Rmu_sc0015167.1_g000007

U5 small nuclear ribonucleoprotein 200 kDa

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015167.1
Physical Location & Seq
Reverse (-)
21426 .. 25030
3605 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015167.1_g000007.1.cds

Sequence Viewer

Length: 3381 bp
atgggggatattgagctttatcgattgttctcgctcagtgaagaatttaagtatgtcactgtgcggcaggatgaaaagatggaactagtaaaactactggaacgtgttcccattccggtcaaggagagcccggaagatcccggttgcaagatcaatgttttgctgcaagcatttattgcacagctgaagtttgaagggtttttgttgacacaagatatggtttacattacacagagtgctgggcgtcttgtacgagctcttttcgagatcgttttgagtcgaggatgggctcaacttgcagacaaggctttgaacttgtgtaaaatggttagcaagaggatgtggagtgtccaaatgccgcttcgccaattccatggaataacaaaagatatcttggtgaagttggagaagaataatttggcctgggaaaggtattatgacctatcttcacaggagctaggggagcttatcaagatgccaaagatgggaaaaacacttcataaggtcatccaccagttccccaaattaaaccttgcagcgcatgtgcagccaattactcgaactgtactgagggttgagcttattataacgcctgactttcaatgggaggaaaaagttcatggctatatggagccgttttgggtacttgtggaggataatgatggggaaaatattcttcatcatgaatattttttgctgaagaagcagtatattgatgaggatcatactttgaacttcactactgttttacctgtttctttcagatacctcatcttacctgaaaagtatcctccaccaacagagttattggacctgcaaccacttcctgtgacagcattaaggaatccgttatatgaagctctgtatcaagatttcaaacagtttaatcctgtccagactcaggtcttcactgttttgtataattctgatgacaatgtcttggttgctgcaccaacagggagtgggaagaccatatgcgcagagtttgctgtattgaggaatcatcaaaaggcctctgaaagtggcatgcgcgctgtttatattgcccctgttgaaggtcttgccaaggaacggcacactgattggcaaaagaagtttggaatgggaccaaacggtcttaatctttgtgttgttgaattaacaggggaaagagccacagatttaaagctactcgaaaaaggtcagattatcatcaacactccagagaaatgggatgctttatctcgcggatggaaacagagaaatcatgttcagcaagttagtctttttattagagatgaactacacttgattggtggtcagggtggttccacattggaggtaatagtctctaggatgagacgcatggcaagtgaacttgagaacaagattcgtattgtagcgctgtcaagttctcttgcaaatgccaaggatcttggaggatggataggggctacctctcacggccttttcaattttcctcctggtgtgcgcccagtgccagaaatacgcattcaggggattgatatagctaactatgaagcaaggatgcaagcgatgacaaaaccaacgtacgcggcgattgttcaacatgccaagaatggaaaaccagctcttgtgtatgttcctacgaggaaacatgtccaacaaacagctcaggatctaatggattactcaaaagcagagagttcaaatgcagagagtgctgggaacccctcatttctgttgcggtctctaaaagagatagagcctttcattaagaaaattagcaatgaacagttgcgagacgctttgcagcatggagtgggattcttgcacgagggactaaccagtgatgatcaagacattgtgtcagcactttttgaagctgagtatattcaatcgtgtgtcgtgagcagttcattgtgttggggagtgccgctgtcagcccatttggtggttgtgatgggaactcaatattatgatggccgggaaaatcttcacactgattacccagttgctgatctcttgcagatgattggtcatgcctgtcgccctaagaaagataattctgggaaatgtgtcatcctctgccatgctcctcgtaaagaatactacaagaagttcttatatgaagcattgcctgttgaaagccatttgcaccattacctacatgacaatataaatgcagaagttgtggcacaagtaattgggaaccatgaagggactctccattacctgacgtggacttttttctacaggaggcggacacaaaatcccaactattataatcttcagggagtaacgcatgcgcatatttctgagtacctttcagagcttgttgaaaacacactgagtgacctggaaacaagcaagtgtgttgctgtcgaggatggcgacgtttctgccttaaatcttggcataatagcttcatattattatatcagttattctacaattgaacgtttcagtttgtccttaacttccaaaacaaagatgaagggtcttcttgagattctagctcatgcttcagagtattcacaactttccatacgacctggagaggaagaggtgattcgaaggttgattaacaaccagagattttccttcgataatcccgactgcacagatcctcacgtcaaagcatatgctcttctccaggctcattttgcaaggcatcatgtggctgggaacctatcactggaccagcgtgaggttctcctttctgcaagtaggttgcttcacgcaatggttgatgttgcttccaccaatggatggctaaacctctctctcctagcaatggaagtcagccagatggtcacgcaggggatgtgggatcgtgactcgatgcttctacagcttcctcacttcacaagggagctggcgaagagaagccaagaatttcctggaaagaatatagagagggtatctgatttggttgacatggagtatgatgagaggcgtgaactacttcgggaactacttaagatgtcagatgtacagttggaggatattgaacaattttgcaaacgatttcccagcattgaaacgacgtttaaggtgctggagagtgagaatgtaagagctggggaggaaatcagtttgcaagttgatgcggaccgtgaacatgttggccctgttgatgcgctgagatatcccaggaccaaagaagaggggtggtggctagtagtcggggataccaagactcactcactgcttgcaatcaaaaaagttcccctactaaacaagtcgaagatccagcttagattttcggctcctgcagaagctggaaagaaggcatatacactgtatttcatgtgtgattcatatttggggtgtgatgaggaacataacttcactgtcgatgttaaagaaccagcaagccctgatgaagacggtgaagacactgaaatgagaggatga

