U5 small nuclear ribonucleoprotein 200 kDa
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| BRR2_plug | PF21188 | 120 - 185 | 1.6e-09 | Pre-mRNA-splicing helicase BRR2 plug domain |
| Helicase_PWI | PF18149 | 276 - 386 | 1.2e-33 | N-terminal helicase PWI domain |
| DEAD | PF00270 | 516 - 694 | 2.1e-32 | DEAD/DEAH box helicase |
| ResIII | PF04851 | 516 - 690 | 8.4e-13 | Type III restriction enzyme, res subunit |
| Helicase_C | PF00271 | 805 - 893 | 2.5e-09 | Helicase conserved C-terminal domain |
| WHD_SNRNP200 | PF23445 | 924 - 1000 | 6.1e-24 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 1016 - 1319 | 9.3e-100 | Sec63 Brl domain |
| DEAD | PF00270 | 1361 - 1534 | 2.5e-30 | DEAD/DEAH box helicase |
| ResIII | PF04851 | 1361 - 1497 | 1.4e-11 | Type III restriction enzyme, res subunit |
| WHD_SNRNP200 | PF23445 | 1762 - 1843 | 2e-38 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 1850 - 2165 | 1.5e-70 | Sec63 Brl domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1710, 5424 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 965, 4302 |
| Acc36I | ACCTGC | 4 cut(s) | 1218, 4087, 4789, 5862 |
| AccB1I | GGYRCC | 2 cut(s) | 288, 4859 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 4960, 5092 |
| AccI | GTMKAC | 2 cut(s) | 1563, 6440 |
| AccII | CGCG | 3 cut(s) | 246, 361, 1664 |
| AccIII | TCCGGA | 1 cut(s) | 1390 |
| AcoI | YGGCCR | 2 cut(s) | 101, 5122 |
| AcsI | RAATTY | 6 cut(s) | 2382, 3170, 3873, 4042, 4705, 4932 |
| AcvI | CACGTG | 1 cut(s) | 107 |
| AcyI | GRCGYC | 3 cut(s) | 289, 3370, 3482 |
| AdeI | CACNNNGTG | 1 cut(s) | 4655 |
| AflII | CTTAAG | 1 cut(s) | 461 |
| AflIII | ACRYGT | 3 cut(s) | 3667, 4315, 4435 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 5005 |
| AjnI | CCWGG | 7 cut(s) | 78, 1314, 3051, 4651, 5378, 5430, 5695 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 3527, 3559, 5822, 5854 |
| AleI | CACNNNNGTG | 1 cut(s) | 533 |
| Alw21I | GWGCWC | 5 cut(s) | 315, 1058, 1609, 3385, 6021 |
| Alw44I | GTGCAC | 2 cut(s) | 1054, 1605 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2527, 6118, 6425 |
| Ama87I | CYCGRG | 1 cut(s) | 73 |
| Aor13HI | TCCGGA | 1 cut(s) | 1390 |
| ApaLI | GTGCAC | 2 cut(s) | 1054, 1605 |
| ApoI | RAATTY | 6 cut(s) | 2382, 3170, 3873, 4042, 4705, 4932 |
| AseI | ATTAAT | 1 cut(s) | 3279 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 1046, 2385, 3816, 3885, 5133, 6108 |
