Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00903

Orthogroup ID

OG0000802

Physical Location & Seq

Genomic Coordinates Forward (+)

10718 .. 16949

Gene Structure 6232 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G020040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3147 bp

ATGATGTACCAACAACTTCCTTTCCTATTGACTGACATCAGTCAATTTGTGTCCAGATTGGCAAATCAATTGAATGCTGTCAATTTGTGTTCTTGCCACTGGTTGGGATACACCATCCTACCCGCGTATATTCGCATGTCAAGGAATCCTACGCTCTATATCCATTCTGCTGCAACCATCTTGGAGAACAACAATTTGATCAAGTATGACAGAAAAAGTGGATATTTCCAGGTCACAGACTTGGGTCGCATTGCTTGCCATTACTACATAACTCATGGGACAATATCGACATATAATGAGCATTTGAAGCCAACTATGGGGGATATTGAACTTTATCAATTGTTCTCCTTCAGTGAAGAGTTCAAGTATGTCACTGTGCGGCCGGATGAAAATATGGAACTTGTAAAACTATCGGAATGTGTTCCCATTCCGGTCAAGGAGAGCCTGAAAGATCCCAGTTGCAAGATTAATGTTTTGCTGCAAGCATATATTGCACAGCTGAAATTTGAAGGGTTTTCATTGACACAAGATATGGTTTTGATTACACAGAGTGCTGGGCGTCTTGTACTCGCTCTTTTCAAGATCGTTTTGAAACGAGGATGGGCTCAACTTGCAGACAAGGCTTTGAACTTGTGTAAAATGGTTAGCAAGAGGATGTGGAGTGTCCAAATACTTCTTCGCCAATTCCATGGAATAACAAAAGATATCTTGGTGAAGTTGGAGAAGAATAATTTGGCCCGGTATTATGACCTCTCTTCAGAGGAGCTGGGGGAGCTTATAAAGATGCCAAAGATGGGAAAAACACTTCATAAGTTCATCCACAAGTTCCCCAAATTAAACCTTGCAGCACATGTGCAGCCAATTACTCGAACTGTACTGAGGGTTGAGCTTACTATAGCGCCTGACTTTCAATGGGAGGACAAATTTCATGGCTTCGTGGAATGCCATCATGAATATTTTTTGCTGAAGAAGCAGTATATTGATGACGATCATACTTTGAACTTCACTGTTCAAACTGTTTTACCTGTTTCTTTCAGGTACCTCATTTTACCTGAAAAGTATCCTCCACCAACAGAGTTATTGGACCTGCAACCACTTCCTGTGACCACATTAAGGAATCCGCTATATGAAGCTCTTTATCAAGATTTCAAGCAGTTTAATACTGTCCAGACTCAGGTCTTCACTGTTTTGTATAATTCTGATGACAATACCATTTCTGATGAGTTTGCTGTATTGAGGGATCATCAGAAGGCCTCTGAAAGTGTCATTGTGTATATTGTCCATGTTGAAGGTCTTGCCAAGGAACGGCACACTGACTGGAAAAAGAAGTTTGGAATATATGGGACCAAACTCTCAAGTACTCTTGCAAATGCCAAGGATGTTGGAGGATGGATAGGGGCTACCTCTCATGGCCTTTTCAATTTTCCTCCTGGGGTTGATATAGCTAATCATGAAGCAAGGATACAAGCTATGACAAAACCAACGAACAGTGCAATTGTTCAACATGCCAAGAATGGAAAACCAGCTCTTGTGTATGTTCCTACTAGGAAACATAGTTCAAATGCAAATGGGAACGCCTCCTTTCTGTTGCGGTCTCTAAAAGAGATAGAGCCTTTCATTGAGAAAATTAGCAATGAAAAGTTGCAAGACGCTTTGCGGCATGGAGTGGGCTTCTTGCATCAGGGACTAACCATATATTCAATTATGTGTCATGAGCAGTTGTCAGCCCATTTGGTGGTTGTGATGGGAACTCAATATTATGATGGCCGGGAAAATCTTCACGCTGATTACCCAATTGCTGATCTCTTGCAGATGATTTGTCTTGCCTGTCGCCCTAATAAAGATAGTTCTGGGAAATGTGTCATCCTCTGCCATGCTCCTCGTAAAGAATACTACAAGAAGTTCTTATATGAAGCATTGCCTGTTGAAAGCCATTTGCACAATTACCTACATGACAATATAAATGCAGAAGTTGTGGCACAAGTAATTGGGAACCATGAAGGGGCTCTCCATTACCTGACGTGGACTTTTTTCTACAGGAGGCTGACACAAAATCCCAACTATTATAATCTTCAGGGAGTTACGCATGCGCATATTTCTGAGTACCTTTCAGAGCATGTTGAAAACACACTGAGTGACCTGGAAACAAGCAAGTGTGTTGCTGTCGAGGATGGCGACGTTTCTGCCTTAAATCTTGGCATAATAGCTTCATATTATTATATCAGTTATTCTACAATTGAGCGTTTCAGTTTGTCCTTAACTTCCAAAACAAAGATGCAGGGTCTTCTTGAGATTCTAGCTCATGCTTCAGAGTATTCACAACTTTCCATACGACCTGGAGAGGAAGAGGTGATTCGAAGGTTGATTAACCACCAGAGATTTTCCTTCGATAATCCCGACTGCACAGATCCTCACGTCAAAGCATATGCTCTTCTCCAGGCTCATTTTGCAAGGCATCATGTGGCTGGGAACCTATCACTGGACCAGCGTGAGGTTCTCCTTTCTGCAAGTAGGTTGCTTCACGCAATGGTTGATGTTGCTTCCACCAATGGATGGCTAAACCTCTCTCTCCTAGCAATGGAAGTCAGCCAGATGGTCACGCAGGGGATGTGGGATCGTGACTCGATGCTTCTACAGCTTCCTCACTTCACAAGGGAGCTGGCGAAGAGAAGCCAAGAATTTCCTGGAAAGAATATAGAGAGGGTATCTGATATGGTTGACATGGAGTATGATGAGAGGCGTGAACTACTTCGGGAATTGGAGGATATTGAACAATTTTGCAAACGATTTCCCAACATTGGAATGACATGTAAGGTGCTGGGGAGTGAGAATGTAAGAGCTGGGGAGGAAGTCACTTTGCAAGTTGATATGACTAGGTATCCCAGGACCAAAGAAGAGGGGTGGTGGCTAGTAGTCGGGGACACCAAGACTAACTCACTGCTTGCCATTAAGGGAGTTCCCCTACTAAAGAAGGCGAAGGTCCAGCTTAGATTTTTGGCTCCTGCAGAAGCTGGAAAGAAGACATACACACTGTATTTCATGTGTGATTCATATTTGGGGTGTGATGAGGAACATAACTTCACTGTCAATATTAAAGAACCAGCAACCCCTGATGAAGACGATGCAGACACTGAGATGAGAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000354 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005682 GO:0005911 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009506 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022613 GO:0022618 GO:0030054 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0042623 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0046540 GO:0055044 GO:0065003 GO:0070013 GO:0070035 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0097526 GO:0120114 GO:0140098 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD Helicase_C Sec63

