U5 small nuclear ribonucleoprotein 200 kDa
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| BRR2_plug | PF21188 | 119 - 184 | 3.2e-11 | Pre-mRNA-splicing helicase BRR2 plug domain |
| Helicase_PWI | PF18149 | 274 - 383 | 7e-35 | N-terminal helicase PWI domain |
| ResIII | PF04851 | 512 - 687 | 1.9e-13 | Type III restriction enzyme, res subunit |
| DEAD | PF00270 | 513 - 691 | 2.7e-32 | DEAD/DEAH box helicase |
| Helicase_C | PF00271 | 800 - 890 | 8.6e-10 | Helicase conserved C-terminal domain |
| WHD_SNRNP200 | PF23445 | 921 - 997 | 4e-24 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 1013 - 1292 | 7.9e-100 | Sec63 Brl domain |
| DEAD | PF00270 | 1335 - 1507 | 2.9e-32 | DEAD/DEAH box helicase |
| ResIII | PF04851 | 1335 - 1470 | 5.7e-13 | Type III restriction enzyme, res subunit |
| WHD_SNRNP200 | PF23445 | 1735 - 1816 | 3.2e-38 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 1822 - 2139 | 1.5e-71 | Sec63 Brl domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1701, 4379 |
| Acc16I | TGCGCA | 1 cut(s) | 4871 |
| Acc36I | ACCTGC | 4 cut(s) | 268, 1209, 2331, 4896 |
| AccB1I | GGYRCC | 1 cut(s) | 431 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 5011 |
| AccBSI | CCGCTC | 1 cut(s) | 241 |
| AccI | GTMKAC | 3 cut(s) | 1351, 3339, 4812 |
| AccII | CGCG | 2 cut(s) | 1054, 5153 |
| AclI | AACGTT | 1 cut(s) | 4189 |
| AcoI | YGGCCR | 6 cut(s) | 315, 406, 450, 1059, 2707, 5041 |
| AcsI | RAATTY | 4 cut(s) | 998, 1941, 3161, 4851 |
| AcvI | CACGTG | 1 cut(s) | 104 |
| AcyI | GRCGYC | 2 cut(s) | 432, 3361 |
| AdeI | CACNNNGTG | 1 cut(s) | 2569 |
| AfaI | GTAC | 9 cut(s) | 59, 1542, 2432, 2511, 2726, 3008, 4037, 5186, 5312 |
| AflII | CTTAAG | 4 cut(s) | 215, 458, 2099, 6029 |
| AflIII | ACRYGT | 3 cut(s) | 1052, 3432, 4729 |
| AjnI | CCWGG | 8 cut(s) | 356, 705, 3246, 4570, 4634, 5614, 5952, 5962 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2796, 2828, 3462, 3494 |
| AleI | CACNNNNGTG | 1 cut(s) | 168 |
| Alw21I | GWGCWC | 8 cut(s) | 204, 312, 930, 1052, 1600, 1635, 3376, 3627 |
| Alw26I | GTCTC | 9 cut(s) | 141, 1441, 1553, 1890, 2006, 2941, 4229, 4441, 5972 |
| Alw44I | GTGCAC | 1 cut(s) | 1048 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 400, 5740, 6052, 6446 |
| Ama87I | CYCGRG | 3 cut(s) | 70, 2298, 6323 |
| ApaLI | GTGCAC | 1 cut(s) | 1048 |
| ApoI | RAATTY | 4 cut(s) | 998, 1941, 3161, 4851 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1756, 2808, 3735, 5052, 6359 |
| AspLEI | GCGC | 7 cut(s) | 7, 34, 434, 1657, 4581, 4872, 5155 |
| AsuC2I | CCSGG | 5 cut(s) | 40, 176, 5045, 6133, 6348 |