| AspLEI | GCGC | 7 cut(s) | 37, 246, 291, 1666, 4662, 4953, 5791 |
| AsuC2I | CCSGG | 3 cut(s) | 43, 5126, 6275 |
| AvaI | CYCGRG | 1 cut(s) | 73 |
| AvaII | GGWCC | 9 cut(s) | 82, 1150, 4295, 4496, 4887, 5382, 5842, 5854, 6256 |
| BaeGI | GKGCMC | 3 cut(s) | 1058, 1443, 1609 |
| BanI | GGYRCC | 2 cut(s) | 288, 4859 |
| BanII | GRGCYC | 5 cut(s) | 123, 1513, 3267, 3385, 6021 |
| BauI | CACGAG | 2 cut(s) | 116, 2307 |
| BbrPI | CACGTG | 1 cut(s) | 107 |
| BbsI | GAAGAC | 6 cut(s) | 684, 2370, 2680, 3365, 4093, 5636 |
| Bbv12I | GWGCWC | 5 cut(s) | 315, 1058, 1609, 3385, 6021 |
| BceAI | ACGGC | 3 cut(s) | 4283, 4648, 5059 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 236, 270, 4238, 4272 |
| BciT130I | CCWGG | 7 cut(s) | 80, 1316, 3053, 4653, 5380, 5432, 5697 |
| BciVI | GTATCC | 4 cut(s) | 2858, 3996, 6303, 6328 |
| BclI | TGATCA | 5 cut(s) | 567, 1816, 3009, 4993, 5724 |
| BcnI | CCSGG | 3 cut(s) | 43, 5126, 6275 |
| BfaI | CTAG | 7 cut(s) | 1173, 1266, 2001, 3212, 4521, 5834, 5933 |
| BfmI | CTRYAG | 6 cut(s) | 184, 4851, 5165, 5520, 5993, 6417 |
| BfoI | RGCGCY | 1 cut(s) | 292 |
| BfrI | CTTAAG | 1 cut(s) | 461 |
| BfuAI | ACCTGC | 4 cut(s) | 1218, 4087, 4789, 5862 |
| BfuI | GTATCC | 4 cut(s) | 2858, 3996, 6303, 6328 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1169 |
| BlpI | GCTNAGC | 1 cut(s) | 1320 |
| Bme18I | GGWCC | 9 cut(s) | 82, 1150, 4295, 4496, 4887, 5382, 5842, 5854, 6256 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 5005 |
| BmeT110I | CYCGRG | 1 cut(s) | 73 |
| BmiI | GGNNCC | 8 cut(s) | 261, 290, 296, 4498, 4861, 5107, 5831, 6414 |
| BmrI | ACTGGG | 3 cut(s) | 1623, 3261, 4658 |
| BmuI | ACTGGG | 3 cut(s) | 1623, 3261, 4658 |
| BoxI | GACNNNNGTC | 3 cut(s) | 757, 3054, 4097 |
| BpiI | GAAGAC | 6 cut(s) | 684, 2370, 2680, 3365, 4093, 5636 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1303, 1335, 5841, 5873 |
| BpmI | CTGGAG | 3 cut(s) | 977, 4374, 5414 |
| Bpu10I | CCTNAGC | 1 cut(s) | 5193 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1320 |
| BpuEI | CTTGAG | 4 cut(s) | 2266, 4256, 4382, 5669 |
| BpuMI | CCSGG | 3 cut(s) | 43, 5126, 6275 |
| Bsa29I | ATCGAT | 2 cut(s) | 846, 3840 |
| BsaAI | YACGTR | 3 cut(s) | 107, 2894, 4316 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2708, 3846, 4379 |
| BsaHI | GRCGYC | 3 cut(s) | 289, 3370, 3482 |
| BsaI | GGTCTC | 1 cut(s) | 4310 |
