U5 small nuclear ribonucleoprotein 200 kDa
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| BRR2_plug | PF21188 | 109 - 171 | 6e-07 | Pre-mRNA-splicing helicase BRR2 plug domain |
| Helicase_PWI | PF18149 | 235 - 344 | 1.9e-29 | N-terminal helicase PWI domain |
| ResIII | PF04851 | 465 - 640 | 1.5e-11 | Type III restriction enzyme, res subunit |
| DEAD | PF00270 | 466 - 644 | 4.9e-32 | DEAD/DEAH box helicase |
| Helicase_C | PF00271 | 744 - 842 | 2.8e-10 | Helicase conserved C-terminal domain |
| WHD_SNRNP200 | PF23445 | 873 - 949 | 2.9e-22 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 965 - 1268 | 2.9e-95 | Sec63 Brl domain |
| ResIII | PF04851 | 1311 - 1456 | 6.5e-09 | Type III restriction enzyme, res subunit |
| DEAD | PF00270 | 1313 - 1487 | 6.4e-26 | DEAD/DEAH box helicase |
| WHD_SNRNP200 | PF23445 | 1705 - 1786 | 2.3e-34 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 1792 - 2111 | 6e-57 | Sec63 Brl domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 6197, 6242, 6282 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1640, 6188 |
| Acc65I | GGTACC | 1 cut(s) | 6126 |
| AccB1I | GGYRCC | 6 cut(s) | 201, 249, 1219, 3216, 3718, 6126 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 4936, 5742 |
| AccBSI | CCGCTC | 1 cut(s) | 20 |
| AccI | GTMKAC | 3 cut(s) | 817, 4405, 5417 |
| AccII | CGCG | 6 cut(s) | 32, 34, 144, 210, 3078, 5063 |
| AclWI | GGATC | 7 cut(s) | 1173, 2352, 2447, 2812, 4845, 5373, 5536 |
| AcoI | YGGCCR | 2 cut(s) | 2563, 5964 |
| AcvI | CACGTG | 3 cut(s) | 104, 115, 355 |
| AcyI | GRCGYC | 4 cut(s) | 83, 250, 297, 3217 |
| AdeI | CACNNNGTG | 1 cut(s) | 2425 |
| AflIII | ACRYGT | 1 cut(s) | 2721 |
| AhlI | ACTAGT | 2 cut(s) | 1046, 4306 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2652, 2684, 3318, 3350 |
| AleI | CACNNNNGTG | 1 cut(s) | 784 |
| Alw21I | GWGCWC | 6 cut(s) | 276, 1459, 1494, 3232, 3558, 4067 |
| AlwI | GGATC | 7 cut(s) | 1173, 2352, 2447, 2812, 4845, 5373, 5536 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 5785, 6263 |
| Ama87I | CYCGRG | 4 cut(s) | 214, 327, 4223, 6071 |
| AoxI | GGCC | 8 cut(s) | 191, 308, 1825, 2563, 5628, 5964, 6039, 6106 |
| AseI | ATTAAT | 1 cut(s) | 3126 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 2232, 2664, 3444, 3735, 5988 |
| Asp718I | GGTACC | 1 cut(s) | 6126 |
| AspLEI | GCGC | 6 cut(s) | 34, 252, 404, 1579, 3219, 5065 |
| AsuC2I | CCSGG | 5 cut(s) | 224, 328, 329, 1829, 6043 |
| AsuNHI | GCTAGC | 1 cut(s) | 796 |
| AvaI | CYCGRG | 4 cut(s) | 214, 327, 4223, 6071 |
| AvaII | GGWCC | 9 cut(s) | 73, 1001, 2439, 3073, 3484, 3783, 3814, 4462, 5671 |
