Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0000802

Physical Location & Seq

Genomic Coordinates Forward (+)

22500845 .. 22502872

Gene Structure 2028 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g21230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGAGATACATAGCGAGTCAACCTGAGAACAAGATTCGTATTGTGGCTCTGTCAACTTCTCTTGCAAATGCAAAGGATCTTGGAGAATGGATAGGGGCTAGCTCTCATGGCCTTTTCAATTTTCCTCCTGGTGTGCGCCCAGTGCCTCTGGAAATACACATTCAGGGGGTGGATCTGGCTAATTTCGAAGCGAGGATGCAAGCAATGGCAAAACCCACATACACAGCAATTGTCCAGCATGCCAAGAATGGGAAACCAGCTCTTGTTTATGTTCCTACAAGGAAACATGTTCGACTAACGGCTGTCGATCTGATGACCTACTCAAATGCAGATGGTGGGGAGAAACCGTCATTTCTGTTGCGGTCTGTGGATGATATTGAGCCTTTCATTGAAAGACTTGGTGATGAAATTTTGAAAGGCACTTTGCGCAGTGGAGTGGGCTACCTGCATGAAGGTTTAAGCAGTTTGGACCAAGAAGTTGTGTCACAGCTGTTTGAAGCTGGGTGGATTCAAGTTTGTGTCATGAGCAGTTCAATGTGCTGGGGAGTGCCGTTGTCAGCCCATTTGGTGGTTGTGATGGGAACTCAGTATTATGATGGCCGGGAAAATGTTCACACTGATTACCCTGTTACTGATCTGTTGCAGATGATGGGTCATGCTAGTCGCCCTCTGCTAGATAATTCTGGGAAATGTGTCATCCTCTGCCACGCGCCTCGTAAAGAATACTACAAGAAGTTCTTGTACGAAGCATTCCCTGTTGAAAGCCATTTGCACCATTATCTACATGATAATCTGAATGCAGAAGTTGTTGCAGGAATAATTGAGAACAAGCAAGATGCTGTCGATTACCTTACATGGACTTTCTTGTACCGGAGGCTCACACAAAATCCCAACTATTACAATCTGCAGGGAGTTACTCAGCGGCATCTTTCTGATCACCTCTCGGAGCTTATTGAAAATACACTGAGCGACTTGGAGGCAAGCAAGTGTGTTGCAATTGAGGATGACATGGACCTTTCTCCTTTGAATCTTGGCATGATAGCTTCATACTATTACATCAGTTATACCACCATTGAGCGTTTCAGTTCGTCTTTAACTTCCAAAACAAAGATGAAGGGTCTTCTTGAGATTCTAACTCATGCTTCGGAGTATTCACAACTTCCTATTCGACCAGGGGAGGAAGAGGTAGTTCGGAGGCTAATTAACCACCAGAGGTTTTCCTTTGATAGTCCCAAATGCACAGATCCTCATGTTAAAGCAAATGCTCTGCTTCAGGCCCACTTTGCTAGGCAGCCTCTGGGTGGTAACCTAGCTTTGGACCAGCGAGAGGTGATCCTTTCCGCTAGTAGGTTGCTTCAGGCGATGGTTGATGTCATTTCCAGCAATGGCTGGCTAAGCCTTGCTGTCTTAGCCATGGAAGTCAGCCAGATGGTGACGCAGGGCATGTGGGACAGGGACTCGATGCTTCTACAGCTTCCTCACTTCACAAAGGAGTTGGCAAAGAGATGCCAGGAAAATCCAGGAAAGAGTATAGAGACAGTGTTTGATTTGGTTGAGTTGGACGATGATGAAAGGCGCGACCTACTTCAGATGTCAGACTCGCAGCTGCTGGATATTGCACGATTTTGCAACCGCTTTCCCAACATTGATATGGTATATGAGGTGCTTGATAGGGATAACATAAGGGTCGGGGAAGAAATCACTCTGCTAGTTACTCTCGAGCGTGACCTTGAAGGGAGGACTGAGGTAGGTCCTGTGGATGCCCTGAGGTATCCCAAGGCAAAAGAAGAGGGCTGGTGGCTTGTGGTCGGCGATACCAAGACAAACTCGTTGCTCGCCATCAAGAGAGTTTCGCTGCAACGGAGGGCCAAGGTGAAGCTCGAGTTTGCTGCTCCTGCCGAACCCGGAGAGAAGAGTTTCATTCTTTATTTCATGTGTGATTCATATTTGGGATGCGATCAGGAATATGATTTCACTCTTGATATTAAAGATGCAGCAGGGCCTGACGACAACAGCGGCAGCGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000354 