| BsaWI | WCCGGW | 2 cut(s) | 1390, 2040 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1097, 1127 |
| Bse118I | RCCGGY | 3 cut(s) | 125, 291, 1035 |
| Bse3DI | GCAATG | 6 cut(s) | 2192, 2422, 4236, 4734, 5892, 5914 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2708, 3846, 4379 |
| BseAI | TCCGGA | 1 cut(s) | 1390 |
| BseBI | CCWGG | 7 cut(s) | 80, 1316, 3053, 4653, 5380, 5432, 5697 |
| BseCI | ATCGAT | 2 cut(s) | 846, 3840 |
| BseJI | GATNNNNATC | 3 cut(s) | 2708, 3846, 4379 |
| BseMI | GCAATG | 6 cut(s) | 2192, 2422, 4236, 4734, 5892, 5914 |
| BseRI | GAGGAG | 7 cut(s) | 258, 317, 701, 1118, 1232, 3981, 4910 |
| BseSI | GKGCMC | 3 cut(s) | 1058, 1443, 1609 |
| BseYI | CCCAGC | 6 cut(s) | 1412, 2243, 2462, 3365, 5825, 6224 |
| BsgI | GTGCAG | 5 cut(s) | 1652, 2688, 3692, 4128, 4194 |
| Bsh1236I | CGCG | 3 cut(s) | 246, 361, 1664 |
| Bsh1285I | CGRYCG | 1 cut(s) | 5598 |
| BshNI | GGYRCC | 2 cut(s) | 288, 4859 |
| BshVI | ATCGAT | 2 cut(s) | 846, 3840 |
| BsiEI | CGRYCG | 1 cut(s) | 5598 |
| BsiHKAI | GWGCWC | 5 cut(s) | 315, 1058, 1609, 3385, 6021 |
| BsiHKCI | CYCGRG | 1 cut(s) | 73 |
| BsiSI | CCGG | 9 cut(s) | 43, 126, 134, 292, 1036, 1391, 2041, 5125, 6275 |
| BslFI | GGGAC | 4 cut(s) | 1271, 2135, 3146, 4482 |
| BsmBI | CGTCTC | 2 cut(s) | 350, 5495 |
| BsmFI | GGGAC | 4 cut(s) | 1271, 2135, 3146, 4482 |
| BsmI | GAATGC | 2 cut(s) | 2812, 5273 |
| Bso31I | GGTCTC | 1 cut(s) | 4310 |
| BsoBI | CYCGRG | 1 cut(s) | 73 |
| Bsp1286I | GDGCHC | 9 cut(s) | 123, 315, 1058, 1443, 1513, 1609, 3267, 3385, 6021 |
| Bsp13I | TCCGGA | 1 cut(s) | 1390 |
| Bsp1407I | TGTACA | 3 cut(s) | 2518, 4233, 5391 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1320 |
| Bsp19I | CCATGG | 2 cut(s) | 3499, 4954 |
| BspDI | ATCGAT | 2 cut(s) | 846, 3840 |
| BspEI | TCCGGA | 1 cut(s) | 1390 |
| BspFNI | CGCG | 3 cut(s) | 246, 361, 1664 |
| BspHI | TCATGA | 3 cut(s) | 1963, 3808, 5046 |
| BspLI | GGNNCC | 8 cut(s) | 261, 290, 296, 4498, 4861, 5107, 5831, 6414 |
| BspMAI | CTGCAG | 2 cut(s) | 5169, 6421 |
| BspMI | ACCTGC | 4 cut(s) | 1218, 4087, 4789, 5862 |
| BspQI | GCTCTTC | 2 cut(s) | 1304, 3255 |
| BspT107I | GGYRCC | 2 cut(s) | 288, 4859 |
| BspTI | CTTAAG | 1 cut(s) | 461 |
| BspTNI | GGTCTC | 1 cut(s) | 4310 |
| BsrDI | GCAATG | 6 cut(s) | 2192, 2422, 4236, 4734, 5892, 5914 |
| BsrFI | RCCGGY | 3 cut(s) | 125, 291, 1035 |