Protein Analysis

1048

Amino Acids

119.98

Weight (kDa)

6.47

Isoelectric Point (pI)

41.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec63	PF02889	79 - 338	2.9e-67	Sec63 Brl domain
WHD_SNRNP200	PF23445	643 - 724	8.6e-33	Winged Helix-turn-helix domain
Sec63	PF02889	730 - 1027	5.2e-66	Sec63 Brl domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000802)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20960 AT1G20960 AT2G42270
fragaria_vesca	FvH4_5g21940 FvH4_5g30070 FvH4_6g00860 FvH4_6g00860 FvH4_6g47200
malus_domestica	MD04G1240400.v1.1 MD09G1062900.v1.1 MD09G1063000.v1.1 MD12G1257300.v1.1
prunus_persica	Prupe.6G358100_v2.0.a1 Prupe.6G358100_v2.0.a1
pyrus_communis	pycom04g21210 pycom04g21230 pycom111g05330 pycom12g23600 pycom12g23620
rosa_chinensis	RchiOBHm_Chr2g0166221 RchiOBHm_Chr3g0448041 RchiOBHm_Chr3g0448351 RchiOBHm_Chr5g0014801 RchiOBHm_Chr7g0209461
rosa_laevigata	RLG00000003133 RLG00000021598 RLG00000021599 RLG00000025925 RLG00000025950 RLG00000025953 RLG00000032142
rosa_multiflora	Rmu_co8520521.1_g000001 Rmu_sc0005582.1_g000009 Rmu_sc0005969.1_g000018 Rmu_sc0015167.1_g000007 Rmu_ssc0000323.1_g000031
rosa_roxburghii	Rroxscaffold_1G00061750 Rroxscaffold_2G00085080 Rroxscaffold_3G00249430 Rroxscaffold_6G00426200 Rroxscaffold_6G00426480 Rroxscaffold_6G00426530
rosa_rugosa	Rorug02G0521300 Rorug02G0607900 Rorug02G0611500 Rorug02G0611600 Rorug07G0113200
rosa_samantha	Rh2AG587300 Rh2BG599200 Rh2CG569600 Rh2DG608900 Rh3AG010500 Rh3AG010600 Rh3BG010200 Rh3BG010300 Rh3CG009900 Rh3CG010000 Rh3DG010600 Rh3DG010700 Rh5CG124900 Rh7AG247100 Rh7BG242100 Rh7CG262700 Rh7DG253400
rosa_wichuraiana	Rw0G020040 Rw2G048960 Rw3G000580 Rw3G000830 Rw7G020900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	779, 2067
Acc16I	TGCGCA	1 cut(s)	2091
Acc36I	ACCTGC	1 cut(s)	1095
Acc65I	GGTACC	1 cut(s)	1038
AccB1I	GGYRCC	1 cut(s)	1038
AccB7I	CCANNNNNTGG	3 cut(s)	103, 1735, 2553
AccII	CGCG	1 cut(s)	125
AciI	CCGC	5 cut(s)	123, 379, 1121, 1591, 1657
AclWI	GGATC	4 cut(s)	446, 1248, 2402, 2622
AcoI	YGGCCR	2 cut(s)	380, 1765
AcsI	RAATTY	3 cut(s)	503, 923, 2678
AcuI	CTGAAG	5 cut(s)	334, 741, 986, 2057, 2292
AcyI	GRCGYC	1 cut(s)	559
AdeI	CACNNNGTG	2 cut(s)	551, 2135
AfaI	GTAC	6 cut(s)	8, 567, 876, 1040, 1360, 2105
AflIII	ACRYGT	2 cut(s)	850, 2807
AjiI	CACGTC	2 cut(s)	2022, 2416
AjnI	CCWGG	7 cut(s)	228, 1429, 2139, 2335, 2436, 2683, 2882
AjuI	GAANNNNNNNTTGG	4 cut(s)	660, 692, 716, 748
AloI	GAACNNNNNNTCC	2 cut(s)	1540, 1572
Alw26I	GTCTC	1 cut(s)	1599
AlwI	GGATC	4 cut(s)	446, 1248, 2402, 2622
AlwNI	CAGNNNCTG	2 cut(s)	3011, 3131
