U5 small nuclear ribonucleoprotein 200 kDa
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| BRR2_plug | PF21188 | 119 - 184 | 3.3e-11 | Pre-mRNA-splicing helicase BRR2 plug domain |
| Helicase_PWI | PF18149 | 273 - 383 | 5.6e-35 | N-terminal helicase PWI domain |
| ResIII | PF04851 | 512 - 687 | 6.5e-13 | Type III restriction enzyme, res subunit |
| DEAD | PF00270 | 513 - 691 | 2e-32 | DEAD/DEAH box helicase |
| Helicase_C | PF00271 | 800 - 890 | 8.7e-10 | Helicase conserved C-terminal domain |
| WHD_SNRNP200 | PF23445 | 921 - 997 | 4.1e-24 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 1013 - 1316 | 1.3e-99 | Sec63 Brl domain |
| DEAD | PF00270 | 1359 - 1531 | 2.4e-32 | DEAD/DEAH box helicase |
| ResIII | PF04851 | 1359 - 1518 | 5e-13 | Type III restriction enzyme, res subunit |
| WHD_SNRNP200 | PF23445 | 1759 - 1840 | 1.8e-38 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 1846 - 2163 | 3.1e-72 | Sec63 Brl domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1701 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1455 |
| Acc36I | ACCTGC | 2 cut(s) | 268, 1209 |
| Acc65I | GGTACC | 1 cut(s) | 4263 |
| AccB1I | GGYRCC | 3 cut(s) | 431, 4263, 4657 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 5083 |
| AccBSI | CCGCTC | 1 cut(s) | 241 |
| AccI | GTMKAC | 2 cut(s) | 1351, 3339 |
| AccII | CGCG | 6 cut(s) | 103, 1054, 2370, 5225, 5858, 6093 |
| AccIII | TCCGGA | 1 cut(s) | 1120 |
| AcoI | YGGCCR | 7 cut(s) | 315, 406, 450, 1059, 2707, 4332, 5113 |
| AcsI | RAATTY | 6 cut(s) | 998, 1941, 3161, 4923, 5643, 6398 |
| AcyI | GRCGYC | 1 cut(s) | 3361 |
| AdeI | CACNNNGTG | 2 cut(s) | 2569, 5483 |
| AfeI | AGCGCT | 2 cut(s) | 627, 4202 |
| AflII | CTTAAG | 2 cut(s) | 215, 2099 |
| AflIII | ACRYGT | 3 cut(s) | 1052, 3432, 4801 |
| AgeI | ACCGGT | 1 cut(s) | 6147 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 2796, 2828, 3462, 3494, 3518, 3550, 5813, 5845 |
| AleI | CACNNNNGTG | 1 cut(s) | 168 |
| Alw21I | GWGCWC | 7 cut(s) | 204, 930, 1052, 1600, 1635, 3376, 3699 |
| Alw44I | GTGCAC | 1 cut(s) | 1048 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 5812, 6124 |
| Ama87I | CYCGRG | 1 cut(s) | 70 |
| Aor13HI | TCCGGA | 1 cut(s) | 1120 |
| Aor51HI | AGCGCT | 2 cut(s) | 627, 4202 |
| ApaLI | GTGCAC | 1 cut(s) | 1048 |
| ApoI | RAATTY | 6 cut(s) | 998, 1941, 3161, 4923, 5643, 6398 |
| AsiGI | ACCGGT | 1 cut(s) | 6147 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1756, 2808, 3807, 5124 |
| Asp718I | GGTACC | 1 cut(s) | 4263 |