| BsrGI | TGTACA | 3 cut(s) | 2518, 4233, 5391 |
| BssAI | RCCGGY | 3 cut(s) | 125, 291, 1035 |
| BssNAI | GTATAC | 1 cut(s) | 6441 |
| BssNI | GRCGYC | 3 cut(s) | 289, 3370, 3482 |
| BssSI | CACGAG | 2 cut(s) | 116, 2307 |
| BssT1I | CCWWGG | 5 cut(s) | 3499, 4596, 4954, 6287, 6303 |
| Bst1107I | GTATAC | 1 cut(s) | 6441 |
| Bst2BI | CACGAG | 2 cut(s) | 116, 2307 |
| Bst2UI | CCWGG | 7 cut(s) | 80, 1316, 3053, 4653, 5380, 5432, 5697 |
| BstACI | GRCGYC | 3 cut(s) | 289, 3370, 3482 |
| BstAFI | CTTAAG | 1 cut(s) | 461 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 4181 |
| BstAUI | TGTACA | 3 cut(s) | 2518, 4233, 5391 |
| BstBAI | YACGTR | 3 cut(s) | 107, 2894, 4316 |
| BstDSI | CCRYGG | 3 cut(s) | 321, 3499, 4954 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 4248 |
| BstFNI | CGCG | 3 cut(s) | 246, 361, 1664 |
| BstH2I | RGCGCY | 1 cut(s) | 292 |
| BstHHI | GCGC | 7 cut(s) | 37, 246, 291, 1666, 4662, 4953, 5791 |
| BstMCI | CGRYCG | 1 cut(s) | 5598 |
| BstNI | CCWGG | 7 cut(s) | 80, 1316, 3053, 4653, 5380, 5432, 5697 |
| BstNSI | RCATGY | 7 cut(s) | 2519, 2890, 3671, 4225, 4439, 4766, 4814 |
| BstPAI | GACNNNNGTC | 3 cut(s) | 757, 3054, 4097 |
| BstSFI | CTRYAG | 6 cut(s) | 184, 4851, 5165, 5520, 5993, 6417 |
| BstSLI | GKGCMC | 3 cut(s) | 1058, 1443, 1609 |
| BstSNI | TACGTA | 1 cut(s) | 2894 |
| BstUI | CGCG | 3 cut(s) | 246, 361, 1664 |
| BstV2I | GAAGAC | 6 cut(s) | 684, 2370, 2680, 3365, 4093, 5636 |
| BstX2I | RGATCY | 5 cut(s) | 939, 2497, 4600, 4831, 5767 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 3500, 4398, 4481 |
| BstYI | RGATCY | 5 cut(s) | 939, 2497, 4600, 4831, 5767 |
| BstZ17I | GTATAC | 1 cut(s) | 6441 |
| Bsu15I | ATCGAT | 2 cut(s) | 846, 3840 |
| BsuI | GTATCC | 4 cut(s) | 2858, 3996, 6303, 6328 |
| BsuTUI | ATCGAT | 2 cut(s) | 846, 3840 |
| BtgI | CCRYGG | 3 cut(s) | 321, 3499, 4954 |
| BtgZI | GCGATG | 1 cut(s) | 606 |
| BtsI | GCAGTG | 3 cut(s) | 315, 4746, 4946 |
| BveI | ACCTGC | 4 cut(s) | 1218, 4087, 4789, 5862 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2527, 6118, 6425 |
| CciI | TCATGA | 3 cut(s) | 1963, 3808, 5046 |
| CfoI | GCGC | 7 cut(s) | 37, 246, 291, 1666, 4662, 4953, 5791 |
| Cfr10I | RCCGGY | 3 cut(s) | 125, 291, 1035 |
| ClaI | ATCGAT | 2 cut(s) | 846, 3840 |
| CpoI | CGGWCCG | 1 cut(s) | 4887 |
| CseI | GACGC | 5 cut(s) | 367, 1106, 3359, 3490, 4102 |
