Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0000802

Physical Location & Seq

Genomic Coordinates Reverse (-)

8854273 .. 8857207

Gene Structure 2935 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0113200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGGTTAATTTTCCTGAATTGAAAATGGCATCAAGTGAGGGATTTTTGACGAATGAGCAGAGGGAAACATTAAAAGTTGCCTGCCAAAATGTGGAGGTTCTGTCATCGTCGCCAAAGTCCCCTACATCTTTCCTGTCTGAACATCATGTAAAAGCCCCTGCTGGTGGTAAGGCTCCAACTGCTGGGATAGCTGTGAGGCATGTGCGTCGGACACACTCAGGGAAGATTGTGCGGGTTAAAAAGGAAGGAGGAGGTGGCAAGGGCACATGGGGAAAGCTGCTTGATACTGATGGTGAATCCCATATTGATCGTAATGACCCTAACTATGACAGTGGGGAGGAACCATACCAACTTGTTGGGGCAACTGTAGCGGATCCGTTGGATGAATACAAGAAAACTGTCGCTTCCATCATTGAGGAATACTTCAGCACTGATGATGTGGGACAGGCAGCATCTGACCTCAGAGAACTAAGCTCAAGTCAGTATCATCCTTACTTCATTAAGCGCCTTGTTTCCATGGCAATGGACAGGCATGATAAGGAGAAAGAGATGGCCTCAGTTTTGCTCTCAGCTTTGTATGCTGATGTCATCAGTCCTGCGCAGATTCAAGATGGATTTTATATACTTCTTGATTCTGCTGATGACCTTGCAGTGGACATACTGGATGCAGTAGACATTCTTGCCTTGTTTCTTGCTCGTGCAGTGGTTGATGACATCCTTCCTCCGGCCTTCCTAACAAGGGCAAAGAAAGCACTCCCTGAATCGTCCAAGGGAGTTCAGGTAATTCAGACTGCAGAGAAGAGCTATCTTTCAGCTCCACACCATGCAGAACTTGTGGAGAGGAGGTGGGGCGGTAGCACTCACATAACTGTTGAAGAGGTGAAGAAAAAGATTTCTGATTTGTTGAGAGAATATGTGGAAAGTGGAGACACTCTTGAGGCCTGTAGGTGCATTAGGGAGTTGGGAGTTTCGTTCTATCATCATGAGGTTGTGAAAAGAGCTTTGATTATTGGCATGGAGACTCAGACAACTGAACCACTAATAACGAAGCTATTAAAGGAGGCGGCTGAGGAAGGCATTATTAGTTCCAGTCAGATGGCAAAGGGCTTTTCTCGTTTGGCAGAGAGCCTCGATGACCTTTCTCTTGACATTCCATCAGCAAAAACCTTGTTCCAGTCGCTGGTCCCCAAGGCAATATCTGAAGGTTGGCTTGATGATTCGTTTGTGGAATCCTTAGGTGAAGACGGTGAGGTGCAAGATGGAGATGAAAAGGTGAGGCAGTACAAGAAAGAGATTGTGTCCATAATTCACGAATACTTTCTCTCGGATGATATTCCCGAGCTCATTCAAAGCCTTGAAGATCTTGCGGTACCTGAGTATAATCCCATATTCTTGAAGAAGCTGATCACACTTGCAATGGATAGAAAGAACCGGGAAAAGGAAATGGCATCTGTTCTGCTTTCTGCCCTTCATATTGAGATCTTCTCGACTGAGGACATAGTTAATGGATTTGTCTTGCTTCTGGAATCTGCAGAGGACACGGAATTGGACATCTTGGATGCTTCAAATGAGCTTGCTCTCTTTCTGGCCAGGGCTGTGATCGATGATGTGTTGGCTCCGCTGAATTTGGAAGAAATTGGCAGCAGGTTGCCACCGAATTGCAGCGCAACTGAGACTGTGCGAATGGCTCAGTCACTGGTTTCTGCTCGTCATGCTGGTGAGAGGCTCCTGAGATGTTGGGGAGGTGGGACTGGCTGGATTGTGGAGGATGCAAAGGACAAGATCACAAAGCTCTTAGAGGAGTATGAAAGTGGGGGTGTCGTGGCTGAAGCCTGCCAGTGCATTCGTGATATCGGAATGCCTTTCTTTAACCATGAGGTGGTGAAGAAGGCGCTGGTTATGGCAATGGAGAAGAAGAATGACAGTATGCTGGATCTGCTTCAGGAGTGCTTCAGCGAAGGACTGATCACAATCAACCAGCTGACCAAAGGCTTCACCCGGATCAAGGAAGGGCTAGATGACTTGGCTCTCGACATTCCAAATGCAAGGGAGAAGTTTAGCTTCTACGTGGAGCACGCACAAGAGAAGGGTTGGCTTTTGCCGACCTTTGGTTCATCTGCCGCGGATGGTTGTCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000354 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005682 GO:0005911 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009506 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022613 GO:0022618 GO:0030054 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0042623 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0046540 GO:0055044 GO:0065003 GO:0070013 GO:0070035 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0097526 GO:0120114 GO:0140098 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD Helicase_C Sec63

Protein Analysis

712

Amino Acids

78.66

Weight (kDa)

4.85

Isoelectric Point (pI)

45.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MA3	PF02847	131 - 241	7.3e-28	MA3 domain
MA3	PF02847	294 - 405	7.3e-32	MA3 domain
MA3	PF02847	429 - 538	1.6e-27	MA3 domain
MA3	PF02847	592 - 699	1.1e-31	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000802)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20960 AT1G20960 AT2G42270
fragaria_vesca	FvH4_5g21940 FvH4_5g30070 FvH4_6g00860 FvH4_6g00860 FvH4_6g47200
malus_domestica	MD04G1240400.v1.1 MD09G1062900.v1.1 MD09G1063000.v1.1 MD12G1257300.v1.1
prunus_persica	Prupe.6G358100_v2.0.a1 Prupe.6G358100_v2.0.a1
pyrus_communis	pycom04g21210 pycom04g21230 pycom111g05330 pycom12g23600 pycom12g23620
rosa_chinensis	RchiOBHm_Chr2g0166221 RchiOBHm_Chr3g0448041 RchiOBHm_Chr3g0448351 RchiOBHm_Chr5g0014801 RchiOBHm_Chr7g0209461
rosa_laevigata	RLG00000003133 RLG00000021598 RLG00000021599 RLG00000025925 RLG00000025950 RLG00000025953 RLG00000032142
rosa_multiflora	Rmu_co8520521.1_g000001 Rmu_sc0005582.1_g000009 Rmu_sc0005969.1_g000018 Rmu_sc0015167.1_g000007 Rmu_ssc0000323.1_g000031