| AsuNHI | GCTAGC | 3 cut(s) | 2363, 3202, 4541 |
| AvaI | CYCGRG | 3 cut(s) | 70, 2298, 6323 |
| AxyI | CCTNAGG | 1 cut(s) | 6209 |
| BaeGI | GKGCMC | 2 cut(s) | 1052, 2508 |
| BalI | TGGCCA | 3 cut(s) | 408, 1061, 2709 |
| BanI | GGYRCC | 1 cut(s) | 431 |
| BanII | GRGCYC | 9 cut(s) | 120, 204, 1504, 3258, 3376, 3409, 3627, 3804, 4133 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 5168, 5200 |
| BauI | CACGAG | 1 cut(s) | 113 |
| BbrPI | CACGTG | 1 cut(s) | 104 |
| BbsI | GAAGAC | 7 cut(s) | 196, 1077, 2361, 2671, 3356, 4091, 5555 |
| Bbv12I | GWGCWC | 8 cut(s) | 204, 312, 930, 1052, 1600, 1635, 3376, 3627 |
| BceAI | ACGGC | 6 cut(s) | 330, 437, 590, 2413, 4758, 4978 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 44, 61, 78, 95, 1262, 1296, 6314, 6348 |
| BciT130I | CCWGG | 8 cut(s) | 358, 707, 3248, 4572, 4636, 5616, 5954, 5964 |
| BciVI | GTATCC | 3 cut(s) | 2849, 3915, 6225 |
| BclI | TGATCA | 2 cut(s) | 538, 5377 |
| BcnI | CCSGG | 5 cut(s) | 40, 176, 5045, 6133, 6348 |
| BcoDI | GTCTC | 9 cut(s) | 141, 1441, 1553, 1890, 2006, 2941, 4229, 4441, 5972 |
| BfmI | CTRYAG | 4 cut(s) | 1109, 2235, 4809, 5912 |
| BfoI | RGCGCY | 1 cut(s) | 435 |
| BfrI | CTTAAG | 4 cut(s) | 215, 458, 2099, 6029 |
| BfuAI | ACCTGC | 4 cut(s) | 268, 1209, 2331, 4896 |
| BfuI | GTATCC | 3 cut(s) | 2849, 3915, 6225 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 371, 1160 |
| BglII | AGATCT | 2 cut(s) | 2419, 2589 |
| BlpI | GCTNAGC | 4 cut(s) | 380, 1503, 5408, 5837 |
| BmcAI | AGTACT | 1 cut(s) | 2726 |
| BmeT110I | CYCGRG | 3 cut(s) | 70, 2298, 6323 |
| BmrI | ACTGGG | 4 cut(s) | 1522, 3252, 4210, 4577 |
| BmtI | GCTAGC | 3 cut(s) | 2367, 3206, 4545 |
| BmuI | ACTGGG | 4 cut(s) | 1522, 3252, 4210, 4577 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3045 |
| BpiI | GAAGAC | 7 cut(s) | 196, 1077, 2361, 2671, 3356, 4091, 5555 |
| BpmI | CTGGAG | 4 cut(s) | 249, 615, 2908, 4293 |
| Bpu10I | CCTNAGC | 1 cut(s) | 4182 |
| Bpu1102I | GCTNAGC | 4 cut(s) | 380, 1503, 5408, 5837 |
| BpuEI | CTTGAG | 3 cut(s) | 3329, 4301, 5588 |
| BpuMI | CCSGG | 5 cut(s) | 40, 176, 5045, 6133, 6348 |
| BsaAI | YACGTR | 3 cut(s) | 104, 2509, 2885 |
| BsaBI | GATNNNNATC | 2 cut(s) | 3765, 4298 |
| BsaHI | GRCGYC | 2 cut(s) | 432, 3361 |
| BsaI | GGTCTC | 4 cut(s) | 1441, 1890, 2006, 4229 |
| BsaWI | WCCGGW | 3 cut(s) | 1899, 3232, 5313 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 4196, 4226, 4775, 4805 |
| Bse118I | RCCGGY | 3 cut(s) | 122, 1029, 1507 |
| Bse21I | CCTNAGG | 1 cut(s) | 6209 |
| Bse3DI | GCAATG | 4 cut(s) | 2413, 3051, 4653, 5833 |
