U5 small nuclear ribonucleoprotein 200 kDa
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| BRR2_plug | PF21188 | 109 - 171 | 2.7e-07 | Pre-mRNA-splicing helicase BRR2 plug domain |
| Helicase_PWI | PF18149 | 251 - 360 | 7.5e-29 | N-terminal helicase PWI domain |
| ResIII | PF04851 | 480 - 634 | 7.6e-06 | Type III restriction enzyme, res subunit |
| DEAD | PF00270 | 482 - 638 | 2.3e-19 | DEAD/DEAH box helicase |
| Helicase_C | PF00271 | 734 - 836 | 1.6e-10 | Helicase conserved C-terminal domain |
| WHD_SNRNP200 | PF23445 | 867 - 943 | 1.4e-21 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 959 - 1226 | 8.6e-84 | Sec63 Brl domain |
| ResIII | PF04851 | 1275 - 1420 | 2e-09 | Type III restriction enzyme, res subunit |
| DEAD | PF00270 | 1278 - 1452 | 1e-26 | DEAD/DEAH box helicase |
| WHD_SNRNP200 | PF23445 | 1669 - 1750 | 2.3e-34 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 1756 - 2075 | 1.6e-57 | Sec63 Brl domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 6089, 6134, 6174 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1622, 6080 |
| Acc36I | ACCTGC | 1 cut(s) | 3727 |
| Acc65I | GGTACC | 1 cut(s) | 6018 |
| AccB1I | GGYRCC | 4 cut(s) | 201, 401, 3198, 6018 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 4828, 5634 |
| AccBSI | CCGCTC | 1 cut(s) | 20 |
| AccI | GTMKAC | 3 cut(s) | 865, 4297, 5309 |
| AccII | CGCG | 6 cut(s) | 32, 34, 144, 210, 3060, 4955 |
| AclI | AACGTT | 1 cut(s) | 4071 |
| AclWI | GGATC | 8 cut(s) | 51, 1221, 2334, 2429, 2794, 4737, 5265, 5428 |
| AcoI | YGGCCR | 2 cut(s) | 2545, 5856 |
| AcsI | RAATTY | 8 cut(s) | 466, 475, 1782, 2999, 3530, 4046, 4597, 5942 |
| AcuI | CTGAAG | 8 cut(s) | 870, 1535, 3161, 3267, 3987, 5067, 5501, 5816 |
| AcvI | CACGTG | 3 cut(s) | 104, 115, 355 |
| AcyI | GRCGYC | 6 cut(s) | 83, 250, 297, 402, 1919, 3199 |
| AdeI | CACNNNGTG | 1 cut(s) | 2407 |
| AflIII | ACRYGT | 2 cut(s) | 2703, 4558 |
| AhlI | ACTAGT | 1 cut(s) | 4198 |
| AjiI | CACGTC | 1 cut(s) | 6010 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2634, 2666, 3300, 3332 |
| AleI | CACNNNNGTG | 1 cut(s) | 832 |
| Alw21I | GWGCWC | 6 cut(s) | 276, 1507, 1542, 3214, 3540, 3959 |
| AlwI | GGATC | 8 cut(s) | 51, 1221, 2334, 2429, 2794, 4737, 5265, 5428 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 2205, 4337, 5677, 6155 |
| Ama87I | CYCGRG | 4 cut(s) | 214, 327, 4115, 5963 |
| AoxI | GGCC | 7 cut(s) | 191, 308, 1807, 2545, 5520, 5856, 5931 |
| ApoI | RAATTY | 8 cut(s) | 466, 475, 1782, 2999, 3530, 4046, 4597, 5942 |
| AseI | ATTAAT | 2 cut(s) | 1572, 3108 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2646, 3426, 5880 |
| Asp718I | GGTACC | 1 cut(s) | 6018 |
| AspLEI | GCGC | 4 cut(s) | 34, 404, 3201, 4957 |