Protein Analysis

1126

Amino Acids

128.29

Weight (kDa)

5.94

Isoelectric Point (pI)

43.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 587, 2247
AasI GACNNNNNNGTC 1 cut(s) 1113
Acc16I TGCGCA 2 cut(s) 979, 2271
Acc36I ACCTGC 1 cut(s) 822
AccB7I CCANNNNNTGG 2 cut(s) 1915, 2733
AccII CGCG 3 cut(s) 1032, 1227, 1556
AciI CCGC 8 cut(s) 64, 359, 1227, 1556, 1708, 1898, 2224, 3074
AclI AACGTT 1 cut(s) 2422
AclWI GGATC 7 cut(s) 131, 729, 1419, 1647, 2582, 2802, 3208
AcoI YGGCCR 1 cut(s) 1945
AcsI RAATTY 2 cut(s) 44, 2858
AcuI CTGAAG 4 cut(s) 206, 719, 2237, 2472
AcyI GRCGYC 1 cut(s) 244
AdeI CACNNNGTG 2 cut(s) 236, 2315
AfaI GTAC 6 cut(s) 252, 567, 645, 1553, 2285, 2958
AfeI AGCGCT 1 cut(s) 1383
AflII CTTAAG 1 cut(s) 2942
AflIII ACRYGT 3 cut(s) 103, 1618, 3085
AhdI GACNNNNNGTC 1 cut(s) 1828
AhlI ACTAGT 1 cut(s) 85
AjiI CACGTC 2 cut(s) 2202, 2596
AjnI CCWGG 7 cut(s) 422, 1462, 2319, 2515, 2616, 2863, 3116
AjuI GAANNNNNNNTTGG 4 cut(s) 345, 377, 401, 433
Alw21I GWGCWC 1 cut(s) 259
Alw26I GTCTC 4 cut(s) 1333, 1333, 1716, 1758
AlwI GGATC 7 cut(s) 131, 729, 1419, 1647, 2582, 2802, 3208
AlwNI CAGNNNCTG 2 cut(s) 1979, 3245
Aor51HI AGCGCT 1 cut(s) 1383
AoxI GGCC 5 cut(s) 420, 1011, 1444, 1945, 3091
ApeKI GCWGC 5 cut(s) 163, 536, 547, 947, 1774
ApoI RAATTY 2 cut(s) 44, 2858
Asp700I GAANNNNTTC 5 cut(s) 105, 615, 672, 1956, 2928
AspLEI GCGC 8 cut(s) 541, 980, 1032, 1034, 1384, 1473, 2272, 3106
AspS9I GGNCC 6 cut(s) 811, 1106, 2662, 3076, 3092, 3120
AsuC2I CCSGG 3 cut(s) 131, 141, 1949
AsuHPI GGTGA 3 cut(s) 409, 2542, 3368
AsuII TTCGAA 1 cut(s) 2536
AvaII GGWCC 5 cut(s) 811, 1106, 2662, 3076, 3120
BanII GRGCYC 3 cut(s) 131, 259, 292
BauI CACGAG 1 cut(s) 1796
BbsI GAAGAC 5 cut(s) 898, 974, 2456, 3357, 3366
Bbv12I GWGCWC 1 cut(s) 259
BbvI GCAGC 5 cut(s) 150, 548, 559, 934, 1786
BceAI ACGGC 3 cut(s) 619, 1088, 1459
BcgI CGANNNNNNTGC 2 cut(s) 2345, 2379
BciT130I CCWGG 7 cut(s) 424, 1464, 2321, 2517, 2618, 2865, 3118
BciVI GTATCC 2 cut(s) 798, 3148
BclI TGATCA 1 cut(s) 1816
BcnI CCSGG 3 cut(s) 131, 141, 1949
BcoDI GTCTC 4 cut(s) 1333, 1333, 1716, 1758
BcuI ACTAGT 1 cut(s) 85
