U5 small nuclear ribonucleoprotein 200 kDa
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| BRR2_plug | PF21188 | 105 - 166 | 6.4e-08 | Pre-mRNA-splicing helicase BRR2 plug domain |
| Helicase_PWI | PF18149 | 252 - 339 | 3.8e-23 | N-terminal helicase PWI domain |
| DEAD | PF00270 | 465 - 632 | 9.8e-31 | DEAD/DEAH box helicase |
| ResIII | PF04851 | 471 - 627 | 9.6e-12 | Type III restriction enzyme, res subunit |
| Helicase_C | PF00271 | 737 - 831 | 1.4e-09 | Helicase conserved C-terminal domain |
| WHD_SNRNP200 | PF23445 | 862 - 938 | 1.9e-23 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 954 - 986 | 1.1e-07 | Sec63 Brl domain |
| Sec63 | PF02889 | 993 - 1190 | 9.2e-49 | Sec63 Brl domain |
| ResIII | PF04851 | 1232 - 1394 | 8.9e-11 | Type III restriction enzyme, res subunit |
| DEAD | PF00270 | 1233 - 1407 | 1.8e-29 | DEAD/DEAH box helicase |
| WHD_SNRNP200 | PF23445 | 1640 - 1721 | 2e-32 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 1727 - 2042 | 6.7e-65 | Sec63 Brl domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 867, 5058 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3924 |
| AatII | GACGTC | 1 cut(s) | 247 |
| Acc16I | TGCGCA | 2 cut(s) | 3790, 5082 |
| Acc36I | ACCTGC | 1 cut(s) | 3633 |
| AccB1I | GGYRCC | 1 cut(s) | 1216 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 4726, 5544 |
| AccI | GTMKAC | 1 cut(s) | 1533 |
| AccII | CGCG | 3 cut(s) | 3843, 4038, 4367 |
| AclWI | GGATC | 8 cut(s) | 2319, 2779, 3468, 4230, 4458, 5393, 5613, 6019 |
| AcoI | YGGCCR | 1 cut(s) | 4756 |
| AcsI | RAATTY | 7 cut(s) | 427, 484, 871, 1764, 2196, 3486, 5669 |
| AcvI | CACGTG | 1 cut(s) | 107 |
| AcyI | GRCGYC | 3 cut(s) | 244, 1605, 2983 |
| AdeI | CACNNNGTG | 1 cut(s) | 5126 |
| AfeI | AGCGCT | 1 cut(s) | 4194 |
| AflII | CTTAAG | 1 cut(s) | 5753 |
| AflIII | ACRYGT | 3 cut(s) | 1912, 4429, 5896 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4639 |
| AjiI | CACGTC | 2 cut(s) | 5013, 5407 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 3084, 3116, 3140, 3172 |
| Alw21I | GWGCWC | 4 cut(s) | 926, 1459, 2094, 2998 |
| Alw26I | GTCTC | 9 cut(s) | 305, 1179, 1655, 1977, 2350, 4144, 4144, 4527, 4569 |
| Alw44I | GTGCAC | 2 cut(s) | 922, 2090 |
| AlwI | GGATC | 8 cut(s) | 2319, 2779, 3468, 4230, 4458, 5393, 5613, 6019 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1639, 4790, 6056 |
