(s) 1086, 1221, 1224, 1311, 1470, 1473, 1476, 1861
FspBI CTAG 8 cut(s) 15, 32, 648, 861, 876, 909, 1587, 1629
GlaI GCGC 2 cut(s) 1609, 1859
GluI GCNGC 8 cut(s) 1086, 1221, 1224, 1311, 1470, 1473, 1476, 1861
GsaI CCCAGC 1 cut(s) 1359
GsuI CTGGAG 2 cut(s) 1389, 1621
HaeII RGCGCY 1 cut(s) 1861
HaeIII GGCC 3 cut(s) 13, 1370, 1652
HapII CCGG 7 cut(s) 87, 114, 141, 195, 1098, 1455, 1653
HgaI GACGC 1 cut(s) 1485
HhaI GCGC 2 cut(s) 1610, 1860
Hin1I GRCGYC 1 cut(s) 1496
Hin6I GCGC 2 cut(s) 1608, 1858
HinP1I GCGC 2 cut(s) 1608, 1858
HincII GTYRAC 1 cut(s) 786
HindII GTYRAC 1 cut(s) 786
HinfI GANTC 8 cut(s) 230, 797, 829, 865, 1256, 1348, 1411, 1679
HpaII CCGG 7 cut(s) 87, 114, 141, 195, 1098, 1455, 1653
HphI GGTGA 1 cut(s) 374
Hpy166II GTNNAC 2 cut(s) 382, 786
Hpy188I TCNGA 7 cut(s) 370, 550, 712, 1147, 1197, 1594, 1924
Hpy8I GTNNAC 2 cut(s) 382, 786
Hpy99I CGWCG 1 cut(s) 1623
HpyAV CCTTC 8 cut(s) 228, 346, 725, 1192, 1395, 1669, 1710, 1819
HpyCH4III ACNGT 2 cut(s) 620, 1264
HpyCH4V TGCA 7 cut(s) 634, 680, 717, 739, 1088, 1313, 1427
HpyF10VI GCNNNNNNNGC 8 cut(s) 314, 494, 578, 1307, 1361, 1398, 1475, 1614
HpyF3I CTNAG 5 cut(s) 666, 894, 1662, 1836, 2001
Hsp92I GRCGYC 1 cut(s) 1496
HspAI GCGC 2 cut(s) 1608, 1858
KroI GCCGGC 1 cut(s) 1652
KroNI GCCGGC 1 cut(s) 1654
Ksp22I TGATCA 1 cut(s) 445
LguI GCTCTTC 3 cut(s) 877, 1554, 1663
LmnI GCTCC 7 cut(s) 314, 808, 1137, 1231, 1615, 1721, 1972
Lsp1109I GCAGC 5 cut(s) 1072, 1207, 1210, 1297, 1462
LweI GCATC 6 cut(s) 363, 726, 1408, 1436, 1821, 1864
MabI ACCWGGT 1 cut(s) 480
MaeI CTAG 8 cut(s) 15, 32, 648, 861, 876, 909, 1587, 1629
MaeIII GTNAC 7 cut(s) 176, 197, 476, 988, 1105, 1267, 1497
MflI RGATCY 4 cut(s) 524, 914, 1632, 1839
MhlI GDGCHC 2 cut(s) 1726, 1977
MluI ACGCGT 1 cut(s) 1910
MlyI GAGTC 2 cut(s) 791, 838
Mph1103I ATGCAT 1 cut(s) 741
MroNI GCCGGC 1 cut(s) 1652
MseI TTAA 4 cut(s) 263, 804, 1752, 1844
MslI CAYNNNNRTG 2 cut(s) 558, 1058
MspA1I CMGCKG 2 cut(s) 1220, 1475
MspCI CTTAAG 3 cut(s) 803, 1751, 1843
MspI CCGG 7 cut(s) 87, 114, 141, 195, 1098, 1455, 1653
Mva1269I GAATGC 2 cut(s) 719, 1996
MvaI CCWGG 6 cut(s) 9, 482, 817, 1407, 1727, 1904
MvnI CGCG 2 cut(s) 1608, 1912
MwoI GCNNNNNNNGC 8 cut(s) 314, 494, 578, 1307, 1361, 1398, 1475, 1614
NaeI GCCGGC 1 cut(s) 1654
NciI CCSGG 5 cut(s) 87, 114, 141, 195, 1099
NcoI CCATGG 1 cut(s) 1059
NgoMIV GCCGGC 1 cut(s) 1652
NheI GCTAGC 1 cut(s) 31
NlaIV GGNNCC 7 cut(s) 316, 337, 1102, 1582, 1690, 1723, 1974
NmuCI GTSAC 2 cut(s) 1105, 1497
NsiI ATGCAT 1 cut(s) 741