BfaI CTAG 6 cut(s) 86, 458, 1332, 2477, 2753, 3143
BfmI CTRYAG 3 cut(s) 2215, 2813, 3237
BfoI RGCGCY 1 cut(s) 1385
BfrI CTTAAG 1 cut(s) 2942
BfuAI ACCTGC 1 cut(s) 822
BfuI GTATCC 2 cut(s) 798, 3148
BisI GCNGC 9 cut(s) 65, 164, 359, 537, 548, 948, 1557, 1775, 1898
BlsI GCNGC 9 cut(s) 66, 165, 360, 538, 549, 949, 1558, 1776, 1899
Bme18I GGWCC 5 cut(s) 811, 1106, 2662, 3076, 3120
BmeRI GACNNNNNGTC 1 cut(s) 1828
BmgBI CACGTC 2 cut(s) 2202, 2596
BmgT120I GGNCC 6 cut(s) 811, 1106, 2662, 3076, 3092, 3120
BmiI GGNNCC 7 cut(s) 633, 1107, 1309, 1691, 2174, 2651, 3234
BmrI ACTGGG 2 cut(s) 1469, 1967
BmsI GCATC 7 cut(s) 465, 1204, 1518, 2644, 2796, 3061, 3091
BmuI ACTGGG 2 cut(s) 1469, 1967
BoxI GACNNNNGTC 1 cut(s) 902
BpiI GAAGAC 5 cut(s) 898, 974, 2456, 3357, 3366
BpmI CTGGAG 4 cut(s) 1185, 2538, 2600, 3044
Bpu10I CCTNAGC 1 cut(s) 1635
Bpu14I TTCGAA 1 cut(s) 2536
BpuEI CTTGAG 2 cut(s) 1379, 2489
BpuMI CCSGG 3 cut(s) 131, 141, 1949
Bsa29I ATCGAT 1 cut(s) 22
BsaBI GATNNNNATC 2 cut(s) 720, 1190
BsaHI GRCGYC 1 cut(s) 244
BsaI GGTCTC 1 cut(s) 1716
BsaJI CCNNGG 5 cut(s) 373, 423, 1065, 1407, 3116
BsaWI WCCGGW 1 cut(s) 115
Bse1I ACTGG 6 cut(s) 102, 514, 1475, 1809, 1973, 2664
Bse3DI GCAATG 4 cut(s) 1756, 2096, 2712, 2763
Bse8I GATNNNNATC 2 cut(s) 720, 1190
BseBI CCWGG 7 cut(s) 424, 1464, 2321, 2517, 2618, 2865, 3118
BseCI ATCGAT 1 cut(s) 22
BseDI CCNNGG 5 cut(s) 373, 423, 1065, 1407, 3116
BseJI GATNNNNATC 2 cut(s) 720, 1190
BseMI GCAATG 4 cut(s) 1756, 2096, 2712, 2763
BseMII CTCAG 8 cut(s) 49, 560, 914, 1649, 1839, 2271, 2303, 3098
BseNI ACTGG 6 cut(s) 102, 514, 1475, 1809, 1973, 2664
BsePI GCGCGC 1 cut(s) 1030
BseRI GAGGAG 1 cut(s) 2049
BseXI GCAGC 5 cut(s) 150, 548, 559, 934, 1786
BseYI CCCAGC 5 cut(s) 239, 1685, 2645, 2996, 3044
BsgI GTGCAG 3 cut(s) 566, 933, 2566
Bsh1236I CGCG 3 cut(s) 1032, 1227, 1556
BshFI GGCC 5 cut(s) 422, 1013, 1446, 1947, 3093
BshVI ATCGAT 1 cut(s) 22
BsiHKAI GWGCWC 1 cut(s) 259
BsiSI CCGG 4 cut(s) 116, 131, 141, 1948
BsiWI CGTACG 1 cut(s) 1551
BslFI GGGAC 3 cut(s) 1119, 1815, 2197
BsmAI GTCTC 4 cut(s) 1333, 1333, 1716, 1758