AoxI	GGCC	5 cut(s)	380, 735, 1251, 1411, 1765
ApeKI	GCWGC	4 cut(s)	170, 478, 845, 856
ApoI	RAATTY	3 cut(s)	503, 923, 2678
AseI	ATTAAT	1 cut(s)	468
Asp700I	GAANNNNTTC	3 cut(s)	420, 1776, 2748
Asp718I	GGTACC	1 cut(s)	1038
AspLEI	GCGC	2 cut(s)	901, 2092
AspS9I	GGNCC	6 cut(s)	736, 1084, 1344, 2482, 2886, 2980
AsuC2I	CCSGG	2 cut(s)	739, 1769
AsuHPI	GGTGA	2 cut(s)	724, 2362
AsuII	TTCGAA	1 cut(s)	2356
AvaII	GGWCC	5 cut(s)	1084, 1344, 2482, 2886, 2980
BanI	GGYRCC	1 cut(s)	1038
BanII	GRGCYC	2 cut(s)	607, 2008
BarI	GAAGNNNNNNTAC	2 cut(s)	1446, 1478
BbsI	GAAGAC	4 cut(s)	1171, 2276, 3026, 3123
BbvI	GCAGC	4 cut(s)	157, 465, 857, 868
BceAI	ACGGC	1 cut(s)	1322
BcgI	CGANNNNNNTGC	2 cut(s)	2165, 2199
BciT130I	CCWGG	7 cut(s)	230, 1431, 2141, 2337, 2438, 2685, 2884
BciVI	GTATCC	4 cut(s)	101, 1071, 1455, 2889
BclI	TGATCA	1 cut(s)	198
BcnI	CCSGG	2 cut(s)	739, 1769
BcoDI	GTCTC	1 cut(s)	1599
BfaI	CTAG	5 cut(s)	1545, 2297, 2573, 2874, 2909
BfmI	CTRYAG	4 cut(s)	894, 2035, 2633, 3003
BfoI	RGCGCY	1 cut(s)	902
BfuAI	ACCTGC	1 cut(s)	1095
BfuI	GTATCC	4 cut(s)	101, 1071, 1455, 2889
BisI	GCNGC	6 cut(s)	171, 380, 479, 846, 857, 1658
BlsI	GCNGC	6 cut(s)	172, 381, 480, 847, 858, 1659
BmcAI	AGTACT	1 cut(s)	1360
Bme1390I	CCNGG	9 cut(s)	230, 739, 1431, 1769, 2141, 2337, 2438, 2685, 2884
Bme18I	GGWCC	5 cut(s)	1084, 1344, 2482, 2886, 2980
BmgBI	CACGTC	2 cut(s)	2022, 2416
BmgT120I	GGNCC	6 cut(s)	736, 1084, 1344, 2482, 2886, 2980
BmiI	GGNNCC	5 cut(s)	1040, 1345, 1994, 2471, 3000
BmrFI	CCNGG	9 cut(s)	230, 739, 1431, 1769, 2141, 2337, 2438, 2685, 2884
BmrI	ACTGGG	1 cut(s)	450
BmsI	GCATC	6 cut(s)	774, 1687, 2265, 2464, 2616, 3112
BmuI	ACTGGG	1 cut(s)	450
BoxI	GACNNNNGTC	3 cut(s)	39, 243, 1175
BpiI	GAAGAC	4 cut(s)	1171, 2276, 3026, 3123
BpmI	CTGGAG	2 cut(s)	2358, 2420
Bpu14I	TTCGAA	1 cut(s)	2356
BpuEI	CTTGAG	2 cut(s)	1339, 2309
BpuMI	CCSGG	2 cut(s)	739, 1769
BsaBI	GATNNNNATC	1 cut(s)	987
BsaHI	GRCGYC	1 cut(s)	559
BsaI	GGTCTC	1 cut(s)	1599
BsaJI	CCNNGG	5 cut(s)	688, 1299, 1374, 1430, 2882
BsaWI	WCCGGW	1 cut(s)	430
Bse1I	ACTGG	4 cut(s)	104, 456, 1322, 2484
Bse3DI	GCAATG	5 cut(s)	249, 1639, 1916, 2532, 2583
Bse8I	GATNNNNATC	1 cut(s)	987
BseBI	CCWGG	7 cut(s)	230, 1431, 2141, 2337, 2438, 2685, 2884
BseDI	CCNNGG	5 cut(s)	688, 1299, 1374, 1430, 2882
BseJI	GATNNNNATC	1 cut(s)	987
BseMI	GCAATG	5 cut(s)	249, 1639, 1916, 2532, 2583
BseMII	CTCAG	5 cut(s)	869, 1187, 2091, 2123, 3123
BseNI	ACTGG	4 cut(s)	104, 456, 1322, 2484
BseRI	GAGGAG	2 cut(s)	776, 1869
BseX3I	CGGCCG	1 cut(s)	380
BseXI	GCAGC	4 cut(s)	157, 465, 857, 868
BseYI	CCCAGC	5 cut(s)	554, 766, 2465, 2818, 2840
BsgI	GTGCAG	2 cut(s)	875, 2386
Bsh1236I	CGCG	1 cut(s)	125