| AspLEI | GCGC | 9 cut(s) | 7, 34, 628, 1567, 1657, 4203, 4653, 5227, 6093 |
| AsuC2I | CCSGG | 8 cut(s) | 40, 176, 266, 4655, 5117, 6205, 6420, 6514 |
| AsuII | TTCGAA | 2 cut(s) | 1364, 4701 |
| AsuNHI | GCTAGC | 2 cut(s) | 3202, 4613 |
| AvaI | CYCGRG | 1 cut(s) | 70 |
| AvaII | GGWCC | 8 cut(s) | 244, 703, 1118, 3924, 4487, 4984, 5527, 5833 |
| AxyI | CCTNAGG | 1 cut(s) | 6281 |
| BaeGI | GKGCMC | 3 cut(s) | 1052, 2508, 4937 |
| BalI | TGGCCA | 3 cut(s) | 408, 1061, 2709 |
| BanI | GGYRCC | 3 cut(s) | 431, 4263, 4657 |
| BanII | GRGCYC | 8 cut(s) | 120, 204, 1504, 3258, 3376, 3409, 3699, 3876 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 5240, 5272 |
| BauI | CACGAG | 2 cut(s) | 113, 2298 |
| BbsI | GAAGAC | 5 cut(s) | 2361, 3356, 4087, 4163, 5627 |
| Bbv12I | GWGCWC | 7 cut(s) | 204, 930, 1052, 1600, 1635, 3376, 3699 |
| BceAI | ACGGC | 8 cut(s) | 330, 437, 590, 635, 3197, 4347, 4830, 5903 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 44, 61, 78, 95, 5848, 5882, 6386, 6420 |
| BciVI | GTATCC | 4 cut(s) | 2849, 3987, 6297, 6322 |
| BclI | TGATCA | 2 cut(s) | 538, 5449 |
| BcnI | CCSGG | 8 cut(s) | 40, 176, 266, 4655, 5117, 6205, 6420, 6514 |
| BfmI | CTRYAG | 5 cut(s) | 797, 2235, 4881, 5984, 6371 |
| BfoI | RGCGCY | 2 cut(s) | 629, 4204 |
| BfrI | CTTAAG | 2 cut(s) | 215, 2099 |
| BfuAI | ACCTGC | 2 cut(s) | 268, 1209 |
| BfuI | GTATCC | 4 cut(s) | 2849, 3987, 6297, 6322 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1160 |
| BglII | AGATCT | 2 cut(s) | 2419, 2589 |
| BlpI | GCTNAGC | 3 cut(s) | 380, 1503, 5909 |
| Bme18I | GGWCC | 8 cut(s) | 244, 703, 1118, 3924, 4487, 4984, 5527, 5833 |
| BmeT110I | CYCGRG | 1 cut(s) | 70 |
| BmrI | ACTGGG | 3 cut(s) | 1522, 3252, 4282 |
| BmtI | GCTAGC | 2 cut(s) | 3206, 4617 |
| BmuI | ACTGGG | 3 cut(s) | 1522, 3252, 4282 |
| BoxI | GACNNNNGTC | 2 cut(s) | 3045, 4091 |
| BpiI | GAAGAC | 5 cut(s) | 2361, 3356, 4087, 4163, 5627 |
| BpmI | CTGGAG | 5 cut(s) | 615, 2908, 3542, 4365, 5405 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2325, 4254 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 380, 1503, 5909 |
| Bpu14I | TTCGAA | 2 cut(s) | 1364, 4701 |
| BpuEI | CTTGAG | 3 cut(s) | 914, 3329, 4373 |
| BpuMI | CCSGG | 8 cut(s) | 40, 176, 266, 4655, 5117, 6205, 6420, 6514 |
| BsaAI | YACGTR | 2 cut(s) | 2509, 2885 |
| BsaBI | GATNNNNATC | 2 cut(s) | 3837, 4370 |
| BsaHI | GRCGYC | 1 cut(s) | 3361 |
| BsaI | GGTCTC | 5 cut(s) | 1441, 1890, 2006, 2659, 4301 |
