U5 small nuclear ribonucleoprotein 200 kDa
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DEAD | PF00270 | 69 - 242 | 7.7e-16 | DEAD/DEAH box helicase |
| Helicase_C | PF00271 | 333 - 408 | 1.6e-06 | Helicase conserved C-terminal domain |
| WHD_SNRNP200 | PF23445 | 470 - 518 | 3.1e-09 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 557 - 752 | 1.2e-58 | Sec63 Brl domain |
| DEAD | PF00270 | 777 - 949 | 1.2e-26 | DEAD/DEAH box helicase |
| ResIII | PF04851 | 779 - 921 | 5.3e-08 | Type III restriction enzyme, res subunit |
| WHD_SNRNP200 | PF23445 | 1172 - 1236 | 4e-18 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 1251 - 1532 | 5.3e-47 | Sec63 Brl domain |
| polyprenyl_synt | PF00348 | 1654 - 1957 | 2.1e-58 | Polyprenyl synthetase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 3139 |
| Acc36I | ACCTGC | 1 cut(s) | 4128 |
| Acc65I | GGTACC | 1 cut(s) | 980 |
| AccB1I | GGYRCC | 2 cut(s) | 431, 980 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2341, 3193 |
| AccI | GTMKAC | 2 cut(s) | 1153, 5062 |
| AccII | CGCG | 6 cut(s) | 733, 2908, 4892, 5080, 5223, 5817 |
| AccIII | TCCGGA | 2 cut(s) | 85, 2808 |
| AciI | CCGC | 8 cut(s) | 966, 1097, 2089, 2437, 2917, 3124, 5223, 5758 |
| AclI | AACGTT | 1 cut(s) | 5533 |
| AclWI | GGATC | 6 cut(s) | 2800, 3078, 3414, 3442, 3750, 3968 |
| AcoI | YGGCCR | 1 cut(s) | 1617 |
| AcsI | RAATTY | 7 cut(s) | 1471, 1793, 2265, 3361, 3487, 4842, 5239 |
| AcuI | CTGAAG | 4 cut(s) | 2594, 3858, 3986, 4662 |
| AcvI | CACGTG | 1 cut(s) | 2549 |
| AdeI | CACNNNGTG | 1 cut(s) | 3698 |
| AflII | CTTAAG | 1 cut(s) | 3632 |
| AflIII | ACRYGT | 1 cut(s) | 3049 |
| AgeI | ACCGGT | 2 cut(s) | 3800, 4926 |
| AjnI | CCWGG | 5 cut(s) | 94, 140, 889, 1662, 4816 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1440, 1472, 4028, 4060, 5660, 5692 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 609, 641 |
| Alw21I | GWGCWC | 5 cut(s) | 247, 1137, 1207, 2002, 2038 |
| AlwI | GGATC | 6 cut(s) | 2800, 3078, 3414, 3442, 3750, 3968 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1721 |
| Ama87I | CYCGRG | 5 cut(s) | 2555, 4015, 4189, 5292, 5960 |
| Aor13HI | TCCGGA | 2 cut(s) | 85, 2808 |
| AoxI | GGCC | 9 cut(s) | 8, 77, 619, 1617, 1881, 2743, 4005, 4437, 5943 |
| ApoI | RAATTY | 7 cut(s) | 1471, 1793, 2265, 3361, 3487, 4842, 5239 |
| AseI | ATTAAT | 3 cut(s) | 1035, 1896, 2282 |
| AsiGI | ACCGGT | 2 cut(s) | 3800, 4926 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2607 |
| Asp718I | GGTACC | 1 cut(s) | 980 |
| AspA2I | CCTAGG | 1 cut(s) | 3422 |
| AspLEI | GCGC | 8 cut(s) | 733, 2908, 2910, 3186, 4894, 5817, 5819, 6001 |
| AspS9I | GGNCC | 9 cut(s) | 88, 254, 620, 1419, 2744, 3667, 4048, 4437, 5387 |