Bsh1285I	CGRYCG	1 cut(s)	383
BshFI	GGCC	5 cut(s)	382, 737, 1253, 1413, 1767
BshNI	GGYRCC	1 cut(s)	1038
BsiEI	CGRYCG	1 cut(s)	383
BsiSI	CCGG	4 cut(s)	383, 431, 739, 1768
BslFI	GGGAC	4 cut(s)	292, 1357, 1698, 2933
BsmAI	GTCTC	1 cut(s)	1599
BsmFI	GGGAC	4 cut(s)	292, 1357, 1698, 2933
BsmI	GAATGC	2 cut(s)	79, 947
BsnI	GGCC	5 cut(s)	382, 737, 1253, 1413, 1767
Bso31I	GGTCTC	1 cut(s)	1599
Bsp119I	TTCGAA	1 cut(s)	2356
Bsp1286I	GDGCHC	2 cut(s)	607, 2008
Bsp143I	GATC	8 cut(s)	198, 451, 582, 988, 1240, 1801, 2407, 2614
Bsp19I	CCATGG	1 cut(s)	688
BspACI	CCGC	5 cut(s)	123, 379, 1121, 1591, 1657
BspANI	GGCC	5 cut(s)	382, 737, 1253, 1413, 1767
BspCNI	CTCAG	5 cut(s)	870, 1186, 2092, 2124, 3124
BspFNI	CGCG	1 cut(s)	125
BspHI	TCATGA	3 cut(s)	949, 1450, 1711
BspLI	GGNNCC	5 cut(s)	1040, 1345, 1994, 2471, 3000
BspMAI	CTGCAG	1 cut(s)	3007
BspMI	ACCTGC	1 cut(s)	1095
BspPI	GGATC	4 cut(s)	446, 1248, 2402, 2622
BspQI	GCTCTTC	1 cut(s)	2436
BspT104I	TTCGAA	1 cut(s)	2356
BspT107I	GGYRCC	1 cut(s)	1038
BspTNI	GGTCTC	1 cut(s)	1599
BsrDI	GCAATG	5 cut(s)	249, 1639, 1916, 2532, 2583
BsrI	ACTGG	4 cut(s)	104, 456, 1322, 2484
BssECI	CCNNGG	5 cut(s)	688, 1299, 1374, 1430, 2882
BssMI	GATC	8 cut(s)	198, 451, 582, 988, 1240, 1801, 2407, 2614
BssNI	GRCGYC	1 cut(s)	559
BssT1I	CCWWGG	3 cut(s)	688, 1299, 1374
Bst2UI	CCWGG	7 cut(s)	230, 1431, 2141, 2337, 2438, 2685, 2884
Bst4CI	ACNGT	9 cut(s)	376, 874, 1009, 1018, 1165, 1186, 1490, 3033, 3085
Bst6I	CTCTTC	6 cut(s)	351, 760, 2340, 2436, 2660, 2889
BstACI	GRCGYC	1 cut(s)	559
BstAPI	GCANNNNNTGC	2 cut(s)	255, 491
BstBI	TTCGAA	1 cut(s)	2356
BstC8I	GCNNGC	5 cut(s)	256, 483, 2088, 2661, 2943
BstDEI	CTNAG	6 cut(s)	878, 1173, 2100, 2132, 2987, 3132
BstDSI	CCRYGG	1 cut(s)	688
BstFNI	CGCG	1 cut(s)	125
BstH2I	RGCGCY	1 cut(s)	902
BstHHI	GCGC	2 cut(s)	901, 2092
BstKTI	GATC	8 cut(s)	201, 454, 585, 991, 1243, 1804, 2410, 2617
BstMAI	GTCTC	1 cut(s)	1599
BstMBI	GATC	8 cut(s)	198, 451, 582, 988, 1240, 1801, 2407, 2614
BstMCI	CGRYCG	1 cut(s)	383
BstMWI	GCNNNNNNNGC	9 cut(s)	255, 307, 491, 611, 620, 772, 970, 2447, 2635
BstNI	CCWGG	7 cut(s)	230, 1431, 2141, 2337, 2438, 2685, 2884
BstNSI	RCATGY	6 cut(s)	139, 854, 1508, 2090, 2120, 2811
BstPAI	GACNNNNGTC	3 cut(s)	39, 243, 1175
BstSCI	CCNGG	9 cut(s)	228, 737, 1429, 1767, 2139, 2335, 2436, 2683, 2882
BstSFI	CTRYAG	4 cut(s)	894, 2035, 2633, 3003
BstUI	CGCG	1 cut(s)	125
BstV1I	GCAGC	4 cut(s)	157, 465, 857, 868
BstV2I	GAAGAC	4 cut(s)	1171, 2276, 3026, 3123
BstX2I	RGATCY	2 cut(s)	451, 2407
BstXI	CCANNNNNNTGG	1 cut(s)	689
BstYI	RGATCY	2 cut(s)	451, 2407
BstZI	CGGCCG	1 cut(s)	380
