No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 172, 701 |
| Acc65I | GGTACC | 1 cut(s) | 299 |
| AccB1I | GGYRCC | 3 cut(s) | 299, 1013, 1211 |
| AccBSI | CCGCTC | 1 cut(s) | 231 |
| AccI | GTMKAC | 3 cut(s) | 848, 995, 1349 |
| AccII | CGCG | 2 cut(s) | 111, 297 |
| AclWI | GGATC | 3 cut(s) | 533, 857, 1391 |
| AcoI | YGGCCR | 2 cut(s) | 1026, 1068 |
| AcsI | RAATTY | 1 cut(s) | 626 |
| AfaI | GTAC | 4 cut(s) | 301, 454, 1356, 1393 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 316, 333, 382, 548, 1056 |
| AgsI | TTSAA | 1 cut(s) | 1247 |
| AjnI | CCWGG | 2 cut(s) | 125, 767 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1308, 1340 |
| AluBI | AGCT | 4 cut(s) | 409, 880, 983, 1177 |
| AluI | AGCT | 4 cut(s) | 409, 880, 983, 1177 |
| Alw21I | GWGCWC | 3 cut(s) | 1035, 1179, 1375 |
| Alw26I | GTCTC | 8 cut(s) | 258, 297, 351, 403, 436, 597, 1233, 1316 |
| AlwI | GGATC | 3 cut(s) | 533, 857, 1391 |
| Ama87I | CYCGRG | 4 cut(s) | 393, 438, 658, 1230 |
| AoxI | GGCC | 9 cut(s) | 128, 234, 335, 384, 528, 770, 1026, 1068, 1089 |
| ApaI | GGGCCC | 1 cut(s) | 339 |
| ApeKI | GCWGC | 7 cut(s) | 35, 215, 266, 406, 466, 797, 1061 |
| ApoI | RAATTY | 1 cut(s) | 626 |
| Asp718I | GGTACC | 1 cut(s) | 299 |
| AspLEI | GCGC | 2 cut(s) | 309, 1381 |
| AspS9I | GGNCC | 5 cut(s) | 335, 336, 1141, 1169, 1276 |
| AsuC2I | CCSGG | 1 cut(s) | 1167 |
| AsuHPI | GGTGA | 4 cut(s) | 636, 902, 1073, 1424 |
| AvaI | CYCGRG | 4 cut(s) | 393, 438, 658, 1230 |
| AvaII | GGWCC | 3 cut(s) | 1141, 1169, 1276 |
| AxyI | CCTNAGG | 1 cut(s) | 873 |
| BaeGI | GKGCMC | 3 cut(s) | 339, 375, 1214 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 436, 469 |
| BanI | GGYRCC | 3 cut(s) | 299, 1013, 1211 |
| BanII | GRGCYC | 3 cut(s) | 339, 1167, 1179 |
| BbsI | GAAGAC | 1 cut(s) | 485 |
| Bbv12I | GWGCWC | 3 cut(s) | 1035, 1179, 1375 |
| BbvI | GCAGC | 7 cut(s) | 22, 202, 278, 418, 478, 784, 1048 |
| BccI | CCATC | 5 cut(s) | 32, 63, 265, 752, 955 |
| BceAI | ACGGC | 2 cut(s) | 1034, 1076 |
| BciT130I | CCWGG | 2 cut(s) | 127, 769 |
| BciVI | GTATCC | 1 cut(s) | 775 |
| BcnI | CCSGG | 1 cut(s) | 1167 |
| BcoDI | GTCTC | 8 cut(s) | 258, 297, 351, 403, 436, 597, 1233, 1316 |
| BfaI | CTAG | 6 cut(s) | 536, 824, 881, 1271, 1389, 1404 |
| BfoI | RGCGCY | 1 cut(s) | 310 |
| BfuI | GTATCC | 1 cut(s) | 775 |
| BmcAI | AGTACT | 1 cut(s) | 1393 |
| Bme1390I | CCNGG | 3 cut(s) | 127, 769, 1167 |
| Bme18I | GGWCC | 3 cut(s) | 1141, 1169, 1276 |
| BmeT110I | CYCGRG | 4 cut(s) | 393, 438, 658, 1230 |
