Rroxscaffold_2G00089190

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
11088847 .. 11092366
3520 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00089190.1

Sequence Viewer

Length: 1164 bp
ATGTTTGTGTGTTGTATTTTGATTCGGGGCGCCTACCTCCGCCGAGCATCCTCGGGAATTGGAAGATTCTCCTTCTTGGTCCACCATTTAAGCACCGTCGTCCCCTTCGGGTCCGAACTCTCCTCCGCCGCCGCTGCTCTCTCGGGTTCCGTTTGCCTCCGAGGCAGTTCCGGTCTCTCCTTCACTCGCTCGGCTTCGCCCCCACAACTCGGTCGGTCCTTCCTCGCCTGCTCCGCGGCCAAGCGTCCTCACCCTTCGGCCGCTCTGCTCCTTCCACGTCCCGGTCGTCCCAAGCCACCTAAACCCCGTAAGGATTCTCGTTTTGTGACTCATACTCAACGGGTTGATTATGAAACATATACTTGCTTGCGCCCGTGGTTTATGAAAACGTTTTACTTGTGGCTGAATTGGGTTCCTTATTTGCCGAGACTGTTCGCATTTTTTCGTTGGGAATCTGTGTTGGATGTGTTGCCCACTCCTAATCTCACCGTGGTTAGAGAGTTCTATGCTTGTTGTTCTCCCAAATATGCTGCGCGAGTTGACTTTCTTAATGCTGCTACTACTAATTGGATGCAATGTGGATATTCGTGGCGTCTCGGTCCCTTTCACACCCACCATTATTCGGGAAACGTTGGGTCTCCTTGCCCCTGTTTCCCGAGATGTCTGCAATTGATAAGGAGCTTGCAGCTTTATCTGTTGATACCGTTGTGGCTGCGATTTATGAGGATCGTCCCTATGCCACTCCCGTGGAGCTTCTGCGGTGCTCTTAGTGAGTTCTGTCGATTGTTGGGGCATTTGGTTCGTTCTTTGCTCTATCCTTCCACTCGAGCAAGCAAGATTACCTTGGAAGAAGCTCGTCTCATCTATGTTCTCAATGCCCAAGGGCCCTATCTTCCTCCCGAGCATTACATGTATACAACTATACGAAAAGCTGCCATTGAGGGTCATCAAATACGTCGGGCACAGCTTGATAGTGAAAGACAAGTAAAAAATTTGATAGACACAAGTGAGTTCAAGGAAGAAGATGGGAAAGGTATAGATATACCTTTTCTTGATTTGCAAAGCATACCAGATGCTACAGATAACTTCTCAGATGCTAATAAACTTGGACAAGGGGGGTATGGACCTGTTTACAAGGGGGAGTTTCCTGCTGGAGGTCAATAA

Protein Analysis

387

Amino Acids

43.7

Weight (kDa)

9.49

Isoelectric Point (pI)