BsuI	GTATCC	4 cut(s)	101, 1071, 1455, 2889
BsuRI	GGCC	5 cut(s)	382, 737, 1253, 1413, 1767
BtgI	CCRYGG	1 cut(s)	688
BtrI	CACGTC	2 cut(s)	2022, 2416
BtsI	GCAGTG	1 cut(s)	2936
BveI	ACCTGC	1 cut(s)	1095
Cac8I	GCNNGC	5 cut(s)	256, 483, 2088, 2661, 2943
CaiI	CAGNNNCTG	2 cut(s)	3011, 3131
CciI	TCATGA	3 cut(s)	949, 1450, 1711
CfoI	GCGC	2 cut(s)	901, 2092
Cfr13I	GGNCC	6 cut(s)	736, 1084, 1344, 2482, 2886, 2980
CseI	GACGC	2 cut(s)	548, 1658
Csp6I	GTAC	6 cut(s)	7, 566, 875, 1039, 1359, 2104
CviQI	GTAC	6 cut(s)	7, 566, 875, 1039, 1359, 2104
DdeI	CTNAG	6 cut(s)	878, 1173, 2100, 2132, 2987, 3132
DpnI	GATC	8 cut(s)	200, 453, 584, 990, 1242, 1803, 2409, 2616
DpnII	GATC	8 cut(s)	198, 451, 582, 988, 1240, 1801, 2407, 2614
DraIII	CACNNNGTG	2 cut(s)	551, 2135
EaeI	YGGCCR	2 cut(s)	380, 1765
EagI	CGGCCG	1 cut(s)	380
Eam1104I	CTCTTC	6 cut(s)	351, 760, 2340, 2436, 2660, 2889
EarI	CTCTTC	6 cut(s)	351, 760, 2340, 2436, 2660, 2889
EclXI	CGGCCG	1 cut(s)	380
Eco130I	CCWWGG	3 cut(s)	688, 1299, 1374
Eco147I	AGGCCT	1 cut(s)	1253
Eco24I	GRGCYC	2 cut(s)	607, 2008
Eco31I	GGTCTC	1 cut(s)	1599
Eco32I	GATATC	1 cut(s)	706
Eco47I	GGWCC	5 cut(s)	1084, 1344, 2482, 2886, 2980
Eco52I	CGGCCG	1 cut(s)	380
Eco57I	CTGAAG	5 cut(s)	334, 741, 986, 2057, 2292
EcoRII	CCWGG	7 cut(s)	228, 1429, 2139, 2335, 2436, 2683, 2882
EcoRV	GATATC	1 cut(s)	706
EcoT14I	CCWWGG	3 cut(s)	688, 1299, 1374
EcoT38I	GRGCYC	2 cut(s)	607, 2008
ErhI	CCWWGG	3 cut(s)	688, 1299, 1374
FalI	AAGNNNNNCTT	2 cut(s)	1889, 1921
FaqI	GGGAC	4 cut(s)	292, 1357, 1698, 2933
FauI	CCCGC	1 cut(s)	130
FauNDI	CATATG	1 cut(s)	2425
FbaI	TGATCA	1 cut(s)	198
Fnu4HI	GCNGC	6 cut(s)	171, 380, 479, 846, 857, 1658
FriOI	GRGCYC	2 cut(s)	607, 2008
Fsp4HI	GCNGC	6 cut(s)	171, 380, 479, 846, 857, 1658
FspAI	RTGCGCAY	1 cut(s)	2091
FspBI	CTAG	5 cut(s)	1545, 2297, 2573, 2874, 2909
FspI	TGCGCA	1 cut(s)	2091
GlaI	GCGC	2 cut(s)	900, 2091
GluI	GCNGC	6 cut(s)	171, 380, 479, 846, 857, 1658
GsaI	CCCAGC	5 cut(s)	558, 770, 2469, 2822, 2844
GsuI	CTGGAG	2 cut(s)	2358, 2420
HaeII	RGCGCY	1 cut(s)	902
HaeIII	GGCC	5 cut(s)	382, 737, 1253, 1413, 1767
HapII	CCGG	4 cut(s)	383, 431, 739, 1768
HgaI	GACGC	2 cut(s)	548, 1658
HhaI	GCGC	2 cut(s)	901, 2092
Hin1I	GRCGYC	1 cut(s)	559
Hin6I	GCGC	2 cut(s)	899, 2090
HinP1I	GCGC	2 cut(s)	899, 2090
HincII	GTYRAC	1 cut(s)	2719
HindII	GTYRAC	1 cut(s)	2719
HinfI	GANTC	7 cut(s)	145, 1117, 1171, 2293, 2353, 2621, 3047
HpaII	CCGG	4 cut(s)	383, 431, 739, 1768
HphI	GGTGA	2 cut(s)	724, 2362
Hpy166II	GTNNAC	3 cut(s)	2025, 2719, 2744
Hpy8I	GTNNAC	3 cut(s)	2025, 2719, 2744
Hpy99I	CGWCG	1 cut(s)	2180
HpyAV	CCTTC	9 cut(s)	358, 503, 1243, 1283, 1994, 2352, 2395, 2965, 2971