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005682 GO:0005911 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009506 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022613 GO:0022618 GO:0030054 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0042623 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0046540 GO:0055044 GO:0065003 GO:0070013 GO:0070035 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0097526 GO:0120114 GO:0140098 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD Helicase_C Sec63

Protein Analysis

676

Amino Acids

76.15

Weight (kDa)

5.26

Isoelectric Point (pI)

45.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_SNRNP200	PF23445	254 - 335	7.4e-39	Winged Helix-turn-helix domain
Sec63	PF02889	341 - 658	1.8e-72	Sec63 Brl domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000802)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20960 AT1G20960 AT2G42270
fragaria_vesca	FvH4_5g21940 FvH4_5g30070 FvH4_6g00860 FvH4_6g00860 FvH4_6g47200
malus_domestica	MD04G1240400.v1.1 MD09G1062900.v1.1 MD09G1063000.v1.1 MD12G1257300.v1.1
prunus_persica	Prupe.6G358100_v2.0.a1 Prupe.6G358100_v2.0.a1
pyrus_communis	pycom04g21210 pycom04g21230 pycom111g05330 pycom12g23600 pycom12g23620
rosa_chinensis	RchiOBHm_Chr2g0166221 RchiOBHm_Chr3g0448041 RchiOBHm_Chr3g0448351 RchiOBHm_Chr5g0014801 RchiOBHm_Chr7g0209461
rosa_laevigata	RLG00000003133 RLG00000021598 RLG00000021599 RLG00000025925 RLG00000025950 RLG00000025953 RLG00000032142
rosa_multiflora	Rmu_co8520521.1_g000001 Rmu_sc0005582.1_g000009 Rmu_sc0005969.1_g000018 Rmu_sc0015167.1_g000007 Rmu_ssc0000323.1_g000031
rosa_roxburghii	Rroxscaffold_1G00061750 Rroxscaffold_2G00085080 Rroxscaffold_3G00249430 Rroxscaffold_6G00426200 Rroxscaffold_6G00426480 Rroxscaffold_6G00426530
rosa_rugosa	Rorug02G0521300 Rorug02G0607900 Rorug02G0611500 Rorug02G0611600 Rorug07G0113200