| Bse8I | GATNNNNATC | 2 cut(s) | 3765, 4298 |
| BseBI | CCWGG | 8 cut(s) | 358, 707, 3248, 4572, 4636, 5616, 5954, 5964 |
| BseJI | GATNNNNATC | 2 cut(s) | 3765, 4298 |
| BseMI | GCAATG | 4 cut(s) | 2413, 3051, 4653, 5833 |
| BseRI | GAGGAG | 5 cut(s) | 698, 1112, 1940, 2957, 5948 |
| BseSI | GKGCMC | 2 cut(s) | 1052, 2508 |
| BseYI | CCCAGC | 4 cut(s) | 400, 1403, 4943, 4983 |
| BsgI | GTGCAG | 6 cut(s) | 2301, 2679, 3375, 3611, 4050, 4116 |
| Bsh1236I | CGCG | 2 cut(s) | 1054, 5153 |
| BshNI | GGYRCC | 1 cut(s) | 431 |
| BsiHKAI | GWGCWC | 8 cut(s) | 204, 312, 930, 1052, 1600, 1635, 3376, 3627 |
| BsiHKCI | CYCGRG | 3 cut(s) | 70, 2298, 6323 |
| BsiWI | CGTACG | 1 cut(s) | 2430 |
| BslFI | GGGAC | 9 cut(s) | 257, 1262, 2121, 2126, 2596, 3838, 4401, 5906, 5912 |
| BsmAI | GTCTC | 9 cut(s) | 141, 1441, 1553, 1890, 2006, 2941, 4229, 4441, 5972 |
| BsmBI | CGTCTC | 1 cut(s) | 2941 |
| BsmFI | GGGAC | 9 cut(s) | 257, 1262, 2121, 2126, 2596, 3838, 4401, 5906, 5912 |
| BsmI | GAATGC | 4 cut(s) | 256, 484, 5192, 5245 |
| Bso31I | GGTCTC | 4 cut(s) | 1441, 1890, 2006, 4229 |
| BsoBI | CYCGRG | 3 cut(s) | 70, 2298, 6323 |
| Bsp1407I | TGTACA | 1 cut(s) | 4035 |
| Bsp1720I | GCTNAGC | 4 cut(s) | 380, 1503, 5408, 5837 |
| Bsp19I | CCATGG | 1 cut(s) | 5856 |
| BspFNI | CGCG | 2 cut(s) | 1054, 5153 |
| BspHI | TCATGA | 3 cut(s) | 295, 3727, 4965 |
| BspMAI | CTGCAG | 1 cut(s) | 1113 |
| BspMI | ACCTGC | 4 cut(s) | 268, 1209, 2331, 4896 |
| BspOI | GCTAGC | 3 cut(s) | 2367, 3206, 4545 |
| BspQI | GCTCTTC | 1 cut(s) | 3246 |
| BspT107I | GGYRCC | 1 cut(s) | 431 |
| BspTI | CTTAAG | 4 cut(s) | 215, 458, 2099, 6029 |
| BspTNI | GGTCTC | 4 cut(s) | 1441, 1890, 2006, 4229 |
| BsrBI | CCGCTC | 1 cut(s) | 241 |
| BsrDI | GCAATG | 4 cut(s) | 2413, 3051, 4653, 5833 |
| BsrFI | RCCGGY | 3 cut(s) | 122, 1029, 1507 |
| BsrGI | TGTACA | 1 cut(s) | 4035 |
| BssAI | RCCGGY | 3 cut(s) | 122, 1029, 1507 |
| BssNI | GRCGYC | 2 cut(s) | 432, 3361 |
| BssSI | CACGAG | 1 cut(s) | 113 |
| BssT1I | CCWWGG | 6 cut(s) | 348, 2325, 2335, 5856, 6219, 6312 |
| Bst2BI | CACGAG | 1 cut(s) | 113 |
| Bst2UI | CCWGG | 8 cut(s) | 358, 707, 3248, 4572, 4636, 5616, 5954, 5964 |
| BstACI | GRCGYC | 2 cut(s) | 432, 3361 |
| BstAFI | CTTAAG | 4 cut(s) | 215, 458, 2099, 6029 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2537, 4103 |
| BstAUI | TGTACA | 1 cut(s) | 4035 |
| BstBAI | YACGTR | 3 cut(s) | 104, 2509, 2885 |
| BstDSI | CCRYGG | 2 cut(s) | 606, 5856 |
| BstEII | GGTNACC | 3 cut(s) | 170, 1805, 5747 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2102 |