HpyCH4III	ACNGT	9 cut(s)	376, 874, 1009, 1018, 1165, 1186, 1490, 3033, 3085
HpyCH4IV	ACGT	3 cut(s)	2021, 2178, 2415
HpyF10VI	GCNNNNNNNGC	9 cut(s)	255, 307, 491, 611, 620, 772, 970, 2447, 2635
HpyF3I	CTNAG	6 cut(s)	878, 1173, 2100, 2132, 2987, 3132
HpySE526I	ACGT	3 cut(s)	2021, 2178, 2415
Hsp92I	GRCGYC	1 cut(s)	559
HspAI	GCGC	2 cut(s)	899, 2090
KpnI	GGTACC	1 cut(s)	1042
Ksp22I	TGATCA	1 cut(s)	198
Kzo9I	GATC	8 cut(s)	198, 451, 582, 988, 1240, 1801, 2407, 2614
LguI	GCTCTTC	1 cut(s)	2436
LmnI	GCTCC	5 cut(s)	763, 772, 1882, 2656, 3004
Lsp1109I	GCAGC	4 cut(s)	157, 465, 857, 868
LweI	GCATC	6 cut(s)	774, 1687, 2265, 2464, 2616, 3112
MaeI	CTAG	5 cut(s)	1545, 2297, 2573, 2874, 2909
MaeII	ACGT	3 cut(s)	2021, 2178, 2415
MaeIII	GTNAC	8 cut(s)	232, 370, 1102, 2080, 2135, 2596, 2618, 2851
MalI	GATC	8 cut(s)	200, 453, 584, 990, 1242, 1803, 2409, 2616
MboI	GATC	8 cut(s)	198, 451, 582, 988, 1240, 1801, 2407, 2614
MfeI	CAATTG	5 cut(s)	68, 338, 1494, 1794, 2235
MflI	RGATCY	2 cut(s)	451, 2407
MhlI	GDGCHC	2 cut(s)	607, 2008
MlyI	GAGTC	2 cut(s)	1165, 2615
MmeI	TCCRAC	2 cut(s)	699, 1363
MroXI	GAANNNNTTC	3 cut(s)	420, 1776, 2748
MseI	TTAA	9 cut(s)	468, 836, 1112, 1158, 2189, 2258, 2367, 2949, 3093
MslI	CAYNNNNRTG	2 cut(s)	2801, 3134
MspA1I	CMGCKG	1 cut(s)	499
MspI	CCGG	4 cut(s)	383, 431, 739, 1768
MspR9I	CCNGG	9 cut(s)	230, 739, 1431, 1769, 2141, 2337, 2438, 2685, 2884
MunI	CAATTG	5 cut(s)	68, 338, 1494, 1794, 2235
Mva1269I	GAATGC	2 cut(s)	79, 947
MvaI	CCWGG	7 cut(s)	230, 1431, 2141, 2337, 2438, 2685, 2884
MvnI	CGCG	1 cut(s)	125
MwoI	GCNNNNNNNGC	9 cut(s)	255, 307, 491, 611, 620, 772, 970, 2447, 2635
NciI	CCSGG	2 cut(s)	739, 1769
NcoI	CCATGG	1 cut(s)	688
NdeI	CATATG	1 cut(s)	2425
NdeII	GATC	8 cut(s)	198, 451, 582, 988, 1240, 1801, 2407, 2614
NlaIV	GGNNCC	5 cut(s)	1040, 1345, 1994, 2471, 3000
NmuCI	GTSAC	7 cut(s)	232, 370, 1102, 2135, 2596, 2618, 2851
NsbI	TGCGCA	1 cut(s)	2091
NspI	RCATGY	6 cut(s)	139, 854, 1508, 2090, 2120, 2811
NspV	TTCGAA	1 cut(s)	2356
PaeI	GCATGC	1 cut(s)	2090
PagI	TCATGA	3 cut(s)	949, 1450, 1711
PceI	AGGCCT	1 cut(s)	1253
PciI	ACATGT	2 cut(s)	850, 2807
PciSI	GCTCTTC	1 cut(s)	2436
PcsI	WCGNNNNNNNCGW	2 cut(s)	2172, 2394
PctI	GAATGC	2 cut(s)	79, 947
PdmI	GAANNNNTTC	3 cut(s)	420, 1776, 2748
PfeI	GAWTC	5 cut(s)	145, 1117, 2293, 2353, 3047
PflMI	CCANNNNNTGG	3 cut(s)	103, 1735, 2553
PfoI	TCCNGGA	1 cut(s)	2683
PkrI	GCNGC	6 cut(s)	172, 381, 480, 847, 858, 1659
PleI	GAGTC	2 cut(s)	1165, 2615
PpsI	GAGTC	2 cut(s)	1165, 2615
PscI	ACATGT	2 cut(s)	850, 2807
PshAI	GACNNNNGTC	3 cut(s)	39, 243, 1175
PshBI	ATTAAT	1 cut(s)	468
PsiI	TTATAA	2 cut(s)	779, 2067