55.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 29
AccBSI CCGCTC 1 cut(s) 263
AccI GTMKAC 1 cut(s) 914
AccII CGCG 2 cut(s) 236, 535
AciI CCGC 8 cut(s) 40, 126, 129, 132, 234, 236, 261, 759
AclI AACGTT 2 cut(s) 389, 630
AclWI GGATC 1 cut(s) 734
AcoI YGGCCR 2 cut(s) 237, 258
AcsI RAATTY 1 cut(s) 991
AcyI GRCGYC 2 cut(s) 30, 592
AfiI CCNNNNNNNGG 4 cut(s) 209, 281, 622, 1154
AflIII ACRYGT 1 cut(s) 909
AgsI TTSAA 1 cut(s) 1015
AjiI CACGTC 1 cut(s) 278
AleI CACNNNNGTG 1 cut(s) 745
AluBI AGCT 6 cut(s) 681, 688, 753, 854, 932, 967
AluI AGCT 6 cut(s) 681, 688, 753, 854, 932, 967
Alw21I GWGCWC 1 cut(s) 766
Alw26I GTCTC 5 cut(s) 179, 421, 599, 642, 863
AlwI GGATC 1 cut(s) 734
Ama87I CYCGRG 5 cut(s) 52, 142, 655, 825, 899
AoxI GGCC 3 cut(s) 237, 258, 884
ApaI GGGCCC 1 cut(s) 888
ApeKI GCWGC 6 cut(s) 134, 530, 554, 685, 712, 932
ApoI RAATTY 1 cut(s) 991
AspLEI GCGC 3 cut(s) 32, 372, 535
AspS9I GGNCC 7 cut(s) 79, 111, 216, 599, 884, 885, 1124
AsuC2I CCSGG 1 cut(s) 282
AsuHPI GGTGA 2 cut(s) 242, 478
AvaI CYCGRG 5 cut(s) 52, 142, 655, 825, 899
AvaII GGWCC 5 cut(s) 79, 111, 216, 599, 1124
BaeGI GKGCMC 2 cut(s) 888, 964
BaeI ACNNNNGTAYC 2 cut(s) 692, 725
BanI GGYRCC 1 cut(s) 29
BanII GRGCYC 1 cut(s) 888
Bbv12I GWGCWC 1 cut(s) 766
BbvI GCAGC 6 cut(s) 121, 517, 541, 697, 699, 919
BccI CCATC 1 cut(s) 1019
BcgI CGANNNNNNTGC 4 cut(s) 646, 680, 782, 816
BcnI CCSGG 1 cut(s) 282
BcoDI GTCTC 5 cut(s) 179, 421, 599, 642, 863
BfmI CTRYAG 1 cut(s) 1077
BfoI RGCGCY 1 cut(s) 33
BglI GCCNNNNNGGC 1 cut(s) 162
Bme1390I CCNGG 1 cut(s) 282
Bme18I GGWCC 5 cut(s) 79, 111, 216, 599, 1124
BmeT110I CYCGRG 5 cut(s) 52, 142, 655, 825, 899
BmgBI CACGTC 1 cut(s) 278
BmgT120I GGNCC 7 cut(s) 79, 111, 216, 599, 884, 885, 1124
BmiI GGNNCC 6 cut(s) 31, 112, 148, 414, 601, 886
BmrFI CCNGG 1 cut(s) 282
BmsI GCATC 4 cut(s) 56, 561, 1063, 1084
BpuMI CCSGG 1 cut(s) 282
BsaHI GRCGYC 2 cut(s) 30, 592
BsaI GGTCTC 2 cut(s) 179, 642
BsaJI CCNNGG 8 cut(s) 51, 160, 234, 374, 489, 746, 843, 880
BsaWI WCCGGW 1 cut(s) 170
Bsc4I CCNNNNNNNGG 4 cut(s) 209, 281, 622, 1154
Bse3DI GCAATG 1 cut(s) 581
BseDI CCNNGG 8 cut(s) 51, 160, 234, 374, 489, 746, 843, 880
BseGI GGATG 3 cut(s) 47, 469, 576
BseLI CCNNNNNNNGG 4 cut(s) 209, 281, 622, 1154
BseMI GCAATG 1 cut(s) 581
BseMII CTCAG 1 cut(s) 1104
BseRI GAGGAG 1 cut(s) 112
BseSI GKGCMC 2 cut(s) 888, 964
BseX3I CGGCCG 1 cut(s) 258
BseXI GCAGC 6 cut(s) 121, 517, 541, 697, 699, 919
Bsh1236I CGCG 2 cut(s) 236, 535