| BaeGI | GKGCMC | 1 cut(s) | 120 |
| BalI | TGGCCA | 2 cut(s) | 2565, 5966 |
| BanI | GGYRCC | 6 cut(s) | 201, 249, 1219, 3216, 3718, 6126 |
| BanII | GRGCYC | 3 cut(s) | 1363, 3232, 3558 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 5078, 5110 |
| BbrPI | CACGTG | 3 cut(s) | 104, 115, 355 |
| BbsI | GAAGAC | 8 cut(s) | 297, 320, 2217, 2527, 3949, 4025, 5465, 6150 |
| Bbv12I | GWGCWC | 6 cut(s) | 276, 1459, 1494, 3232, 3558, 4067 |
| BceAI | ACGGC | 7 cut(s) | 237, 263, 310, 415, 4903, 6093, 6288 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1172, 1206, 3098, 3132 |
| BciVI | GTATCC | 1 cut(s) | 2873 |
| BclI | TGATCA | 5 cut(s) | 499, 2644, 2856, 3916, 5287 |
| BcnI | CCSGG | 5 cut(s) | 224, 328, 329, 1829, 6043 |
| BcuI | ACTAGT | 2 cut(s) | 1046, 4306 |
| BfmI | CTRYAG | 6 cut(s) | 2091, 5080, 5313, 5477, 5822, 6255 |
| BfoI | RGCGCY | 3 cut(s) | 253, 405, 3220 |
| BfuI | GTATCC | 1 cut(s) | 2873 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 199 |
| BglII | AGATCT | 1 cut(s) | 3922 |
| Bme18I | GGWCC | 9 cut(s) | 73, 1001, 2439, 3073, 3484, 3783, 3814, 4462, 5671 |
| BmeT110I | CYCGRG | 4 cut(s) | 214, 327, 4223, 6071 |
| BmrI | ACTGGG | 5 cut(s) | 742, 1473, 4203, 4948, 6094 |
| BmtI | GCTAGC | 1 cut(s) | 800 |
| BmuI | ACTGGG | 5 cut(s) | 742, 1473, 4203, 4948, 6094 |
| BoxI | GACNNNNGTC | 4 cut(s) | 216, 2901, 3953, 4376 |
| BpiI | GAAGAC | 8 cut(s) | 297, 320, 2217, 2527, 3949, 4025, 5465, 6150 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 4152, 4184 |
| BpmI | CTGGAG | 4 cut(s) | 4236, 4491, 5243, 6041 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3779 |
| BpuEI | CTTGAG | 4 cut(s) | 2113, 3936, 5281, 5475 |
| BpuMI | CCSGG | 5 cut(s) | 224, 328, 329, 1829, 6043 |
| Bsa29I | ATCGAT | 1 cut(s) | 4870 |
| BsaAI | YACGTR | 3 cut(s) | 104, 115, 355 |
| BsaBI | GATNNNNATC | 3 cut(s) | 3696, 3921, 5370 |
| BsaHI | GRCGYC | 4 cut(s) | 83, 250, 297, 3217 |
| BsaI | GGTCTC | 3 cut(s) | 317, 1865, 4172 |
| BsaWI | WCCGGW | 2 cut(s) | 870, 3568 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 585, 615, 645, 675, 974, 1004 |
| Bse118I | RCCGGY | 3 cut(s) | 382, 1291, 1366 |
| Bse3DI | GCAATG | 5 cut(s) | 1188, 2269, 2907, 4101, 5721 |
| Bse8I | GATNNNNATC | 3 cut(s) | 3696, 3921, 5370 |
| BseCI | ATCGAT | 1 cut(s) | 4870 |
| BseJI | GATNNNNATC | 3 cut(s) | 3696, 3921, 5370 |
| BseMI | GCAATG | 5 cut(s) | 1188, 2269, 2907, 4101, 5721 |
| BseMII | CTCAG | 9 cut(s) | 123, 1400, 1713, 2540, 3022, 3218, 3840, 5826, 6198 |
| BseRI | GAGGAG | 7 cut(s) | 635, 638, 977, 995, 998, 1040, 2813 |
| BseSI | GKGCMC | 1 cut(s) | 120 |
| BseYI | CCCAGC | 4 cut(s) | 119, 950, 1115, 4829 |
