Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000802

Physical Location & Seq

Genomic Coordinates Forward (+)

455465 .. 457459

Gene Structure 1995 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41549

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGTGTCATGAGCAGTTGTCAACGCATTTGGTGGTTGTGATGGGAACTCAATATTATGATGGCCGGGAAAATCTTCACACTGATTACCCAATTGCTGATCTCTTGCAGATGATTGGTCATGCCTGTCGCCCTAAGAAAGATAATTCTGGGAAATGTGTCATCCTCTGCCATGCTCCTCGTAAAGAATACTACAAGAAGTTCTTATATGAAGCATTGCCTGTTGAAAGTCATTTGCACCATTATTTACATGACAATCTAAATGCAGAAGTTGTAGCCCAAGTAATCGGGAACCATGAAGGGGCTCTCAATTACCTTGCATGGACATTTTTCTACAGGAGGCTCACACAGAATCCCAACTATTATCTTCAGGGAGTTACGCACATAATTCTGAGTACCTTTCAGAGCTTTTATTCTCCAATTGAGCGTTTCAATTCTTCCTTAACTTCCAAAACGAAGATGAAGGGTCTTCTTGAGATTCTAGCTCATGCTTCAGGGTATTCGCAACTTTCCATACGACCTGGAGAGGAAGAGGTGATTCGAAGGTTGATTAACCACCATAGATTTTCCTTTGAGAATCCCAACTTCACAGATCCTCACGTCAAAGCAAATGCTCTTCTTCAGGCCCATTTTGCAAGGCATCATGTGGCTGGGGACCTATCATTGGACCAGCTTGAGGTTCTCCTTTCTGCAAGTAGGTTGCTTCACGCAATATTTGATGTCCTTGCCAGCAATGGATGGCTAAACCTTTCTCTCATAGCAATGGAAGTCAGCCAGATGGTGACTCGGGGGATGTGGGATCATGACTTGATGCTACTACAGCTTCCTCACTTCACGATGGAGCTGGCAAAAAGATGCCAAAAGTTTCCTGGAAAGAATATAGAGAGGGTTGGCCCTCTTCATGCCCCGAGGTATCCCAGGACCAAAGAAGAGGGGTGGTGGCTAGTAGTTGGGGACACCAAGACTAACTCACTGCTTGCCATTAAGAGAGTTCCCCTACTAAAGAAGGCGAAGGTCCAATTTAGATTTTTGGCTCCTGCAGAAGCTGGAAATAAGACACACTGTATTTCATGTGTGATTCATCGGTCGGGGTTAGGGCTAGATCGGTCGTCGAGAGGGCTCGGAGGGCTCCATCGGTGGGCGCCGATCATAACCGTTCTCAGGATGGCCGCGGCCGTTCACTGGGTCGCGATGGTCGTGGTTCTCAGAGCCAAGATGGACGTCGTTATCAAAGCCAAGACAAATCTCTTGAGGGTGTTTCGGTGCACCGTAGTTGACTGTGAAGAGAACGGAGTTAGCTCAGGCCATGAAGCGTGCGAGGGAGAGGAAGCAGATAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000354 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005682 GO:0005911 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009506 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022613 GO:0022618 GO:0030054 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0042623 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0046540 GO:0055044 GO:0065003 GO:0070013 GO:0070035 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0097526 GO:0120114 GO:0140098 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD Helicase_C Sec63

Protein Analysis

445

Amino Acids

50.46

Weight (kDa)

8.89

Isoelectric Point (pI)