| AsuC2I | CCSGG | 5 cut(s) | 258, 685, 2912, 3356, 3903 |
| AsuII | TTCGAA | 1 cut(s) | 2798 |
| AsuNHI | GCTAGC | 2 cut(s) | 1688, 5911 |
| AvaI | CYCGRG | 5 cut(s) | 2555, 4015, 4189, 5292, 5960 |
| AvaII | GGWCC | 6 cut(s) | 88, 254, 1419, 3667, 4048, 5387 |
| AvrII | CCTAGG | 1 cut(s) | 3422 |
| AxyI | CCTNAGG | 1 cut(s) | 516 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 954, 987, 1701, 1734 |
| BalI | TGGCCA | 1 cut(s) | 1619 |
| BanI | GGYRCC | 2 cut(s) | 431, 980 |
| BanII | GRGCYC | 5 cut(s) | 1137, 1207, 2002, 2038, 5744 |
| BbrPI | CACGTG | 1 cut(s) | 2549 |
| BbsI | GAAGAC | 4 cut(s) | 1315, 2338, 3216, 3842 |
| Bbv12I | GWGCWC | 5 cut(s) | 247, 1137, 1207, 2002, 2038 |
| BbvCI | CCTCAGC | 1 cut(s) | 5 |
| BceAI | ACGGC | 2 cut(s) | 92, 2525 |
| BciT130I | CCWGG | 5 cut(s) | 96, 142, 891, 1664, 4818 |
| BciVI | GTATCC | 3 cut(s) | 955, 4549, 5374 |
| BclI | TGATCA | 4 cut(s) | 531, 1531, 5428, 5527 |
| BcnI | CCSGG | 5 cut(s) | 258, 685, 2912, 3356, 3903 |
| BfmI | CTRYAG | 8 cut(s) | 375, 3659, 3967, 4124, 4199, 4625, 5520, 5937 |
| BfoI | RGCGCY | 1 cut(s) | 6002 |
| BfrI | CTTAAG | 1 cut(s) | 3632 |
| BfuAI | ACCTGC | 1 cut(s) | 4128 |
| BfuI | GTATCC | 3 cut(s) | 955, 4549, 5374 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 5648 |
| BglII | AGATCT | 3 cut(s) | 785, 3244, 6007 |
| BlnI | CCTAGG | 1 cut(s) | 3422 |
| BlpI | GCTNAGC | 1 cut(s) | 1983 |
| BmcAI | AGTACT | 3 cut(s) | 1273, 4564, 4982 |
| Bme18I | GGWCC | 6 cut(s) | 88, 254, 1419, 3667, 4048, 5387 |
| BmeT110I | CYCGRG | 5 cut(s) | 2555, 4015, 4189, 5292, 5960 |
| BmgT120I | GGNCC | 9 cut(s) | 88, 254, 620, 1419, 2744, 3667, 4048, 4437, 5387 |
| BmrI | ACTGGG | 1 cut(s) | 2741 |
| BmtI | GCTAGC | 2 cut(s) | 1692, 5915 |
| BmuI | ACTGGG | 1 cut(s) | 2741 |
| BoxI | GACNNNNGTC | 1 cut(s) | 4053 |
| BpiI | GAAGAC | 4 cut(s) | 1315, 2338, 3216, 3842 |
| BpmI | CTGGAG | 3 cut(s) | 275, 683, 2622 |
| Bpu10I | CCTNAGC | 2 cut(s) | 5, 4950 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1983 |
| Bpu14I | TTCGAA | 1 cut(s) | 2798 |
| BpuEI | CTTGAG | 7 cut(s) | 788, 2336, 2673, 3875, 4152, 4337, 4349 |
| BpuMI | CCSGG | 5 cut(s) | 258, 685, 2912, 3356, 3903 |
| BsaAI | YACGTR | 1 cut(s) | 2549 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2627, 2782 |
| BsaI | GGTCTC | 4 cut(s) | 659, 2558, 4313, 5495 |
| BsaWI | WCCGGW | 4 cut(s) | 85, 2808, 3800, 4926 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 609, 639, 1323, 1353, 2574, 2604 |
| Bse118I | RCCGGY | 2 cut(s) | 3800, 4926 |
| Bse21I | CCTNAGG | 1 cut(s) | 516 |
| Bse3DI | GCAATG | 4 cut(s) | 3119, 4098, 4944, 5147 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2627, 2782 |