| Ama87I | CYCGRG | 2 cut(s) | 73, 2095 |
| Aor51HI | AGCGCT | 1 cut(s) | 4194 |
| AoxI | GGCC | 9 cut(s) | 66, 1789, 1930, 1958, 3159, 3822, 4255, 4756, 5902 |
| ApaLI | GTGCAC | 2 cut(s) | 922, 2090 |
| ApeKI | GCWGC | 9 cut(s) | 7, 1180, 1421, 2542, 2795, 3275, 3286, 3758, 4585 |
| ApoI | RAATTY | 7 cut(s) | 427, 484, 871, 1764, 2196, 3486, 5669 |
| AseI | ATTAAT | 1 cut(s) | 831 |
| Asp700I | GAANNNNTTC | 9 cut(s) | 798, 914, 1281, 2199, 3354, 3411, 3498, 4767, 5739 |
| AspLEI | GCGC | 7 cut(s) | 37, 3280, 3791, 3843, 4195, 4284, 5083 |
| AsuC2I | CCSGG | 3 cut(s) | 43, 673, 4760 |
| AsuHPI | GGTGA | 9 cut(s) | 1160, 1624, 1640, 1669, 2062, 2737, 3148, 5353, 6179 |
| AsuII | TTCGAA | 1 cut(s) | 5347 |
| AsuNHI | GCTAGC | 1 cut(s) | 2879 |
| AvaI | CYCGRG | 2 cut(s) | 73, 2095 |
| AvaII | GGWCC | 7 cut(s) | 1009, 2406, 3622, 3917, 5473, 5887, 5931 |
| BaeGI | GKGCMC | 3 cut(s) | 926, 2094, 2535 |
| BanI | GGYRCC | 1 cut(s) | 1216 |
| BanII | GRGCYC | 4 cut(s) | 1363, 2998, 3031, 4999 |
| BauI | CACGAG | 5 cut(s) | 116, 936, 1739, 2121, 4607 |
| BbrPI | CACGTG | 1 cut(s) | 107 |
| Bbv12I | GWGCWC | 4 cut(s) | 926, 1459, 2094, 2998 |
| BbvI | GCAGC | 9 cut(s) | 19, 1167, 1408, 2529, 2782, 3287, 3298, 3745, 4597 |
| BceAI | ACGGC | 3 cut(s) | 3358, 3899, 4270 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 5156, 5190 |
| BciVI | GTATCC | 3 cut(s) | 801, 3609, 5959 |
| BclI | TGATCA | 2 cut(s) | 2823, 4627 |
| BcnI | CCSGG | 3 cut(s) | 43, 673, 4760 |
| BcoDI | GTCTC | 9 cut(s) | 305, 1179, 1655, 1977, 2350, 4144, 4144, 4527, 4569 |
| BfmI | CTRYAG | 4 cut(s) | 2058, 5026, 5624, 6048 |
| BfoI | RGCGCY | 1 cut(s) | 4196 |
| BfrI | CTTAAG | 1 cut(s) | 5753 |
| BfuAI | ACCTGC | 1 cut(s) | 3633 |
| BfuI | GTATCC | 3 cut(s) | 801, 3609, 5959 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1028 |
| BglII | AGATCT | 1 cut(s) | 1253 |
| Bme18I | GGWCC | 7 cut(s) | 1009, 2406, 3622, 3917, 5473, 5887, 5931 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4639 |
| BmeT110I | CYCGRG | 2 cut(s) | 73, 2095 |
| BmgBI | CACGTC | 2 cut(s) | 5013, 5407 |
| BmrI | ACTGGG | 4 cut(s) | 1473, 2538, 4280, 4778 |
| BmtI | GCTAGC | 1 cut(s) | 2883 |
| BmuI | ACTGGG | 4 cut(s) | 1473, 2538, 4280, 4778 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2868, 3713 |
| BpmI | CTGGAG | 4 cut(s) | 3996, 5349, 5411, 5855 |