| BsgI | GTGCAG | 8 cut(s) | 758, 1502, 2157, 2535, 3231, 3984, 4050, 5676 |
| Bsh1236I | CGCG | 6 cut(s) | 32, 34, 144, 210, 3078, 5063 |
| Bsh1285I | CGRYCG | 1 cut(s) | 59 |
| BshFI | GGCC | 8 cut(s) | 193, 310, 1827, 2565, 5630, 5966, 6041, 6108 |
| BshNI | GGYRCC | 6 cut(s) | 201, 249, 1219, 3216, 3718, 6126 |
| BshVI | ATCGAT | 1 cut(s) | 4870 |
| BsiEI | CGRYCG | 1 cut(s) | 59 |
| BsiHKAI | GWGCWC | 6 cut(s) | 276, 1459, 1494, 3232, 3558, 4067 |
| BsiHKCI | CYCGRG | 4 cut(s) | 214, 327, 4223, 6071 |
| BsiSI | CCGG | 9 cut(s) | 224, 328, 383, 871, 1292, 1367, 1829, 3569, 6042 |
| BsiWI | CGTACG | 1 cut(s) | 336 |
| BslFI | GGGAC | 8 cut(s) | 204, 969, 1451, 1745, 2452, 2993, 3827, 4277 |
| BsmBI | CGTCTC | 2 cut(s) | 1717, 5945 |
| BsmFI | GGGAC | 8 cut(s) | 204, 969, 1451, 1745, 2452, 2993, 3827, 4277 |
| BsmI | GAATGC | 3 cut(s) | 2659, 2689, 5102 |
| BsnI | GGCC | 8 cut(s) | 193, 310, 1827, 2565, 5630, 5966, 6041, 6108 |
| Bso31I | GGTCTC | 3 cut(s) | 317, 1865, 4172 |
| BsoBI | CYCGRG | 4 cut(s) | 214, 327, 4223, 6071 |
| Bsp1286I | GDGCHC | 8 cut(s) | 120, 276, 1363, 1459, 1494, 3232, 3558, 4067 |
| Bsp1407I | TGTACA | 5 cut(s) | 1766, 2122, 2365, 4098, 5094 |
| Bsp19I | CCATGG | 1 cut(s) | 4206 |
| BspANI | GGCC | 8 cut(s) | 193, 310, 1827, 2565, 5630, 5966, 6041, 6108 |
| BspCNI | CTCAG | 9 cut(s) | 124, 1399, 1714, 2539, 3021, 3217, 3841, 5825, 6197 |
| BspDI | ATCGAT | 1 cut(s) | 4870 |
| BspFNI | CGCG | 6 cut(s) | 32, 34, 144, 210, 3078, 5063 |
| BspHI | TCATGA | 1 cut(s) | 715 |
| BspMAI | CTGCAG | 2 cut(s) | 5481, 6259 |
| BspOI | GCTAGC | 1 cut(s) | 800 |
| BspPI | GGATC | 7 cut(s) | 1173, 2352, 2447, 2812, 4845, 5373, 5536 |
| BspQI | GCTCTTC | 2 cut(s) | 4055, 5763 |
| BspT107I | GGYRCC | 6 cut(s) | 201, 249, 1219, 3216, 3718, 6126 |
| BspTNI | GGTCTC | 3 cut(s) | 317, 1865, 4172 |
| BsrBI | CCGCTC | 1 cut(s) | 20 |
| BsrDI | GCAATG | 5 cut(s) | 1188, 2269, 2907, 4101, 5721 |
| BsrFI | RCCGGY | 3 cut(s) | 382, 1291, 1366 |
| BsrGI | TGTACA | 5 cut(s) | 1766, 2122, 2365, 4098, 5094 |
| BssAI | RCCGGY | 3 cut(s) | 382, 1291, 1366 |
| BssNAI | GTATAC | 2 cut(s) | 818, 5418 |
| BssNI | GRCGYC | 4 cut(s) | 83, 250, 297, 3217 |
| BssT1I | CCWWGG | 4 cut(s) | 2191, 4206, 4465, 5383 |
| Bst1107I | GTATAC | 2 cut(s) | 818, 5418 |
| BstACI | GRCGYC | 4 cut(s) | 83, 250, 297, 3217 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2393, 4037, 5683 |
| BstAUI | TGTACA | 5 cut(s) | 1766, 2122, 2365, 4098, 5094 |
| BstBAI | YACGTR | 3 cut(s) | 104, 115, 355 |
| BstDSI | CCRYGG | 2 cut(s) | 142, 4206 |
| BstEII | GGTNACC | 2 cut(s) | 374, 1664 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3403 |