| BstFNI | CGCG | 2 cut(s) | 1054, 5153 |
| BstH2I | RGCGCY | 1 cut(s) | 435 |
| BstHHI | GCGC | 7 cut(s) | 7, 34, 434, 1657, 4581, 4872, 5155 |
| BstMAI | GTCTC | 9 cut(s) | 141, 1441, 1553, 1890, 2006, 2941, 4229, 4441, 5972 |
| BstNI | CCWGG | 8 cut(s) | 358, 707, 3248, 4572, 4636, 5616, 5954, 5964 |
| BstNSI | RCATGY | 7 cut(s) | 1154, 2881, 3436, 4358, 4685, 4733, 5890 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3045 |
| BstPI | GGTNACC | 3 cut(s) | 170, 1805, 5747 |
| BstSFI | CTRYAG | 4 cut(s) | 1109, 2235, 4809, 5912 |
| BstSLI | GKGCMC | 2 cut(s) | 1052, 2508 |
| BstSNI | TACGTA | 1 cut(s) | 2885 |
| BstUI | CGCG | 2 cut(s) | 1054, 5153 |
| BstV2I | GAAGAC | 7 cut(s) | 196, 1077, 2361, 2671, 3356, 4091, 5555 |
| BstX2I | RGATCY | 7 cut(s) | 2419, 2488, 2589, 4519, 4615, 4750, 5686 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 976, 3491, 4317, 4400 |
| BstYI | RGATCY | 7 cut(s) | 2419, 2488, 2589, 4519, 4615, 4750, 5686 |
| Bsu36I | CCTNAGG | 1 cut(s) | 6209 |
| BsuI | GTATCC | 3 cut(s) | 2849, 3915, 6225 |
| BtgI | CCRYGG | 2 cut(s) | 606, 5856 |
| BtgZI | GCGATG | 1 cut(s) | 5819 |
| BtsI | GCAGTG | 3 cut(s) | 1635, 4665, 4879 |
| BveI | ACCTGC | 4 cut(s) | 268, 1209, 2331, 4896 |
| CaiI | CAGNNNCTG | 4 cut(s) | 400, 5740, 6052, 6446 |
| CciI | TCATGA | 3 cut(s) | 295, 3727, 4965 |
| CfoI | GCGC | 7 cut(s) | 7, 34, 434, 1657, 4581, 4872, 5155 |
| Cfr10I | RCCGGY | 3 cut(s) | 122, 1029, 1507 |
| CseI | GACGC | 2 cut(s) | 373, 3350 |
| Csp6I | GTAC | 9 cut(s) | 58, 1541, 2431, 2510, 2725, 3007, 4036, 5185, 5311 |
| CviQI | GTAC | 9 cut(s) | 58, 1541, 2431, 2510, 2725, 3007, 4036, 5185, 5311 |
| DinI | GGCGCC | 1 cut(s) | 433 |
| DraIII | CACNNNGTG | 1 cut(s) | 2569 |
| EaeI | YGGCCR | 6 cut(s) | 315, 406, 450, 1059, 2707, 5041 |
| EciI | GGCGGA | 1 cut(s) | 3798 |
| Ecl136II | GAGCTC | 3 cut(s) | 202, 3374, 3625 |
| Eco105I | TACGTA | 1 cut(s) | 2885 |
| Eco130I | CCWWGG | 6 cut(s) | 348, 2325, 2335, 5856, 6219, 6312 |
| Eco24I | GRGCYC | 9 cut(s) | 120, 204, 1504, 3258, 3376, 3409, 3627, 3804, 4133 |
| Eco31I | GGTCTC | 4 cut(s) | 1441, 1890, 2006, 4229 |
| Eco32I | GATATC | 2 cut(s) | 867, 1876 |
| Eco53kI | GAGCTC | 3 cut(s) | 202, 3374, 3625 |
| Eco72I | CACGTG | 1 cut(s) | 104 |
| Eco81I | CCTNAGG | 1 cut(s) | 6209 |
| Eco88I | CYCGRG | 3 cut(s) | 70, 2298, 6323 |
| Eco91I | GGTNACC | 3 cut(s) | 170, 1805, 5747 |
| EcoICRI | GAGCTC | 3 cut(s) | 202, 3374, 3625 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2102 |
| EcoO109I | RGGNCCY | 6 cut(s) | 244, 1264, 1967, 3852, 6194, 6443 |