Psp6I	CCWGG	7 cut(s)	228, 1429, 2139, 2335, 2436, 2683, 2882
PspFI	CCCAGC	5 cut(s)	554, 766, 2465, 2818, 2840
PspGI	CCWGG	7 cut(s)	228, 1429, 2139, 2335, 2436, 2683, 2882
PspN4I	GGNNCC	5 cut(s)	1040, 1345, 1994, 2471, 3000
PspPI	GGNCC	6 cut(s)	736, 1084, 1344, 2482, 2886, 2980
PstI	CTGCAG	1 cut(s)	3007
PstNI	CAGNNNCTG	2 cut(s)	3011, 3131
PsuI	RGATCY	2 cut(s)	451, 2407
PvuII	CAGCTG	1 cut(s)	499
RsaI	GTAC	6 cut(s)	8, 567, 876, 1040, 1360, 2105
RsaNI	GTAC	6 cut(s)	7, 566, 875, 1039, 1359, 2104
RseI	CAYNNNNRTG	2 cut(s)	2801, 3134
SapI	GCTCTTC	1 cut(s)	2436
SaqAI	TTAA	9 cut(s)	468, 836, 1112, 1158, 2189, 2258, 2367, 2949, 3093
SatI	GCNGC	6 cut(s)	171, 380, 479, 846, 857, 1658
Sau3AI	GATC	8 cut(s)	198, 451, 582, 988, 1240, 1801, 2407, 2614
Sau96I	GGNCC	6 cut(s)	736, 1084, 1344, 2482, 2886, 2980
ScaI	AGTACT	1 cut(s)	1360
SchI	GAGTC	2 cut(s)	1165, 2615
ScrFI	CCNGG	9 cut(s)	230, 739, 1431, 1769, 2141, 2337, 2438, 2685, 2884
SduI	GDGCHC	2 cut(s)	607, 2008
SfaNI	GCATC	6 cut(s)	774, 1687, 2265, 2464, 2616, 3112
SfcI	CTRYAG	4 cut(s)	894, 2035, 2633, 3003
SfuI	TTCGAA	1 cut(s)	2356
SinI	GGWCC	5 cut(s)	1084, 1344, 2482, 2886, 2980
SmiMI	CAYNNNNRTG	2 cut(s)	2801, 3134
SmlI	CTYRAG	2 cut(s)	1354, 2288
SmoI	CTYRAG	2 cut(s)	1354, 2288
SphI	GCATGC	1 cut(s)	2090
SseBI	AGGCCT	1 cut(s)	1253
SsiI	CCGC	5 cut(s)	123, 379, 1121, 1591, 1657
SspI	AATATT	3 cut(s)	956, 1757, 3091
SspMI	CTAG	5 cut(s)	1545, 2297, 2573, 2874, 2909
StuI	AGGCCT	1 cut(s)	1253
StyD4I	CCNGG	9 cut(s)	228, 737, 1429, 1767, 2139, 2335, 2436, 2683, 2882
StyI	CCWWGG	3 cut(s)	688, 1299, 1374
TaaI	ACNGT	9 cut(s)	376, 874, 1009, 1018, 1165, 1186, 1490, 3033, 3085
TaiI	ACGT	3 cut(s)	2024, 2181, 2418
TaqI	TCGA	6 cut(s)	287, 868, 2166, 2356, 2388, 2624
TatI	WGTACW	3 cut(s)	565, 874, 1358
TauI	GCSGC	2 cut(s)	382, 1660
TfiI	GAWTC	5 cut(s)	145, 1117, 2293, 2353, 3047
Tru1I	TTAA	9 cut(s)	468, 836, 1112, 1158, 2189, 2258, 2367, 2949, 3093
Tru9I	TTAA	9 cut(s)	468, 836, 1112, 1158, 2189, 2258, 2367, 2949, 3093
TseFI	GTSAC	7 cut(s)	232, 370, 1102, 2135, 2596, 2618, 2851
TseI	GCWGC	4 cut(s)	170, 478, 845, 856
Tsp45I	GTSAC	7 cut(s)	232, 370, 1102, 2135, 2596, 2618, 2851
Van91I	CCANNNNNTGG	3 cut(s)	103, 1735, 2553
VpaK11BI	GGWCC	5 cut(s)	1084, 1344, 2482, 2886, 2980
VspI	ATTAAT	1 cut(s)	468
XapI	RAATTY	3 cut(s)	503, 923, 2678
XceI	RCATGY	6 cut(s)	139, 854, 1508, 2090, 2120, 2811
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2681
XmnI	GAANNNNTTC	3 cut(s)	420, 1776, 2748
XspI	CTAG	5 cut(s)	1545, 2297, 2573, 2874, 2909
ZrmI	AGTACT	1 cut(s)	1360

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.