| BsaWI | WCCGGW | 6 cut(s) | 1120, 1899, 3232, 3967, 5385, 6147 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1091, 1121, 4268, 4298, 4847, 4877 |
| Bse118I | RCCGGY | 4 cut(s) | 122, 1029, 1432, 6147 |
| Bse21I | CCTNAGG | 1 cut(s) | 6281 |
| Bse3DI | GCAATG | 6 cut(s) | 2183, 2413, 3051, 4725, 5883, 5905 |
| Bse8I | GATNNNNATC | 2 cut(s) | 3837, 4370 |
| BseAI | TCCGGA | 1 cut(s) | 1120 |
| BseJI | GATNNNNATC | 2 cut(s) | 3837, 4370 |
| BseMI | GCAATG | 6 cut(s) | 2183, 2413, 3051, 4725, 5883, 5905 |
| BseRI | GAGGAG | 5 cut(s) | 698, 1112, 2957, 4201, 6391 |
| BseSI | GKGCMC | 3 cut(s) | 1052, 2508, 4937 |
| BseYI | CCCAGC | 6 cut(s) | 1114, 1403, 5015, 5055, 5433, 5670 |
| BsgI | GTGCAG | 4 cut(s) | 2301, 2679, 3683, 4188 |
| Bsh1236I | CGCG | 6 cut(s) | 103, 1054, 2370, 5225, 5858, 6093 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3013 |
| BshNI | GGYRCC | 3 cut(s) | 431, 4263, 4657 |
| BshTI | ACCGGT | 1 cut(s) | 6147 |
| BsiEI | CGRYCG | 1 cut(s) | 3013 |
| BsiHKAI | GWGCWC | 7 cut(s) | 204, 930, 1052, 1600, 1635, 3376, 3699 |
| BsiHKCI | CYCGRG | 1 cut(s) | 70 |
| BslFI | GGGAC | 8 cut(s) | 257, 1262, 2121, 2126, 2596, 3910, 4473, 6203 |
| BsmBI | CGTCTC | 2 cut(s) | 1272, 2941 |
| BsmFI | GGGAC | 8 cut(s) | 257, 1262, 2121, 2126, 2596, 3910, 4473, 6203 |
| BsmI | GAATGC | 6 cut(s) | 256, 2803, 2833, 4768, 5264, 5317 |
| Bso31I | GGTCTC | 5 cut(s) | 1441, 1890, 2006, 2659, 4301 |
| BsoBI | CYCGRG | 1 cut(s) | 70 |
| Bsp119I | TTCGAA | 2 cut(s) | 1364, 4701 |
| Bsp13I | TCCGGA | 1 cut(s) | 1120 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 380, 1503, 5909 |
| Bsp19I | CCATGG | 3 cut(s) | 3076, 3117, 5928 |
| BspEI | TCCGGA | 1 cut(s) | 1120 |
| BspFNI | CGCG | 6 cut(s) | 103, 1054, 2370, 5225, 5858, 6093 |
| BspHI | TCATGA | 2 cut(s) | 295, 5037 |
| BspMAI | CTGCAG | 2 cut(s) | 801, 6375 |
| BspMI | ACCTGC | 2 cut(s) | 268, 1209 |
| BspOI | GCTAGC | 2 cut(s) | 3206, 4617 |
| BspQI | GCTCTTC | 1 cut(s) | 3246 |
| BspT104I | TTCGAA | 2 cut(s) | 1364, 4701 |
| BspT107I | GGYRCC | 3 cut(s) | 431, 4263, 4657 |
| BspTI | CTTAAG | 2 cut(s) | 215, 2099 |
| BspTNI | GGTCTC | 5 cut(s) | 1441, 1890, 2006, 2659, 4301 |
| BsrBI | CCGCTC | 1 cut(s) | 241 |
| BsrDI | GCAATG | 6 cut(s) | 2183, 2413, 3051, 4725, 5883, 5905 |
| BsrFI | RCCGGY | 4 cut(s) | 122, 1029, 1432, 6147 |
| BssAI | RCCGGY | 4 cut(s) | 122, 1029, 1432, 6147 |
| BssNI | GRCGYC | 1 cut(s) | 3361 |
| BssSI | CACGAG | 2 cut(s) | 113, 2298 |
| BssT1I | CCWWGG | 7 cut(s) | 348, 2335, 3076, 3117, 5928, 6291, 6384 |
| Bst2BI | CACGAG | 2 cut(s) | 113, 2298 |