| BseAI | TCCGGA | 2 cut(s) | 85, 2808 |
| BseBI | CCWGG | 5 cut(s) | 96, 142, 891, 1664, 4818 |
| BseJI | GATNNNNATC | 2 cut(s) | 2627, 2782 |
| BseMI | GCAATG | 4 cut(s) | 3119, 4098, 4944, 5147 |
| BsePI | GCGCGC | 2 cut(s) | 2906, 5815 |
| BseRI | GAGGAG | 3 cut(s) | 1145, 1771, 2542 |
| BseYI | CCCAGC | 1 cut(s) | 5621 |
| BsgI | GTGCAG | 3 cut(s) | 2238, 2373, 2439 |
| Bsh1236I | CGCG | 6 cut(s) | 733, 2908, 4892, 5080, 5223, 5817 |
| BshFI | GGCC | 9 cut(s) | 10, 79, 621, 1619, 1883, 2745, 4007, 4439, 5945 |
| BshNI | GGYRCC | 2 cut(s) | 431, 980 |
| BshTI | ACCGGT | 2 cut(s) | 3800, 4926 |
| BsiHKAI | GWGCWC | 5 cut(s) | 247, 1137, 1207, 2002, 2038 |
| BsiHKCI | CYCGRG | 5 cut(s) | 2555, 4015, 4189, 5292, 5960 |
| BslFI | GGGAC | 6 cut(s) | 112, 1124, 1474, 3145, 3680, 5373 |
| BsmBI | CGTCTC | 1 cut(s) | 3166 |
| BsmFI | GGGAC | 6 cut(s) | 112, 1124, 1474, 3145, 3680, 5373 |
| BsmI | GAATGC | 2 cut(s) | 1121, 1447 |
| BsnI | GGCC | 9 cut(s) | 10, 79, 621, 1619, 1883, 2745, 4007, 4439, 5945 |
| Bso31I | GGTCTC | 4 cut(s) | 659, 2558, 4313, 5495 |
| BsoBI | CYCGRG | 5 cut(s) | 2555, 4015, 4189, 5292, 5960 |
| Bsp119I | TTCGAA | 1 cut(s) | 2798 |
| Bsp1286I | GDGCHC | 6 cut(s) | 247, 1137, 1207, 2002, 2038, 5744 |
| Bsp13I | TCCGGA | 2 cut(s) | 85, 2808 |
| Bsp1407I | TGTACA | 3 cut(s) | 560, 1487, 2047 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1983 |
| Bsp19I | CCATGG | 6 cut(s) | 2192, 3187, 4477, 4598, 5761, 5793 |
| BspACI | CCGC | 8 cut(s) | 966, 1097, 2089, 2437, 2917, 3124, 5223, 5758 |
| BspANI | GGCC | 9 cut(s) | 10, 79, 621, 1619, 1883, 2745, 4007, 4439, 5945 |
| BspEI | TCCGGA | 2 cut(s) | 85, 2808 |
| BspFNI | CGCG | 6 cut(s) | 733, 2908, 4892, 5080, 5223, 5817 |
| BspHI | TCATGA | 4 cut(s) | 457, 2878, 3279, 6024 |
| BspMAI | CTGCAG | 5 cut(s) | 379, 3971, 4629, 5524, 5941 |
| BspMI | ACCTGC | 1 cut(s) | 4128 |
| BspOI | GCTAGC | 2 cut(s) | 1692, 5915 |
| BspPI | GGATC | 6 cut(s) | 2800, 3078, 3414, 3442, 3750, 3968 |
| BspQI | GCTCTTC | 1 cut(s) | 2026 |
| BspT104I | TTCGAA | 1 cut(s) | 2798 |
| BspT107I | GGYRCC | 2 cut(s) | 431, 980 |
| BspTI | CTTAAG | 1 cut(s) | 3632 |
| BspTNI | GGTCTC | 4 cut(s) | 659, 2558, 4313, 5495 |
| BsrDI | GCAATG | 4 cut(s) | 3119, 4098, 4944, 5147 |
| BsrFI | RCCGGY | 2 cut(s) | 3800, 4926 |
| BsrGI | TGTACA | 3 cut(s) | 560, 1487, 2047 |
| BssAI | RCCGGY | 2 cut(s) | 3800, 4926 |
| BssHII | GCGCGC | 2 cut(s) | 2906, 5815 |
| BssNAI | GTATAC | 2 cut(s) | 1154, 5063 |
| Bst1107I | GTATAC | 2 cut(s) | 1154, 5063 |
| Bst2UI | CCWGG | 5 cut(s) | 96, 142, 891, 1664, 4818 |
| Bst6I | CTCTTC | 5 cut(s) | 483, 1872, 2026, 2238, 5793 |