| Bpu10I | CCTNAGC | 1 cut(s) | 4446 |
| Bpu14I | TTCGAA | 1 cut(s) | 5347 |
| BpuEI | CTTGAG | 2 cut(s) | 801, 5300 |
| BpuMI | CCSGG | 3 cut(s) | 43, 673, 4760 |
| Bsa29I | ATCGAT | 1 cut(s) | 1001 |
| BsaAI | YACGTR | 2 cut(s) | 107, 1913 |
| BsaBI | GATNNNNATC | 1 cut(s) | 4001 |
| BsaHI | GRCGYC | 3 cut(s) | 244, 1605, 2983 |
| BsaI | GGTCTC | 2 cut(s) | 2350, 4527 |
| BsaJI | CCNNGG | 9 cut(s) | 90, 2006, 2158, 2409, 3112, 3162, 3876, 4218, 5927 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 965, 995 |
| Bse118I | RCCGGY | 3 cut(s) | 125, 145, 2380 |
| Bse3DI | GCAATG | 6 cut(s) | 1302, 2874, 4567, 4907, 5523, 5574 |
| Bse8I | GATNNNNATC | 1 cut(s) | 4001 |
| BseCI | ATCGAT | 1 cut(s) | 1001 |
| BseDI | CCNNGG | 9 cut(s) | 90, 2006, 2158, 2409, 3112, 3162, 3876, 4218, 5927 |
| BseJI | GATNNNNATC | 1 cut(s) | 4001 |
| BseMI | GCAATG | 6 cut(s) | 1302, 2874, 4567, 4907, 5523, 5574 |
| BseRI | GAGGAG | 7 cut(s) | 617, 659, 677, 986, 989, 2780, 4860 |
| BseSI | GKGCMC | 3 cut(s) | 926, 2094, 2535 |
| BseXI | GCAGC | 9 cut(s) | 19, 1167, 1408, 2529, 2782, 3287, 3298, 3745, 4597 |
| BseYI | CCCAGC | 6 cut(s) | 2276, 2978, 4496, 5456, 5807, 5855 |
| BsgI | GTGCAG | 6 cut(s) | 647, 2124, 2502, 3305, 3744, 5377 |
| Bsh1236I | CGCG | 3 cut(s) | 3843, 4038, 4367 |
| BshFI | GGCC | 9 cut(s) | 68, 1791, 1932, 1960, 3161, 3824, 4257, 4758, 5904 |
| BshNI | GGYRCC | 1 cut(s) | 1216 |
| BshVI | ATCGAT | 1 cut(s) | 1001 |
| BsiHKAI | GWGCWC | 4 cut(s) | 926, 1459, 2094, 2998 |
| BsiHKCI | CYCGRG | 2 cut(s) | 73, 2095 |
| BsiSI | CCGG | 8 cut(s) | 43, 126, 134, 146, 235, 672, 2381, 4759 |
| BsiWI | CGTACG | 1 cut(s) | 4362 |
| BslFI | GGGAC | 7 cut(s) | 1127, 1143, 1949, 2419, 2917, 3930, 4626 |
| BsmAI | GTCTC | 9 cut(s) | 305, 1179, 1655, 1977, 2350, 4144, 4144, 4527, 4569 |
| BsmBI | CGTCTC | 3 cut(s) | 305, 4144, 4569 |
| BsmFI | GGGAC | 7 cut(s) | 1127, 1143, 1949, 2419, 2917, 3930, 4626 |
| BsmI | GAATGC | 4 cut(s) | 478, 1370, 2626, 4302 |
| BsnI | GGCC | 9 cut(s) | 68, 1791, 1932, 1960, 3161, 3824, 4257, 4758, 5904 |
| Bso31I | GGTCTC | 2 cut(s) | 2350, 4527 |
| BsoBI | CYCGRG | 2 cut(s) | 73, 2095 |
| Bsp119I | TTCGAA | 1 cut(s) | 5347 |
| Bsp1286I | GDGCHC | 8 cut(s) | 926, 1363, 1459, 2094, 2535, 2998, 3031, 4999 |
| Bsp1407I | TGTACA | 1 cut(s) | 5767 |
| Bsp19I | CCATGG | 2 cut(s) | 2006, 3112 |