| BstFNI | CGCG | 6 cut(s) | 32, 34, 144, 210, 3078, 5063 |
| BstH2I | RGCGCY | 3 cut(s) | 253, 405, 3220 |
| BstHHI | GCGC | 6 cut(s) | 34, 252, 404, 1579, 3219, 5065 |
| BstMCI | CGRYCG | 1 cut(s) | 59 |
| BstNSI | RCATGY | 6 cut(s) | 1889, 2366, 2725, 2737, 4622, 4670 |
| BstPAI | GACNNNNGTC | 4 cut(s) | 216, 2901, 3953, 4376 |
| BstPI | GGTNACC | 2 cut(s) | 374, 1664 |
| BstSFI | CTRYAG | 6 cut(s) | 2091, 5080, 5313, 5477, 5822, 6255 |
| BstSLI | GKGCMC | 1 cut(s) | 120 |
| BstUI | CGCG | 6 cut(s) | 32, 34, 144, 210, 3078, 5063 |
| BstV2I | GAAGAC | 8 cut(s) | 297, 320, 2217, 2527, 3949, 4025, 5465, 6150 |
| BstX2I | RGATCY | 3 cut(s) | 2344, 3922, 5365 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 859, 3347, 4260 |
| BstYI | RGATCY | 3 cut(s) | 2344, 3922, 5365 |
| BstZ17I | GTATAC | 2 cut(s) | 818, 5418 |
| Bsu15I | ATCGAT | 1 cut(s) | 4870 |
| BsuI | GTATCC | 1 cut(s) | 2873 |
| BsuRI | GGCC | 8 cut(s) | 193, 310, 1827, 2565, 5630, 5966, 6041, 6108 |
| BsuTUI | ATCGAT | 1 cut(s) | 4870 |
| BtgI | CCRYGG | 2 cut(s) | 142, 4206 |
| BtgZI | GCGATG | 1 cut(s) | 359 |
| BtsI | GCAGTG | 6 cut(s) | 276, 1494, 2245, 2382, 3960, 4602 |
| CaiI | CAGNNNCTG | 2 cut(s) | 5785, 6263 |
| CciI | TCATGA | 1 cut(s) | 715 |
| CfoI | GCGC | 6 cut(s) | 34, 252, 404, 1579, 3219, 5065 |
| Cfr10I | RCCGGY | 3 cut(s) | 382, 1291, 1366 |
| Cfr42I | CCGCGG | 1 cut(s) | 145 |
| Cfr9I | CCCGGG | 1 cut(s) | 327 |
| ClaI | ATCGAT | 1 cut(s) | 4870 |
| CseI | GACGC | 5 cut(s) | 72, 286, 4505, 5198, 5242 |
| DinI | GGCGCC | 2 cut(s) | 251, 3218 |
| DraI | TTTAAA | 2 cut(s) | 2964, 4864 |
| DraIII | CACNNNGTG | 1 cut(s) | 2425 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1640, 6188 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1640, 6188 |
| EaeI | YGGCCR | 2 cut(s) | 2563, 5964 |
| EciI | GGCGGA | 3 cut(s) | 666, 1880, 4371 |
| Ecl136II | GAGCTC | 2 cut(s) | 3230, 3556 |
| Eco130I | CCWWGG | 4 cut(s) | 2191, 4206, 4465, 5383 |
| Eco24I | GRGCYC | 3 cut(s) | 1363, 3232, 3558 |
| Eco31I | GGTCTC | 3 cut(s) | 317, 1865, 4172 |
| Eco32I | GATATC | 1 cut(s) | 5143 |
| Eco47I | GGWCC | 9 cut(s) | 73, 1001, 2439, 3073, 3484, 3783, 3814, 4462, 5671 |
| Eco53kI | GAGCTC | 2 cut(s) | 3230, 3556 |
| Eco72I | CACGTG | 3 cut(s) | 104, 115, 355 |
| Eco88I | CYCGRG | 4 cut(s) | 214, 327, 4223, 6071 |
| Eco91I | GGTNACC | 2 cut(s) | 374, 1664 |
| EcoICRI | GAGCTC | 2 cut(s) | 3230, 3556 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3403 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1001, 3814, 4462 |
| EcoO65I | GGTNACC | 2 cut(s) | 374, 1664 |