rosa_samantha	Rh2AG587300 Rh2BG599200 Rh2CG569600 Rh2DG608900 Rh3AG010500 Rh3AG010600 Rh3BG010200 Rh3BG010300 Rh3CG009900 Rh3CG010000 Rh3DG010600 Rh3DG010700 Rh5CG124900 Rh7AG247100 Rh7BG242100 Rh7CG262700 Rh7DG253400
rosa_wichuraiana	Rw0G020040 Rw2G048960 Rw3G000580 Rw3G000830 Rw7G020900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	428
Acc36I	ACCTGC	1 cut(s)	453
AccB7I	CCANNNNNTGG	1 cut(s)	568
AccII	CGCG	2 cut(s)	710, 1578
AciI	CCGC	5 cut(s)	361, 922, 1341, 1633, 2016
AclWI	GGATC	4 cut(s)	84, 180, 1238, 1327
AcoI	YGGCCR	1 cut(s)	598
AcsI	RAATTY	1 cut(s)	408
AcuI	CTGAAG	3 cut(s)	1256, 1340, 1571
AfaI	GTAC	2 cut(s)	743, 869
AfiI	CCNNNNNNNGG	6 cut(s)	249, 568, 1301, 1315, 1327, 1347
AflIII	ACRYGT	1 cut(s)	286
AjnI	CCWGG	4 cut(s)	127, 1171, 1509, 1519
Alw26I	GTCTC	1 cut(s)	1529
AlwI	GGATC	4 cut(s)	84, 180, 1238, 1327
AlwNI	CAGNNNCTG	3 cut(s)	1297, 1609, 2003
Ama87I	CYCGRG	2 cut(s)	1718, 1880
AoxI	GGCC	5 cut(s)	109, 598, 1275, 1866, 2000
ApeKI	GCWGC	7 cut(s)	1291, 1603, 1606, 1855, 1889, 1994, 2019
ApoI	RAATTY	1 cut(s)	408
Asp700I	GAANNNNTTC	2 cut(s)	609, 1916
AspLEI	GCGC	4 cut(s)	138, 429, 712, 1578
AspS9I	GGNCC	7 cut(s)	469, 1012, 1276, 1318, 1751, 1866, 2000
AsuC2I	CCSGG	2 cut(s)	602, 1905
AsuHPI	GGTGA	5 cut(s)	413, 929, 1342, 1444, 1885
AsuII	TTCGAA	1 cut(s)	186
AsuNHI	GCTAGC	1 cut(s)	98
AvaI	CYCGRG	2 cut(s)	1718, 1880
AvaII	GGWCC	4 cut(s)	469, 1012, 1318, 1751
AxyI	CCTNAGG	1 cut(s)	1766
BarI	GAAGNNNNNNTAC	2 cut(s)	725, 757
BbsI	GAAGAC	1 cut(s)	1112
BbvI	GCAGC	6 cut(s)	1303, 1593, 1615, 1842, 1876, 2006
BccI	CCATC	7 cut(s)	326, 571, 590, 643, 1357, 1423, 1847
BceAI	ACGGC	2 cut(s)	315, 535
BcgI	CGANNNNNNTGC	2 cut(s)	1871, 1905
BciT130I	CCWGG	4 cut(s)	129, 1173, 1511, 1521
BciVI	GTATCC	1 cut(s)	1782
BclI	TGATCA	1 cut(s)	934
BcnI	CCSGG	2 cut(s)	602, 1905
BcoDI	GTCTC	1 cut(s)	1529
BfaI	CTAG	7 cut(s)	99, 660, 674, 1287, 1310, 1344, 1709
BfmI	CTRYAG	2 cut(s)	905, 1469
BfuAI	ACCTGC	1 cut(s)	453
BfuI	GTATCC	1 cut(s)	1782
BisI	GCNGC	9 cut(s)	923, 1292, 1604, 1607, 1856, 1890, 1995, 2017, 2020
BlpI	GCTNAGC	1 cut(s)	1394