| BspANI | GGCC | 9 cut(s) | 68, 1791, 1932, 1960, 3161, 3824, 4257, 4758, 5904 |
| BspDI | ATCGAT | 1 cut(s) | 1001 |
| BspFNI | CGCG | 3 cut(s) | 3843, 4038, 4367 |
| BspHI | TCATGA | 1 cut(s) | 3421 |
| BspMAI | CTGCAG | 1 cut(s) | 6052 |
| BspMI | ACCTGC | 1 cut(s) | 3633 |
| BspOI | GCTAGC | 1 cut(s) | 2883 |
| BspPI | GGATC | 8 cut(s) | 2319, 2779, 3468, 4230, 4458, 5393, 5613, 6019 |
| BspQI | GCTCTTC | 2 cut(s) | 1088, 5427 |
| BspT104I | TTCGAA | 1 cut(s) | 5347 |
| BspT107I | GGYRCC | 1 cut(s) | 1216 |
| BspTI | CTTAAG | 1 cut(s) | 5753 |
| BspTNI | GGTCTC | 2 cut(s) | 2350, 4527 |
| BsrDI | GCAATG | 6 cut(s) | 1302, 2874, 4567, 4907, 5523, 5574 |
| BsrFI | RCCGGY | 3 cut(s) | 125, 145, 2380 |
| BsrGI | TGTACA | 1 cut(s) | 5767 |
| BssAI | RCCGGY | 3 cut(s) | 125, 145, 2380 |
| BssECI | CCNNGG | 9 cut(s) | 90, 2006, 2158, 2409, 3112, 3162, 3876, 4218, 5927 |
| BssNAI | GTATAC | 1 cut(s) | 1534 |
| BssNI | GRCGYC | 3 cut(s) | 244, 1605, 2983 |
| BssSI | CACGAG | 5 cut(s) | 116, 936, 1739, 2121, 4607 |
| BssT1I | CCWWGG | 5 cut(s) | 2006, 2158, 3112, 3876, 4218 |
| Bst1107I | GTATAC | 1 cut(s) | 1534 |
| Bst2BI | CACGAG | 5 cut(s) | 116, 936, 1739, 2121, 4607 |
| BstACI | GRCGYC | 3 cut(s) | 244, 1605, 2983 |
| BstAFI | CTTAAG | 1 cut(s) | 5753 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 4493 |
| BstAUI | TGTACA | 1 cut(s) | 5767 |
| BstBAI | YACGTR | 2 cut(s) | 107, 1913 |
| BstBI | TTCGAA | 1 cut(s) | 5347 |
| BstDSI | CCRYGG | 3 cut(s) | 90, 2006, 3112 |
| BstEII | GGTNACC | 1 cut(s) | 1628 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 3166, 3864 |
| BstFNI | CGCG | 3 cut(s) | 3843, 4038, 4367 |
| BstH2I | RGCGCY | 1 cut(s) | 4196 |
| BstHHI | GCGC | 7 cut(s) | 37, 3280, 3791, 3843, 4195, 4284, 5083 |
| BstMAI | GTCTC | 9 cut(s) | 305, 1179, 1655, 1977, 2350, 4144, 4144, 4527, 4569 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2868, 3713 |
| BstPI | GGTNACC | 1 cut(s) | 1628 |
| BstSFI | CTRYAG | 4 cut(s) | 2058, 5026, 5624, 6048 |
| BstSLI | GKGCMC | 3 cut(s) | 926, 2094, 2535 |
| BstUI | CGCG | 3 cut(s) | 3843, 4038, 4367 |
| BstV1I | GCAGC | 9 cut(s) | 19, 1167, 1408, 2529, 2782, 3287, 3298, 3745, 4597 |
| BstX2I | RGATCY | 6 cut(s) | 1253, 2311, 4222, 4450, 5398, 6024 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3113, 4020 |
| BstYI | RGATCY | 6 cut(s) | 1253, 2311, 4222, 4450, 5398, 6024 |
| BstZ17I | GTATAC | 1 cut(s) | 1534 |