| CsiI | ACCWGGT | 1 cut(s) | 4651 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 4567, 4602 |
| CspI | CGGWCCG | 1 cut(s) | 4887 |
| DinI | GGCGCC | 1 cut(s) | 290 |
| DraIII | CACNNNGTG | 1 cut(s) | 4655 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 965, 4302 |
| DriI | GACNNNNNGTC | 1 cut(s) | 5005 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 965, 4302 |
| EaeI | YGGCCR | 2 cut(s) | 101, 5122 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 5005 |
| EciI | GGCGGA | 2 cut(s) | 455, 4860 |
| Ecl136II | GAGCTC | 2 cut(s) | 3383, 6019 |
| Eco105I | TACGTA | 1 cut(s) | 2894 |
| Eco130I | CCWWGG | 5 cut(s) | 3499, 4596, 4954, 6287, 6303 |
| Eco147I | AGGCCT | 1 cut(s) | 4208 |
| Eco24I | GRGCYC | 5 cut(s) | 123, 1513, 3267, 3385, 6021 |
| Eco31I | GGTCTC | 1 cut(s) | 4310 |
| Eco32I | GATATC | 2 cut(s) | 873, 1885 |
| Eco47I | GGWCC | 9 cut(s) | 82, 1150, 4295, 4496, 4887, 5382, 5842, 5854, 6256 |
| Eco53kI | GAGCTC | 2 cut(s) | 3383, 6019 |
| Eco72I | CACGTG | 1 cut(s) | 107 |
| Eco88I | CYCGRG | 1 cut(s) | 73 |
| EcoICRI | GAGCTC | 2 cut(s) | 3383, 6019 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 4248 |
| EcoO109I | RGGNCCY | 3 cut(s) | 180, 1976, 5854 |
| EcoRI | GAATTC | 1 cut(s) | 4042 |
| EcoRII | CCWGG | 7 cut(s) | 78, 1314, 3051, 4651, 5378, 5430, 5695 |
| EcoRV | GATATC | 2 cut(s) | 873, 1885 |
| EcoT14I | CCWWGG | 5 cut(s) | 3499, 4596, 4954, 6287, 6303 |
| EcoT38I | GRGCYC | 5 cut(s) | 123, 1513, 3267, 3385, 6021 |
| EgeI | GGCGCC | 1 cut(s) | 290 |
| EheI | GGCGCC | 1 cut(s) | 290 |
| ErhI | CCWWGG | 5 cut(s) | 3499, 4596, 4954, 6287, 6303 |
| Esp3I | CGTCTC | 2 cut(s) | 350, 5495 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 6384, 6416 |
| FaqI | GGGAC | 4 cut(s) | 1271, 2135, 3146, 4482 |
| FauI | CCCGC | 5 cut(s) | 354, 401, 1450, 4823, 6384 |
| FauNDI | CATATG | 2 cut(s) | 2440, 4169 |
| FbaI | TGATCA | 5 cut(s) | 567, 1816, 3009, 4993, 5724 |
| FblI | GTMKAC | 2 cut(s) | 1563, 6440 |
| FriOI | GRGCYC | 5 cut(s) | 123, 1513, 3267, 3385, 6021 |
| FspBI | CTAG | 7 cut(s) | 1173, 1266, 2001, 3212, 4521, 5834, 5933 |
| GlaI | GCGC | 7 cut(s) | 36, 245, 290, 1665, 4661, 4952, 5790 |
| GsaI | CCCAGC | 6 cut(s) | 1416, 2247, 2466, 3369, 5829, 6228 |
| GsuI | CTGGAG | 3 cut(s) | 977, 4374, 5414 |
| HaeII | RGCGCY | 1 cut(s) | 292 |
| HapII | CCGG | 9 cut(s) | 43, 126, 134, 292, 1036, 1391, 2041, 5125, 6275 |