| BstAFI | CTTAAG | 1 cut(s) | 3632 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2426, 5933 |
| BstAUI | TGTACA | 3 cut(s) | 560, 1487, 2047 |
| BstBAI | YACGTR | 1 cut(s) | 2549 |
| BstBI | TTCGAA | 1 cut(s) | 2798 |
| BstDSI | CCRYGG | 6 cut(s) | 2192, 3187, 4477, 4598, 5761, 5793 |
| BstEII | GGTNACC | 1 cut(s) | 5416 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1877 |
| BstFNI | CGCG | 6 cut(s) | 733, 2908, 4892, 5080, 5223, 5817 |
| BstH2I | RGCGCY | 1 cut(s) | 6002 |
| BstHHI | GCGC | 8 cut(s) | 733, 2908, 2910, 3186, 4894, 5817, 5819, 6001 |
| BstNI | CCWGG | 5 cut(s) | 96, 142, 891, 1664, 4818 |
| BstNSI | RCATGY | 8 cut(s) | 139, 1615, 1739, 2687, 2975, 3053, 4310, 5927 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 4053 |
| BstPI | GGTNACC | 1 cut(s) | 5416 |
| BstSFI | CTRYAG | 8 cut(s) | 375, 3659, 3967, 4124, 4199, 4625, 5520, 5937 |
| BstUI | CGCG | 6 cut(s) | 733, 2908, 4892, 5080, 5223, 5817 |
| BstV2I | GAAGAC | 4 cut(s) | 1315, 2338, 3216, 3842 |
| BstX2I | RGATCY | 8 cut(s) | 785, 2805, 3070, 3244, 3434, 3742, 3973, 6007 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 614, 2646 |
| BstYI | RGATCY | 8 cut(s) | 785, 2805, 3070, 3244, 3434, 3742, 3973, 6007 |
| BstZ17I | GTATAC | 2 cut(s) | 1154, 5063 |
| Bsu36I | CCTNAGG | 1 cut(s) | 516 |
| BsuI | GTATCC | 3 cut(s) | 955, 4549, 5374 |
| BsuRI | GGCC | 9 cut(s) | 10, 79, 621, 1619, 1883, 2745, 4007, 4439, 5945 |
| BtgI | CCRYGG | 6 cut(s) | 2192, 3187, 4477, 4598, 5761, 5793 |
| BtsI | GCAGTG | 2 cut(s) | 1015, 2994 |
| BveI | ACCTGC | 1 cut(s) | 4128 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1721 |
| CciI | TCATGA | 4 cut(s) | 457, 2878, 3279, 6024 |
| CfoI | GCGC | 8 cut(s) | 733, 2908, 2910, 3186, 4894, 5817, 5819, 6001 |
| Cfr10I | RCCGGY | 2 cut(s) | 3800, 4926 |
| Cfr13I | GGNCC | 9 cut(s) | 88, 254, 620, 1419, 2744, 3667, 4048, 4437, 5387 |
| CseI | GACGC | 3 cut(s) | 3183, 4043, 5229 |
| CspAI | ACCGGT | 2 cut(s) | 3800, 4926 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2815, 2850, 4157, 4192 |
| DraI | TTTAAA | 2 cut(s) | 153, 4990 |
| DraIII | CACNNNGTG | 1 cut(s) | 3698 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3139 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3139 |
| EaeI | YGGCCR | 1 cut(s) | 1617 |
| Eam1104I | CTCTTC | 5 cut(s) | 483, 1872, 2026, 2238, 5793 |
| EarI | CTCTTC | 5 cut(s) | 483, 1872, 2026, 2238, 5793 |
| EciI | GGCGGA | 1 cut(s) | 5747 |
| Ecl136II | GAGCTC | 4 cut(s) | 1135, 1205, 2000, 2036 |
| Eco147I | AGGCCT | 1 cut(s) | 4007 |
| Eco24I | GRGCYC | 5 cut(s) | 1137, 1207, 2002, 2038, 5744 |
| Eco31I | GGTCTC | 4 cut(s) | 659, 2558, 4313, 5495 |
| Eco47I | GGWCC | 6 cut(s) | 88, 254, 1419, 3667, 4048, 5387 |