| Bsu15I | ATCGAT | 1 cut(s) | 1001 |
| BsuI | GTATCC | 3 cut(s) | 801, 3609, 5959 |
| BsuRI | GGCC | 9 cut(s) | 68, 1791, 1932, 1960, 3161, 3824, 4257, 4758, 5904 |
| BsuTUI | ATCGAT | 1 cut(s) | 1001 |
| BtgI | CCRYGG | 3 cut(s) | 90, 2006, 3112 |
| BtgZI | GCGATG | 1 cut(s) | 4361 |
| BtrI | CACGTC | 2 cut(s) | 5013, 5407 |
| BtsI | GCAGTG | 3 cut(s) | 782, 1105, 5981 |
| BveI | ACCTGC | 1 cut(s) | 3633 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1639, 4790, 6056 |
| CciI | TCATGA | 1 cut(s) | 3421 |
| CfoI | GCGC | 7 cut(s) | 37, 3280, 3791, 3843, 4195, 4284, 5083 |
| Cfr10I | RCCGGY | 3 cut(s) | 125, 145, 2380 |
| ClaI | ATCGAT | 1 cut(s) | 1001 |
| CpoI | CGGWCCG | 1 cut(s) | 5887 |
| CseI | GACGC | 5 cut(s) | 322, 1594, 2972, 4161, 4586 |
| CspI | CGGWCCG | 1 cut(s) | 5887 |
| DraI | TTTAAA | 1 cut(s) | 3975 |
| DraIII | CACNNNGTG | 1 cut(s) | 5126 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3924 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4639 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3924 |
| EaeI | YGGCCR | 1 cut(s) | 4756 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4639 |
| EciI | GGCGGA | 3 cut(s) | 164, 410, 3492 |
| Ecl136II | GAGCTC | 1 cut(s) | 2996 |
| Eco130I | CCWWGG | 5 cut(s) | 2006, 2158, 3112, 3876, 4218 |
| Eco147I | AGGCCT | 2 cut(s) | 1960, 3824 |
| Eco24I | GRGCYC | 4 cut(s) | 1363, 2998, 3031, 4999 |
| Eco31I | GGTCTC | 2 cut(s) | 2350, 4527 |
| Eco32I | GATATC | 3 cut(s) | 1699, 3130, 5924 |
| Eco47I | GGWCC | 7 cut(s) | 1009, 2406, 3622, 3917, 5473, 5887, 5931 |
| Eco47III | AGCGCT | 1 cut(s) | 4194 |
| Eco53kI | GAGCTC | 1 cut(s) | 2996 |
| Eco72I | CACGTG | 1 cut(s) | 107 |
| Eco88I | CYCGRG | 2 cut(s) | 73, 2095 |
| Eco91I | GGTNACC | 1 cut(s) | 1628 |
| EcoICRI | GAGCTC | 1 cut(s) | 2996 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 3166, 3864 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1790, 2406 |
| EcoO65I | GGTNACC | 1 cut(s) | 1628 |
| EcoRI | GAATTC | 1 cut(s) | 484 |
| EcoRV | GATATC | 3 cut(s) | 1699, 3130, 5924 |
| EcoT14I | CCWWGG | 5 cut(s) | 2006, 2158, 3112, 3876, 4218 |
| EcoT38I | GRGCYC | 4 cut(s) | 1363, 2998, 3031, 4999 |
| ErhI | CCWWGG | 5 cut(s) | 2006, 2158, 3112, 3876, 4218 |
| Esp3I | CGTCTC | 3 cut(s) | 305, 4144, 4569 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 4059, 4091, 4880, 4912 |