| EcoO65I | GGTNACC | 3 cut(s) | 170, 1805, 5747 |
| EcoRII | CCWGG | 8 cut(s) | 356, 705, 3246, 4570, 4634, 5614, 5952, 5962 |
| EcoRV | GATATC | 2 cut(s) | 867, 1876 |
| EcoT14I | CCWWGG | 6 cut(s) | 348, 2325, 2335, 5856, 6219, 6312 |
| EcoT38I | GRGCYC | 9 cut(s) | 120, 204, 1504, 3258, 3376, 3409, 3627, 3804, 4133 |
| EgeI | GGCGCC | 1 cut(s) | 433 |
| EheI | GGCGCC | 1 cut(s) | 433 |
| ErhI | CCWWGG | 6 cut(s) | 348, 2325, 2335, 5856, 6219, 6312 |
| Esp3I | CGTCTC | 1 cut(s) | 2941 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 5165, 5197 |
| FaqI | GGGAC | 9 cut(s) | 257, 1262, 2121, 2126, 2596, 3838, 4401, 5906, 5912 |
| FauI | CCCGC | 3 cut(s) | 234, 1785, 4340 |
| FauNDI | CATATG | 1 cut(s) | 4091 |
| FbaI | TGATCA | 2 cut(s) | 538, 5377 |
| FblI | GTMKAC | 3 cut(s) | 1351, 3339, 4812 |
| FriOI | GRGCYC | 9 cut(s) | 120, 204, 1504, 3258, 3376, 3409, 3627, 3804, 4133 |
| FspI | TGCGCA | 1 cut(s) | 4871 |
| GlaI | GCGC | 7 cut(s) | 6, 33, 433, 1656, 4580, 4871, 5154 |
| GsaI | CCCAGC | 4 cut(s) | 404, 1407, 4947, 4987 |
| GsuI | CTGGAG | 4 cut(s) | 249, 615, 2908, 4293 |
| HaeII | RGCGCY | 1 cut(s) | 435 |
| HgaI | GACGC | 2 cut(s) | 373, 3350 |
| HhaI | GCGC | 7 cut(s) | 7, 34, 434, 1657, 4581, 4872, 5155 |
| Hin1I | GRCGYC | 2 cut(s) | 432, 3361 |
| Hin6I | GCGC | 7 cut(s) | 5, 32, 432, 1655, 4579, 4870, 5153 |
| HinP1I | GCGC | 7 cut(s) | 5, 32, 432, 1655, 4579, 4870, 5153 |
| HincII | GTYRAC | 5 cut(s) | 2095, 3324, 3448, 4463, 4497 |
| HindII | GTYRAC | 5 cut(s) | 2095, 3324, 3448, 4463, 4497 |
| HindIII | AAGCTT | 7 cut(s) | 212, 873, 911, 1469, 2838, 3209, 3305 |
| HpaI | GTTAAC | 1 cut(s) | 3448 |
| Hpy99I | CGWCG | 3 cut(s) | 719, 2234, 6455 |
| HpyCH4IV | ACGT | 5 cut(s) | 103, 2508, 2884, 4189, 6166 |
| HpySE526I | ACGT | 5 cut(s) | 103, 2508, 2884, 4189, 6166 |
| Hsp92I | GRCGYC | 2 cut(s) | 432, 3361 |
| HspAI | GCGC | 7 cut(s) | 5, 32, 432, 1655, 4579, 4870, 5153 |
| KasI | GGCGCC | 1 cut(s) | 431 |
| KflI | GGGWCCC | 2 cut(s) | 244, 3852 |
| KroI | GCCGGC | 1 cut(s) | 1507 |
| KroNI | GCCGGC | 1 cut(s) | 1509 |
| Ksp22I | TGATCA | 2 cut(s) | 538, 5377 |
| KspAI | GTTAAC | 1 cut(s) | 3448 |
| LguI | GCTCTTC | 1 cut(s) | 3246 |
| MaeII | ACGT | 5 cut(s) | 103, 2508, 2884, 4189, 6166 |
| MbiI | CCGCTC | 1 cut(s) | 241 |
| MfeI | CAATTG | 4 cut(s) | 552, 1134, 2845, 4671 |
| MflI | RGATCY | 7 cut(s) | 2419, 2488, 2589, 4519, 4615, 4750, 5686 |
| MlsI | TGGCCA | 3 cut(s) | 408, 1061, 2709 |
| MluI | ACGCGT | 1 cut(s) | 1052 |
| MluNI | TGGCCA | 3 cut(s) | 408, 1061, 2709 |
| Mly113I | GGCGCC | 1 cut(s) | 432 |