| BmgT120I | GGNCC | 5 cut(s) | 335, 336, 1141, 1169, 1276 |
| BmiI | GGNNCC | 6 cut(s) | 301, 321, 337, 579, 1015, 1213 |
| BmrFI | CCNGG | 3 cut(s) | 127, 769, 1167 |
| BmrI | ACTGGG | 1 cut(s) | 64 |
| BmsI | GCATC | 2 cut(s) | 22, 1411 |
| BmuI | ACTGGG | 1 cut(s) | 64 |
| BpiI | GAAGAC | 1 cut(s) | 485 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 272, 304, 581, 613 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1173 |
| BpuEI | CTTGAG | 2 cut(s) | 146, 347 |
| BpuMI | CCSGG | 1 cut(s) | 1167 |
| BsaI | GGTCTC | 1 cut(s) | 436 |
| BsaJI | CCNNGG | 2 cut(s) | 767, 1279 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 115, 145, 841, 871 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 316, 333, 382, 548, 1056 |
| Bse118I | RCCGGY | 1 cut(s) | 1070 |
| Bse1I | ACTGG | 4 cut(s) | 70, 182, 1215, 1368 |
| Bse21I | CCTNAGG | 1 cut(s) | 873 |
| Bse3DI | GCAATG | 1 cut(s) | 723 |
| BseBI | CCWGG | 2 cut(s) | 127, 769 |
| BseDI | CCNNGG | 2 cut(s) | 767, 1279 |
| BseGI | GGATG | 4 cut(s) | 55, 289, 744, 947 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 316, 333, 382, 548, 1056 |
| BseMI | GCAATG | 1 cut(s) | 723 |
| BseMII | CTCAG | 4 cut(s) | 270, 1151, 1164, 1192 |
| BseNI | ACTGG | 4 cut(s) | 70, 182, 1215, 1368 |
| BseRI | GAGGAG | 2 cut(s) | 159, 424 |
| BseSI | GKGCMC | 3 cut(s) | 339, 375, 1214 |
| BseX3I | CGGCCG | 1 cut(s) | 1026 |
| BseXI | GCAGC | 7 cut(s) | 22, 202, 278, 418, 478, 784, 1048 |
| BsgI | GTGCAG | 1 cut(s) | 21 |
| Bsh1236I | CGCG | 2 cut(s) | 111, 297 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1029, 1075 |
| BshFI | GGCC | 9 cut(s) | 130, 236, 337, 386, 530, 772, 1028, 1070, 1091 |
| BshNI | GGYRCC | 3 cut(s) | 299, 1013, 1211 |
| BsiEI | CGRYCG | 2 cut(s) | 1029, 1075 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1035, 1179, 1375 |
| BsiHKCI | CYCGRG | 4 cut(s) | 393, 438, 658, 1230 |
| BsiSI | CCGG | 3 cut(s) | 1025, 1071, 1167 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 316, 333, 382, 548, 1056 |
| BsmAI | GTCTC | 8 cut(s) | 258, 297, 351, 403, 436, 597, 1233, 1316 |
| BsmBI | CGTCTC | 3 cut(s) | 258, 297, 1316 |
| BsnI | GGCC | 9 cut(s) | 130, 236, 337, 386, 530, 772, 1028, 1070, 1091 |
| Bso31I | GGTCTC | 1 cut(s) | 436 |
| BsoBI | CYCGRG | 4 cut(s) | 393, 438, 658, 1230 |
| Bsp120I | GGGCCC | 1 cut(s) | 335 |
| Bsp1286I | GDGCHC | 7 cut(s) | 339, 375, 1035, 1167, 1179, 1214, 1375 |
| Bsp143I | GATC | 5 cut(s) | 92, 538, 862, 1396, 1414 |