| FaqI | GGGAC | 7 cut(s) | 1127, 1143, 1949, 2419, 2917, 3930, 4626 |
| FauI | CCCGC | 1 cut(s) | 4031 |
| FauNDI | CATATG | 4 cut(s) | 2254, 2506, 3785, 5416 |
| FbaI | TGATCA | 2 cut(s) | 2823, 4627 |
| FblI | GTMKAC | 1 cut(s) | 1533 |
| FriOI | GRGCYC | 4 cut(s) | 1363, 2998, 3031, 4999 |
| FspAI | RTGCGCAY | 1 cut(s) | 5082 |
| FspI | TGCGCA | 2 cut(s) | 3790, 5082 |
| GlaI | GCGC | 7 cut(s) | 36, 3279, 3790, 3842, 4194, 4283, 5082 |
| GsaI | CCCAGC | 6 cut(s) | 2280, 2982, 4500, 5460, 5811, 5859 |
| GsuI | CTGGAG | 4 cut(s) | 3996, 5349, 5411, 5855 |
| HaeII | RGCGCY | 1 cut(s) | 4196 |
| HaeIII | GGCC | 9 cut(s) | 68, 1791, 1932, 1960, 3161, 3824, 4257, 4758, 5904 |
| HapII | CCGG | 8 cut(s) | 43, 126, 134, 146, 235, 672, 2381, 4759 |
| HgaI | GACGC | 5 cut(s) | 322, 1594, 2972, 4161, 4586 |
| HhaI | GCGC | 7 cut(s) | 37, 3280, 3791, 3843, 4195, 4284, 5083 |
| Hin1I | GRCGYC | 3 cut(s) | 244, 1605, 2983 |
| Hin6I | GCGC | 7 cut(s) | 35, 3278, 3789, 3841, 4193, 4282, 5081 |
| HinP1I | GCGC | 7 cut(s) | 35, 3278, 3789, 3841, 4193, 4282, 5081 |
| HincII | GTYRAC | 1 cut(s) | 5710 |
| HindII | GTYRAC | 1 cut(s) | 5710 |
| HindIII | AAGCTT | 3 cut(s) | 747, 785, 2661 |
| HpaII | CCGG | 8 cut(s) | 43, 126, 134, 146, 235, 672, 2381, 4759 |
| HphI | GGTGA | 9 cut(s) | 1160, 1624, 1640, 1669, 2062, 2737, 3148, 5353, 6179 |
| Hpy99I | CGWCG | 5 cut(s) | 164, 181, 246, 249, 5171 |
| HpyCH4IV | ACGT | 9 cut(s) | 106, 244, 1536, 1912, 4361, 5012, 5169, 5406, 5822 |
| HpySE526I | ACGT | 9 cut(s) | 106, 244, 1536, 1912, 4361, 5012, 5169, 5406, 5822 |
| Hsp92I | GRCGYC | 3 cut(s) | 244, 1605, 2983 |
| HspAI | GCGC | 7 cut(s) | 35, 3278, 3789, 3841, 4193, 4282, 5081 |
| KflI | GGGWCCC | 1 cut(s) | 2406 |
| KroI | GCCGGC | 1 cut(s) | 2380 |
| KroNI | GCCGGC | 1 cut(s) | 2382 |
| Ksp22I | TGATCA | 2 cut(s) | 2823, 4627 |
| LguI | GCTCTTC | 2 cut(s) | 1088, 5427 |
| Lsp1109I | GCAGC | 9 cut(s) | 19, 1167, 1408, 2529, 2782, 3287, 3298, 3745, 4597 |
| MaeII | ACGT | 9 cut(s) | 106, 244, 1536, 1912, 4361, 5012, 5169, 5406, 5822 |
| MfeI | CAATTG | 4 cut(s) | 2021, 2615, 4371, 5226 |
| MflI | RGATCY | 6 cut(s) | 1253, 2311, 4222, 4450, 5398, 6024 |
| MhlI | GDGCHC | 8 cut(s) | 926, 1363, 1459, 2094, 2535, 2998, 3031, 4999 |
| MlyI | GAGTC | 7 cut(s) | 89, 1378, 1636, 3025, 3703, 5606, 5968 |
| MmeI | TCCRAC | 6 cut(s) | 227, 1966, 2655, 3123, 4459, 5754 |