BlsI	GCNGC	9 cut(s)	924, 1293, 1605, 1608, 1857, 1891, 1996, 2018, 2021
Bme1390I	CCNGG	6 cut(s)	129, 602, 1173, 1511, 1521, 1905
Bme18I	GGWCC	4 cut(s)	469, 1012, 1318, 1751
BmeT110I	CYCGRG	2 cut(s)	1718, 1880
BmgT120I	GGNCC	7 cut(s)	469, 1012, 1276, 1318, 1751, 1866, 2000
BmrFI	CCNGG	6 cut(s)	129, 602, 1173, 1511, 1521, 1905
BmrI	ACTGGG	1 cut(s)	134
BmsI	GCATC	8 cut(s)	186, 826, 934, 1452, 1496, 1750, 1943, 1981
BmtI	GCTAGC	1 cut(s)	102
BmuI	ACTGGG	1 cut(s)	134
BpiI	GAAGAC	1 cut(s)	1112
Bpu1102I	GCTNAGC	1 cut(s)	1394
Bpu14I	TTCGAA	1 cut(s)	186
BpuEI	CTTGAG	1 cut(s)	1145
BpuMI	CCSGG	2 cut(s)	602, 1905
BsaJI	CCNNGG	4 cut(s)	1172, 1413, 1776, 1869
BsaWI	WCCGGW	1 cut(s)	870
BsaXI	ACNNNNNCTCC	2 cut(s)	332, 362
Bsc4I	CCNNNNNNNGG	6 cut(s)	249, 568, 1301, 1315, 1327, 1347
Bse1I	ACTGG	1 cut(s)	140
Bse21I	CCTNAGG	1 cut(s)	1766
Bse3DI	GCAATG	2 cut(s)	210, 1390
BseBI	CCWGG	4 cut(s)	129, 1173, 1511, 1521
BseDI	CCNNGG	4 cut(s)	1172, 1413, 1776, 1869
BseGI	GGATG	6 cut(s)	201, 376, 696, 1009, 1765, 1958
BseLI	CCNNNNNNNGG	6 cut(s)	249, 568, 1301, 1315, 1327, 1347
BseMI	GCAATG	2 cut(s)	210, 1390
BseMII	CTCAG	6 cut(s)	15, 599, 932, 956, 1734, 1757
BseNI	ACTGG	1 cut(s)	140
BseXI	GCAGC	6 cut(s)	1303, 1593, 1615, 1842, 1876, 2006
BseYI	CCCAGC	2 cut(s)	500, 540
Bsh1236I	CGCG	2 cut(s)	710, 1578
BshFI	GGCC	5 cut(s)	111, 600, 1277, 1868, 2002
BsiHKCI	CYCGRG	2 cut(s)	1718, 1880
BsiSI	CCGG	3 cut(s)	601, 871, 1905
BslFI	GGGAC	3 cut(s)	1215, 1463, 1469
BslI	CCNNNNNNNGG	6 cut(s)	249, 568, 1301, 1315, 1327, 1347
BsmAI	GTCTC	1 cut(s)	1529
BsmFI	GGGAC	3 cut(s)	1215, 1463, 1469
BsmI	GAATGC	2 cut(s)	749, 802
BsnI	GGCC	5 cut(s)	111, 600, 1277, 1868, 2002
BsoBI	CYCGRG	2 cut(s)	1718, 1880
Bsp119I	TTCGAA	1 cut(s)	186
Bsp143I	GATC	8 cut(s)	76, 172, 307, 634, 934, 1243, 1332, 1957
Bsp1720I	GCTNAGC	1 cut(s)	1394
Bsp19I	CCATGG	1 cut(s)	1413
BspACI	CCGC	5 cut(s)	361, 922, 1341, 1633, 2016
BspANI	GGCC	5 cut(s)	111, 600, 1277, 1868, 2002
BspCNI	CTCAG	6 cut(s)	16, 598, 931, 957, 1735, 1758
BspFNI	CGCG	2 cut(s)	710, 1578
BspHI	TCATGA	1 cut(s)	522
BspMAI	CTGCAG	1 cut(s)	909
BspMI	ACCTGC	1 cut(s)	453
BspOI	GCTAGC	1 cut(s)	102