rosa_roxburghii	Rroxscaffold_1G00061750 Rroxscaffold_2G00085080 Rroxscaffold_3G00249430 Rroxscaffold_6G00426200 Rroxscaffold_6G00426480 Rroxscaffold_6G00426530
rosa_rugosa	Rorug02G0521300 Rorug02G0607900 Rorug02G0611500 Rorug02G0611600 Rorug07G0113200
rosa_samantha	Rh2AG587300 Rh2BG599200 Rh2CG569600 Rh2DG608900 Rh3AG010500 Rh3AG010600 Rh3BG010200 Rh3BG010300 Rh3CG009900 Rh3CG010000 Rh3DG010600 Rh3DG010700 Rh5CG124900 Rh7AG247100 Rh7BG242100 Rh7CG262700 Rh7DG253400
rosa_wichuraiana	Rw0G020040 Rw2G048960 Rw3G000580 Rw3G000830 Rw7G020900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	600
Acc36I	ACCTGC	1 cut(s)	1635
Acc65I	GGTACC	1 cut(s)	1369
AccB1I	GGYRCC	1 cut(s)	1369
AccB7I	CCANNNNNTGG	4 cut(s)	91, 182, 1180, 1879
AccI	GTMKAC	1 cut(s)	672
AccII	CGCG	1 cut(s)	2123
AciI	CCGC	8 cut(s)	232, 371, 852, 1064, 1367, 1619, 2121, 2123
AclWI	GGATC	4 cut(s)	368, 381, 1941, 2009
AcoI	YGGCCR	1 cut(s)	1587
AcsI	RAATTY	1 cut(s)	1624
AcuI	CTGAAG	5 cut(s)	409, 1221, 1848, 1925, 1936
AfaI	GTAC	2 cut(s)	1283, 1371
AgsI	TTSAA	7 cut(s)	22, 608, 875, 1349, 1358, 1396, 1566
AjnI	CCWGG	1 cut(s)	1589
Alw21I	GWGCWC	2 cut(s)	1344, 2076
Alw26I	GTCTC	3 cut(s)	921, 1013, 1667
AlwI	GGATC	4 cut(s)	368, 381, 1941, 2009
AlwNI	CAGNNNCTG	3 cut(s)	455, 1180, 1696
Ama87I	CYCGRG	1 cut(s)	1337
AoxI	GGCC	4 cut(s)	552, 726, 939, 1587
ApeKI	GCWGC	4 cut(s)	277, 449, 1641, 1662
ApoI	RAATTY	1 cut(s)	1624
Asp700I	GAANNNNTTC	1 cut(s)	1317
Asp718I	GGTACC	1 cut(s)	1369
AspLEI	GCGC	4 cut(s)	507, 601, 1667, 1894
AspS9I	GGNCC	1 cut(s)	1183
AsuC2I	CCSGG	2 cut(s)	1433, 1999
AsuHPI	GGTGA	8 cut(s)	305, 892, 1250, 1259, 1285, 1730, 1894, 1987
AvaI	CYCGRG	1 cut(s)	1337
AvaII	GGWCC	1 cut(s)	1183
AxyI	CCTNAGG	1 cut(s)	1234
BaeGI	GKGCMC	1 cut(s)	266
BaeI	ACNNNNGTAYC	2 cut(s)	1361, 1394
BalI	TGGCCA	1 cut(s)	1589
BamHI	GGATCC	1 cut(s)	373
BanI	GGYRCC	1 cut(s)	1369
BanII	GRGCYC	1 cut(s)	1344
BauI	CACGAG	1 cut(s)	696
BbsI	GAAGAC	1 cut(s)	1248
Bbv12I	GWGCWC	2 cut(s)	1344, 2076
BbvCI	CCTCAGC	1 cut(s)	1068