| AsuC2I | CCSGG | 6 cut(s) | 224, 328, 329, 1811, 5935, 6128 |
| AsuNHI | GCTAGC | 1 cut(s) | 844 |
| AvaI | CYCGRG | 4 cut(s) | 214, 327, 4115, 5963 |
| AvaII | GGWCC | 9 cut(s) | 73, 1049, 2421, 3055, 3466, 3675, 3706, 4354, 5563 |
| BaeGI | GKGCMC | 1 cut(s) | 120 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 202, 235 |
| BalI | TGGCCA | 2 cut(s) | 2547, 5858 |
| BanI | GGYRCC | 4 cut(s) | 201, 401, 3198, 6018 |
| BanII | GRGCYC | 3 cut(s) | 3096, 3214, 3540 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4970, 5002 |
| BbrPI | CACGTG | 3 cut(s) | 104, 115, 355 |
| BbsI | GAAGAC | 8 cut(s) | 297, 320, 2199, 2509, 3841, 3917, 5357, 6042 |
| Bbv12I | GWGCWC | 6 cut(s) | 276, 1507, 1542, 3214, 3540, 3959 |
| BbvCI | CCTCAGC | 1 cut(s) | 4017 |
| BceAI | ACGGC | 5 cut(s) | 263, 310, 415, 4795, 6180 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3080, 3114 |
| BciVI | GTATCC | 1 cut(s) | 2855 |
| BclI | TGATCA | 6 cut(s) | 499, 525, 2626, 2838, 3808, 5179 |
| BcnI | CCSGG | 6 cut(s) | 224, 328, 329, 1811, 5935, 6128 |
| BcuI | ACTAGT | 1 cut(s) | 4198 |
| BfmI | CTRYAG | 6 cut(s) | 2073, 4972, 5205, 5369, 5714, 6147 |
| BfoI | RGCGCY | 2 cut(s) | 405, 3202 |
| BfuAI | ACCTGC | 1 cut(s) | 3727 |
| BfuI | GTATCC | 1 cut(s) | 2855 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 199 |
| BglII | AGATCT | 1 cut(s) | 3814 |
| Bme18I | GGWCC | 9 cut(s) | 73, 1049, 2421, 3055, 3466, 3675, 3706, 4354, 5563 |
| BmeT110I | CYCGRG | 4 cut(s) | 214, 327, 4115, 5963 |
| BmgBI | CACGTC | 1 cut(s) | 6010 |
| BmrI | ACTGGG | 6 cut(s) | 790, 1521, 3090, 4095, 4840, 5986 |
| BmtI | GCTAGC | 1 cut(s) | 848 |
| BmuI | ACTGGG | 6 cut(s) | 790, 1521, 3090, 4095, 4840, 5986 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2883, 4268 |
| BpiI | GAAGAC | 8 cut(s) | 297, 320, 2199, 2509, 3841, 3917, 5357, 6042 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 4044, 4076 |
| BpmI | CTGGAG | 4 cut(s) | 4128, 4383, 5135, 5933 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3671, 4017 |
| BpuEI | CTTGAG | 3 cut(s) | 2095, 5173, 5367 |
| BpuMI | CCSGG | 6 cut(s) | 224, 328, 329, 1811, 5935, 6128 |
| Bsa29I | ATCGAT | 1 cut(s) | 4762 |
| BsaAI | YACGTR | 3 cut(s) | 104, 115, 355 |
| BsaBI | GATNNNNATC | 2 cut(s) | 3813, 5262 |
| BsaHI | GRCGYC | 6 cut(s) | 83, 250, 297, 402, 1919, 3199 |
| BsaI | GGTCTC | 2 cut(s) | 1847, 4064 |
| BsaWI | WCCGGW | 2 cut(s) | 918, 3550 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 585, 615, 693, 723, 1022, 1052 |
| Bse118I | RCCGGY | 2 cut(s) | 382, 1339 |
| Bse3DI | GCAATG | 5 cut(s) | 1236, 2251, 2889, 3993, 5613 |
| Bse8I | GATNNNNATC | 2 cut(s) | 3813, 5262 |