| BstACI | GRCGYC | 1 cut(s) | 3361 |
| BstAFI | CTTAAG | 2 cut(s) | 215, 2099 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2537, 4175 |
| BstBAI | YACGTR | 2 cut(s) | 2509, 2885 |
| BstBI | TTCGAA | 2 cut(s) | 1364, 4701 |
| BstDSI | CCRYGG | 4 cut(s) | 606, 3076, 3117, 5928 |
| BstEII | GGTNACC | 2 cut(s) | 170, 1805 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3544 |
| BstFNI | CGCG | 6 cut(s) | 103, 1054, 2370, 5225, 5858, 6093 |
| BstH2I | RGCGCY | 2 cut(s) | 629, 4204 |
| BstHHI | GCGC | 9 cut(s) | 7, 34, 628, 1567, 1657, 4203, 4653, 5227, 6093 |
| BstMCI | CGRYCG | 1 cut(s) | 3013 |
| BstNSI | RCATGY | 6 cut(s) | 1154, 2881, 3436, 4430, 4757, 4805 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 3045, 4091 |
| BstPI | GGTNACC | 2 cut(s) | 170, 1805 |
| BstSFI | CTRYAG | 5 cut(s) | 797, 2235, 4881, 5984, 6371 |
| BstSLI | GKGCMC | 3 cut(s) | 1052, 2508, 4937 |
| BstSNI | TACGTA | 1 cut(s) | 2885 |
| BstUI | CGCG | 6 cut(s) | 103, 1054, 2370, 5225, 5858, 6093 |
| BstV2I | GAAGAC | 5 cut(s) | 2361, 3356, 4087, 4163, 5627 |
| BstX2I | RGATCY | 5 cut(s) | 2419, 2488, 2589, 4591, 4822 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 976, 3491, 4389, 4472 |
| BstYI | RGATCY | 5 cut(s) | 2419, 2488, 2589, 4591, 4822 |
| Bsu36I | CCTNAGG | 1 cut(s) | 6281 |
| BsuI | GTATCC | 4 cut(s) | 2849, 3987, 6297, 6322 |
| BtgI | CCRYGG | 4 cut(s) | 606, 3076, 3117, 5928 |
| BtsI | GCAGTG | 1 cut(s) | 1635 |
| BveI | ACCTGC | 2 cut(s) | 268, 1209 |
| CaiI | CAGNNNCTG | 2 cut(s) | 5812, 6124 |
| CciI | TCATGA | 2 cut(s) | 295, 5037 |
| CfoI | GCGC | 9 cut(s) | 7, 34, 628, 1567, 1657, 4203, 4653, 5227, 6093 |
| Cfr10I | RCCGGY | 4 cut(s) | 122, 1029, 1432, 6147 |
| CseI | GACGC | 4 cut(s) | 295, 373, 1289, 3350 |
| CspAI | ACCGGT | 1 cut(s) | 6147 |
| DraI | TTTAAA | 1 cut(s) | 5541 |
| DraIII | CACNNNGTG | 2 cut(s) | 2569, 5483 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1455 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1455 |
| EaeI | YGGCCR | 7 cut(s) | 315, 406, 450, 1059, 2707, 4332, 5113 |
| EciI | GGCGGA | 1 cut(s) | 3870 |
| Ecl136II | GAGCTC | 3 cut(s) | 202, 3374, 3697 |
| Eco105I | TACGTA | 1 cut(s) | 2885 |
| Eco130I | CCWWGG | 7 cut(s) | 348, 2335, 3076, 3117, 5928, 6291, 6384 |
| Eco24I | GRGCYC | 8 cut(s) | 120, 204, 1504, 3258, 3376, 3409, 3699, 3876 |
| Eco31I | GGTCTC | 5 cut(s) | 1441, 1890, 2006, 2659, 4301 |
| Eco32I | GATATC | 3 cut(s) | 867, 1876, 6499 |
| Eco47I | GGWCC | 8 cut(s) | 244, 703, 1118, 3924, 4487, 4984, 5527, 5833 |