BspPI	GGATC	4 cut(s)	84, 180, 1238, 1327
BspT104I	TTCGAA	1 cut(s)	186
BsrDI	GCAATG	2 cut(s)	210, 1390
BsrI	ACTGG	1 cut(s)	140
BssECI	CCNNGG	4 cut(s)	1172, 1413, 1776, 1869
BssMI	GATC	8 cut(s)	76, 172, 307, 634, 934, 1243, 1332, 1957
BssT1I	CCWWGG	3 cut(s)	1413, 1776, 1869
Bst2UI	CCWGG	4 cut(s)	129, 1173, 1511, 1521
Bst4CI	ACNGT	2 cut(s)	348, 1540
Bst6I	CTCTTC	3 cut(s)	1176, 1782, 1907
BstBI	TTCGAA	1 cut(s)	186
BstC8I	GCNNGC	6 cut(s)	100, 201, 240, 982, 1391, 1836
BstDEI	CTNAG	8 cut(s)	24, 585, 918, 965, 1394, 1408, 1743, 1766
BstDSI	CCRYGG	1 cut(s)	1413
BstEII	GGTNACC	1 cut(s)	1304
BstF5I	GGATG	6 cut(s)	201, 376, 696, 1009, 1765, 1958
BstFNI	CGCG	2 cut(s)	710, 1578
BstHHI	GCGC	4 cut(s)	138, 429, 712, 1578
BstKTI	GATC	8 cut(s)	79, 175, 310, 637, 937, 1246, 1335, 1960
BstMAI	GTCTC	1 cut(s)	1529
BstMBI	GATC	8 cut(s)	76, 172, 307, 634, 934, 1243, 1332, 1957
BstMWI	GCNNNNNNNGC	8 cut(s)	108, 142, 426, 1283, 1395, 1409, 1471, 1895
BstNI	CCWGG	4 cut(s)	129, 1173, 1511, 1521
BstNSI	RCATGY	3 cut(s)	242, 290, 1447
BstPI	GGTNACC	1 cut(s)	1304
BstSCI	CCNGG	6 cut(s)	127, 600, 1171, 1509, 1519, 1903
BstSFI	CTRYAG	2 cut(s)	905, 1469
BstUI	CGCG	2 cut(s)	710, 1578
BstV1I	GCAGC	6 cut(s)	1303, 1593, 1615, 1842, 1876, 2006
BstV2I	GAAGAC	1 cut(s)	1112
BstX2I	RGATCY	3 cut(s)	76, 172, 1243
BstYI	RGATCY	3 cut(s)	76, 172, 1243
Bsu36I	CCTNAGG	1 cut(s)	1766
BsuI	GTATCC	1 cut(s)	1782
BsuRI	GGCC	5 cut(s)	111, 600, 1277, 1868, 2002
BtgI	CCRYGG	1 cut(s)	1413
BtgZI	GCGATG	1 cut(s)	1376
BtsCI	GGATG	6 cut(s)	201, 376, 696, 1009, 1765, 1958
BtsI	GCAGTG	1 cut(s)	436
BtsIMutI	CAGTG	5 cut(s)	147, 436, 615, 962, 1545
BveI	ACCTGC	1 cut(s)	453
Cac8I	GCNNGC	6 cut(s)	100, 201, 240, 982, 1391, 1836
CaiI	CAGNNNCTG	3 cut(s)	1297, 1609, 2003
CciI	TCATGA	1 cut(s)	522
CfoI	GCGC	4 cut(s)	138, 429, 712, 1578
Cfr13I	GGNCC	7 cut(s)	469, 1012, 1276, 1318, 1751, 1866, 2000
CseI	GACGC	1 cut(s)	1444
Csp6I	GTAC	2 cut(s)	742, 868
CviQI	GTAC	2 cut(s)	742, 868
DdeI	CTNAG	8 cut(s)	24, 585, 918, 965, 1394, 1408, 1743, 1766
DpnI	GATC	8 cut(s)	78, 174, 309, 636, 936, 1245, 1334, 1959
DpnII	GATC	8 cut(s)	76, 172, 307, 634, 934, 1243, 1332, 1957