| BseCI | ATCGAT | 1 cut(s) | 4762 |
| BseJI | GATNNNNATC | 2 cut(s) | 3813, 5262 |
| BseMI | GCAATG | 5 cut(s) | 1236, 2251, 2889, 3993, 5613 |
| BseSI | GKGCMC | 1 cut(s) | 120 |
| BseYI | CCCAGC | 4 cut(s) | 119, 998, 1163, 4721 |
| BsgI | GTGCAG | 7 cut(s) | 806, 1550, 2139, 2517, 3213, 3876, 3942 |
| Bsh1236I | CGCG | 6 cut(s) | 32, 34, 144, 210, 3060, 4955 |
| BshFI | GGCC | 7 cut(s) | 193, 310, 1809, 2547, 5522, 5858, 5933 |
| BshNI | GGYRCC | 4 cut(s) | 201, 401, 3198, 6018 |
| BshVI | ATCGAT | 1 cut(s) | 4762 |
| BsiHKAI | GWGCWC | 6 cut(s) | 276, 1507, 1542, 3214, 3540, 3959 |
| BsiHKCI | CYCGRG | 4 cut(s) | 214, 327, 4115, 5963 |
| BsiSI | CCGG | 9 cut(s) | 224, 328, 383, 919, 1340, 1811, 3551, 5934, 6128 |
| BsiWI | CGTACG | 1 cut(s) | 336 |
| BslFI | GGGAC | 6 cut(s) | 1017, 1727, 2434, 2975, 3719, 4169 |
| BsmBI | CGTCTC | 2 cut(s) | 1699, 5837 |
| BsmFI | GGGAC | 6 cut(s) | 1017, 1727, 2434, 2975, 3719, 4169 |
| BsmI | GAATGC | 3 cut(s) | 2641, 2671, 4994 |
| BsnI | GGCC | 7 cut(s) | 193, 310, 1809, 2547, 5522, 5858, 5933 |
| Bso31I | GGTCTC | 2 cut(s) | 1847, 4064 |
| BsoBI | CYCGRG | 4 cut(s) | 214, 327, 4115, 5963 |
| Bsp1286I | GDGCHC | 8 cut(s) | 120, 276, 1507, 1542, 3096, 3214, 3540, 3959 |
| Bsp1407I | TGTACA | 3 cut(s) | 2104, 2347, 3990 |
| Bsp19I | CCATGG | 1 cut(s) | 4098 |
| BspANI | GGCC | 7 cut(s) | 193, 310, 1809, 2547, 5522, 5858, 5933 |
| BspDI | ATCGAT | 1 cut(s) | 4762 |
| BspFNI | CGCG | 6 cut(s) | 32, 34, 144, 210, 3060, 4955 |
| BspHI | TCATGA | 1 cut(s) | 763 |
| BspMAI | CTGCAG | 2 cut(s) | 5373, 6151 |
| BspMI | ACCTGC | 1 cut(s) | 3727 |
| BspOI | GCTAGC | 1 cut(s) | 848 |
| BspPI | GGATC | 8 cut(s) | 51, 1221, 2334, 2429, 2794, 4737, 5265, 5428 |
| BspQI | GCTCTTC | 2 cut(s) | 3947, 5655 |
| BspT107I | GGYRCC | 4 cut(s) | 201, 401, 3198, 6018 |
| BspTNI | GGTCTC | 2 cut(s) | 1847, 4064 |
| BsrBI | CCGCTC | 1 cut(s) | 20 |
| BsrDI | GCAATG | 5 cut(s) | 1236, 2251, 2889, 3993, 5613 |
| BsrFI | RCCGGY | 2 cut(s) | 382, 1339 |
| BsrGI | TGTACA | 3 cut(s) | 2104, 2347, 3990 |
| BssAI | RCCGGY | 2 cut(s) | 382, 1339 |
| BssNAI | GTATAC | 2 cut(s) | 866, 5310 |
| BssNI | GRCGYC | 6 cut(s) | 83, 250, 297, 402, 1919, 3199 |
| BssT1I | CCWWGG | 4 cut(s) | 2173, 4098, 4357, 5275 |
| Bst1107I | GTATAC | 2 cut(s) | 866, 5310 |
| BstACI | GRCGYC | 6 cut(s) | 83, 250, 297, 402, 1919, 3199 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2375, 3929, 5575 |
| BstAUI | TGTACA | 3 cut(s) | 2104, 2347, 3990 |
| BstBAI | YACGTR | 3 cut(s) | 104, 115, 355 |
| BstDSI | CCRYGG | 2 cut(s) | 142, 4098 |
| BstEII | GGTNACC | 2 cut(s) | 374, 1646 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3385 |
| BstFNI | CGCG | 6 cut(s) | 32, 34, 144, 210, 3060, 4955 |