| HgaI | GACGC | 5 cut(s) | 367, 1106, 3359, 3490, 4102 |
| HhaI | GCGC | 7 cut(s) | 37, 246, 291, 1666, 4662, 4953, 5791 |
| Hin1I | GRCGYC | 3 cut(s) | 289, 3370, 3482 |
| Hin6I | GCGC | 7 cut(s) | 35, 244, 289, 1664, 4660, 4951, 5789 |
| HinP1I | GCGC | 7 cut(s) | 35, 244, 289, 1664, 4660, 4951, 5789 |
| HincII | GTYRAC | 3 cut(s) | 2486, 3457, 5010 |
| HindII | GTYRAC | 3 cut(s) | 2486, 3457, 5010 |
| HindIII | AAGCTT | 5 cut(s) | 879, 917, 3314, 5195, 6398 |
| HpaI | GTTAAC | 1 cut(s) | 3457 |
| HpaII | CCGG | 9 cut(s) | 43, 126, 134, 292, 1036, 1391, 2041, 5125, 6275 |
| Hpy99I | CGWCG | 2 cut(s) | 1727, 4000 |
| HpyCH4IV | ACGT | 4 cut(s) | 106, 1722, 2893, 4315 |
| HpySE526I | ACGT | 4 cut(s) | 106, 1722, 2893, 4315 |
| Hsp92I | GRCGYC | 3 cut(s) | 289, 3370, 3482 |
| HspAI | GCGC | 7 cut(s) | 35, 244, 289, 1664, 4660, 4951, 5789 |
| KasI | GGCGCC | 1 cut(s) | 288 |
| Kpn2I | TCCGGA | 1 cut(s) | 1390 |
| KroI | GCCGGC | 1 cut(s) | 291 |
| KroNI | GCCGGC | 1 cut(s) | 293 |
| Ksp22I | TGATCA | 5 cut(s) | 567, 1816, 3009, 4993, 5724 |
| KspAI | GTTAAC | 1 cut(s) | 3457 |
| LguI | GCTCTTC | 2 cut(s) | 1304, 3255 |
| MabI | ACCWGGT | 1 cut(s) | 4651 |
| MaeI | CTAG | 7 cut(s) | 1173, 1266, 2001, 3212, 4521, 5834, 5933 |
| MaeII | ACGT | 4 cut(s) | 106, 1722, 2893, 4315 |
| MfeI | CAATTG | 2 cut(s) | 1143, 2801 |
| MflI | RGATCY | 5 cut(s) | 939, 2497, 4600, 4831, 5767 |
| MhlI | GDGCHC | 9 cut(s) | 123, 315, 1058, 1443, 1513, 1609, 3267, 3385, 6021 |
| Mly113I | GGCGCC | 1 cut(s) | 289 |
| MlyI | GAGTC | 8 cut(s) | 89, 146, 767, 1822, 1843, 4876, 5975, 6455 |
| MmeI | TCCRAC | 7 cut(s) | 186, 2924, 3510, 3897, 3987, 4019, 6183 |
| MroI | TCCGGA | 1 cut(s) | 1390 |
| MroNI | GCCGGC | 1 cut(s) | 291 |
| MroXI | GAANNNNTTC | 6 cut(s) | 1046, 2385, 3816, 3885, 5133, 6108 |
| MslI | CAYNNNNRTG | 4 cut(s) | 533, 3750, 5036, 6185 |
| MspA1I | CMGCKG | 2 cut(s) | 1324, 3310 |
| MspCI | CTTAAG | 1 cut(s) | 461 |
| MspI | CCGG | 9 cut(s) | 43, 126, 134, 292, 1036, 1391, 2041, 5125, 6275 |
| MunI | CAATTG | 2 cut(s) | 1143, 2801 |
| Mva1269I | GAATGC | 2 cut(s) | 2812, 5273 |
| MvaI | CCWGG | 7 cut(s) | 80, 1316, 3053, 4653, 5380, 5432, 5697 |
| MvnI | CGCG | 3 cut(s) | 246, 361, 1664 |
| NaeI | GCCGGC | 1 cut(s) | 293 |
| NarI | GGCGCC | 1 cut(s) | 289 |
| NciI | CCSGG | 3 cut(s) | 43, 5126, 6275 |
| NcoI | CCATGG | 2 cut(s) | 3499, 4954 |
| NdeI | CATATG | 2 cut(s) | 2440, 4169 |