45.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_SNRNP200	PF23445	75 - 133	1.6e-21	Winged Helix-turn-helix domain
Sec63	PF02889	129 - 359	6.6e-46	Sec63 Brl domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000802)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20960 AT1G20960 AT2G42270
fragaria_vesca	FvH4_5g21940 FvH4_5g30070 FvH4_6g00860 FvH4_6g00860 FvH4_6g47200
malus_domestica	MD04G1240400.v1.1 MD09G1062900.v1.1 MD09G1063000.v1.1 MD12G1257300.v1.1
prunus_persica	Prupe.6G358100_v2.0.a1 Prupe.6G358100_v2.0.a1
pyrus_communis	pycom04g21210 pycom04g21230 pycom111g05330 pycom12g23600 pycom12g23620
rosa_chinensis	RchiOBHm_Chr2g0166221 RchiOBHm_Chr3g0448041 RchiOBHm_Chr3g0448351 RchiOBHm_Chr5g0014801 RchiOBHm_Chr7g0209461
rosa_laevigata	RLG00000003133 RLG00000021598 RLG00000021599 RLG00000025925 RLG00000025950 RLG00000025953 RLG00000032142
rosa_multiflora	Rmu_co8520521.1_g000001 Rmu_sc0005582.1_g000009 Rmu_sc0005969.1_g000018 Rmu_sc0015167.1_g000007 Rmu_ssc0000323.1_g000031
rosa_roxburghii	Rroxscaffold_1G00061750 Rroxscaffold_2G00085080 Rroxscaffold_3G00249430 Rroxscaffold_6G00426200 Rroxscaffold_6G00426480 Rroxscaffold_6G00426530
rosa_rugosa	Rorug02G0521300 Rorug02G0607900 Rorug02G0611500 Rorug02G0611600 Rorug07G0113200
rosa_samantha	Rh2AG587300 Rh2BG599200 Rh2CG569600 Rh2DG608900 Rh3AG010500 Rh3AG010600 Rh3BG010200 Rh3BG010300 Rh3CG009900 Rh3CG010000 Rh3DG010600 Rh3DG010700 Rh5CG124900 Rh7AG247100 Rh7BG242100 Rh7CG262700 Rh7DG253400
rosa_wichuraiana	Rw0G020040 Rw2G048960 Rw3G000580 Rw3G000830 Rw7G020900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1221
AccB1I	GGYRCC	1 cut(s)	1138
AccII	CGCG	2 cut(s)	1169, 1187
AciI	CCGC	2 cut(s)	1167, 1169
AclWI	GGATC	2 cut(s)	584, 804
AcoI	YGGCCR	3 cut(s)	61, 1164, 1170
AcuI	CTGAAG	3 cut(s)	350, 474, 602
AcyI	GRCGYC	2 cut(s)	1139, 1218
AfaI	GTAC	1 cut(s)	394
AfiI	CCNNNNNNNGG	6 cut(s)	298, 661, 673, 1135, 1158, 1179
AgsI	TTSAA	2 cut(s)	224, 430
AjiI	CACGTC	1 cut(s)	598
AjnI	CCWGG	3 cut(s)	517, 865, 914
AluBI	AGCT	7 cut(s)	405, 482, 670, 820, 841, 1043, 1296