| BstH2I | RGCGCY | 2 cut(s) | 405, 3202 |
| BstHHI | GCGC | 4 cut(s) | 34, 404, 3201, 4957 |
| BstNSI | RCATGY | 7 cut(s) | 1871, 2348, 2707, 2719, 4494, 4514, 4562 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2883, 4268 |
| BstPI | GGTNACC | 2 cut(s) | 374, 1646 |
| BstSFI | CTRYAG | 6 cut(s) | 2073, 4972, 5205, 5369, 5714, 6147 |
| BstSLI | GKGCMC | 1 cut(s) | 120 |
| BstUI | CGCG | 6 cut(s) | 32, 34, 144, 210, 3060, 4955 |
| BstV2I | GAAGAC | 8 cut(s) | 297, 320, 2199, 2509, 3841, 3917, 5357, 6042 |
| BstX2I | RGATCY | 3 cut(s) | 2326, 3814, 5257 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 907, 3329, 4152 |
| BstYI | RGATCY | 3 cut(s) | 2326, 3814, 5257 |
| BstZ17I | GTATAC | 2 cut(s) | 866, 5310 |
| Bsu15I | ATCGAT | 1 cut(s) | 4762 |
| BsuI | GTATCC | 1 cut(s) | 2855 |
| BsuRI | GGCC | 7 cut(s) | 193, 310, 1809, 2547, 5522, 5858, 5933 |
| BsuTUI | ATCGAT | 1 cut(s) | 4762 |
| BtgI | CCRYGG | 2 cut(s) | 142, 4098 |
| BtgZI | GCGATG | 1 cut(s) | 359 |
| BtrI | CACGTC | 1 cut(s) | 6010 |
| BtsI | GCAGTG | 6 cut(s) | 276, 1542, 2227, 2364, 3852, 4494 |
| BveI | ACCTGC | 1 cut(s) | 3727 |
| CaiI | CAGNNNCTG | 4 cut(s) | 2205, 4337, 5677, 6155 |
| CciI | TCATGA | 1 cut(s) | 763 |
| CfoI | GCGC | 4 cut(s) | 34, 404, 3201, 4957 |
| Cfr10I | RCCGGY | 2 cut(s) | 382, 1339 |
| Cfr42I | CCGCGG | 1 cut(s) | 145 |
| Cfr9I | CCCGGG | 1 cut(s) | 327 |
| ClaI | ATCGAT | 1 cut(s) | 4762 |
| CseI | GACGC | 6 cut(s) | 72, 239, 286, 1908, 5090, 5134 |
| DinI | GGCGCC | 2 cut(s) | 403, 3200 |
| DraI | TTTAAA | 2 cut(s) | 2946, 4756 |
| DraIII | CACNNNGTG | 1 cut(s) | 2407 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1622, 6080 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1622, 6080 |
| EaeI | YGGCCR | 2 cut(s) | 2545, 5856 |
| EciI | GGCGGA | 3 cut(s) | 714, 1862, 4263 |
| Ecl136II | GAGCTC | 2 cut(s) | 3212, 3538 |
| Eco130I | CCWWGG | 4 cut(s) | 2173, 4098, 4357, 5275 |
| Eco24I | GRGCYC | 3 cut(s) | 3096, 3214, 3540 |
| Eco31I | GGTCTC | 2 cut(s) | 1847, 4064 |
| Eco32I | GATATC | 1 cut(s) | 5035 |
| Eco47I | GGWCC | 9 cut(s) | 73, 1049, 2421, 3055, 3466, 3675, 3706, 4354, 5563 |
| Eco53kI | GAGCTC | 2 cut(s) | 3212, 3538 |
| Eco57I | CTGAAG | 8 cut(s) | 870, 1535, 3161, 3267, 3987, 5067, 5501, 5816 |
| Eco72I | CACGTG | 3 cut(s) | 104, 115, 355 |
| Eco88I | CYCGRG | 4 cut(s) | 214, 327, 4115, 5963 |
| Eco91I | GGTNACC | 2 cut(s) | 374, 1646 |
| EcoICRI | GAGCTC | 2 cut(s) | 3212, 3538 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3385 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1049, 3706, 4354 |
| EcoO65I | GGTNACC | 2 cut(s) | 374, 1646 |
| EcoRI | GAATTC | 2 cut(s) | 475, 5942 |