| MroNI | GCCGGC | 1 cut(s) | 2380 |
| MroXI | GAANNNNTTC | 9 cut(s) | 798, 914, 1281, 2199, 3354, 3411, 3498, 4767, 5739 |
| MslI | CAYNNNNRTG | 2 cut(s) | 5816, 6179 |
| MspA1I | CMGCKG | 3 cut(s) | 1180, 2302, 4711 |
| MspCI | CTTAAG | 1 cut(s) | 5753 |
| MspI | CCGG | 8 cut(s) | 43, 126, 134, 146, 235, 672, 2381, 4759 |
| MunI | CAATTG | 4 cut(s) | 2021, 2615, 4371, 5226 |
| Mva1269I | GAATGC | 4 cut(s) | 478, 1370, 2626, 4302 |
| MvnI | CGCG | 3 cut(s) | 3843, 4038, 4367 |
| NaeI | GCCGGC | 1 cut(s) | 2382 |
| NciI | CCSGG | 3 cut(s) | 43, 673, 4760 |
| NcoI | CCATGG | 2 cut(s) | 2006, 3112 |
| NdeI | CATATG | 4 cut(s) | 2254, 2506, 3785, 5416 |
| NgoMIV | GCCGGC | 1 cut(s) | 2380 |
| NheI | GCTAGC | 1 cut(s) | 2879 |
| NmeAIII | GCCGAG | 3 cut(s) | 241, 399, 6020 |
| NsbI | TGCGCA | 2 cut(s) | 3790, 5082 |
| NspV | TTCGAA | 1 cut(s) | 5347 |
| PaeI | GCATGC | 2 cut(s) | 3841, 5081 |
| PaeR7I | CTCGAG | 2 cut(s) | 73, 2095 |
| PagI | TCATGA | 1 cut(s) | 3421 |
| PceI | AGGCCT | 2 cut(s) | 1960, 3824 |
| PciI | ACATGT | 2 cut(s) | 4429, 5896 |
| PciSI | GCTCTTC | 2 cut(s) | 1088, 5427 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 238, 320, 2128, 5163, 5385 |
| PctI | GAATGC | 4 cut(s) | 478, 1370, 2626, 4302 |
| PdiI | GCCGGC | 1 cut(s) | 2382 |
| PdmI | GAANNNNTTC | 9 cut(s) | 798, 914, 1281, 2199, 3354, 3411, 3498, 4767, 5739 |
| Pfl23II | CGTACG | 1 cut(s) | 4362 |
| PflFI | GACNNNGTC | 1 cut(s) | 3746 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 4726, 5544 |
| PfoI | TCCNGGA | 1 cut(s) | 5674 |
| PleI | GAGTC | 7 cut(s) | 89, 1378, 1636, 3024, 3703, 5606, 5968 |
| PmaCI | CACGTG | 1 cut(s) | 107 |
| PmlI | CACGTG | 1 cut(s) | 107 |
| PpsI | GAGTC | 7 cut(s) | 89, 1378, 1636, 3024, 3703, 5606, 5968 |
| Ppu21I | YACGTR | 2 cut(s) | 107, 1913 |
| PpuMI | RGGWCCY | 1 cut(s) | 2406 |
| PscI | ACATGT | 2 cut(s) | 4429, 5896 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2868, 3713 |
| PshBI | ATTAAT | 1 cut(s) | 831 |
| PsiI | TTATAA | 2 cut(s) | 867, 5058 |
| Psp124BI | GAGCTC | 1 cut(s) | 2998 |
| Psp5II | RGGWCCY | 1 cut(s) | 2406 |
| PspCI | CACGTG | 1 cut(s) | 107 |
| PspEI | GGTNACC | 1 cut(s) | 1628 |
| PspFI | CCCAGC | 6 cut(s) | 2276, 2978, 4496, 5456, 5807, 5855 |
| PspLI | CGTACG | 1 cut(s) | 4362 |
| PspPPI | RGGWCCY | 1 cut(s) | 2406 |
| PspXI | VCTCGAGB | 2 cut(s) | 73, 2095 |