AluI	AGCT	7 cut(s)	405, 482, 670, 820, 841, 1043, 1296
Alw21I	GWGCWC	1 cut(s)	1265
Alw44I	GTGCAC	1 cut(s)	1261
AlwI	GGATC	2 cut(s)	584, 804
AlwNI	CAGNNNCTG	1 cut(s)	1043
Ama87I	CYCGRG	2 cut(s)	783, 904
AoxI	GGCC	6 cut(s)	61, 621, 889, 1164, 1170, 1300
ApaLI	GTGCAC	1 cut(s)	1261
Asp700I	GAANNNNTTC	1 cut(s)	72
AspLEI	GCGC	1 cut(s)	1141
AspS9I	GGNCC	6 cut(s)	622, 652, 664, 890, 918, 1012
AsuC2I	CCSGG	1 cut(s)	65
AsuHPI	GGTGA	2 cut(s)	544, 790
AsuII	TTCGAA	1 cut(s)	538
AvaI	CYCGRG	2 cut(s)	783, 904
AvaII	GGWCC	4 cut(s)	652, 664, 918, 1012
BaeGI	GKGCMC	1 cut(s)	1265
BanI	GGYRCC	1 cut(s)	1138
BanII	GRGCYC	3 cut(s)	304, 1119, 1128
BbsI	GAAGAC	1 cut(s)	458
Bbv12I	GWGCWC	1 cut(s)	1265
BccI	CCATC	9 cut(s)	34, 53, 729, 769, 829, 1137, 1156, 1183, 1207
BceAI	ACGGC	1 cut(s)	1157
BciT130I	CCWGG	3 cut(s)	519, 867, 916
BciVI	GTATCC	1 cut(s)	921
BcnI	CCSGG	1 cut(s)	65
BfaI	CTAG	3 cut(s)	479, 941, 1097
BfmI	CTRYAG	3 cut(s)	331, 815, 1035
BfoI	RGCGCY	1 cut(s)	1142
BfuI	GTATCC	1 cut(s)	921
BisI	GCNGC	2 cut(s)	1167, 1170
BlsI	GCNGC	2 cut(s)	1168, 1171
Bme1390I	CCNGG	4 cut(s)	65, 519, 867, 916
Bme18I	GGWCC	4 cut(s)	652, 664, 918, 1012
BmeT110I	CYCGRG	2 cut(s)	783, 904
BmgBI	CACGTC	1 cut(s)	598
BmgT120I	GGNCC	6 cut(s)	622, 652, 664, 890, 918, 1012
BmiI	GGNNCC	5 cut(s)	290, 653, 1032, 1127, 1140
BmrFI	CCNGG	4 cut(s)	65, 519, 867, 916
BmrI	ACTGGG	1 cut(s)	1189
BmsI	GCATC	3 cut(s)	646, 798, 842
BmuI	ACTGGG	1 cut(s)	1189
BpiI	GAAGAC	1 cut(s)	458
BpmI	CTGGAG	1 cut(s)	540
Bpu10I	CCTNAGC	1 cut(s)	1297
Bpu14I	TTCGAA	1 cut(s)	538
BpuEI	CTTGAG	3 cut(s)	491, 692, 1267
BpuMI	CCSGG	1 cut(s)	65
BsaHI	GRCGYC	2 cut(s)	1139, 1218
BsaJI	CCNNGG	3 cut(s)	905, 914, 1167
Bsc4I	CCNNNNNNNGG	6 cut(s)	298, 661, 673, 1135, 1158, 1179
Bse1I	ACTGG	1 cut(s)	1184
Bse3DI	GCAATG	3 cut(s)	212, 736, 765
BseBI	CCWGG	3 cut(s)	519, 867, 916
BseDI	CCNNGG	3 cut(s)	905, 914, 1167
BseGI	GGATG	4 cut(s)	159, 740, 795, 1167
BseLI	CCNNNNNNNGG	6 cut(s)	298, 661, 673, 1135, 1158, 1179
BseMI	GCAATG	3 cut(s)	212, 736, 765
BseMII	CTCAG	4 cut(s)	380, 1171, 1216, 1311
BseNI	ACTGG	1 cut(s)	1184
BseRI	GAGGAG	1 cut(s)	165