Bsh1285I CGRYCG 3 cut(s) 214, 261, 286
BshFI GGCC 3 cut(s) 239, 260, 886
BshNI GGYRCC 1 cut(s) 29
BsiEI CGRYCG 3 cut(s) 214, 261, 286
BsiHKAI GWGCWC 1 cut(s) 766
BsiHKCI CYCGRG 5 cut(s) 52, 142, 655, 825, 899
BsiSI CCGG 2 cut(s) 171, 282
BslFI GGGAC 5 cut(s) 86, 264, 273, 585, 716
BslI CCNNNNNNNGG 4 cut(s) 209, 281, 622, 1154
BsmAI GTCTC 5 cut(s) 179, 421, 599, 642, 863
BsmBI CGTCTC 2 cut(s) 599, 863
BsmFI GGGAC 5 cut(s) 86, 264, 273, 585, 716
BsnI GGCC 3 cut(s) 239, 260, 886
Bso31I GGTCTC 2 cut(s) 179, 642
BsoBI CYCGRG 5 cut(s) 52, 142, 655, 825, 899
Bsp120I GGGCCC 1 cut(s) 884
Bsp1286I GDGCHC 3 cut(s) 766, 888, 964
Bsp143I GATC 1 cut(s) 726
BspACI CCGC 8 cut(s) 40, 126, 129, 132, 234, 236, 261, 759
BspANI GGCC 3 cut(s) 239, 260, 886
BspCNI CTCAG 1 cut(s) 1103
BspFNI CGCG 2 cut(s) 236, 535
BspLI GGNNCC 6 cut(s) 31, 112, 148, 414, 601, 886
BspPI GGATC 1 cut(s) 734
BspT107I GGYRCC 1 cut(s) 29
BspTNI GGTCTC 2 cut(s) 179, 642
BsrBI CCGCTC 1 cut(s) 263
BsrDI GCAATG 1 cut(s) 581
BssECI CCNNGG 8 cut(s) 51, 160, 234, 374, 489, 746, 843, 880
BssMI GATC 1 cut(s) 726
BssNAI GTATAC 1 cut(s) 915
BssNI GRCGYC 2 cut(s) 30, 592
BssT1I CCWWGG 2 cut(s) 843, 880
Bst1107I GTATAC 1 cut(s) 915
Bst4CI ACNGT 4 cut(s) 97, 432, 490, 705
BstACI GRCGYC 2 cut(s) 30, 592
BstC8I GCNNGC 4 cut(s) 229, 368, 683, 832
BstDEI CTNAG 2 cut(s) 767, 1090
BstDSI CCRYGG 4 cut(s) 234, 374, 489, 746
BstENI CCTNNNNNAGG 1 cut(s) 1152
BstF5I GGATG 3 cut(s) 47, 469, 576
BstFNI CGCG 2 cut(s) 236, 535
BstH2I RGCGCY 1 cut(s) 33
BstHHI GCGC 3 cut(s) 32, 372, 535
BstKTI GATC 1 cut(s) 729
BstMAI GTCTC 5 cut(s) 179, 421, 599, 642, 863
BstMBI GATC 1 cut(s) 726
BstMCI CGRYCG 3 cut(s) 214, 261, 286
BstMWI GCNNNNNNNGC 3 cut(s) 134, 162, 233
BstNSI RCATGY 1 cut(s) 913
BstSCI CCNGG 1 cut(s) 280
BstSFI CTRYAG 1 cut(s) 1077
BstSLI GKGCMC 2 cut(s) 888, 964
BstUI CGCG 2 cut(s) 236, 535
BstV1I GCAGC 6 cut(s) 121, 517, 541, 697, 699, 919
BstXI CCANNNNNNTGG 1 cut(s) 747
BstZ17I GTATAC 1 cut(s) 915
BstZI CGGCCG 1 cut(s) 258
BsuRI GGCC 3 cut(s) 239, 260, 886
BtgI CCRYGG 4 cut(s) 234, 374, 489, 746
BtrI CACGTC 1 cut(s) 278
BtsCI GGATG 3 cut(s) 47, 469, 576
Cac8I GCNNGC 4 cut(s) 229, 368, 683, 832
CfoI GCGC 3 cut(s) 32, 372, 535
Cfr13I GGNCC 7 cut(s) 79, 111, 216, 599, 884, 885, 1124
Cfr42I CCGCGG 1 cut(s) 237
CseI GACGC 2 cut(s) 233, 581
CviAII CATG 1 cut(s) 910
DdeI CTNAG 2 cut(s) 767, 1090
DinI GGCGCC 1 cut(s) 31
DpnI GATC 1 cut(s) 728