EaeI	YGGCCR	1 cut(s)	598
Eam1104I	CTCTTC	3 cut(s)	1176, 1782, 1907
EarI	CTCTTC	3 cut(s)	1176, 1782, 1907
Eco130I	CCWWGG	3 cut(s)	1413, 1776, 1869
Eco47I	GGWCC	4 cut(s)	469, 1012, 1318, 1751
Eco57I	CTGAAG	3 cut(s)	1256, 1340, 1571
Eco81I	CCTNAGG	1 cut(s)	1766
Eco88I	CYCGRG	2 cut(s)	1718, 1880
Eco91I	GGTNACC	1 cut(s)	1304
EcoO109I	RGGNCCY	2 cut(s)	1751, 2000
EcoO65I	GGTNACC	1 cut(s)	1304
EcoRII	CCWGG	4 cut(s)	127, 1171, 1509, 1519
EcoT14I	CCWWGG	3 cut(s)	1413, 1776, 1869
ErhI	CCWWGG	3 cut(s)	1413, 1776, 1869
FalI	AAGNNNNNCTT	2 cut(s)	722, 754
FaqI	GGGAC	3 cut(s)	1215, 1463, 1469
FbaI	TGATCA	1 cut(s)	934
Fnu4HI	GCNGC	9 cut(s)	923, 1292, 1604, 1607, 1856, 1890, 1995, 2017, 2020
FokI	GGATG	6 cut(s)	208, 383, 683, 1016, 1772, 1965
Fsp4HI	GCNGC	9 cut(s)	923, 1292, 1604, 1607, 1856, 1890, 1995, 2017, 2020
FspBI	CTAG	7 cut(s)	99, 660, 674, 1287, 1310, 1344, 1709
FspI	TGCGCA	1 cut(s)	428
GlaI	GCGC	4 cut(s)	137, 428, 711, 1577
GluI	GCNGC	9 cut(s)	923, 1292, 1604, 1607, 1856, 1890, 1995, 2017, 2020
GsaI	CCCAGC	2 cut(s)	504, 544
HaeIII	GGCC	5 cut(s)	111, 600, 1277, 1868, 2002
HapII	CCGG	3 cut(s)	601, 871, 1905
HgaI	GACGC	1 cut(s)	1444
HhaI	GCGC	4 cut(s)	138, 429, 712, 1578
Hin6I	GCGC	4 cut(s)	136, 427, 710, 1576
HinP1I	GCGC	4 cut(s)	136, 427, 710, 1576
HincII	GTYRAC	2 cut(s)	20, 54
HindII	GTYRAC	2 cut(s)	20, 54
HinfI	GANTC	8 cut(s)	16, 34, 508, 1027, 1129, 1457, 1598, 1940
HpaII	CCGG	3 cut(s)	601, 871, 1905
HphI	GGTGA	5 cut(s)	413, 929, 1342, 1444, 1885
Hpy166II	GTNNAC	3 cut(s)	20, 54, 613
Hpy188I	TCNGA	8 cut(s)	312, 795, 934, 946, 1147, 1194, 1590, 1597
Hpy188III	TCNNGA	7 cut(s)	149, 523, 1124, 1718, 1843, 1961, 1979
Hpy8I	GTNNAC	3 cut(s)	20, 54, 613
HpyAV	CCTTC	3 cut(s)	446, 1108, 1727
HpyCH4III	ACNGT	2 cut(s)	348, 1540
HpyF10VI	GCNNNNNNNGC	8 cut(s)	108, 142, 426, 1283, 1395, 1409, 1471, 1895
HpyF3I	CTNAG	8 cut(s)	24, 585, 918, 965, 1394, 1408, 1743, 1766
HspAI	GCGC	4 cut(s)	136, 427, 710, 1576
Ksp22I	TGATCA	1 cut(s)	934
Kzo9I	GATC	8 cut(s)	76, 172, 307, 634, 934, 1243, 1332, 1957
LmnI	GCTCC	2 cut(s)	946, 1897
Lsp1109I	GCAGC	6 cut(s)	1303, 1593, 1615, 1842, 1876, 2006