| Eco47III | AGCGCT | 2 cut(s) | 627, 4202 |
| Eco53kI | GAGCTC | 3 cut(s) | 202, 3374, 3697 |
| Eco81I | CCTNAGG | 1 cut(s) | 6281 |
| Eco88I | CYCGRG | 1 cut(s) | 70 |
| Eco91I | GGTNACC | 2 cut(s) | 170, 1805 |
| EcoICRI | GAGCTC | 3 cut(s) | 202, 3374, 3697 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3544 |
| EcoO109I | RGGNCCY | 4 cut(s) | 244, 1264, 1967, 3924 |
| EcoO65I | GGTNACC | 2 cut(s) | 170, 1805 |
| EcoRV | GATATC | 3 cut(s) | 867, 1876, 6499 |
| EcoT14I | CCWWGG | 7 cut(s) | 348, 2335, 3076, 3117, 5928, 6291, 6384 |
| EcoT38I | GRGCYC | 8 cut(s) | 120, 204, 1504, 3258, 3376, 3409, 3699, 3876 |
| ErhI | CCWWGG | 7 cut(s) | 348, 2335, 3076, 3117, 5928, 6291, 6384 |
| Esp3I | CGTCTC | 2 cut(s) | 1272, 2941 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 5237, 5269 |
| FaqI | GGGAC | 8 cut(s) | 257, 1262, 2121, 2126, 2596, 3910, 4473, 6203 |
| FauI | CCCGC | 5 cut(s) | 108, 234, 3349, 4412, 6418 |
| FauNDI | CATATG | 2 cut(s) | 2431, 4163 |
| FbaI | TGATCA | 2 cut(s) | 538, 5449 |
| FblI | GTMKAC | 2 cut(s) | 1351, 3339 |
| FriOI | GRGCYC | 8 cut(s) | 120, 204, 1504, 3258, 3376, 3409, 3699, 3876 |
| GlaI | GCGC | 9 cut(s) | 6, 33, 627, 1566, 1656, 4202, 4652, 5226, 6092 |
| GsaI | CCCAGC | 6 cut(s) | 1118, 1407, 5019, 5059, 5437, 5674 |
| GsuI | CTGGAG | 5 cut(s) | 615, 2908, 3542, 4365, 5405 |
| HaeII | RGCGCY | 2 cut(s) | 629, 4204 |
| HgaI | GACGC | 4 cut(s) | 295, 373, 1289, 3350 |
| HhaI | GCGC | 9 cut(s) | 7, 34, 628, 1567, 1657, 4203, 4653, 5227, 6093 |
| Hin1I | GRCGYC | 1 cut(s) | 3361 |
| Hin6I | GCGC | 9 cut(s) | 5, 32, 626, 1565, 1655, 4201, 4651, 5225, 6091 |
| HinP1I | GCGC | 9 cut(s) | 5, 32, 626, 1565, 1655, 4201, 4651, 5225, 6091 |
| HincII | GTYRAC | 2 cut(s) | 3448, 4569 |
| HindII | GTYRAC | 2 cut(s) | 3448, 4569 |
| HindIII | AAGCTT | 8 cut(s) | 212, 873, 911, 1469, 2838, 3209, 3305, 4047 |
| HpaI | GTTAAC | 1 cut(s) | 3448 |
| Hpy166II | GTNNAC | 7 cut(s) | 982, 1050, 1352, 3340, 3448, 4569, 5128 |
| Hpy8I | GTNNAC | 7 cut(s) | 982, 1050, 1352, 3340, 3448, 4569, 5128 |
| Hpy99I | CGWCG | 1 cut(s) | 6527 |
| HpyCH4IV | ACGT | 4 cut(s) | 2508, 2884, 3171, 6238 |
| HpySE526I | ACGT | 4 cut(s) | 2508, 2884, 3171, 6238 |
| Hsp92I | GRCGYC | 1 cut(s) | 3361 |
| HspAI | GCGC | 9 cut(s) | 5, 32, 626, 1565, 1655, 4201, 4651, 5225, 6091 |
| KflI | GGGWCCC | 2 cut(s) | 244, 3924 |
| Kpn2I | TCCGGA | 1 cut(s) | 1120 |
| KpnI | GGTACC | 1 cut(s) | 4267 |
| KroI | GCCGGC | 1 cut(s) | 1432 |
| KroNI | GCCGGC | 1 cut(s) | 1434 |