| BspANI | GGCC | 9 cut(s) | 130, 236, 337, 386, 530, 772, 1028, 1070, 1091 |
| BspCNI | CTCAG | 4 cut(s) | 271, 1150, 1165, 1191 |
| BspFNI | CGCG | 2 cut(s) | 111, 297 |
| BspHI | TCATGA | 1 cut(s) | 756 |
| BspLI | GGNNCC | 6 cut(s) | 301, 321, 337, 579, 1015, 1213 |
| BspPI | GGATC | 3 cut(s) | 533, 857, 1391 |
| BspQI | GCTCTTC | 1 cut(s) | 1201 |
| BspT107I | GGYRCC | 3 cut(s) | 299, 1013, 1211 |
| BspTNI | GGTCTC | 1 cut(s) | 436 |
| BsrBI | CCGCTC | 1 cut(s) | 231 |
| BsrDI | GCAATG | 1 cut(s) | 723 |
| BsrFI | RCCGGY | 1 cut(s) | 1070 |
| BsrI | ACTGG | 4 cut(s) | 70, 182, 1215, 1368 |
| BssAI | RCCGGY | 1 cut(s) | 1070 |
| BssECI | CCNNGG | 2 cut(s) | 767, 1279 |
| BssMI | GATC | 5 cut(s) | 92, 538, 862, 1396, 1414 |
| BssNAI | GTATAC | 2 cut(s) | 849, 996 |
| BssT1I | CCWWGG | 1 cut(s) | 1279 |
| Bst1107I | GTATAC | 2 cut(s) | 849, 996 |
| Bst2UI | CCWGG | 2 cut(s) | 127, 769 |
| Bst4CI | ACNGT | 7 cut(s) | 698, 754, 831, 937, 1007, 1258, 1354 |
| Bst6I | CTCTTC | 1 cut(s) | 1201 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1093 |
| BstC8I | GCNNGC | 3 cut(s) | 411, 985, 1089 |
| BstDEI | CTNAG | 7 cut(s) | 279, 583, 873, 1137, 1173, 1178, 1334 |
| BstF5I | GGATG | 4 cut(s) | 55, 289, 744, 947 |
| BstFNI | CGCG | 2 cut(s) | 111, 297 |
| BstH2I | RGCGCY | 1 cut(s) | 310 |
| BstHHI | GCGC | 2 cut(s) | 309, 1381 |
| BstKTI | GATC | 5 cut(s) | 95, 541, 865, 1399, 1417 |
| BstMAI | GTCTC | 8 cut(s) | 258, 297, 351, 403, 436, 597, 1233, 1316 |
| BstMBI | GATC | 5 cut(s) | 92, 538, 862, 1396, 1414 |
| BstMCI | CGRYCG | 2 cut(s) | 1029, 1075 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 212, 1067, 1093 |
| BstNI | CCWGG | 2 cut(s) | 127, 769 |
| BstNSI | RCATGY | 3 cut(s) | 20, 655, 721 |
| BstSCI | CCNGG | 3 cut(s) | 125, 767, 1165 |
| BstSLI | GKGCMC | 3 cut(s) | 339, 375, 1214 |
| BstUI | CGCG | 2 cut(s) | 111, 297 |
| BstV1I | GCAGC | 7 cut(s) | 22, 202, 278, 418, 478, 784, 1048 |
| BstV2I | GAAGAC | 1 cut(s) | 485 |
| BstX2I | RGATCY | 1 cut(s) | 538 |
| BstYI | RGATCY | 1 cut(s) | 538 |
| BstZ17I | GTATAC | 2 cut(s) | 849, 996 |
| BstZI | CGGCCG | 1 cut(s) | 1026 |
| Bsu36I | CCTNAGG | 1 cut(s) | 873 |
| BsuI | GTATCC | 1 cut(s) | 775 |
| BsuRI | GGCC | 9 cut(s) | 130, 236, 337, 386, 530, 772, 1028, 1070, 1091 |
| BtsCI | GGATG | 4 cut(s) | 55, 289, 744, 947 |
| BtsI | GCAGTG | 2 cut(s) | 792, 1116 |
| BtsIMutI | CAGTG | 9 cut(s) | 578, 712, 792, 897, 933, 1116, 1186, 1226, 1375 |
| Cac8I | GCNNGC | 3 cut(s) | 411, 985, 1089 |
| CciI | TCATGA | 1 cut(s) | 756 |