| EcoRI | GAATTC | 3 cut(s) | 61, 475, 6050 |
| EcoRV | GATATC | 1 cut(s) | 5143 |
| EcoT14I | CCWWGG | 4 cut(s) | 2191, 4206, 4465, 5383 |
| EcoT38I | GRGCYC | 3 cut(s) | 1363, 3232, 3558 |
| EgeI | GGCGCC | 2 cut(s) | 251, 3218 |
| EheI | GGCGCC | 2 cut(s) | 251, 3218 |
| ErhI | CCWWGG | 4 cut(s) | 2191, 4206, 4465, 5383 |
| Esp3I | CGTCTC | 2 cut(s) | 1717, 5945 |
| FaqI | GGGAC | 8 cut(s) | 204, 969, 1451, 1745, 2452, 2993, 3827, 4277 |
| FauI | CCCGC | 2 cut(s) | 640, 5028 |
| FauNDI | CATATG | 2 cut(s) | 2287, 4025 |
| FbaI | TGATCA | 5 cut(s) | 499, 2644, 2856, 3916, 5287 |
| FblI | GTMKAC | 3 cut(s) | 817, 4405, 5417 |
| FriOI | GRGCYC | 3 cut(s) | 1363, 3232, 3558 |
| GlaI | GCGC | 6 cut(s) | 33, 251, 403, 1578, 3218, 5064 |
| GsaI | CCCAGC | 4 cut(s) | 123, 954, 1119, 4833 |
| GsuI | CTGGAG | 4 cut(s) | 4236, 4491, 5243, 6041 |
| HaeII | RGCGCY | 3 cut(s) | 253, 405, 3220 |
| HaeIII | GGCC | 8 cut(s) | 193, 310, 1827, 2565, 5630, 5966, 6041, 6108 |
| HapII | CCGG | 9 cut(s) | 224, 328, 383, 871, 1292, 1367, 1829, 3569, 6042 |
| HgaI | GACGC | 5 cut(s) | 72, 286, 4505, 5198, 5242 |
| HhaI | GCGC | 6 cut(s) | 34, 252, 404, 1579, 3219, 5065 |
| Hin1I | GRCGYC | 4 cut(s) | 83, 250, 297, 3217 |
| Hin6I | GCGC | 6 cut(s) | 32, 250, 402, 1577, 3217, 5063 |
| HinP1I | GCGC | 6 cut(s) | 32, 250, 402, 1577, 3217, 5063 |
| HincII | GTYRAC | 5 cut(s) | 1126, 2709, 4141, 4406, 6225 |
| HindII | GTYRAC | 5 cut(s) | 1126, 2709, 4141, 4406, 6225 |
| HindIII | AAGCTT | 8 cut(s) | 163, 1781, 2694, 3161, 4856, 5493, 6176, 6284 |
| HpaI | GTTAAC | 1 cut(s) | 2709 |
| HpaII | CCGG | 9 cut(s) | 224, 328, 383, 871, 1292, 1367, 1829, 3569, 6042 |
| Hpy99I | CGWCG | 4 cut(s) | 286, 302, 413, 6274 |
| HpyCH4IV | ACGT | 4 cut(s) | 103, 114, 354, 4650 |
| HpySE526I | ACGT | 4 cut(s) | 103, 114, 354, 4650 |
| Hsp92I | GRCGYC | 4 cut(s) | 83, 250, 297, 3217 |
| HspAI | GCGC | 6 cut(s) | 32, 250, 402, 1577, 3217, 5063 |
| KasI | GGCGCC | 2 cut(s) | 249, 3216 |
| KpnI | GGTACC | 1 cut(s) | 6130 |
| KroI | GCCGGC | 2 cut(s) | 382, 1291 |
| KroNI | GCCGGC | 2 cut(s) | 384, 1293 |
| Ksp22I | TGATCA | 5 cut(s) | 499, 2644, 2856, 3916, 5287 |
| KspAI | GTTAAC | 1 cut(s) | 2709 |
| KspI | CCGCGG | 1 cut(s) | 145 |
| LguI | GCTCTTC | 2 cut(s) | 4055, 5763 |
| MaeII | ACGT | 4 cut(s) | 103, 114, 354, 4650 |
| MbiI | CCGCTC | 1 cut(s) | 20 |
| MfeI | CAATTG | 6 cut(s) | 1017, 2648, 3084, 4119, 4608, 5120 |
| MflI | RGATCY | 3 cut(s) | 2344, 3922, 5365 |
| MhlI | GDGCHC | 8 cut(s) | 120, 276, 1363, 1459, 1494, 3232, 3558, 4067 |
| MlsI | TGGCCA | 2 cut(s) | 2565, 5966 |
| MluNI | TGGCCA | 2 cut(s) | 2565, 5966 |