DpnII GATC 1 cut(s) 726
EaeI YGGCCR 2 cut(s) 237, 258
EagI CGGCCG 1 cut(s) 258
EciI GGCGGA 2 cut(s) 29, 115
EclXI CGGCCG 1 cut(s) 258
Eco130I CCWWGG 2 cut(s) 843, 880
Eco24I GRGCYC 1 cut(s) 888
Eco31I GGTCTC 2 cut(s) 179, 642
Eco47I GGWCC 5 cut(s) 79, 111, 216, 599, 1124
Eco52I CGGCCG 1 cut(s) 258
Eco88I CYCGRG 5 cut(s) 52, 142, 655, 825, 899
EcoNI CCTNNNNNAGG 1 cut(s) 1152
EcoO109I RGGNCCY 2 cut(s) 884, 885
EcoT14I CCWWGG 2 cut(s) 843, 880
EcoT38I GRGCYC 1 cut(s) 888
EgeI GGCGCC 1 cut(s) 31
EheI GGCGCC 1 cut(s) 31
ErhI CCWWGG 2 cut(s) 843, 880
Esp3I CGTCTC 2 cut(s) 599, 863
FaeI CATG 1 cut(s) 913
FalI AAGNNNNNCTT 2 cut(s) 827, 859
FaqI GGGAC 5 cut(s) 86, 264, 273, 585, 716
FatI CATG 1 cut(s) 909
FblI GTMKAC 1 cut(s) 914
FokI GGATG 3 cut(s) 34, 476, 583
FriOI GRGCYC 1 cut(s) 888
GlaI GCGC 3 cut(s) 31, 371, 534
HaeII RGCGCY 1 cut(s) 33
HaeIII GGCC 3 cut(s) 239, 260, 886
HapII CCGG 2 cut(s) 171, 282
HgaI GACGC 2 cut(s) 233, 581
HhaI GCGC 3 cut(s) 32, 372, 535
Hin1I GRCGYC 2 cut(s) 30, 592
Hin1II CATG 1 cut(s) 913
Hin6I GCGC 3 cut(s) 30, 370, 533
HinP1I GCGC 3 cut(s) 30, 370, 533
HincII GTYRAC 1 cut(s) 541
HindII GTYRAC 1 cut(s) 541
HinfI GANTC 5 cut(s) 22, 66, 314, 328, 452
HpaII CCGG 2 cut(s) 171, 282
HphI GGTGA 2 cut(s) 242, 478
Hpy166II GTNNAC 4 cut(s) 82, 541, 915, 1132
Hpy188I TCNGA 3 cut(s) 115, 161, 1093
Hpy188III TCNNGA 5 cut(s) 54, 624, 655, 899, 1052
Hpy8I GTNNAC 4 cut(s) 82, 541, 915, 1132
Hpy99I CGWCG 2 cut(s) 101, 960
HpyAV CCTTC 7 cut(s) 82, 115, 190, 229, 264, 281, 828
HpyCH4III ACNGT 4 cut(s) 97, 432, 490, 705
HpyCH4IV ACGT 4 cut(s) 277, 389, 630, 955
HpyCH4V TGCA 4 cut(s) 574, 667, 685, 1060
HpyF10VI GCNNNNNNNGC 3 cut(s) 134, 162, 233
HpyF3I CTNAG 2 cut(s) 767, 1090
HpySE526I ACGT 4 cut(s) 277, 389, 630, 955
Hsp92I GRCGYC 2 cut(s) 30, 592
Hsp92II CATG 1 cut(s) 913
HspAI GCGC 3 cut(s) 30, 370, 533
KasI GGCGCC 1 cut(s) 29
KspI CCGCGG 1 cut(s) 237
Kzo9I GATC 1 cut(s) 726
LmnI GCTCC 4 cut(s) 236, 273, 678, 750
LpnPI CCDG 7 cut(s) 184, 241, 295, 661, 1083, 1137, 1140
Lsp1109I GCAGC 6 cut(s) 121, 517, 541, 697, 699, 919
LweI GCATC 4 cut(s) 56, 561, 1063, 1084
MaeII ACGT 4 cut(s) 277, 389, 630, 955
MaeIII GTNAC 1 cut(s) 325
MalI GATC 1 cut(s) 728
MbiI CCGCTC 1 cut(s) 263
MboI GATC 1 cut(s) 726
MboII GAAGA 5 cut(s) 75, 860, 884, 1031, 1034
MfeI CAATTG 1 cut(s) 668
MhlI GDGCHC 3 cut(s) 766, 888, 964
MluCI AATT 5 cut(s) 57, 406, 565, 668, 991
Mly113I GGCGCC 1 cut(s) 30