BseSI	GKGCMC	1 cut(s)	1265
BseX3I	CGGCCG	1 cut(s)	1170
BseYI	CCCAGC	1 cut(s)	647
Bsh1236I	CGCG	2 cut(s)	1169, 1187
Bsh1285I	CGRYCG	3 cut(s)	1085, 1106, 1173
BshFI	GGCC	6 cut(s)	63, 623, 891, 1166, 1172, 1302
BshNI	GGYRCC	1 cut(s)	1138
BsiEI	CGRYCG	3 cut(s)	1085, 1106, 1173
BsiHKAI	GWGCWC	1 cut(s)	1265
BsiHKCI	CYCGRG	2 cut(s)	783, 904
BsiSI	CCGG	1 cut(s)	64
BslFI	GGGAC	2 cut(s)	665, 965
BslI	CCNNNNNNNGG	6 cut(s)	298, 661, 673, 1135, 1158, 1179
BsmFI	GGGAC	2 cut(s)	665, 965
BsnI	GGCC	6 cut(s)	63, 623, 891, 1166, 1172, 1302
BsoBI	CYCGRG	2 cut(s)	783, 904
Bsp119I	TTCGAA	1 cut(s)	538
Bsp1286I	GDGCHC	4 cut(s)	304, 1119, 1128, 1265
Bsp143I	GATC	5 cut(s)	97, 589, 796, 1099, 1143
Bsp68I	TCGCGA	1 cut(s)	1187
BspACI	CCGC	2 cut(s)	1167, 1169
BspANI	GGCC	6 cut(s)	63, 623, 891, 1166, 1172, 1302
BspCNI	CTCAG	4 cut(s)	381, 1170, 1215, 1310
BspFNI	CGCG	2 cut(s)	1169, 1187
BspHI	TCATGA	2 cut(s)	7, 799
BspLI	GGNNCC	5 cut(s)	290, 653, 1032, 1127, 1140
BspMAI	CTGCAG	1 cut(s)	1039
BspPI	GGATC	2 cut(s)	584, 804
BspQI	GCTCTTC	1 cut(s)	618
BspT104I	TTCGAA	1 cut(s)	538
BspT107I	GGYRCC	1 cut(s)	1138
BsrDI	GCAATG	3 cut(s)	212, 736, 765
BsrI	ACTGG	1 cut(s)	1184
BssECI	CCNNGG	3 cut(s)	905, 914, 1167
BssMI	GATC	5 cut(s)	97, 589, 796, 1099, 1143
BssNI	GRCGYC	2 cut(s)	1139, 1218
Bst2UI	CCWGG	3 cut(s)	519, 867, 916
Bst4CI	ACNGT	4 cut(s)	1061, 1153, 1267, 1277
Bst6I	CTCTTC	5 cut(s)	522, 618, 900, 921, 1275
BstACI	GRCGYC	2 cut(s)	1139, 1218
BstBI	TTCGAA	1 cut(s)	538
BstC8I	GCNNGC	4 cut(s)	727, 843, 975, 1312
BstDEI	CTNAG	5 cut(s)	132, 389, 1157, 1202, 1297
BstDSI	CCRYGG	1 cut(s)	1167
BstF5I	GGATG	4 cut(s)	159, 740, 795, 1167
BstFNI	CGCG	2 cut(s)	1169, 1187
BstH2I	RGCGCY	1 cut(s)	1142
BstHHI	GCGC	1 cut(s)	1141
BstKTI	GATC	5 cut(s)	100, 592, 799, 1102, 1146
BstMBI	GATC	5 cut(s)	97, 589, 796, 1099, 1143
BstMCI	CGRYCG	3 cut(s)	1085, 1106, 1173
BstMWI	GCNNNNNNNGC	3 cut(s)	629, 817, 1123
BstNI	CCWGG	3 cut(s)	519, 867, 916
BstSCI	CCNGG	4 cut(s)	63, 517, 865, 914
BstSFI	CTRYAG	3 cut(s)	331, 815, 1035
BstSLI	GKGCMC	1 cut(s)	1265
BstUI	CGCG	2 cut(s)	1169, 1187