| Eco53kI | GAGCTC | 4 cut(s) | 1135, 1205, 2000, 2036 |
| Eco57I | CTGAAG | 4 cut(s) | 2594, 3858, 3986, 4662 |
| Eco72I | CACGTG | 1 cut(s) | 2549 |
| Eco81I | CCTNAGG | 1 cut(s) | 516 |
| Eco88I | CYCGRG | 5 cut(s) | 2555, 4015, 4189, 5292, 5960 |
| Eco91I | GGTNACC | 1 cut(s) | 5416 |
| EcoICRI | GAGCTC | 4 cut(s) | 1135, 1205, 2000, 2036 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1877 |
| EcoO109I | RGGNCCY | 2 cut(s) | 620, 3667 |
| EcoO65I | GGTNACC | 1 cut(s) | 5416 |
| EcoRII | CCWGG | 5 cut(s) | 94, 140, 889, 1662, 4816 |
| EcoT22I | ATGCAT | 2 cut(s) | 994, 2973 |
| EcoT38I | GRGCYC | 5 cut(s) | 1137, 1207, 2002, 2038, 5744 |
| Esp3I | CGTCTC | 1 cut(s) | 3166 |
| FaqI | GGGAC | 6 cut(s) | 112, 1124, 1474, 3145, 3680, 5373 |
| FauI | CCCGC | 1 cut(s) | 1090 |
| FauNDI | CATATG | 2 cut(s) | 1075, 1954 |
| FbaI | TGATCA | 4 cut(s) | 531, 1531, 5428, 5527 |
| FblI | GTMKAC | 2 cut(s) | 1153, 5062 |
| FriOI | GRGCYC | 5 cut(s) | 1137, 1207, 2002, 2038, 5744 |
| GlaI | GCGC | 8 cut(s) | 732, 2907, 2909, 3185, 4893, 5816, 5818, 6000 |
| GsaI | CCCAGC | 1 cut(s) | 5625 |
| GsuI | CTGGAG | 3 cut(s) | 275, 683, 2622 |
| HaeII | RGCGCY | 1 cut(s) | 6002 |
| HaeIII | GGCC | 9 cut(s) | 10, 79, 621, 1619, 1883, 2745, 4007, 4439, 5945 |
| HgaI | GACGC | 3 cut(s) | 3183, 4043, 5229 |
| HhaI | GCGC | 8 cut(s) | 733, 2908, 2910, 3186, 4894, 5817, 5819, 6001 |
| Hin6I | GCGC | 8 cut(s) | 731, 2906, 2908, 3184, 4892, 5815, 5817, 5999 |
| HinP1I | GCGC | 8 cut(s) | 731, 2906, 2908, 3184, 4892, 5815, 5817, 5999 |
| HincII | GTYRAC | 2 cut(s) | 2077, 5043 |
| HindII | GTYRAC | 2 cut(s) | 2077, 5043 |
| HindIII | AAGCTT | 9 cut(s) | 116, 1482, 1931, 2117, 2301, 3462, 3677, 4746, 4961 |
| HpaI | GTTAAC | 1 cut(s) | 2077 |
| Hpy99I | CGWCG | 2 cut(s) | 50, 5026 |
| HpyCH4IV | ACGT | 4 cut(s) | 48, 876, 2548, 5533 |
| HpySE526I | ACGT | 4 cut(s) | 48, 876, 2548, 5533 |
| HspAI | GCGC | 8 cut(s) | 731, 2906, 2908, 3184, 4892, 5815, 5817, 5999 |
| Kpn2I | TCCGGA | 2 cut(s) | 85, 2808 |
| KpnI | GGTACC | 1 cut(s) | 984 |
| Ksp22I | TGATCA | 4 cut(s) | 531, 1531, 5428, 5527 |
| KspAI | GTTAAC | 1 cut(s) | 2077 |
| LguI | GCTCTTC | 1 cut(s) | 2026 |
| MaeII | ACGT | 4 cut(s) | 48, 876, 2548, 5533 |
| MfeI | CAATTG | 5 cut(s) | 848, 1436, 2106, 3000, 5607 |
| MflI | RGATCY | 8 cut(s) | 785, 2805, 3070, 3244, 3434, 3742, 3973, 6007 |
| MhlI | GDGCHC | 6 cut(s) | 247, 1137, 1207, 2002, 2038, 5744 |
| MlsI | TGGCCA | 1 cut(s) | 1619 |
| MluNI | TGGCCA | 1 cut(s) | 1619 |
| MlyI | GAGTC | 7 cut(s) | 50, 62, 487, 1533, 1869, 4181, 4427 |
| MmeI | TCCRAC | 7 cut(s) | 272, 793, 1309, 2833, 3684, 4134, 5045 |