| PstI | CTGCAG | 1 cut(s) | 6052 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1639, 4790, 6056 |
| PsuI | RGATCY | 6 cut(s) | 1253, 2311, 4222, 4450, 5398, 6024 |
| PsyI | GACNNNGTC | 1 cut(s) | 3746 |
| PvuII | CAGCTG | 2 cut(s) | 1180, 2302 |
| RseI | CAYNNNNRTG | 2 cut(s) | 5816, 6179 |
| Rsr2I | CGGWCCG | 1 cut(s) | 5887 |
| RsrII | CGGWCCG | 1 cut(s) | 5887 |
| SacI | GAGCTC | 1 cut(s) | 2998 |
| SapI | GCTCTTC | 2 cut(s) | 1088, 5427 |
| SchI | GAGTC | 7 cut(s) | 89, 1378, 1636, 3025, 3703, 5606, 5968 |
| SduI | GDGCHC | 8 cut(s) | 926, 1363, 1459, 2094, 2535, 2998, 3031, 4999 |
| SfcI | CTRYAG | 4 cut(s) | 2058, 5026, 5624, 6048 |
| Sfr274I | CTCGAG | 2 cut(s) | 73, 2095 |
| SfuI | TTCGAA | 1 cut(s) | 5347 |
| SinI | GGWCC | 7 cut(s) | 1009, 2406, 3622, 3917, 5473, 5887, 5931 |
| SlaI | CTCGAG | 2 cut(s) | 73, 2095 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 5816, 6179 |
| SmlI | CTYRAG | 5 cut(s) | 73, 816, 2095, 5279, 5753 |
| SmoI | CTYRAG | 5 cut(s) | 73, 816, 2095, 5279, 5753 |
| SphI | GCATGC | 2 cut(s) | 3841, 5081 |
| SseBI | AGGCCT | 2 cut(s) | 1960, 3824 |
| SspI | AATATT | 4 cut(s) | 1528, 3412, 3428, 4748 |
| SstI | GAGCTC | 1 cut(s) | 2998 |
| StuI | AGGCCT | 2 cut(s) | 1960, 3824 |
| StyI | CCWWGG | 5 cut(s) | 2006, 2158, 3112, 3876, 4218 |
| TaiI | ACGT | 9 cut(s) | 109, 247, 1539, 1915, 4364, 5015, 5172, 5409, 5825 |
| TatI | WGTACW | 4 cut(s) | 377, 2679, 3304, 5767 |
| TauI | GCSGC | 6 cut(s) | 323, 373, 395, 3100, 4370, 4711 |
| TseI | GCWGC | 9 cut(s) | 7, 1180, 1421, 2542, 2795, 3275, 3286, 3758, 4585 |
| TspGWI | ACGGA | 2 cut(s) | 107, 3648 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3746 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 4726, 5544 |
| Vha464I | CTTAAG | 1 cut(s) | 5753 |
| VneI | GTGCAC | 2 cut(s) | 922, 2090 |
| VpaK11BI | GGWCC | 7 cut(s) | 1009, 2406, 3622, 3917, 5473, 5887, 5931 |
| VspI | ATTAAT | 1 cut(s) | 831 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 3166, 3864 |
| XapI | RAATTY | 7 cut(s) | 427, 484, 871, 1764, 2196, 3486, 5669 |
| XbaI | TCTAGA | 1 cut(s) | 98 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 76, 5672 |
| XhoI | CTCGAG | 2 cut(s) | 73, 2095 |
| XmiI | GTMKAC | 1 cut(s) | 1533 |
| XmnI | GAANNNNTTC | 9 cut(s) | 798, 914, 1281, 2199, 3354, 3411, 3498, 4767, 5739 |
| ZraI | GACGTC | 1 cut(s) | 245 |