| Ksp22I | TGATCA | 2 cut(s) | 538, 5449 |
| KspAI | GTTAAC | 1 cut(s) | 3448 |
| LguI | GCTCTTC | 1 cut(s) | 3246 |
| MaeII | ACGT | 4 cut(s) | 2508, 2884, 3171, 6238 |
| MbiI | CCGCTC | 1 cut(s) | 241 |
| MfeI | CAATTG | 3 cut(s) | 1134, 2845, 4743 |
| MflI | RGATCY | 5 cut(s) | 2419, 2488, 2589, 4591, 4822 |
| MlsI | TGGCCA | 3 cut(s) | 408, 1061, 2709 |
| MluI | ACGCGT | 1 cut(s) | 1052 |
| MluNI | TGGCCA | 3 cut(s) | 408, 1061, 2709 |
| MlyI | GAGTC | 9 cut(s) | 86, 1560, 1813, 2578, 4081, 4198, 4540, 4905, 5944 |
| MmeI | TCCRAC | 3 cut(s) | 1729, 5811, 6054 |
| Mox20I | TGGCCA | 3 cut(s) | 408, 1061, 2709 |
| MroI | TCCGGA | 1 cut(s) | 1120 |
| MroNI | GCCGGC | 1 cut(s) | 1432 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1756, 2808, 3807, 5124 |
| MscI | TGGCCA | 3 cut(s) | 408, 1061, 2709 |
| MslI | CAYNNNNRTG | 6 cut(s) | 168, 901, 3233, 3741, 3899, 6164 |
| Msp20I | TGGCCA | 3 cut(s) | 408, 1061, 2709 |
| MspA1I | CMGCKG | 7 cut(s) | 437, 1114, 2972, 3301, 4410, 5437, 6531 |
| MspCI | CTTAAG | 2 cut(s) | 215, 2099 |
| MunI | CAATTG | 3 cut(s) | 1134, 2845, 4743 |
| Mva1269I | GAATGC | 6 cut(s) | 256, 2803, 2833, 4768, 5264, 5317 |
| MvnI | CGCG | 6 cut(s) | 103, 1054, 2370, 5225, 5858, 6093 |
| NaeI | GCCGGC | 1 cut(s) | 1434 |
| NciI | CCSGG | 8 cut(s) | 40, 176, 266, 4655, 5117, 6205, 6420, 6514 |
| NcoI | CCATGG | 3 cut(s) | 3076, 3117, 5928 |
| NdeI | CATATG | 2 cut(s) | 2431, 4163 |
| NgoMIV | GCCGGC | 1 cut(s) | 1432 |
| NheI | GCTAGC | 2 cut(s) | 3202, 4613 |
| NspI | RCATGY | 6 cut(s) | 1154, 2881, 3436, 4430, 4757, 4805 |
| NspV | TTCGAA | 2 cut(s) | 1364, 4701 |
| OliI | CACNNNNGTG | 1 cut(s) | 168 |
| PacI | TTAATTAA | 1 cut(s) | 5718 |
| PaeI | GCATGC | 2 cut(s) | 1154, 4757 |
| PaeR7I | CTCGAG | 1 cut(s) | 70 |
| PagI | TCATGA | 2 cut(s) | 295, 5037 |
| PciI | ACATGT | 2 cut(s) | 3432, 4801 |
| PciSI | GCTCTTC | 1 cut(s) | 3246 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 2226, 2881 |
| PctI | GAATGC | 6 cut(s) | 256, 2803, 2833, 4768, 5264, 5317 |
| PdiI | GCCGGC | 1 cut(s) | 1434 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1756, 2808, 3807, 5124 |
| PflFI | GACNNNGTC | 1 cut(s) | 4124 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 5083 |
| PfoI | TCCNGGA | 2 cut(s) | 705, 6034 |
| PinAI | ACCGGT | 1 cut(s) | 6147 |
| PleI | GAGTC | 9 cut(s) | 86, 1559, 1813, 2578, 4081, 4197, 4539, 4905, 5944 |
| PpsI | GAGTC | 9 cut(s) | 86, 1559, 1813, 2578, 4081, 4197, 4539, 4905, 5944 |
| Ppu21I | YACGTR | 2 cut(s) | 2509, 2885 |