NspI RCATGY 3 cut(s) 467, 474, 947
PagI TCATGA 1 cut(s) 553
PciI ACATGT 2 cut(s) 470, 943
PciSI GCTCTTC 3 cut(s) 877, 1554, 1663
PctI GAATGC 2 cut(s) 719, 1996
PdiI GCCGGC 1 cut(s) 1654
PfeI GAWTC 6 cut(s) 230, 865, 1256, 1348, 1411, 1679
PfoI TCCNGGA 1 cut(s) 815
PkrI GCNGC 8 cut(s) 1087, 1222, 1225, 1312, 1471, 1474, 1477, 1862
PleI GAGTC 2 cut(s) 791, 837
PpsI GAGTC 2 cut(s) 791, 837
PscI ACATGT 2 cut(s) 470, 943
Psp6I CCWGG 6 cut(s) 7, 480, 815, 1405, 1725, 1902
PspFI CCCAGC 1 cut(s) 1355
PspGI CCWGG 6 cut(s) 7, 480, 815, 1405, 1725, 1902
PspN4I GGNNCC 7 cut(s) 316, 337, 1102, 1582, 1690, 1723, 1974
PspPI GGNCC 5 cut(s) 11, 1101, 1368, 1457, 1688
PsuI RGATCY 4 cut(s) 524, 914, 1632, 1839
RsaI GTAC 5 cut(s) 345, 394, 419, 1248, 1516
RsaNI GTAC 5 cut(s) 344, 393, 418, 1247, 1515
RseI CAYNNNNRTG 2 cut(s) 558, 1058
SapI GCTCTTC 3 cut(s) 877, 1554, 1663
SaqAI TTAA 4 cut(s) 263, 804, 1752, 1844
SatI GCNGC 8 cut(s) 1086, 1221, 1224, 1311, 1470, 1473, 1476, 1861
Sau96I GGNCC 5 cut(s) 11, 1101, 1368, 1457, 1688
SchI GAGTC 2 cut(s) 791, 838
SduI GDGCHC 2 cut(s) 1726, 1977
SexAI ACCWGGT 1 cut(s) 480
SfaNI GCATC 6 cut(s) 363, 726, 1408, 1436, 1821, 1864
SfcI CTRYAG 1 cut(s) 1813
SinI GGWCC 3 cut(s) 1101, 1457, 1688
SmiMI CAYNNNNRTG 2 cut(s) 558, 1058
SmlI CTYRAG 8 cut(s) 498, 605, 758, 791, 803, 1167, 1751, 1843
SmoI CTYRAG 8 cut(s) 498, 605, 758, 791, 803, 1167, 1751, 1843
SsiI CCGC 5 cut(s) 1218, 1467, 1470, 1473, 1861
SspI AATATT 1 cut(s) 322
SspMI CTAG 8 cut(s) 15, 32, 648, 861, 876, 909, 1587, 1629
StyI CCWWGG 4 cut(s) 1059, 1438, 1491, 1506
TaaI ACNGT 2 cut(s) 620, 1264
TaqI TCGA 3 cut(s) 246, 1673, 1789
TatI WGTACW 2 cut(s) 343, 1246
TauI GCSGC 3 cut(s) 1472, 1475, 1863
TfiI GAWTC 6 cut(s) 230, 865, 1256, 1348, 1411, 1679
Tru1I TTAA 4 cut(s) 263, 804, 1752, 1844
Tru9I TTAA 4 cut(s) 263, 804, 1752, 1844
TscAI CASTG 5 cut(s) 175, 274, 1143, 1897, 1984
TseFI GTSAC 2 cut(s) 1105, 1497
TseI GCWGC 5 cut(s) 1085, 1220, 1223, 1310, 1475
Tsp45I GTSAC 2 cut(s) 1105, 1497
TspDTI ATGAA 6 cut(s) 243, 290, 525, 744, 1004, 1340
TspGWI ACGGA 2 cut(s) 1093, 1955
TspRI CASTG 5 cut(s) 175, 274, 1143, 1897, 1984
Vha464I CTTAAG 3 cut(s) 803, 1751, 1843
VpaK11BI GGWCC 3 cut(s) 1101, 1457, 1688
XagI CCTNNNNNAGG 1 cut(s) 897
XapI RAATTY 7 cut(s) 67, 852, 928, 1141, 1526, 1601, 1850
XceI RCATGY 3 cut(s) 467, 474, 947
XcmI CCANNNNNNNNNTGG 1 cut(s) 1645
XspI CTAG 8 cut(s) 15, 32, 648, 861, 876, 909, 1587, 1629
Zsp2I ATGCAT 1 cut(s) 741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.