| CfoI | GCGC | 2 cut(s) | 309, 1381 |
| Cfr10I | RCCGGY | 1 cut(s) | 1070 |
| Cfr13I | GGNCC | 5 cut(s) | 335, 336, 1141, 1169, 1276 |
| Csp6I | GTAC | 4 cut(s) | 300, 453, 1355, 1392 |
| CviAII | CATG | 6 cut(s) | 17, 600, 652, 718, 757, 844 |
| CviQI | GTAC | 4 cut(s) | 300, 453, 1355, 1392 |
| DdeI | CTNAG | 7 cut(s) | 279, 583, 873, 1137, 1173, 1178, 1334 |
| DpnI | GATC | 5 cut(s) | 94, 540, 864, 1398, 1416 |
| DpnII | GATC | 5 cut(s) | 92, 538, 862, 1396, 1414 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 172, 701 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 172, 701 |
| EaeI | YGGCCR | 2 cut(s) | 1026, 1068 |
| EagI | CGGCCG | 1 cut(s) | 1026 |
| Eam1104I | CTCTTC | 1 cut(s) | 1201 |
| EarI | CTCTTC | 1 cut(s) | 1201 |
| EciI | GGCGGA | 2 cut(s) | 69, 855 |
| Ecl136II | GAGCTC | 1 cut(s) | 1177 |
| EclXI | CGGCCG | 1 cut(s) | 1026 |
| Eco130I | CCWWGG | 1 cut(s) | 1279 |
| Eco147I | AGGCCT | 2 cut(s) | 130, 772 |
| Eco24I | GRGCYC | 3 cut(s) | 339, 1167, 1179 |
| Eco31I | GGTCTC | 1 cut(s) | 436 |
| Eco32I | GATATC | 1 cut(s) | 841 |
| Eco47I | GGWCC | 3 cut(s) | 1141, 1169, 1276 |
| Eco52I | CGGCCG | 1 cut(s) | 1026 |
| Eco53kI | GAGCTC | 1 cut(s) | 1177 |
| Eco81I | CCTNAGG | 1 cut(s) | 873 |
| Eco88I | CYCGRG | 4 cut(s) | 393, 438, 658, 1230 |
| EcoICRI | GAGCTC | 1 cut(s) | 1177 |
| EcoO109I | RGGNCCY | 2 cut(s) | 336, 1276 |
| EcoRII | CCWGG | 2 cut(s) | 125, 767 |
| EcoRV | GATATC | 1 cut(s) | 841 |
| EcoT14I | CCWWGG | 1 cut(s) | 1279 |
| EcoT38I | GRGCYC | 3 cut(s) | 339, 1167, 1179 |
| ErhI | CCWWGG | 1 cut(s) | 1279 |
| Esp3I | CGTCTC | 3 cut(s) | 258, 297, 1316 |
| FaeI | CATG | 6 cut(s) | 20, 603, 655, 721, 760, 847 |
| FatI | CATG | 6 cut(s) | 16, 599, 651, 717, 756, 843 |
| FblI | GTMKAC | 3 cut(s) | 848, 995, 1349 |
| FokI | GGATG | 4 cut(s) | 42, 296, 731, 934 |
| FriOI | GRGCYC | 3 cut(s) | 339, 1167, 1179 |
| FspBI | CTAG | 6 cut(s) | 536, 824, 881, 1271, 1389, 1404 |
| GlaI | GCGC | 2 cut(s) | 308, 1380 |
| HaeII | RGCGCY | 1 cut(s) | 310 |
| HaeIII | GGCC | 9 cut(s) | 130, 236, 337, 386, 530, 772, 1028, 1070, 1091 |
| HapII | CCGG | 3 cut(s) | 1025, 1071, 1167 |
| HhaI | GCGC | 2 cut(s) | 309, 1381 |
| Hin1II | CATG | 6 cut(s) | 20, 603, 655, 721, 760, 847 |
| Hin6I | GCGC | 2 cut(s) | 307, 1379 |
| HinP1I | GCGC | 2 cut(s) | 307, 1379 |
| HpaII | CCGG | 3 cut(s) | 1025, 1071, 1167 |
| HphI | GGTGA | 4 cut(s) | 636, 902, 1073, 1424 |
| Hpy166II | GTNNAC | 4 cut(s) | 75, 849, 996, 1350 |
| Hpy188I | TCNGA | 4 cut(s) | 105, 280, 749, 819 |