BstV2I	GAAGAC	1 cut(s)	458
BstX2I	RGATCY	1 cut(s)	589
BstYI	RGATCY	1 cut(s)	589
BstZI	CGGCCG	1 cut(s)	1170
BsuI	GTATCC	1 cut(s)	921
BsuRI	GGCC	6 cut(s)	63, 623, 891, 1166, 1172, 1302
BtgI	CCRYGG	1 cut(s)	1167
BtgZI	GCGATG	1 cut(s)	1202
BtrI	CACGTC	1 cut(s)	598
BtsCI	GGATG	4 cut(s)	159, 740, 795, 1167
BtsI	GCAGTG	1 cut(s)	968
BtsIMutI	CAGTG	4 cut(s)	78, 968, 1057, 1177
BtuMI	TCGCGA	1 cut(s)	1187
Cac8I	GCNNGC	4 cut(s)	727, 843, 975, 1312
CaiI	CAGNNNCTG	1 cut(s)	1043
CciI	TCATGA	2 cut(s)	7, 799
CfoI	GCGC	1 cut(s)	1141
Cfr13I	GGNCC	6 cut(s)	622, 652, 664, 890, 918, 1012
Cfr42I	CCGCGG	1 cut(s)	1170
Csp6I	GTAC	1 cut(s)	393
CviQI	GTAC	1 cut(s)	393
DdeI	CTNAG	5 cut(s)	132, 389, 1157, 1202, 1297
DinI	GGCGCC	1 cut(s)	1140
DpnI	GATC	5 cut(s)	99, 591, 798, 1101, 1145
DpnII	GATC	5 cut(s)	97, 589, 796, 1099, 1143
EaeI	YGGCCR	3 cut(s)	61, 1164, 1170
EagI	CGGCCG	1 cut(s)	1170
Eam1104I	CTCTTC	5 cut(s)	522, 618, 900, 921, 1275
EarI	CTCTTC	5 cut(s)	522, 618, 900, 921, 1275
EclXI	CGGCCG	1 cut(s)	1170
Eco24I	GRGCYC	3 cut(s)	304, 1119, 1128
Eco47I	GGWCC	4 cut(s)	652, 664, 918, 1012
Eco52I	CGGCCG	1 cut(s)	1170
Eco57I	CTGAAG	3 cut(s)	350, 474, 602
Eco88I	CYCGRG	2 cut(s)	783, 904
EcoO109I	RGGNCCY	1 cut(s)	652
EcoRII	CCWGG	3 cut(s)	517, 865, 914
EcoT38I	GRGCYC	3 cut(s)	304, 1119, 1128
EgeI	GGCGCC	1 cut(s)	1140
EheI	GGCGCC	1 cut(s)	1140
FalI	AAGNNNNNCTT	2 cut(s)	185, 217
FaqI	GGGAC	2 cut(s)	665, 965
Fnu4HI	GCNGC	2 cut(s)	1167, 1170
FokI	GGATG	4 cut(s)	146, 747, 802, 1174
FriOI	GRGCYC	3 cut(s)	304, 1119, 1128
Fsp4HI	GCNGC	2 cut(s)	1167, 1170
FspBI	CTAG	3 cut(s)	479, 941, 1097
GlaI	GCGC	1 cut(s)	1140
GluI	GCNGC	2 cut(s)	1167, 1170
GsaI	CCCAGC	1 cut(s)	651
GsuI	CTGGAG	1 cut(s)	540
HaeII	RGCGCY	1 cut(s)	1142
HaeIII	GGCC	6 cut(s)	63, 623, 891, 1166, 1172, 1302
HapII	CCGG	1 cut(s)	64
HhaI	GCGC	1 cut(s)	1141
Hin1I	GRCGYC	2 cut(s)	1139, 1218
Hin6I	GCGC	1 cut(s)	1139
HinP1I	GCGC	1 cut(s)	1139
HincII	GTYRAC	2 cut(s)	21, 1273
HindII	GTYRAC	2 cut(s)	21, 1273
HinfI	GANTC	6 cut(s)	349, 475, 535, 574, 781, 1075
HpaII	CCGG	1 cut(s)	64
HphI	GGTGA	2 cut(s)	544, 790