LweI	GCATC	8 cut(s)	186, 826, 934, 1452, 1496, 1750, 1943, 1981
MaeI	CTAG	7 cut(s)	99, 660, 674, 1287, 1310, 1344, 1709
MaeIII	GTNAC	7 cut(s)	483, 628, 913, 1304, 1432, 1711, 1724
MalI	GATC	8 cut(s)	78, 174, 309, 636, 936, 1245, 1334, 1959
MboI	GATC	8 cut(s)	76, 172, 307, 634, 934, 1243, 1332, 1957
MboII	GAAGA	5 cut(s)	1112, 1193, 1706, 1799, 1924
MfeI	CAATTG	2 cut(s)	228, 996
MflI	RGATCY	3 cut(s)	76, 172, 1243
MluCI	AATT	8 cut(s)	118, 181, 228, 408, 679, 819, 996, 1200
MlyI	GAGTC	3 cut(s)	25, 1451, 1592
MmeI	TCCRAC	1 cut(s)	1539
MroXI	GAANNNNTTC	2 cut(s)	609, 1916
MseI	TTAA	5 cut(s)	458, 1094, 1203, 1254, 1986
MslI	CAYNNNNRTG	1 cut(s)	1649
MspA1I	CMGCKG	4 cut(s)	490, 922, 1606, 2016
MspI	CCGG	3 cut(s)	601, 871, 1905
MspR9I	CCNGG	6 cut(s)	129, 602, 1173, 1511, 1521, 1905
MunI	CAATTG	2 cut(s)	228, 996
Mva1269I	GAATGC	2 cut(s)	749, 802
MvaI	CCWGG	4 cut(s)	129, 1173, 1511, 1521
MvnI	CGCG	2 cut(s)	710, 1578
MwoI	GCNNNNNNNGC	8 cut(s)	108, 142, 426, 1283, 1395, 1409, 1471, 1895
NciI	CCSGG	2 cut(s)	602, 1905
NcoI	CCATGG	1 cut(s)	1413
NdeII	GATC	8 cut(s)	76, 172, 307, 634, 934, 1243, 1332, 1957
NheI	GCTAGC	1 cut(s)	98
NmuCI	GTSAC	3 cut(s)	483, 1432, 1724
NsbI	TGCGCA	1 cut(s)	428
NspI	RCATGY	3 cut(s)	242, 290, 1447
NspV	TTCGAA	1 cut(s)	186
PaeI	GCATGC	1 cut(s)	242
PaeR7I	CTCGAG	2 cut(s)	1718, 1880
PagI	TCATGA	1 cut(s)	522
PciI	ACATGT	1 cut(s)	286
PctI	GAATGC	2 cut(s)	749, 802
PdmI	GAANNNNTTC	2 cut(s)	609, 1916
PfeI	GAWTC	5 cut(s)	34, 508, 1027, 1129, 1940
PflMI	CCANNNNNTGG	1 cut(s)	568
PfoI	TCCNGGA	1 cut(s)	1519
PkrI	GCNGC	9 cut(s)	924, 1293, 1605, 1608, 1857, 1891, 1996, 2018, 2021
PleI	GAGTC	3 cut(s)	24, 1451, 1592
PpsI	GAGTC	3 cut(s)	24, 1451, 1592
PpuMI	RGGWCCY	1 cut(s)	1751
PscI	ACATGT	1 cut(s)	286
Psp5II	RGGWCCY	1 cut(s)	1751
Psp6I	CCWGG	4 cut(s)	127, 1171, 1509, 1519
PspEI	GGTNACC	1 cut(s)	1304
PspFI	CCCAGC	2 cut(s)	500, 540
PspGI	CCWGG	4 cut(s)	127, 1171, 1509, 1519
PspPI	GGNCC	7 cut(s)	469, 1012, 1276, 1318, 1751, 1866, 2000
PspPPI	RGGWCCY	1 cut(s)	1751
PspXI	VCTCGAGB	1 cut(s)	1880
PstI	CTGCAG	1 cut(s)	909
PstNI	CAGNNNCTG	3 cut(s)	1297, 1609, 2003
PsuI	RGATCY	3 cut(s)	76, 172, 1243