| NgoMIV | GCCGGC | 1 cut(s) | 291 |
| NlaIV | GGNNCC | 8 cut(s) | 261, 290, 296, 4498, 4861, 5107, 5831, 6414 |
| NmeAIII | GCCGAG | 3 cut(s) | 79, 4393, 4888 |
| NmuCI | GTSAC | 9 cut(s) | 107, 1792, 1861, 1927, 3181, 3933, 5492, 5978, 6458 |
| NspI | RCATGY | 7 cut(s) | 2519, 2890, 3671, 4225, 4439, 4766, 4814 |
| OliI | CACNNNNGTG | 1 cut(s) | 533 |
| PaeI | GCATGC | 1 cut(s) | 4225 |
| PaeR7I | CTCGAG | 1 cut(s) | 73 |
| PagI | TCATGA | 3 cut(s) | 1963, 3808, 5046 |
| PceI | AGGCCT | 1 cut(s) | 4208 |
| PciI | ACATGT | 2 cut(s) | 3667, 4435 |
| PciSI | GCTCTTC | 2 cut(s) | 1304, 3255 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 365, 2314, 2890 |
| PctI | GAATGC | 2 cut(s) | 2812, 5273 |
| PdiI | GCCGGC | 1 cut(s) | 293 |
| PdmI | GAANNNNTTC | 6 cut(s) | 1046, 2385, 3816, 3885, 5133, 6108 |
| PflFI | GACNNNGTC | 1 cut(s) | 4130 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 4960, 5092 |
| Ple19I | CGATCG | 1 cut(s) | 5598 |
| PleI | GAGTC | 8 cut(s) | 89, 145, 766, 1822, 1843, 4875, 5975, 6455 |
| PluTI | GGCGCC | 1 cut(s) | 292 |
| PmaCI | CACGTG | 1 cut(s) | 107 |
| PmlI | CACGTG | 1 cut(s) | 107 |
| PpsI | GAGTC | 2 cut(s) | 89, 145 |
| Ppu21I | YACGTR | 3 cut(s) | 107, 2894, 4316 |
| PpuMI | RGGWCCY | 1 cut(s) | 5854 |
| PscI | ACATGT | 2 cut(s) | 3667, 4435 |
| PshAI | GACNNNNGTC | 3 cut(s) | 757, 3054, 4097 |
| PshBI | ATTAAT | 1 cut(s) | 3279 |
| PsiI | TTATAA | 2 cut(s) | 1710, 5424 |
| Psp124BI | GAGCTC | 2 cut(s) | 3385, 6021 |
| Psp5II | RGGWCCY | 1 cut(s) | 5854 |
| Psp6I | CCWGG | 7 cut(s) | 78, 1314, 3051, 4651, 5378, 5430, 5695 |
| PspCI | CACGTG | 1 cut(s) | 107 |
| PspFI | CCCAGC | 6 cut(s) | 1412, 2243, 2462, 3365, 5825, 6224 |
| PspGI | CCWGG | 7 cut(s) | 78, 1314, 3051, 4651, 5378, 5430, 5695 |
| PspN4I | GGNNCC | 8 cut(s) | 261, 290, 296, 4498, 4861, 5107, 5831, 6414 |
| PspPPI | RGGWCCY | 1 cut(s) | 5854 |
| PspXI | VCTCGAGB | 1 cut(s) | 73 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3082, 3114 |
| PstI | CTGCAG | 2 cut(s) | 5169, 6421 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2527, 6118, 6425 |
| PsuI | RGATCY | 5 cut(s) | 939, 2497, 4600, 4831, 5767 |
| PsyI | GACNNNGTC | 1 cut(s) | 4130 |
| PvuI | CGATCG | 1 cut(s) | 5598 |
| PvuII | CAGCTG | 2 cut(s) | 1324, 3310 |
| RseI | CAYNNNNRTG | 4 cut(s) | 533, 3750, 5036, 6185 |
| Rsr2I | CGGWCCG | 1 cut(s) | 4887 |