| MlyI | GAGTC | 8 cut(s) | 86, 143, 1560, 1813, 2578, 4468, 5872, 5894 |
| MmeI | TCCRAC | 3 cut(s) | 1729, 5739, 5982 |
| Mox20I | TGGCCA | 3 cut(s) | 408, 1061, 2709 |
| MroNI | GCCGGC | 1 cut(s) | 1507 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1756, 2808, 3735, 5052, 6359 |
| MscI | TGGCCA | 3 cut(s) | 408, 1061, 2709 |
| MslI | CAYNNNNRTG | 5 cut(s) | 168, 901, 3233, 3669, 6092 |
| Msp20I | TGGCCA | 3 cut(s) | 408, 1061, 2709 |
| MspA1I | CMGCKG | 9 cut(s) | 400, 437, 1147, 2972, 3301, 4338, 5365, 6049, 6459 |
| MspCI | CTTAAG | 4 cut(s) | 215, 458, 2099, 6029 |
| MunI | CAATTG | 4 cut(s) | 552, 1134, 2845, 4671 |
| Mva1269I | GAATGC | 4 cut(s) | 256, 484, 5192, 5245 |
| MvaI | CCWGG | 8 cut(s) | 358, 707, 3248, 4572, 4636, 5616, 5954, 5964 |
| MvnI | CGCG | 2 cut(s) | 1054, 5153 |
| NaeI | GCCGGC | 1 cut(s) | 1509 |
| NarI | GGCGCC | 1 cut(s) | 432 |
| NciI | CCSGG | 5 cut(s) | 40, 176, 5045, 6133, 6348 |
| NcoI | CCATGG | 1 cut(s) | 5856 |
| NdeI | CATATG | 1 cut(s) | 4091 |
| NgoMIV | GCCGGC | 1 cut(s) | 1507 |
| NheI | GCTAGC | 3 cut(s) | 2363, 3202, 4541 |
| NmeAIII | GCCGAG | 1 cut(s) | 2393 |
| NsbI | TGCGCA | 1 cut(s) | 4871 |
| NspI | RCATGY | 7 cut(s) | 1154, 2881, 3436, 4358, 4685, 4733, 5890 |
| OliI | CACNNNNGTG | 1 cut(s) | 168 |
| PaeI | GCATGC | 3 cut(s) | 1154, 2881, 4685 |
| PaeR7I | CTCGAG | 3 cut(s) | 70, 2298, 6323 |
| PagI | TCATGA | 3 cut(s) | 295, 3727, 4965 |
| PciI | ACATGT | 2 cut(s) | 3432, 4729 |
| PciSI | GCTCTTC | 1 cut(s) | 3246 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 723, 2881 |
| PctI | GAATGC | 4 cut(s) | 256, 484, 5192, 5245 |
| PdiI | GCCGGC | 1 cut(s) | 1509 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1756, 2808, 3735, 5052, 6359 |
| Pfl23II | CGTACG | 1 cut(s) | 2430 |
| PflFI | GACNNNGTC | 1 cut(s) | 4052 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 5011 |
| PfoI | TCCNGGA | 2 cut(s) | 705, 5962 |
| PleI | GAGTC | 8 cut(s) | 86, 142, 1559, 1813, 2578, 4467, 5872, 5894 |
| PluTI | GGCGCC | 1 cut(s) | 435 |
| PmaCI | CACGTG | 1 cut(s) | 104 |
| PmlI | CACGTG | 1 cut(s) | 104 |
| PpsI | GAGTC | 8 cut(s) | 86, 142, 1559, 1813, 2578, 4467, 5872, 5894 |
| Ppu21I | YACGTR | 3 cut(s) | 104, 2509, 2885 |
| PpuMI | RGGWCCY | 4 cut(s) | 244, 3852, 6194, 6443 |
| PscI | ACATGT | 2 cut(s) | 3432, 4729 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3045 |
| PsiI | TTATAA | 2 cut(s) | 1701, 4379 |
| Psp124BI | GAGCTC | 3 cut(s) | 204, 3376, 3627 |
| Psp1406I | AACGTT | 1 cut(s) | 4189 |
| Psp5II | RGGWCCY | 4 cut(s) | 244, 3852, 6194, 6443 |