| EcoRV | GATATC | 1 cut(s) | 5035 |
| EcoT14I | CCWWGG | 4 cut(s) | 2173, 4098, 4357, 5275 |
| EcoT22I | ATGCAT | 1 cut(s) | 3825 |
| EcoT38I | GRGCYC | 3 cut(s) | 3096, 3214, 3540 |
| EgeI | GGCGCC | 2 cut(s) | 403, 3200 |
| EheI | GGCGCC | 2 cut(s) | 403, 3200 |
| ErhI | CCWWGG | 4 cut(s) | 2173, 4098, 4357, 5275 |
| Esp3I | CGTCTC | 2 cut(s) | 1699, 5837 |
| FaqI | GGGAC | 6 cut(s) | 1017, 1727, 2434, 2975, 3719, 4169 |
| FauI | CCCGC | 3 cut(s) | 688, 2128, 4920 |
| FauNDI | CATATG | 2 cut(s) | 2269, 3917 |
| FbaI | TGATCA | 6 cut(s) | 499, 525, 2626, 2838, 3808, 5179 |
| FblI | GTMKAC | 3 cut(s) | 865, 4297, 5309 |
| FriOI | GRGCYC | 3 cut(s) | 3096, 3214, 3540 |
| GlaI | GCGC | 4 cut(s) | 33, 403, 3200, 4956 |
| GsaI | CCCAGC | 4 cut(s) | 123, 1002, 1167, 4725 |
| GsuI | CTGGAG | 4 cut(s) | 4128, 4383, 5135, 5933 |
| HaeII | RGCGCY | 2 cut(s) | 405, 3202 |
| HaeIII | GGCC | 7 cut(s) | 193, 310, 1809, 2547, 5522, 5858, 5933 |
| HapII | CCGG | 9 cut(s) | 224, 328, 383, 919, 1340, 1811, 3551, 5934, 6128 |
| HgaI | GACGC | 6 cut(s) | 72, 239, 286, 1908, 5090, 5134 |
| HhaI | GCGC | 4 cut(s) | 34, 404, 3201, 4957 |
| Hin1I | GRCGYC | 6 cut(s) | 83, 250, 297, 402, 1919, 3199 |
| Hin6I | GCGC | 4 cut(s) | 32, 402, 3199, 4955 |
| HinP1I | GCGC | 4 cut(s) | 32, 402, 3199, 4955 |
| HincII | GTYRAC | 5 cut(s) | 1174, 2691, 4033, 4298, 6117 |
| HindII | GTYRAC | 5 cut(s) | 1174, 2691, 4033, 4298, 6117 |
| HindIII | AAGCTT | 7 cut(s) | 163, 1763, 2676, 3143, 4748, 5385, 6068 |
| HpaI | GTTAAC | 1 cut(s) | 2691 |
| HpaII | CCGG | 9 cut(s) | 224, 328, 383, 919, 1340, 1811, 3551, 5934, 6128 |
| Hpy99I | CGWCG | 8 cut(s) | 255, 286, 302, 413, 551, 554, 557, 6166 |
| HpyCH4IV | ACGT | 6 cut(s) | 103, 114, 354, 4071, 4542, 6009 |
| HpySE526I | ACGT | 6 cut(s) | 103, 114, 354, 4071, 4542, 6009 |
| Hsp92I | GRCGYC | 6 cut(s) | 83, 250, 297, 402, 1919, 3199 |
| HspAI | GCGC | 4 cut(s) | 32, 402, 3199, 4955 |
| KasI | GGCGCC | 2 cut(s) | 401, 3198 |
| KpnI | GGTACC | 1 cut(s) | 6022 |
| KroI | GCCGGC | 2 cut(s) | 382, 1339 |
| KroNI | GCCGGC | 2 cut(s) | 384, 1341 |
| Ksp22I | TGATCA | 6 cut(s) | 499, 525, 2626, 2838, 3808, 5179 |
| KspAI | GTTAAC | 1 cut(s) | 2691 |
| KspI | CCGCGG | 1 cut(s) | 145 |
| LguI | GCTCTTC | 2 cut(s) | 3947, 5655 |
| MaeII | ACGT | 6 cut(s) | 103, 114, 354, 4071, 4542, 6009 |
| MbiI | CCGCTC | 1 cut(s) | 20 |
| MfeI | CAATTG | 6 cut(s) | 1065, 2630, 3066, 4011, 4500, 5012 |
| MflI | RGATCY | 3 cut(s) | 2326, 3814, 5257 |
| MhlI | GDGCHC | 8 cut(s) | 120, 276, 1507, 1542, 3096, 3214, 3540, 3959 |
| MlsI | TGGCCA | 2 cut(s) | 2547, 5858 |
| MluNI | TGGCCA | 2 cut(s) | 2547, 5858 |
| Mly113I | GGCGCC | 2 cut(s) | 402, 3199 |