Hpy166II	GTNNAC	4 cut(s)	21, 1177, 1263, 1273
Hpy188I	TCNGA	4 cut(s)	390, 402, 1121, 1205
Hpy188III	TCNNGA	9 cut(s)	8, 286, 470, 800, 832, 1110, 1159, 1186, 1246
Hpy8I	GTNNAC	4 cut(s)	21, 1177, 1263, 1273
Hpy99I	CGWCG	2 cut(s)	1111, 1223
HpyAV	CCTTC	5 cut(s)	290, 454, 534, 997, 1003
HpyCH4III	ACNGT	4 cut(s)	1061, 1153, 1267, 1277
HpyCH4IV	ACGT	2 cut(s)	597, 1218
HpyCH4V	TGCA	8 cut(s)	106, 235, 263, 317, 632, 689, 1037, 1263
HpyF10VI	GCNNNNNNNGC	3 cut(s)	629, 817, 1123
HpyF3I	CTNAG	5 cut(s)	132, 389, 1157, 1202, 1297
HpySE526I	ACGT	2 cut(s)	597, 1218
Hsp92I	GRCGYC	2 cut(s)	1139, 1218
HspAI	GCGC	1 cut(s)	1139
KasI	GGCGCC	1 cut(s)	1138
KspI	CCGCGG	1 cut(s)	1170
Kzo9I	GATC	5 cut(s)	97, 589, 796, 1099, 1143
LguI	GCTCTTC	1 cut(s)	618
LmnI	GCTCC	4 cut(s)	178, 838, 1036, 1131
LweI	GCATC	3 cut(s)	646, 798, 842
MaeI	CTAG	3 cut(s)	479, 941, 1097
MaeII	ACGT	2 cut(s)	597, 1218
MaeIII	GTNAC	2 cut(s)	373, 778
MalI	GATC	5 cut(s)	99, 591, 798, 1101, 1145
MboI	GATC	5 cut(s)	97, 589, 796, 1099, 1143
MfeI	CAATTG	2 cut(s)	90, 417
MflI	RGATCY	1 cut(s)	589
MhlI	GDGCHC	4 cut(s)	304, 1119, 1128, 1265
MluCI	AATT	7 cut(s)	90, 142, 307, 384, 417, 430, 1016
Mly113I	GGCGCC	1 cut(s)	1139
MlyI	GAGTC	1 cut(s)	775
MroXI	GAANNNNTTC	1 cut(s)	72
MseI	TTAA	3 cut(s)	440, 549, 981
MslI	CAYNNNNRTG	1 cut(s)	758
MspA1I	CMGCKG	1 cut(s)	1169
MspI	CCGG	1 cut(s)	64
MspR9I	CCNGG	4 cut(s)	65, 519, 867, 916
MunI	CAATTG	2 cut(s)	90, 417
MvaI	CCWGG	3 cut(s)	519, 867, 916
MvnI	CGCG	2 cut(s)	1169, 1187
MwoI	GCNNNNNNNGC	3 cut(s)	629, 817, 1123
NarI	GGCGCC	1 cut(s)	1139
NciI	CCSGG	1 cut(s)	65
NdeII	GATC	5 cut(s)	97, 589, 796, 1099, 1143
NlaIV	GGNNCC	5 cut(s)	290, 653, 1032, 1127, 1140
NmuCI	GTSAC	1 cut(s)	778
NruI	TCGCGA	1 cut(s)	1187
NspV	TTCGAA	1 cut(s)	538
PagI	TCATGA	2 cut(s)	7, 799
PciSI	GCTCTTC	1 cut(s)	618
PcsI	WCGNNNNNNNCGW	1 cut(s)	1191
PdmI	GAANNNNTTC	1 cut(s)	72
PfeI	GAWTC	5 cut(s)	349, 475, 535, 574, 1075
PfoI	TCCNGGA	1 cut(s)	865
PkrI	GCNGC	2 cut(s)	1168, 1171
PleI	GAGTC	1 cut(s)	775
PluTI	GGCGCC	1 cut(s)	1142
PpsI	GAGTC	1 cut(s)	775
PpuMI	RGGWCCY	1 cut(s)	652
Psp5II	RGGWCCY	1 cut(s)	652