| Mox20I | TGGCCA | 1 cut(s) | 1619 |
| Mph1103I | ATGCAT | 2 cut(s) | 994, 2973 |
| MroI | TCCGGA | 2 cut(s) | 85, 2808 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2607 |
| MscI | TGGCCA | 1 cut(s) | 1619 |
| MslI | CAYNNNNRTG | 4 cut(s) | 612, 2214, 5193, 5510 |
| Msp20I | TGGCCA | 1 cut(s) | 1619 |
| MspA1I | CMGCKG | 2 cut(s) | 380, 5525 |
| MspCI | CTTAAG | 1 cut(s) | 3632 |
| MunI | CAATTG | 5 cut(s) | 848, 1436, 2106, 3000, 5607 |
| Mva1269I | GAATGC | 2 cut(s) | 1121, 1447 |
| MvaI | CCWGG | 5 cut(s) | 96, 142, 891, 1664, 4818 |
| MvnI | CGCG | 6 cut(s) | 733, 2908, 4892, 5080, 5223, 5817 |
| NciI | CCSGG | 5 cut(s) | 258, 685, 2912, 3356, 3903 |
| NcoI | CCATGG | 6 cut(s) | 2192, 3187, 4477, 4598, 5761, 5793 |
| NdeI | CATATG | 2 cut(s) | 1075, 1954 |
| NheI | GCTAGC | 2 cut(s) | 1688, 5911 |
| NmeAIII | GCCGAG | 2 cut(s) | 4465, 5002 |
| NmuCI | GTSAC | 9 cut(s) | 65, 505, 1012, 1804, 2456, 2590, 3076, 4162, 5155 |
| NsiI | ATGCAT | 2 cut(s) | 994, 2973 |
| NspI | RCATGY | 8 cut(s) | 139, 1615, 1739, 2687, 2975, 3053, 4310, 5927 |
| NspV | TTCGAA | 1 cut(s) | 2798 |
| PaeI | GCATGC | 3 cut(s) | 2687, 2975, 4310 |
| PaeR7I | CTCGAG | 4 cut(s) | 2555, 4015, 4189, 5292 |
| PagI | TCATGA | 4 cut(s) | 457, 2878, 3279, 6024 |
| PasI | CCCWGGG | 1 cut(s) | 95 |
| PauI | GCGCGC | 2 cut(s) | 2906, 5815 |
| PceI | AGGCCT | 1 cut(s) | 4007 |
| PciI | ACATGT | 1 cut(s) | 3049 |
| PciSI | GCTCTTC | 1 cut(s) | 2026 |
| PctI | GAATGC | 2 cut(s) | 1121, 1447 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2607 |
| PflFI | GACNNNGTC | 2 cut(s) | 2375, 2588 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2341, 3193 |
| PinAI | ACCGGT | 2 cut(s) | 3800, 4926 |
| PleI | GAGTC | 7 cut(s) | 50, 62, 487, 1533, 1868, 4181, 4426 |
| PmaCI | CACGTG | 1 cut(s) | 2549 |
| PmlI | CACGTG | 1 cut(s) | 2549 |
| PpsI | GAGTC | 7 cut(s) | 50, 62, 487, 1533, 1868, 4181, 4426 |
| Ppu21I | YACGTR | 1 cut(s) | 2549 |
| PpuMI | RGGWCCY | 1 cut(s) | 3667 |
| PscI | ACATGT | 1 cut(s) | 3049 |
| PshAI | GACNNNNGTC | 1 cut(s) | 4053 |
| PshBI | ATTAAT | 3 cut(s) | 1035, 1896, 2282 |
| Psp124BI | GAGCTC | 4 cut(s) | 1137, 1207, 2002, 2038 |
| Psp1406I | AACGTT | 1 cut(s) | 5533 |
| Psp5II | RGGWCCY | 1 cut(s) | 3667 |
| Psp6I | CCWGG | 5 cut(s) | 94, 140, 889, 1662, 4816 |
| PspCI | CACGTG | 1 cut(s) | 2549 |
| PspEI | GGTNACC | 1 cut(s) | 5416 |
| PspFI | CCCAGC | 1 cut(s) | 5621 |
| PspGI | CCWGG | 5 cut(s) | 94, 140, 889, 1662, 4816 |
| PspPI | GGNCC | 9 cut(s) | 88, 254, 620, 1419, 2744, 3667, 4048, 4437, 5387 |
| PspPPI | RGGWCCY | 1 cut(s) | 3667 |
| PspXI | VCTCGAGB | 1 cut(s) | 4189 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3757, 3789 |