BbvI	GCAGC	4 cut(s)	264, 461, 1653, 1674
BccI	CCATC	8 cut(s)	284, 416, 544, 605, 1090, 1162, 1253, 2120
BcgI	CGANNNNNNTGC	2 cut(s)	188, 222
BciT130I	CCWGG	1 cut(s)	1591
BclI	TGATCA	2 cut(s)	1404, 1965
BcnI	CCSGG	2 cut(s)	1433, 1999
BcoDI	GTCTC	3 cut(s)	921, 1013, 1667
BfaI	CTAG	1 cut(s)	2015
BfmI	CTRYAG	4 cut(s)	366, 792, 943, 1530
BfoI	RGCGCY	2 cut(s)	508, 1895
BfuAI	ACCTGC	1 cut(s)	1635
BglII	AGATCT	2 cut(s)	1360, 1479
BisI	GCNGC	6 cut(s)	278, 450, 1065, 1642, 1663, 2121
BlsI	GCNGC	6 cut(s)	279, 451, 1066, 1643, 1664, 2122
Bme1390I	CCNGG	3 cut(s)	1433, 1591, 1999
Bme18I	GGWCC	1 cut(s)	1183
BmeT110I	CYCGRG	1 cut(s)	1337
BmgT120I	GGNCC	1 cut(s)	1183
BmiI	GGNNCC	7 cut(s)	174, 342, 375, 1185, 1371, 1617, 1727
BmrFI	CCNGG	3 cut(s)	1433, 1591, 1999
BmsI	GCATC	6 cut(s)	38, 461, 655, 1457, 1549, 1759
BpiI	GAAGAC	1 cut(s)	1248
BplI	GAGNNNNNCTC	4 cut(s)	539, 571, 1469, 1501
Bpu10I	CCTNAGC	1 cut(s)	1068
BpuEI	CTTGAG	2 cut(s)	460, 956
BpuMI	CCSGG	2 cut(s)	1433, 1999
Bsa29I	ATCGAT	1 cut(s)	1602
BsaAI	YACGTR	1 cut(s)	2068
BsaBI	GATNNNNATC	1 cut(s)	1970
BsaJI	CCNNGG	5 cut(s)	516, 768, 1188, 1590, 2121
BsaXI	ACNNNNNCTCC	6 cut(s)	86, 116, 765, 795, 830, 860
Bse1I	ACTGG	6 cut(s)	666, 1089, 1174, 1701, 1756, 1837
Bse21I	CCTNAGG	1 cut(s)	1234
Bse3DI	GCAATG	3 cut(s)	528, 1422, 1911
Bse8I	GATNNNNATC	1 cut(s)	1970
BseBI	CCWGG	1 cut(s)	1591
BseCI	ATCGAT	1 cut(s)	1602
BseDI	CCNNGG	5 cut(s)	516, 768, 1188, 1590, 2121
BseGI	GGATG	8 cut(s)	388, 487, 670, 714, 1333, 1564, 1774, 2131
BseJI	GATNNNNATC	1 cut(s)	1970
BseMI	GCAATG	3 cut(s)	528, 1422, 1911
BseNI	ACTGG	6 cut(s)	666, 1089, 1174, 1701, 1756, 1837
BseRI	GAGGAG	3 cut(s)	264, 856, 1814
BseSI	GKGCMC	1 cut(s)	266
BseXI	GCAGC	4 cut(s)	264, 461, 1653, 1674
BseYI	CCCAGC	1 cut(s)	182
BsgI	GTGCAG	1 cut(s)	720
Bsh1236I	CGCG	1 cut(s)	2123
BshFI	GGCC	4 cut(s)	554, 728, 941, 1589
BshNI	GGYRCC	1 cut(s)	1369
BshVI	ATCGAT	1 cut(s)	1602
BsiHKAI	GWGCWC	2 cut(s)	1344, 2076
BsiHKCI	CYCGRG	1 cut(s)	1337
BsiSI	CCGG	3 cut(s)	725, 1432, 1999
BslFI	GGGAC	4 cut(s)	103, 456, 1169, 1762
BsmAI	GTCTC	3 cut(s)	921, 1013, 1667