Psp6I	CCWGG	3 cut(s)	517, 865, 914
PspFI	CCCAGC	1 cut(s)	647
PspGI	CCWGG	3 cut(s)	517, 865, 914
PspN4I	GGNNCC	5 cut(s)	290, 653, 1032, 1127, 1140
PspPI	GGNCC	6 cut(s)	622, 652, 664, 890, 918, 1012
PspPPI	RGGWCCY	1 cut(s)	652
PstI	CTGCAG	1 cut(s)	1039
PstNI	CAGNNNCTG	1 cut(s)	1043
PsuI	RGATCY	1 cut(s)	589
RruI	TCGCGA	1 cut(s)	1187
RsaI	GTAC	1 cut(s)	394
RsaNI	GTAC	1 cut(s)	393
RseI	CAYNNNNRTG	1 cut(s)	758
SacII	CCGCGG	1 cut(s)	1170
SapI	GCTCTTC	1 cut(s)	618
SaqAI	TTAA	3 cut(s)	440, 549, 981
SatI	GCNGC	2 cut(s)	1167, 1170
Sau3AI	GATC	5 cut(s)	97, 589, 796, 1099, 1143
Sau96I	GGNCC	6 cut(s)	622, 652, 664, 890, 918, 1012
SchI	GAGTC	1 cut(s)	775
ScrFI	CCNGG	4 cut(s)	65, 519, 867, 916
SduI	GDGCHC	4 cut(s)	304, 1119, 1128, 1265
SfaNI	GCATC	3 cut(s)	646, 798, 842
SfcI	CTRYAG	3 cut(s)	331, 815, 1035
SfoI	GGCGCC	1 cut(s)	1140
Sfr303I	CCGCGG	1 cut(s)	1170
SfuI	TTCGAA	1 cut(s)	538
SgrBI	CCGCGG	1 cut(s)	1170
SinI	GGWCC	4 cut(s)	652, 664, 918, 1012
SmiMI	CAYNNNNRTG	1 cut(s)	758
SmlI	CTYRAG	3 cut(s)	470, 671, 1246
SmoI	CTYRAG	3 cut(s)	470, 671, 1246
Sse9I	AATT	7 cut(s)	90, 142, 307, 384, 417, 430, 1016
SsiI	CCGC	2 cut(s)	1167, 1169
SspDI	GGCGCC	1 cut(s)	1138
SspI	AATATT	2 cut(s)	53, 711
SspMI	CTAG	3 cut(s)	479, 941, 1097
StyD4I	CCNGG	4 cut(s)	63, 517, 865, 914
TaaI	ACNGT	4 cut(s)	1061, 1153, 1267, 1277
TaiI	ACGT	2 cut(s)	600, 1221
TaqI	TCGA	2 cut(s)	538, 1109
TaqII	GACCGA	2 cut(s)	1071, 1092
TasI	AATT	7 cut(s)	90, 142, 307, 384, 417, 430, 1016
TauI	GCSGC	2 cut(s)	1169, 1172
TfiI	GAWTC	5 cut(s)	349, 475, 535, 574, 1075
Tru1I	TTAA	3 cut(s)	440, 549, 981
Tru9I	TTAA	3 cut(s)	440, 549, 981
TscAI	CASTG	4 cut(s)	85, 975, 1064, 1184
TseFI	GTSAC	1 cut(s)	778
Tsp45I	GTSAC	1 cut(s)	778
TspDTI	ATGAA	7 cut(s)	222, 309, 473, 887, 1056, 1067, 1320
TspGWI	ACGGA	1 cut(s)	1302
TspRI	CASTG	4 cut(s)	85, 975, 1064, 1184
VneI	GTGCAC	1 cut(s)	1261
VpaK11BI	GGWCC	4 cut(s)	652, 664, 918, 1012
XcmI	CCANNNNNNNNNTGG	1 cut(s)	863
XmnI	GAANNNNTTC	1 cut(s)	72
XspI	CTAG	3 cut(s)	479, 941, 1097
ZraI	GACGTC	1 cut(s)	1219

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.