PvuII	CAGCTG	2 cut(s)	490, 1606
RsaI	GTAC	2 cut(s)	743, 869
RsaNI	GTAC	2 cut(s)	742, 868
RseI	CAYNNNNRTG	1 cut(s)	1649
SaqAI	TTAA	5 cut(s)	458, 1094, 1203, 1254, 1986
SatI	GCNGC	9 cut(s)	923, 1292, 1604, 1607, 1856, 1890, 1995, 2017, 2020
Sau3AI	GATC	8 cut(s)	76, 172, 307, 634, 934, 1243, 1332, 1957
Sau96I	GGNCC	7 cut(s)	469, 1012, 1276, 1318, 1751, 1866, 2000
SchI	GAGTC	3 cut(s)	25, 1451, 1592
ScrFI	CCNGG	6 cut(s)	129, 602, 1173, 1511, 1521, 1905
SfaNI	GCATC	8 cut(s)	186, 826, 934, 1452, 1496, 1750, 1943, 1981
SfcI	CTRYAG	2 cut(s)	905, 1469
Sfr274I	CTCGAG	2 cut(s)	1718, 1880
SfuI	TTCGAA	1 cut(s)	186
SinI	GGWCC	4 cut(s)	469, 1012, 1318, 1751
SlaI	CTCGAG	2 cut(s)	1718, 1880
SmiMI	CAYNNNNRTG	1 cut(s)	1649
SmlI	CTYRAG	3 cut(s)	1124, 1718, 1880
SmoI	CTYRAG	3 cut(s)	1124, 1718, 1880
SphI	GCATGC	1 cut(s)	242
Sse9I	AATT	8 cut(s)	118, 181, 228, 408, 679, 819, 996, 1200
SsiI	CCGC	5 cut(s)	361, 922, 1341, 1633, 2016
SspMI	CTAG	7 cut(s)	99, 660, 674, 1287, 1310, 1344, 1709
StyD4I	CCNGG	6 cut(s)	127, 600, 1171, 1509, 1519, 1903
StyI	CCWWGG	3 cut(s)	1413, 1776, 1869
TaaI	ACNGT	2 cut(s)	348, 1540
TaqI	TCGA	8 cut(s)	186, 292, 306, 843, 1168, 1460, 1719, 1881
TasI	AATT	8 cut(s)	118, 181, 228, 408, 679, 819, 996, 1200
TauI	GCSGC	2 cut(s)	925, 2019
TfiI	GAWTC	5 cut(s)	34, 508, 1027, 1129, 1940
Tru1I	TTAA	5 cut(s)	458, 1094, 1203, 1254, 1986
Tru9I	TTAA	5 cut(s)	458, 1094, 1203, 1254, 1986
TscAI	CASTG	5 cut(s)	147, 436, 622, 969, 1545
TseFI	GTSAC	3 cut(s)	483, 1432, 1724
TseI	GCWGC	7 cut(s)	1291, 1603, 1606, 1855, 1889, 1994, 2019
Tsp45I	GTSAC	3 cut(s)	483, 1432, 1724
TspDTI	ATGAA	9 cut(s)	376, 420, 465, 1035, 1127, 1584, 1909, 1921, 1932
TspGWI	ACGGA	1 cut(s)	1876
TspRI	CASTG	5 cut(s)	147, 436, 622, 969, 1545
Van91I	CCANNNNNTGG	1 cut(s)	568
VpaK11BI	GGWCC	4 cut(s)	469, 1012, 1318, 1751
XapI	RAATTY	1 cut(s)	408
XceI	RCATGY	3 cut(s)	242, 290, 1447
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1648
XhoI	CTCGAG	2 cut(s)	1718, 1880
XmnI	GAANNNNTTC	2 cut(s)	609, 1916
XspI	CTAG	7 cut(s)	99, 660, 674, 1287, 1310, 1344, 1709

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.