BsmFI	GGGAC	4 cut(s)	103, 456, 1169, 1762
BsmI	GAATGC	2 cut(s)	1842, 1863
BsnI	GGCC	4 cut(s)	554, 728, 941, 1589
BsoBI	CYCGRG	1 cut(s)	1337
Bsp1286I	GDGCHC	3 cut(s)	266, 1344, 2076
Bsp19I	CCATGG	1 cut(s)	516
BspACI	CCGC	8 cut(s)	232, 371, 852, 1064, 1367, 1619, 2121, 2123
BspANI	GGCC	4 cut(s)	554, 728, 941, 1589
BspDI	ATCGAT	1 cut(s)	1602
BspFNI	CGCG	1 cut(s)	2123
BspHI	TCATGA	1 cut(s)	982
BspLI	GGNNCC	7 cut(s)	174, 342, 375, 1185, 1371, 1617, 1727
BspMAI	CTGCAG	2 cut(s)	796, 1534
BspMI	ACCTGC	1 cut(s)	1635
BspPI	GGATC	4 cut(s)	368, 381, 1941, 2009
BspQI	GCTCTTC	1 cut(s)	794
BspT107I	GGYRCC	1 cut(s)	1369
BsrDI	GCAATG	3 cut(s)	528, 1422, 1911
BsrI	ACTGG	6 cut(s)	666, 1089, 1174, 1701, 1756, 1837
BssECI	CCNNGG	5 cut(s)	516, 768, 1188, 1590, 2121
BssSI	CACGAG	1 cut(s)	696
BssT1I	CCWWGG	3 cut(s)	516, 768, 1188
Bst2BI	CACGAG	1 cut(s)	696
Bst2UI	CCWGG	1 cut(s)	1591
Bst4CI	ACNGT	7 cut(s)	332, 367, 400, 871, 1247, 1678, 1925
Bst6I	CTCTTC	2 cut(s)	794, 870
BstBAI	YACGTR	1 cut(s)	2068
BstC8I	GCNNGC	4 cut(s)	82, 1575, 1834, 2076
BstDSI	CCRYGG	2 cut(s)	516, 2121
BstF5I	GGATG	8 cut(s)	388, 487, 670, 714, 1333, 1564, 1774, 2131
BstFNI	CGCG	1 cut(s)	2123
BstH2I	RGCGCY	2 cut(s)	508, 1895
BstHHI	GCGC	4 cut(s)	507, 601, 1667, 1894
BstMAI	GTCTC	3 cut(s)	921, 1013, 1667
BstMWI	GCNNNNNNNGC	7 cut(s)	179, 188, 368, 578, 749, 1712, 1936
BstNI	CCWGG	1 cut(s)	1591
BstNSI	RCATGY	1 cut(s)	203
BstSCI	CCNGG	3 cut(s)	1431, 1589, 1997
BstSFI	CTRYAG	4 cut(s)	366, 792, 943, 1530
BstSLI	GKGCMC	1 cut(s)	266
BstUI	CGCG	1 cut(s)	2123
BstV1I	GCAGC	4 cut(s)	264, 461, 1653, 1674
BstV2I	GAAGAC	1 cut(s)	1248
BstX2I	RGATCY	4 cut(s)	373, 1360, 1479, 1933
BstXI	CCANNNNNNTGG	3 cut(s)	356, 523, 1096
BstYI	RGATCY	4 cut(s)	373, 1360, 1479, 1933
Bsu15I	ATCGAT	1 cut(s)	1602
Bsu36I	CCTNAGG	1 cut(s)	1234
BsuRI	GGCC	4 cut(s)	554, 728, 941, 1589
BsuTUI	ATCGAT	1 cut(s)	1602
BtgI	CCRYGG	2 cut(s)	516, 2121
BtsCI	GGATG	8 cut(s)	388, 487, 670, 714, 1333, 1564, 1774, 2131
BtsI	GCAGTG	2 cut(s)	657, 708
BtsIMutI	CAGTG	7 cut(s)	337, 429, 657, 708, 1694, 1844, 2134