| PstI | CTGCAG | 5 cut(s) | 379, 3971, 4629, 5524, 5941 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1721 |
| PsuI | RGATCY | 8 cut(s) | 785, 2805, 3070, 3244, 3434, 3742, 3973, 6007 |
| PsyI | GACNNNGTC | 2 cut(s) | 2375, 2588 |
| PteI | GCGCGC | 2 cut(s) | 2906, 5815 |
| PvuII | CAGCTG | 2 cut(s) | 380, 5525 |
| RseI | CAYNNNNRTG | 4 cut(s) | 612, 2214, 5193, 5510 |
| SacI | GAGCTC | 4 cut(s) | 1137, 1207, 2002, 2038 |
| SapI | GCTCTTC | 1 cut(s) | 2026 |
| Sau96I | GGNCC | 9 cut(s) | 88, 254, 620, 1419, 2744, 3667, 4048, 4437, 5387 |
| ScaI | AGTACT | 3 cut(s) | 1273, 4564, 4982 |
| SchI | GAGTC | 7 cut(s) | 50, 62, 487, 1533, 1869, 4181, 4427 |
| SduI | GDGCHC | 6 cut(s) | 247, 1137, 1207, 2002, 2038, 5744 |
| SfcI | CTRYAG | 8 cut(s) | 375, 3659, 3967, 4124, 4199, 4625, 5520, 5937 |
| Sfr274I | CTCGAG | 4 cut(s) | 2555, 4015, 4189, 5292 |
| SfuI | TTCGAA | 1 cut(s) | 2798 |
| SinI | GGWCC | 6 cut(s) | 88, 254, 1419, 3667, 4048, 5387 |
| SlaI | CTCGAG | 4 cut(s) | 2555, 4015, 4189, 5292 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 612, 2214, 5193, 5510 |
| SphI | GCATGC | 3 cut(s) | 2687, 2975, 4310 |
| SseBI | AGGCCT | 1 cut(s) | 4007 |
| SsiI | CCGC | 8 cut(s) | 966, 1097, 2089, 2437, 2917, 3124, 5223, 5758 |
| SspI | AATATT | 4 cut(s) | 1849, 4387, 5784, 5854 |
| SstI | GAGCTC | 4 cut(s) | 1137, 1207, 2002, 2038 |
| StuI | AGGCCT | 1 cut(s) | 4007 |
| TaiI | ACGT | 4 cut(s) | 51, 879, 2551, 5536 |
| TaqII | GACCGA | 1 cut(s) | 239 |
| TatI | WGTACW | 8 cut(s) | 410, 560, 1271, 1487, 2047, 2177, 4562, 4980 |
| TauI | GCSGC | 2 cut(s) | 2920, 5226 |
| TseFI | GTSAC | 9 cut(s) | 65, 505, 1012, 1804, 2456, 2590, 3076, 4162, 5155 |
| Tsp45I | GTSAC | 9 cut(s) | 65, 505, 1012, 1804, 2456, 2590, 3076, 4162, 5155 |
| TspGWI | ACGGA | 6 cut(s) | 53, 180, 3811, 5006, 5342, 5904 |
| Tth111I | GACNNNGTC | 2 cut(s) | 2375, 2588 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2341, 3193 |
| Vha464I | CTTAAG | 1 cut(s) | 3632 |
| VpaK11BI | GGWCC | 6 cut(s) | 88, 254, 1419, 3667, 4048, 5387 |
| VspI | ATTAAT | 3 cut(s) | 1035, 1896, 2282 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1877 |
| XapI | RAATTY | 7 cut(s) | 1471, 1793, 2265, 3361, 3487, 4842, 5239 |
| XbaI | TCTAGA | 2 cut(s) | 1243, 5866 |
| XceI | RCATGY | 8 cut(s) | 139, 1615, 1739, 2687, 2975, 3053, 4310, 5927 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2190, 4484 |
| XhoI | CTCGAG | 4 cut(s) | 2555, 4015, 4189, 5292 |
| XmaJI | CCTAGG | 1 cut(s) | 3422 |
| XmiI | GTMKAC | 2 cut(s) | 1153, 5062 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2607 |
| ZrmI | AGTACT | 3 cut(s) | 1273, 4564, 4982 |
| Zsp2I | ATGCAT | 2 cut(s) | 994, 2973 |