| MlyI | GAGTC | 8 cut(s) | 86, 143, 1402, 1426, 1654, 1675, 5696, 6068 |
| MmeI | TCCRAC | 4 cut(s) | 114, 2757, 4588, 5081 |
| Mox20I | TGGCCA | 2 cut(s) | 2547, 5858 |
| Mph1103I | ATGCAT | 1 cut(s) | 3825 |
| MroNI | GCCGGC | 2 cut(s) | 382, 1339 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2646, 3426, 5880 |
| MscI | TGGCCA | 2 cut(s) | 2547, 5858 |
| MslI | CAYNNNNRTG | 2 cut(s) | 832, 3582 |
| Msp20I | TGGCCA | 2 cut(s) | 2547, 5858 |
| MspA1I | CMGCKG | 6 cut(s) | 123, 144, 367, 1061, 2135, 3139 |
| MspI | CCGG | 9 cut(s) | 224, 328, 383, 919, 1340, 1811, 3551, 5934, 6128 |
| MunI | CAATTG | 6 cut(s) | 1065, 2630, 3066, 4011, 4500, 5012 |
| Mva1269I | GAATGC | 3 cut(s) | 2641, 2671, 4994 |
| MvnI | CGCG | 6 cut(s) | 32, 34, 144, 210, 3060, 4955 |
| NaeI | GCCGGC | 2 cut(s) | 384, 1341 |
| NarI | GGCGCC | 2 cut(s) | 402, 3199 |
| NciI | CCSGG | 6 cut(s) | 224, 328, 329, 1811, 5935, 6128 |
| NcoI | CCATGG | 1 cut(s) | 4098 |
| NdeI | CATATG | 2 cut(s) | 2269, 3917 |
| NgoMIV | GCCGGC | 2 cut(s) | 382, 1339 |
| NheI | GCTAGC | 1 cut(s) | 844 |
| NsiI | ATGCAT | 1 cut(s) | 3825 |
| NspI | RCATGY | 7 cut(s) | 1871, 2348, 2707, 2719, 4494, 4514, 4562 |
| OliI | CACNNNNGTG | 1 cut(s) | 832 |
| PaeI | GCATGC | 1 cut(s) | 2719 |
| PaeR7I | CTCGAG | 2 cut(s) | 4115, 5963 |
| PagI | TCATGA | 1 cut(s) | 763 |
| PasI | CCCWGGG | 1 cut(s) | 5683 |
| PciI | ACATGT | 2 cut(s) | 2703, 4558 |
| PciSI | GCTCTTC | 2 cut(s) | 3947, 5655 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 405, 543, 552 |
| PctI | GAATGC | 3 cut(s) | 2641, 2671, 4994 |
| PdiI | GCCGGC | 2 cut(s) | 384, 1341 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2646, 3426, 5880 |
| Pfl23II | CGTACG | 1 cut(s) | 336 |
| PflFI | GACNNNGTC | 2 cut(s) | 296, 4607 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 4828, 5634 |
| PfoI | TCCNGGA | 1 cut(s) | 5764 |
| PleI | GAGTC | 8 cut(s) | 86, 142, 1402, 1426, 1654, 1675, 5696, 6068 |
| PluTI | GGCGCC | 2 cut(s) | 405, 3202 |
| PmaCI | CACGTG | 3 cut(s) | 104, 115, 355 |
| PmlI | CACGTG | 3 cut(s) | 104, 115, 355 |
| PpsI | GAGTC | 8 cut(s) | 86, 142, 1402, 1426, 1654, 1675, 5696, 6068 |
| Ppu21I | YACGTR | 3 cut(s) | 104, 115, 355 |
| PpuMI | RGGWCCY | 3 cut(s) | 1049, 3706, 4354 |
| PscI | ACATGT | 2 cut(s) | 2703, 4558 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2883, 4268 |
| PshBI | ATTAAT | 2 cut(s) | 1572, 3108 |
| PsiI | TTATAA | 3 cut(s) | 6089, 6134, 6174 |
| Psp124BI | GAGCTC | 2 cut(s) | 3214, 3540 |
| Psp1406I | AACGTT | 1 cut(s) | 4071 |
| Psp5II | RGGWCCY | 3 cut(s) | 1049, 3706, 4354 |
| PspCI | CACGTG | 3 cut(s) | 104, 115, 355 |
| PspEI | GGTNACC | 2 cut(s) | 374, 1646 |
| PspFI | CCCAGC | 4 cut(s) | 119, 998, 1163, 4721 |