BveI	ACCTGC	1 cut(s)	1635
Cac8I	GCNNGC	4 cut(s)	82, 1575, 1834, 2076
CaiI	CAGNNNCTG	3 cut(s)	455, 1180, 1696
CciI	TCATGA	1 cut(s)	982
CfoI	GCGC	4 cut(s)	507, 601, 1667, 1894
Cfr13I	GGNCC	1 cut(s)	1183
Cfr42I	CCGCGG	1 cut(s)	2124
ClaI	ATCGAT	1 cut(s)	1602
CseI	GACGC	1 cut(s)	194
Csp6I	GTAC	2 cut(s)	1282, 1370
CviQI	GTAC	2 cut(s)	1282, 1370
EaeI	YGGCCR	1 cut(s)	1587
Eam1104I	CTCTTC	2 cut(s)	794, 870
EarI	CTCTTC	2 cut(s)	794, 870
Ecl136II	GAGCTC	1 cut(s)	1342
Eco130I	CCWWGG	3 cut(s)	516, 768, 1188
Eco147I	AGGCCT	1 cut(s)	941
Eco24I	GRGCYC	1 cut(s)	1344
Eco32I	GATATC	1 cut(s)	1852
Eco47I	GGWCC	1 cut(s)	1183
Eco53kI	GAGCTC	1 cut(s)	1342
Eco57I	CTGAAG	5 cut(s)	409, 1221, 1848, 1925, 1936
Eco81I	CCTNAGG	1 cut(s)	1234
Eco88I	CYCGRG	1 cut(s)	1337
EcoICRI	GAGCTC	1 cut(s)	1342
EcoRII	CCWGG	1 cut(s)	1589
EcoRV	GATATC	1 cut(s)	1852
EcoT14I	CCWWGG	3 cut(s)	516, 768, 1188
EcoT38I	GRGCYC	1 cut(s)	1344
ErhI	CCWWGG	3 cut(s)	516, 768, 1188
FalI	AAGNNNNNCTT	4 cut(s)	1194, 1226, 2045, 2077
FaqI	GGGAC	4 cut(s)	103, 456, 1169, 1762
FauI	CCCGC	1 cut(s)	225
FbaI	TGATCA	2 cut(s)	1404, 1965
FblI	GTMKAC	1 cut(s)	672
Fnu4HI	GCNGC	6 cut(s)	278, 450, 1065, 1642, 1663, 2121
FokI	GGATG	7 cut(s)	395, 474, 677, 701, 1340, 1571, 1781
FriOI	GRGCYC	1 cut(s)	1344
Fsp4HI	GCNGC	6 cut(s)	278, 450, 1065, 1642, 1663, 2121
FspBI	CTAG	1 cut(s)	2015
FspI	TGCGCA	1 cut(s)	600
GlaI	GCGC	4 cut(s)	506, 600, 1666, 1893
GluI	GCNGC	6 cut(s)	278, 450, 1065, 1642, 1663, 2121
GsaI	CCCAGC	1 cut(s)	186
HaeII	RGCGCY	2 cut(s)	508, 1895
HaeIII	GGCC	4 cut(s)	554, 728, 941, 1589
HapII	CCGG	3 cut(s)	725, 1432, 1999
HgaI	GACGC	1 cut(s)	194
HhaI	GCGC	4 cut(s)	507, 601, 1667, 1894
Hin6I	GCGC	4 cut(s)	505, 599, 1665, 1892
HinP1I	GCGC	4 cut(s)	505, 599, 1665, 1892
HinfI	GANTC	8 cut(s)	296, 604, 632, 761, 1021, 1217, 1229, 1526
HpaII	CCGG	3 cut(s)	725, 1432, 1999
HphI	GGTGA	8 cut(s)	305, 892, 1250, 1259, 1285, 1730, 1894, 1987
Hpy166II	GTNNAC	2 cut(s)	655, 673
Hpy8I	GTNNAC	2 cut(s)	655, 673
Hpy99I	CGWCG	2 cut(s)	112, 210
HpyCH4III	ACNGT	7 cut(s)	332, 367, 400, 871, 1247, 1678, 1925