| RsrII | CGGWCCG | 1 cut(s) | 4887 |
| SacI | GAGCTC | 2 cut(s) | 3385, 6021 |
| SapI | GCTCTTC | 2 cut(s) | 1304, 3255 |
| SchI | GAGTC | 8 cut(s) | 89, 146, 767, 1822, 1843, 4876, 5975, 6455 |
| SduI | GDGCHC | 9 cut(s) | 123, 315, 1058, 1443, 1513, 1609, 3267, 3385, 6021 |
| SexAI | ACCWGGT | 1 cut(s) | 4651 |
| SfcI | CTRYAG | 6 cut(s) | 184, 4851, 5165, 5520, 5993, 6417 |
| SfoI | GGCGCC | 1 cut(s) | 290 |
| Sfr274I | CTCGAG | 1 cut(s) | 73 |
| SgrAI | CRCCGGYG | 1 cut(s) | 125 |
| SinI | GGWCC | 9 cut(s) | 82, 1150, 4295, 4496, 4887, 5382, 5842, 5854, 6256 |
| SlaI | CTCGAG | 1 cut(s) | 73 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 533, 3750, 5036, 6185 |
| SmlI | CTYRAG | 6 cut(s) | 73, 461, 2281, 4271, 4361, 5648 |
| SmoI | CTYRAG | 6 cut(s) | 73, 461, 2281, 4271, 4361, 5648 |
| SnaBI | TACGTA | 1 cut(s) | 2894 |
| SphI | GCATGC | 1 cut(s) | 4225 |
| SseBI | AGGCCT | 1 cut(s) | 4208 |
| SspDI | GGCGCC | 1 cut(s) | 288 |
| SspI | AATATT | 3 cut(s) | 1365, 3815, 5114 |
| SspMI | CTAG | 7 cut(s) | 1173, 1266, 2001, 3212, 4521, 5834, 5933 |
| SstI | GAGCTC | 2 cut(s) | 3385, 6021 |
| StuI | AGGCCT | 1 cut(s) | 4208 |
| StyI | CCWWGG | 5 cut(s) | 3499, 4596, 4954, 6287, 6303 |
| TaiI | ACGT | 4 cut(s) | 109, 1725, 2896, 4318 |
| TatI | WGTACW | 5 cut(s) | 60, 2518, 4233, 5028, 5391 |
| TauI | GCSGC | 3 cut(s) | 199, 368, 440 |
| TseFI | GTSAC | 9 cut(s) | 107, 1792, 1861, 1927, 3181, 3933, 5492, 5978, 6458 |
| Tsp45I | GTSAC | 9 cut(s) | 107, 1792, 1861, 1927, 3181, 3933, 5492, 5978, 6458 |
| TspGWI | ACGGA | 4 cut(s) | 338, 3613, 3896, 4013 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4130 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 4960, 5092 |
| Vha464I | CTTAAG | 1 cut(s) | 461 |
| VneI | GTGCAC | 2 cut(s) | 1054, 1605 |
| VpaK11BI | GGWCC | 9 cut(s) | 82, 1150, 4295, 4496, 4887, 5382, 5842, 5854, 6256 |
| VspI | ATTAAT | 1 cut(s) | 3279 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 4248 |
| XapI | RAATTY | 6 cut(s) | 2382, 3170, 3873, 4042, 4705, 4932 |
| XceI | RCATGY | 7 cut(s) | 2519, 2890, 3671, 4225, 4439, 4766, 4814 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 76, 3726, 4481, 5117 |
| XhoI | CTCGAG | 1 cut(s) | 73 |
| XmiI | GTMKAC | 2 cut(s) | 1563, 6440 |
| XmnI | GAANNNNTTC | 6 cut(s) | 1046, 2385, 3816, 3885, 5133, 6108 |
| XspI | CTAG | 7 cut(s) | 1173, 1266, 2001, 3212, 4521, 5834, 5933 |