| Mly113I | GGCGCC | 2 cut(s) | 250, 3217 |
| MmeI | TCCRAC | 4 cut(s) | 114, 1588, 2775, 5189 |
| Mox20I | TGGCCA | 2 cut(s) | 2565, 5966 |
| MroNI | GCCGGC | 2 cut(s) | 382, 1291 |
| MroXI | GAANNNNTTC | 5 cut(s) | 2232, 2664, 3444, 3735, 5988 |
| MscI | TGGCCA | 2 cut(s) | 2565, 5966 |
| MslI | CAYNNNNRTG | 3 cut(s) | 784, 2720, 3600 |
| Msp20I | TGGCCA | 2 cut(s) | 2565, 5966 |
| MspA1I | CMGCKG | 7 cut(s) | 52, 123, 144, 367, 2153, 2217, 3157 |
| MspI | CCGG | 9 cut(s) | 224, 328, 383, 871, 1292, 1367, 1829, 3569, 6042 |
| MunI | CAATTG | 6 cut(s) | 1017, 2648, 3084, 4119, 4608, 5120 |
| Mva1269I | GAATGC | 3 cut(s) | 2659, 2689, 5102 |
| MvnI | CGCG | 6 cut(s) | 32, 34, 144, 210, 3078, 5063 |
| NaeI | GCCGGC | 2 cut(s) | 384, 1293 |
| NarI | GGCGCC | 2 cut(s) | 250, 3217 |
| NciI | CCSGG | 5 cut(s) | 224, 328, 329, 1829, 6043 |
| NcoI | CCATGG | 1 cut(s) | 4206 |
| NdeI | CATATG | 2 cut(s) | 2287, 4025 |
| NgoMIV | GCCGGC | 2 cut(s) | 382, 1291 |
| NheI | GCTAGC | 1 cut(s) | 796 |
| NmeAIII | GCCGAG | 1 cut(s) | 4150 |
| NmuCI | GTSAC | 9 cut(s) | 110, 374, 1642, 1664, 3877, 4693, 4849, 5057, 5807 |
| NspI | RCATGY | 6 cut(s) | 1889, 2366, 2725, 2737, 4622, 4670 |
| OliI | CACNNNNGTG | 1 cut(s) | 784 |
| PaeI | GCATGC | 1 cut(s) | 2737 |
| PaeR7I | CTCGAG | 2 cut(s) | 4223, 6071 |
| PagI | TCATGA | 1 cut(s) | 715 |
| PasI | CCCWGGG | 1 cut(s) | 5791 |
| PciI | ACATGT | 1 cut(s) | 2721 |
| PciSI | GCTCTTC | 2 cut(s) | 4055, 5763 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 405 |
| PctI | GAATGC | 3 cut(s) | 2659, 2689, 5102 |
| PdiI | GCCGGC | 2 cut(s) | 384, 1293 |
| PdmI | GAANNNNTTC | 5 cut(s) | 2232, 2664, 3444, 3735, 5988 |
| Pfl23II | CGTACG | 1 cut(s) | 336 |
| PflFI | GACNNNGTC | 2 cut(s) | 296, 4715 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 4936, 5742 |
| PfoI | TCCNGGA | 1 cut(s) | 5872 |
| Ple19I | CGATCG | 1 cut(s) | 59 |
| PluTI | GGCGCC | 2 cut(s) | 253, 3220 |
| PmaCI | CACGTG | 3 cut(s) | 104, 115, 355 |
| PmlI | CACGTG | 3 cut(s) | 104, 115, 355 |
| Ppu21I | YACGTR | 3 cut(s) | 104, 115, 355 |
| PpuMI | RGGWCCY | 3 cut(s) | 1001, 3814, 4462 |
| PscI | ACATGT | 1 cut(s) | 2721 |
| PshAI | GACNNNNGTC | 4 cut(s) | 216, 2901, 3953, 4376 |
| PshBI | ATTAAT | 1 cut(s) | 3126 |
| PsiI | TTATAA | 3 cut(s) | 6197, 6242, 6282 |
| Psp124BI | GAGCTC | 2 cut(s) | 3232, 3558 |
| Psp5II | RGGWCCY | 3 cut(s) | 1001, 3814, 4462 |
| PspCI | CACGTG | 3 cut(s) | 104, 115, 355 |
| PspEI | GGTNACC | 2 cut(s) | 374, 1664 |
| PspFI | CCCAGC | 4 cut(s) | 119, 950, 1115, 4829 |
| PspLI | CGTACG | 1 cut(s) | 336 |
| PspPPI | RGGWCCY | 3 cut(s) | 1001, 3814, 4462 |