| PspLI | CGTACG | 1 cut(s) | 336 |
| PspPPI | RGGWCCY | 3 cut(s) | 1049, 3706, 4354 |
| PspXI | VCTCGAGB | 1 cut(s) | 4115 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 5394, 5426 |
| PstI | CTGCAG | 2 cut(s) | 5373, 6151 |
| PstNI | CAGNNNCTG | 4 cut(s) | 2205, 4337, 5677, 6155 |
| PsuI | RGATCY | 3 cut(s) | 2326, 3814, 5257 |
| PsyI | GACNNNGTC | 2 cut(s) | 296, 4607 |
| PvuII | CAGCTG | 3 cut(s) | 367, 1061, 3139 |
| RseI | CAYNNNNRTG | 2 cut(s) | 832, 3582 |
| SacI | GAGCTC | 2 cut(s) | 3214, 3540 |
| SacII | CCGCGG | 1 cut(s) | 145 |
| SalI | GTCGAC | 1 cut(s) | 4296 |
| SapI | GCTCTTC | 2 cut(s) | 3947, 5655 |
| SchI | GAGTC | 8 cut(s) | 86, 143, 1402, 1426, 1654, 1675, 5696, 6068 |
| SduI | GDGCHC | 8 cut(s) | 120, 276, 1507, 1542, 3096, 3214, 3540, 3959 |
| SfcI | CTRYAG | 6 cut(s) | 2073, 4972, 5205, 5369, 5714, 6147 |
| SfoI | GGCGCC | 2 cut(s) | 403, 3200 |
| Sfr274I | CTCGAG | 2 cut(s) | 4115, 5963 |
| Sfr303I | CCGCGG | 1 cut(s) | 145 |
| SgrBI | CCGCGG | 1 cut(s) | 145 |
| SinI | GGWCC | 9 cut(s) | 73, 1049, 2421, 3055, 3466, 3675, 3706, 4354, 5563 |
| SlaI | CTCGAG | 2 cut(s) | 4115, 5963 |
| SmaI | CCCGGG | 1 cut(s) | 329 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 832, 3582 |
| SmlI | CTYRAG | 5 cut(s) | 2110, 4115, 5188, 5382, 5963 |
| SmoI | CTYRAG | 5 cut(s) | 2110, 4115, 5188, 5382, 5963 |
| SpeI | ACTAGT | 1 cut(s) | 4198 |
| SphI | GCATGC | 1 cut(s) | 2719 |
| SspDI | GGCGCC | 2 cut(s) | 401, 3198 |
| SspI | AATATT | 2 cut(s) | 1492, 3647 |
| SstI | GAGCTC | 2 cut(s) | 3214, 3540 |
| StyI | CCWWGG | 4 cut(s) | 2173, 4098, 4357, 5275 |
| TaiI | ACGT | 6 cut(s) | 106, 117, 357, 4074, 4545, 6012 |
| TaqII | GACCGA | 1 cut(s) | 2438 |
| TatI | WGTACW | 5 cut(s) | 980, 1605, 2104, 2347, 3990 |
| TauI | GCSGC | 5 cut(s) | 126, 147, 210, 407, 3022 |
| TspGWI | ACGGA | 3 cut(s) | 299, 4195, 5861 |
| TspMI | CCCGGG | 1 cut(s) | 327 |
| Tth111I | GACNNNGTC | 2 cut(s) | 296, 4607 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 4828, 5634 |
| VpaK11BI | GGWCC | 9 cut(s) | 73, 1049, 2421, 3055, 3466, 3675, 3706, 4354, 5563 |
| VspI | ATTAAT | 2 cut(s) | 1572, 3108 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3385 |
| XapI | RAATTY | 8 cut(s) | 466, 475, 1782, 2999, 3530, 4046, 4597, 5942 |
| XbaI | TCTAGA | 2 cut(s) | 4274, 5531 |
| XceI | RCATGY | 7 cut(s) | 1871, 2348, 2707, 2719, 4494, 4514, 4562 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 67, 4235, 4853, 5762 |
| XhoI | CTCGAG | 2 cut(s) | 4115, 5963 |
| XmaI | CCCGGG | 1 cut(s) | 327 |
| XmiI | GTMKAC | 3 cut(s) | 865, 4297, 5309 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2646, 3426, 5880 |
| Zsp2I | ATGCAT | 1 cut(s) | 3825 |