| PpuMI | RGGWCCY | 2 cut(s) | 244, 3924 |
| PscI | ACATGT | 2 cut(s) | 3432, 4801 |
| PshAI | GACNNNNGTC | 2 cut(s) | 3045, 4091 |
| PsiI | TTATAA | 1 cut(s) | 1701 |
| Psp124BI | GAGCTC | 3 cut(s) | 204, 3376, 3699 |
| Psp5II | RGGWCCY | 2 cut(s) | 244, 3924 |
| PspEI | GGTNACC | 2 cut(s) | 170, 1805 |
| PspFI | CCCAGC | 6 cut(s) | 1114, 1403, 5015, 5055, 5433, 5670 |
| PspPPI | RGGWCCY | 2 cut(s) | 244, 3924 |
| PspXI | VCTCGAGB | 1 cut(s) | 70 |
| PstI | CTGCAG | 2 cut(s) | 801, 6375 |
| PstNI | CAGNNNCTG | 2 cut(s) | 5812, 6124 |
| PsuI | RGATCY | 5 cut(s) | 2419, 2488, 2589, 4591, 4822 |
| PsyI | GACNNNGTC | 1 cut(s) | 4124 |
| PvuII | CAGCTG | 2 cut(s) | 1114, 3301 |
| RseI | CAYNNNNRTG | 6 cut(s) | 168, 901, 3233, 3741, 3899, 6164 |
| SacI | GAGCTC | 3 cut(s) | 204, 3376, 3699 |
| SapI | GCTCTTC | 1 cut(s) | 3246 |
| SchI | GAGTC | 9 cut(s) | 86, 1560, 1813, 2578, 4081, 4198, 4540, 4905, 5944 |
| SfcI | CTRYAG | 5 cut(s) | 797, 2235, 4881, 5984, 6371 |
| Sfr274I | CTCGAG | 1 cut(s) | 70 |
| SfuI | TTCGAA | 2 cut(s) | 1364, 4701 |
| SgrAI | CRCCGGYG | 1 cut(s) | 122 |
| SinI | GGWCC | 8 cut(s) | 244, 703, 1118, 3924, 4487, 4984, 5527, 5833 |
| SlaI | CTCGAG | 1 cut(s) | 70 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 168, 901, 3233, 3741, 3899, 6164 |
| SmlI | CTYRAG | 6 cut(s) | 70, 215, 929, 2099, 3308, 4352 |
| SmoI | CTYRAG | 6 cut(s) | 70, 215, 929, 2099, 3308, 4352 |
| SnaBI | TACGTA | 1 cut(s) | 2885 |
| SphI | GCATGC | 2 cut(s) | 1154, 4757 |
| SspI | AATATT | 1 cut(s) | 3806 |
| SstI | GAGCTC | 3 cut(s) | 204, 3376, 3699 |
| StyI | CCWWGG | 7 cut(s) | 348, 2335, 3076, 3117, 5928, 6291, 6384 |
| TaiI | ACGT | 4 cut(s) | 2511, 2887, 3174, 6241 |
| TaqII | GACCGA | 1 cut(s) | 3027 |
| TspGWI | ACGGA | 2 cut(s) | 4026, 6272 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4124 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 5083 |
| Vha464I | CTTAAG | 2 cut(s) | 215, 2099 |
| VneI | GTGCAC | 1 cut(s) | 1048 |
| VpaK11BI | GGWCC | 8 cut(s) | 244, 703, 1118, 3924, 4487, 4984, 5527, 5833 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3544 |
| XapI | RAATTY | 6 cut(s) | 998, 1941, 3161, 4923, 5643, 6398 |
| XbaI | TCTAGA | 1 cut(s) | 4511 |
| XceI | RCATGY | 6 cut(s) | 1154, 2881, 3436, 4430, 4757, 4805 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 3717, 4472, 6032 |
| XhoI | CTCGAG | 1 cut(s) | 70 |
| XmiI | GTMKAC | 2 cut(s) | 1351, 3339 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1756, 2808, 3807, 5124 |