| Hpy8I | GTNNAC | 4 cut(s) | 75, 849, 996, 1350 |
| Hpy99I | CGWCG | 1 cut(s) | 1157 |
| HpyAV | CCTTC | 5 cut(s) | 210, 258, 333, 1116, 1392 |
| HpyCH4III | ACNGT | 7 cut(s) | 698, 754, 831, 937, 1007, 1258, 1354 |
| HpyCH4V | TGCA | 5 cut(s) | 38, 266, 1054, 1224, 1340 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 212, 1067, 1093 |
| HpyF3I | CTNAG | 7 cut(s) | 279, 583, 873, 1137, 1173, 1178, 1334 |
| Hsp92II | CATG | 6 cut(s) | 20, 603, 655, 721, 760, 847 |
| HspAI | GCGC | 2 cut(s) | 307, 1379 |
| KpnI | GGTACC | 1 cut(s) | 303 |
| Kzo9I | GATC | 5 cut(s) | 92, 538, 862, 1396, 1414 |
| LguI | GCTCTTC | 1 cut(s) | 1201 |
| LmnI | GCTCC | 3 cut(s) | 325, 877, 1378 |
| Lsp1109I | GCAGC | 7 cut(s) | 22, 202, 278, 418, 478, 784, 1048 |
| LweI | GCATC | 2 cut(s) | 22, 1411 |
| MaeI | CTAG | 6 cut(s) | 536, 824, 881, 1271, 1389, 1404 |
| MaeIII | GTNAC | 2 cut(s) | 692, 1079 |
| MalI | GATC | 5 cut(s) | 94, 540, 864, 1398, 1416 |
| MbiI | CCGCTC | 1 cut(s) | 231 |
| MboI | GATC | 5 cut(s) | 92, 538, 862, 1396, 1414 |
| MboII | GAAGA | 6 cut(s) | 87, 485, 755, 989, 1188, 1253 |
| MflI | RGATCY | 1 cut(s) | 538 |
| MhlI | GDGCHC | 7 cut(s) | 339, 375, 1035, 1167, 1179, 1214, 1375 |
| MluCI | AATT | 6 cut(s) | 482, 607, 626, 637, 1020, 1204 |
| MmeI | TCCRAC | 1 cut(s) | 646 |
| MseI | TTAA | 3 cut(s) | 1019, 1188, 1203 |
| MspA1I | CMGCKG | 1 cut(s) | 215 |
| MspI | CCGG | 3 cut(s) | 1025, 1071, 1167 |
| MspR9I | CCNGG | 3 cut(s) | 127, 769, 1167 |
| MvaI | CCWGG | 2 cut(s) | 127, 769 |
| MvnI | CGCG | 2 cut(s) | 111, 297 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 212, 1067, 1093 |
| NciI | CCSGG | 1 cut(s) | 1167 |
| NdeII | GATC | 5 cut(s) | 92, 538, 862, 1396, 1414 |
| NlaIII | CATG | 6 cut(s) | 20, 603, 655, 721, 760, 847 |
| NlaIV | GGNNCC | 6 cut(s) | 301, 321, 337, 579, 1015, 1213 |
| NmeAIII | GCCGAG | 2 cut(s) | 212, 1054 |
| NmuCI | GTSAC | 2 cut(s) | 692, 1079 |
| NspI | RCATGY | 3 cut(s) | 20, 655, 721 |
| PaeR7I | CTCGAG | 3 cut(s) | 393, 438, 658 |
| PagI | TCATGA | 1 cut(s) | 756 |
| PceI | AGGCCT | 2 cut(s) | 130, 772 |
| PciSI | GCTCTTC | 1 cut(s) | 1201 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 97, 1306 |
| PfeI | GAWTC | 3 cut(s) | 62, 519, 760 |
| PpuMI | RGGWCCY | 1 cut(s) | 1276 |
| Psp124BI | GAGCTC | 1 cut(s) | 1179 |
| Psp5II | RGGWCCY | 1 cut(s) | 1276 |
| Psp6I | CCWGG | 2 cut(s) | 125, 767 |
| PspGI | CCWGG | 2 cut(s) | 125, 767 |
| PspN4I | GGNNCC | 6 cut(s) | 301, 321, 337, 579, 1015, 1213 |