HpyCH4IV	ACGT	1 cut(s)	2067
HpyF10VI	GCNNNNNNNGC	7 cut(s)	179, 188, 368, 578, 749, 1712, 1936
HpySE526I	ACGT	1 cut(s)	2067
HspAI	GCGC	4 cut(s)	505, 599, 1665, 1892
KpnI	GGTACC	1 cut(s)	1373
Ksp22I	TGATCA	2 cut(s)	1404, 1965
KspI	CCGCGG	1 cut(s)	2124
LguI	GCTCTTC	1 cut(s)	794
LmnI	GCTCC	5 cut(s)	178, 820, 1621, 1731, 2071
Lsp1109I	GCAGC	4 cut(s)	264, 461, 1653, 1674
LweI	GCATC	6 cut(s)	38, 461, 655, 1457, 1549, 1759
MaeI	CTAG	1 cut(s)	2015
MaeII	ACGT	1 cut(s)	2067
MaeIII	GTNAC	2 cut(s)	1692, 2132
MflI	RGATCY	4 cut(s)	373, 1360, 1479, 1933
MhlI	GDGCHC	3 cut(s)	266, 1344, 2076
MlsI	TGGCCA	1 cut(s)	1589
MluCI	AATT	8 cut(s)	7, 17, 783, 1305, 1544, 1624, 1635, 1657
MluNI	TGGCCA	1 cut(s)	1589
MlyI	GAGTC	1 cut(s)	1015
MmeI	TCCRAC	3 cut(s)	188, 200, 360
Mox20I	TGGCCA	1 cut(s)	1589
MroXI	GAANNNNTTC	1 cut(s)	1317
MscI	TGGCCA	1 cut(s)	1589
MseI	TTAA	7 cut(s)	6, 71, 237, 501, 1055, 1503, 1869
MslI	CAYNNNNRTG	2 cut(s)	521, 1716
Msp20I	TGGCCA	1 cut(s)	1589
MspA1I	CMGCKG	3 cut(s)	1621, 1981, 2123
MspI	CCGG	3 cut(s)	725, 1432, 1999
MspR9I	CCNGG	3 cut(s)	1433, 1591, 1999
Mva1269I	GAATGC	2 cut(s)	1842, 1863
MvaI	CCWGG	1 cut(s)	1591
MvnI	CGCG	1 cut(s)	2123
MwoI	GCNNNNNNNGC	7 cut(s)	179, 188, 368, 578, 749, 1712, 1936
NciI	CCSGG	2 cut(s)	1433, 1999
NcoI	CCATGG	1 cut(s)	516
NlaIV	GGNNCC	7 cut(s)	174, 342, 375, 1185, 1371, 1617, 1727
NmuCI	GTSAC	2 cut(s)	1692, 2132
NsbI	TGCGCA	1 cut(s)	600
NspI	RCATGY	1 cut(s)	203
PagI	TCATGA	1 cut(s)	982
PceI	AGGCCT	1 cut(s)	941
PciSI	GCTCTTC	1 cut(s)	794
PctI	GAATGC	2 cut(s)	1842, 1863
PdmI	GAANNNNTTC	1 cut(s)	1317
PfeI	GAWTC	7 cut(s)	296, 604, 632, 761, 1217, 1229, 1526
PflMI	CCANNNNNTGG	4 cut(s)	91, 182, 1180, 1879
PkrI	GCNGC	6 cut(s)	279, 451, 1066, 1643, 1664, 2122
PleI	GAGTC	1 cut(s)	1015
PpsI	GAGTC	1 cut(s)	1015
Ppu21I	YACGTR	1 cut(s)	2068
Psp124BI	GAGCTC	1 cut(s)	1344
Psp6I	CCWGG	1 cut(s)	1589
PspFI	CCCAGC	1 cut(s)	182
PspGI	CCWGG	1 cut(s)	1589
PspN4I	GGNNCC	7 cut(s)	174, 342, 375, 1185, 1371, 1617, 1727
PspPI	GGNCC	1 cut(s)	1183
PstI	CTGCAG	2 cut(s)	796, 1534