| Psp6I | CCWGG | 8 cut(s) | 356, 705, 3246, 4570, 4634, 5614, 5952, 5962 |
| PspCI | CACGTG | 1 cut(s) | 104 |
| PspEI | GGTNACC | 3 cut(s) | 170, 1805, 5747 |
| PspFI | CCCAGC | 4 cut(s) | 400, 1403, 4943, 4983 |
| PspGI | CCWGG | 8 cut(s) | 356, 705, 3246, 4570, 4634, 5614, 5952, 5962 |
| PspLI | CGTACG | 1 cut(s) | 2430 |
| PspPPI | RGGWCCY | 4 cut(s) | 244, 3852, 6194, 6443 |
| PspXI | VCTCGAGB | 3 cut(s) | 70, 2298, 6323 |
| PstI | CTGCAG | 1 cut(s) | 1113 |
| PstNI | CAGNNNCTG | 4 cut(s) | 400, 5740, 6052, 6446 |
| PsuI | RGATCY | 7 cut(s) | 2419, 2488, 2589, 4519, 4615, 4750, 5686 |
| PsyI | GACNNNGTC | 1 cut(s) | 4052 |
| PvuII | CAGCTG | 4 cut(s) | 400, 1147, 3301, 6049 |
| RsaI | GTAC | 9 cut(s) | 59, 1542, 2432, 2511, 2726, 3008, 4037, 5186, 5312 |
| RsaNI | GTAC | 9 cut(s) | 58, 1541, 2431, 2510, 2725, 3007, 4036, 5185, 5311 |
| RseI | CAYNNNNRTG | 5 cut(s) | 168, 901, 3233, 3669, 6092 |
| SacI | GAGCTC | 3 cut(s) | 204, 3376, 3627 |
| SapI | GCTCTTC | 1 cut(s) | 3246 |
| ScaI | AGTACT | 1 cut(s) | 2726 |
| SchI | GAGTC | 8 cut(s) | 86, 143, 1560, 1813, 2578, 4468, 5872, 5894 |
| SfcI | CTRYAG | 4 cut(s) | 1109, 2235, 4809, 5912 |
| SfoI | GGCGCC | 1 cut(s) | 433 |
| Sfr274I | CTCGAG | 3 cut(s) | 70, 2298, 6323 |
| SgrAI | CRCCGGYG | 1 cut(s) | 122 |
| SlaI | CTCGAG | 3 cut(s) | 70, 2298, 6323 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 168, 901, 3233, 3669, 6092 |
| SnaBI | TACGTA | 1 cut(s) | 2885 |
| SphI | GCATGC | 3 cut(s) | 1154, 2881, 4685 |
| SspDI | GGCGCC | 1 cut(s) | 431 |
| SspI | AATATT | 1 cut(s) | 3734 |
| SstI | GAGCTC | 3 cut(s) | 204, 3376, 3627 |
| StyI | CCWWGG | 6 cut(s) | 348, 2325, 2335, 5856, 6219, 6312 |
| TaiI | ACGT | 5 cut(s) | 106, 2511, 2887, 4192, 6169 |
| TatI | WGTACW | 2 cut(s) | 2724, 4035 |
| TauI | GCSGC | 9 cut(s) | 21, 289, 292, 432, 437, 3184, 4338, 5368, 6462 |
| TspGWI | ACGGA | 2 cut(s) | 3954, 6319 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4052 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 5011 |
| Vha464I | CTTAAG | 4 cut(s) | 215, 458, 2099, 6029 |
| VneI | GTGCAC | 1 cut(s) | 1048 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2102 |
| XapI | RAATTY | 4 cut(s) | 998, 1941, 3161, 4851 |
| XbaI | TCTAGA | 1 cut(s) | 4439 |
| XceI | RCATGY | 7 cut(s) | 1154, 2881, 3436, 4358, 4685, 4733, 5890 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 3645, 4400, 5960 |
| XhoI | CTCGAG | 3 cut(s) | 70, 2298, 6323 |
| XmiI | GTMKAC | 3 cut(s) | 1351, 3339, 4812 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1756, 2808, 3735, 5052, 6359 |
| ZrmI | AGTACT | 1 cut(s) | 2726 |