| PspXI | VCTCGAGB | 1 cut(s) | 4223 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 5502, 5534 |
| PstI | CTGCAG | 2 cut(s) | 5481, 6259 |
| PstNI | CAGNNNCTG | 2 cut(s) | 5785, 6263 |
| PsuI | RGATCY | 3 cut(s) | 2344, 3922, 5365 |
| PsyI | GACNNNGTC | 2 cut(s) | 296, 4715 |
| PvuI | CGATCG | 1 cut(s) | 59 |
| PvuII | CAGCTG | 4 cut(s) | 52, 367, 2153, 3157 |
| RseI | CAYNNNNRTG | 3 cut(s) | 784, 2720, 3600 |
| SacI | GAGCTC | 2 cut(s) | 3232, 3558 |
| SacII | CCGCGG | 1 cut(s) | 145 |
| SalI | GTCGAC | 1 cut(s) | 4404 |
| SapI | GCTCTTC | 2 cut(s) | 4055, 5763 |
| SduI | GDGCHC | 8 cut(s) | 120, 276, 1363, 1459, 1494, 3232, 3558, 4067 |
| SfcI | CTRYAG | 6 cut(s) | 2091, 5080, 5313, 5477, 5822, 6255 |
| SfoI | GGCGCC | 2 cut(s) | 251, 3218 |
| Sfr274I | CTCGAG | 2 cut(s) | 4223, 6071 |
| Sfr303I | CCGCGG | 1 cut(s) | 145 |
| SgrBI | CCGCGG | 1 cut(s) | 145 |
| SinI | GGWCC | 9 cut(s) | 73, 1001, 2439, 3073, 3484, 3783, 3814, 4462, 5671 |
| SlaI | CTCGAG | 2 cut(s) | 4223, 6071 |
| SmaI | CCCGGG | 1 cut(s) | 329 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 784, 2720, 3600 |
| SmlI | CTYRAG | 6 cut(s) | 2128, 3951, 4223, 5296, 5490, 6071 |
| SmoI | CTYRAG | 6 cut(s) | 2128, 3951, 4223, 5296, 5490, 6071 |
| SpeI | ACTAGT | 2 cut(s) | 1046, 4306 |
| SphI | GCATGC | 1 cut(s) | 2737 |
| SspDI | GGCGCC | 2 cut(s) | 249, 3216 |
| SspI | AATATT | 3 cut(s) | 1444, 3665, 3749 |
| SstI | GAGCTC | 2 cut(s) | 3232, 3558 |
| StyI | CCWWGG | 4 cut(s) | 2191, 4206, 4465, 5383 |
| TaiI | ACGT | 4 cut(s) | 106, 117, 357, 4653 |
| TaqII | GACCGA | 1 cut(s) | 2456 |
| TatI | WGTACW | 7 cut(s) | 932, 1557, 1766, 2122, 2365, 4098, 5094 |
| TauI | GCSGC | 4 cut(s) | 126, 147, 210, 3040 |
| TseFI | GTSAC | 9 cut(s) | 110, 374, 1642, 1664, 3877, 4693, 4849, 5057, 5807 |
| Tsp45I | GTSAC | 9 cut(s) | 110, 374, 1642, 1664, 3877, 4693, 4849, 5057, 5807 |
| TspGWI | ACGGA | 5 cut(s) | 299, 3746, 3885, 4303, 5969 |
| TspMI | CCCGGG | 1 cut(s) | 327 |
| Tth111I | GACNNNGTC | 2 cut(s) | 296, 4715 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 4936, 5742 |
| VpaK11BI | GGWCC | 9 cut(s) | 73, 1001, 2439, 3073, 3484, 3783, 3814, 4462, 5671 |
| VspI | ATTAAT | 1 cut(s) | 3126 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3403 |
| XbaI | TCTAGA | 2 cut(s) | 4382, 5639 |
| XceI | RCATGY | 6 cut(s) | 1889, 2366, 2725, 2737, 4622, 4670 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 4343, 4961, 5870 |
| XhoI | CTCGAG | 2 cut(s) | 4223, 6071 |
| XmaI | CCCGGG | 1 cut(s) | 327 |
| XmiI | GTMKAC | 3 cut(s) | 817, 4405, 5417 |
| XmnI | GAANNNNTTC | 5 cut(s) | 2232, 2664, 3444, 3735, 5988 |