| PspOMI | GGGCCC | 1 cut(s) | 335 |
| PspPI | GGNCC | 5 cut(s) | 335, 336, 1141, 1169, 1276 |
| PspPPI | RGGWCCY | 1 cut(s) | 1276 |
| PspXI | VCTCGAGB | 1 cut(s) | 658 |
| PsuI | RGATCY | 1 cut(s) | 538 |
| RsaI | GTAC | 4 cut(s) | 301, 454, 1356, 1393 |
| RsaNI | GTAC | 4 cut(s) | 300, 453, 1355, 1392 |
| SacI | GAGCTC | 1 cut(s) | 1179 |
| SapI | GCTCTTC | 1 cut(s) | 1201 |
| SaqAI | TTAA | 3 cut(s) | 1019, 1188, 1203 |
| Sau3AI | GATC | 5 cut(s) | 92, 538, 862, 1396, 1414 |
| Sau96I | GGNCC | 5 cut(s) | 335, 336, 1141, 1169, 1276 |
| ScaI | AGTACT | 1 cut(s) | 1393 |
| ScrFI | CCNGG | 3 cut(s) | 127, 769, 1167 |
| SduI | GDGCHC | 7 cut(s) | 339, 375, 1035, 1167, 1179, 1214, 1375 |
| SfaNI | GCATC | 2 cut(s) | 22, 1411 |
| Sfr274I | CTCGAG | 3 cut(s) | 393, 438, 658 |
| SinI | GGWCC | 3 cut(s) | 1141, 1169, 1276 |
| SlaI | CTCGAG | 3 cut(s) | 393, 438, 658 |
| SmlI | CTYRAG | 5 cut(s) | 161, 362, 393, 438, 658 |
| SmoI | CTYRAG | 5 cut(s) | 161, 362, 393, 438, 658 |
| Sse9I | AATT | 6 cut(s) | 482, 607, 626, 637, 1020, 1204 |
| SseBI | AGGCCT | 2 cut(s) | 130, 772 |
| SspMI | CTAG | 6 cut(s) | 536, 824, 881, 1271, 1389, 1404 |
| SstI | GAGCTC | 1 cut(s) | 1179 |
| StuI | AGGCCT | 2 cut(s) | 130, 772 |
| StyD4I | CCNGG | 3 cut(s) | 125, 767, 1165 |
| StyI | CCWWGG | 1 cut(s) | 1279 |
| TaaI | ACNGT | 7 cut(s) | 698, 754, 831, 937, 1007, 1258, 1354 |
| TaqI | TCGA | 8 cut(s) | 91, 176, 394, 439, 496, 522, 659, 1314 |
| TasI | AATT | 6 cut(s) | 482, 607, 626, 637, 1020, 1204 |
| TatI | WGTACW | 1 cut(s) | 1391 |
| TauI | GCSGC | 8 cut(s) | 51, 54, 85, 146, 149, 215, 312, 320 |
| TfiI | GAWTC | 3 cut(s) | 62, 519, 760 |
| Tru1I | TTAA | 3 cut(s) | 1019, 1188, 1203 |
| Tru9I | TTAA | 3 cut(s) | 1019, 1188, 1203 |
| TscAI | CASTG | 9 cut(s) | 578, 712, 799, 904, 940, 1123, 1186, 1226, 1375 |
| TseFI | GTSAC | 2 cut(s) | 692, 1079 |
| TseI | GCWGC | 7 cut(s) | 35, 215, 266, 406, 466, 797, 1061 |
| Tsp45I | GTSAC | 2 cut(s) | 692, 1079 |
| TspDTI | ATGAA | 3 cut(s) | 492, 525, 773 |
| TspGWI | ACGGA | 1 cut(s) | 1352 |
| TspRI | CASTG | 9 cut(s) | 578, 712, 799, 904, 940, 1123, 1186, 1226, 1375 |
| VpaK11BI | GGWCC | 3 cut(s) | 1141, 1169, 1276 |
| XapI | RAATTY | 1 cut(s) | 626 |
| XbaI | TCTAGA | 3 cut(s) | 535, 823, 1270 |
| XceI | RCATGY | 3 cut(s) | 20, 655, 721 |
| XhoI | CTCGAG | 3 cut(s) | 393, 438, 658 |
| XmiI | GTMKAC | 3 cut(s) | 848, 995, 1349 |
| XspI | CTAG | 6 cut(s) | 536, 824, 881, 1271, 1389, 1404 |
| ZrmI | AGTACT | 1 cut(s) | 1393 |