PstNI	CAGNNNCTG	3 cut(s)	455, 1180, 1696
PsuI	RGATCY	4 cut(s)	373, 1360, 1479, 1933
PvuII	CAGCTG	1 cut(s)	1981
RsaI	GTAC	2 cut(s)	1283, 1371
RsaNI	GTAC	2 cut(s)	1282, 1370
RseI	CAYNNNNRTG	2 cut(s)	521, 1716
SacI	GAGCTC	1 cut(s)	1344
SacII	CCGCGG	1 cut(s)	2124
SapI	GCTCTTC	1 cut(s)	794
SaqAI	TTAA	7 cut(s)	6, 71, 237, 501, 1055, 1503, 1869
SatI	GCNGC	6 cut(s)	278, 450, 1065, 1642, 1663, 2121
Sau96I	GGNCC	1 cut(s)	1183
SchI	GAGTC	1 cut(s)	1015
ScrFI	CCNGG	3 cut(s)	1433, 1591, 1999
SduI	GDGCHC	3 cut(s)	266, 1344, 2076
SfaNI	GCATC	6 cut(s)	38, 461, 655, 1457, 1549, 1759
SfcI	CTRYAG	4 cut(s)	366, 792, 943, 1530
Sfr303I	CCGCGG	1 cut(s)	2124
SgrBI	CCGCGG	1 cut(s)	2124
SinI	GGWCC	1 cut(s)	1183
SmiMI	CAYNNNNRTG	2 cut(s)	521, 1716
SmlI	CTYRAG	2 cut(s)	475, 935
SmoI	CTYRAG	2 cut(s)	475, 935
Sse9I	AATT	8 cut(s)	7, 17, 783, 1305, 1544, 1624, 1635, 1657
SseBI	AGGCCT	1 cut(s)	941
SsiI	CCGC	8 cut(s)	232, 371, 852, 1064, 1367, 1619, 2121, 2123
SspMI	CTAG	1 cut(s)	2015
SstI	GAGCTC	1 cut(s)	1344
StuI	AGGCCT	1 cut(s)	941
StyD4I	CCNGG	3 cut(s)	1431, 1589, 1997
StyI	CCWWGG	3 cut(s)	516, 768, 1188
TaaI	ACNGT	7 cut(s)	332, 367, 400, 871, 1247, 1678, 1925
TaiI	ACGT	1 cut(s)	2070
TaqI	TCGA	4 cut(s)	1131, 1487, 1602, 2031
TasI	AATT	8 cut(s)	7, 17, 783, 1305, 1544, 1624, 1635, 1657
TatI	WGTACW	1 cut(s)	1281
TauI	GCSGC	2 cut(s)	1067, 2123
TfiI	GAWTC	7 cut(s)	296, 604, 632, 761, 1217, 1229, 1526
Tru1I	TTAA	7 cut(s)	6, 71, 237, 501, 1055, 1503, 1869
Tru9I	TTAA	7 cut(s)	6, 71, 237, 501, 1055, 1503, 1869
TscAI	CASTG	6 cut(s)	337, 436, 657, 708, 1701, 1844
TseFI	GTSAC	2 cut(s)	1692, 2132
TseI	GCWGC	4 cut(s)	277, 449, 1641, 1662
Tsp45I	GTSAC	2 cut(s)	1692, 2132
TspDTI	ATGAA	6 cut(s)	399, 487, 1281, 1460, 1821, 2103
TspGWI	ACGGA	2 cut(s)	366, 1556
TspRI	CASTG	6 cut(s)	337, 436, 657, 708, 1701, 1844
Van91I	CCANNNNNTGG	4 cut(s)	91, 182, 1180, 1879
VpaK11BI	GGWCC	1 cut(s)	1183
XapI	RAATTY	1 cut(s)	1624
XceI	RCATGY	1 cut(s)	203
XmiI	GTMKAC	1 cut(s)	672
XmnI	GAANNNNTTC	1 cut(s)	1317
XspI	CTAG	1 cut(s)	2015

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.