MlyI GAGTC 1 cut(s) 322
MmeI TCCRAC 1 cut(s) 441
MseI TTAA 2 cut(s) 89, 549
MslI CAYNNNNRTG 1 cut(s) 745
MspA1I CMGCKG 2 cut(s) 134, 236
MspI CCGG 2 cut(s) 171, 282
MspR9I CCNGG 1 cut(s) 282
MunI CAATTG 1 cut(s) 668
MvnI CGCG 2 cut(s) 236, 535
MwoI GCNNNNNNNGC 3 cut(s) 134, 162, 233
NarI GGCGCC 1 cut(s) 30
NciI CCSGG 1 cut(s) 282
NdeII GATC 1 cut(s) 726
NlaIII CATG 1 cut(s) 913
NlaIV GGNNCC 6 cut(s) 31, 112, 148, 414, 601, 886
NmeAIII GCCGAG 3 cut(s) 68, 170, 450
NmuCI GTSAC 1 cut(s) 325
NspI RCATGY 1 cut(s) 913
OliI CACNNNNGTG 1 cut(s) 745
PaeR7I CTCGAG 1 cut(s) 825
PciI ACATGT 1 cut(s) 909
PcsI WCGNNNNNNNCGW 1 cut(s) 283
PfeI GAWTC 4 cut(s) 22, 66, 314, 452
PleI GAGTC 1 cut(s) 322
PluTI GGCGCC 1 cut(s) 33
PpsI GAGTC 1 cut(s) 322
PscI ACATGT 1 cut(s) 909
Psp1406I AACGTT 2 cut(s) 389, 630
PspN4I GGNNCC 6 cut(s) 31, 112, 148, 414, 601, 886
PspOMI GGGCCC 1 cut(s) 884
PspPI GGNCC 7 cut(s) 79, 111, 216, 599, 884, 885, 1124
PspXI VCTCGAGB 1 cut(s) 825
RseI CAYNNNNRTG 1 cut(s) 745
SacII CCGCGG 1 cut(s) 237
SaqAI TTAA 2 cut(s) 89, 549
Sau3AI GATC 1 cut(s) 726
Sau96I GGNCC 7 cut(s) 79, 111, 216, 599, 884, 885, 1124
SchI GAGTC 1 cut(s) 322
ScrFI CCNGG 1 cut(s) 282
SduI GDGCHC 3 cut(s) 766, 888, 964
SfaNI GCATC 4 cut(s) 56, 561, 1063, 1084
SfcI CTRYAG 1 cut(s) 1077
SfoI GGCGCC 1 cut(s) 31
Sfr274I CTCGAG 1 cut(s) 825
Sfr303I CCGCGG 1 cut(s) 237
SgrBI CCGCGG 1 cut(s) 237
SinI GGWCC 5 cut(s) 79, 111, 216, 599, 1124
SlaI CTCGAG 1 cut(s) 825
SmiMI CAYNNNNRTG 1 cut(s) 745
SmlI CTYRAG 1 cut(s) 825
SmoI CTYRAG 1 cut(s) 825
Sse9I AATT 5 cut(s) 57, 406, 565, 668, 991
SsiI CCGC 8 cut(s) 40, 126, 129, 132, 234, 236, 261, 759
SspDI GGCGCC 1 cut(s) 29
StyD4I CCNGG 1 cut(s) 280
StyI CCWWGG 2 cut(s) 843, 880
TaaI ACNGT 4 cut(s) 97, 432, 490, 705
TaiI ACGT 4 cut(s) 280, 392, 633, 958
TaqI TCGA 2 cut(s) 781, 826
TaqII GACCGA 3 cut(s) 200, 204, 587
TasI AATT 5 cut(s) 57, 406, 565, 668, 991
TauI GCSGC 4 cut(s) 131, 134, 239, 263
TfiI GAWTC 4 cut(s) 22, 66, 314, 452
Tru1I TTAA 2 cut(s) 89, 549
Tru9I TTAA 2 cut(s) 89, 549
TseFI GTSAC 1 cut(s) 325
TseI GCWGC 6 cut(s) 134, 530, 554, 685, 712, 932
Tsp45I GTSAC 1 cut(s) 325
TspDTI ATGAA 2 cut(s) 366, 398
TspGWI ACGGA 1 cut(s) 139
VpaK11BI GGWCC 5 cut(s) 79, 111, 216, 599, 1124
XagI CCTNNNNNAGG 1 cut(s) 1152
XapI RAATTY 1 cut(s) 991
XceI RCATGY 1 cut(s) 913
XhoI CTCGAG 1 cut(s) 825
XmiI GTMKAC 1 cut(s) 914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.