BsmBI CGTCTC 2 cut(s) 1333, 1758
BsmFI GGGAC 3 cut(s) 1119, 1815, 2197
BsmI GAATGC 1 cut(s) 1491
BsnI GGCC 5 cut(s) 422, 1013, 1446, 1947, 3093
Bso31I GGTCTC 1 cut(s) 1716
Bsp119I TTCGAA 1 cut(s) 2536
Bsp1286I GDGCHC 3 cut(s) 131, 259, 292
Bsp1407I TGTACA 1 cut(s) 2956
Bsp19I CCATGG 1 cut(s) 373
BspACI CCGC 8 cut(s) 64, 359, 1227, 1556, 1708, 1898, 2224, 3074
BspANI GGCC 5 cut(s) 422, 1013, 1446, 1947, 3093
BspCNI CTCAG 8 cut(s) 48, 561, 913, 1648, 1840, 2272, 2304, 3099
BspDI ATCGAT 1 cut(s) 22
BspFNI CGCG 3 cut(s) 1032, 1227, 1556
BspHI TCATGA 1 cut(s) 682
BspLI GGNNCC 7 cut(s) 633, 1107, 1309, 1691, 2174, 2651, 3234
BspMAI CTGCAG 1 cut(s) 3241
BspMI ACCTGC 1 cut(s) 822
BspPI GGATC 7 cut(s) 131, 729, 1419, 1647, 2582, 2802, 3208
BspQI GCTCTTC 1 cut(s) 2616
BspT104I TTCGAA 1 cut(s) 2536
BspTI CTTAAG 1 cut(s) 2942
BspTNI GGTCTC 1 cut(s) 1716
BsrDI GCAATG 4 cut(s) 1756, 2096, 2712, 2763
BsrGI TGTACA 1 cut(s) 2956
BsrI ACTGG 6 cut(s) 102, 514, 1475, 1809, 1973, 2664
BssECI CCNNGG 5 cut(s) 373, 423, 1065, 1407, 3116
BssHII GCGCGC 1 cut(s) 1030
BssNI GRCGYC 1 cut(s) 244
BssSI CACGAG 1 cut(s) 1796
BssT1I CCWWGG 3 cut(s) 373, 1065, 1407
Bst2BI CACGAG 1 cut(s) 1796
Bst2UI CCWGG 7 cut(s) 424, 1464, 2321, 2517, 2618, 2865, 3118
Bst6I CTCTTC 4 cut(s) 2520, 2616, 2840, 3123
BstACI GRCGYC 1 cut(s) 244
BstAFI CTTAAG 1 cut(s) 2942
BstAPI GCANNNNNTGC 3 cut(s) 176, 986, 1682
BstAUI TGTACA 1 cut(s) 2956
BstBI TTCGAA 1 cut(s) 2536
BstC8I GCNNGC 8 cut(s) 168, 1028, 1032, 1533, 2268, 2841, 3177, 3340
BstDSI CCRYGG 1 cut(s) 373
BstENI CCTNNNNNAGG 2 cut(s) 427, 1053
BstFNI CGCG 3 cut(s) 1032, 1227, 1556
BstH2I RGCGCY 1 cut(s) 1385
BstHHI GCGC 8 cut(s) 541, 980, 1032, 1034, 1384, 1473, 2272, 3106
BstMAI GTCTC 4 cut(s) 1333, 1333, 1716, 1758
BstNI CCWGG 7 cut(s) 424, 1464, 2321, 2517, 2618, 2865, 3118
BstNSI RCATGY 6 cut(s) 545, 1030, 1574, 1622, 2270, 3089
BstPAI GACNNNNGTC 1 cut(s) 902
BstSFI CTRYAG 3 cut(s) 2215, 2813, 3237
BstUI CGCG 3 cut(s) 1032, 1227, 1556
BstV1I GCAGC 5 cut(s) 150, 548, 559, 934, 1786
BstV2I GAAGAC 5 cut(s) 898, 974, 2456, 3357, 3366
BstX2I RGATCY 5 cut(s) 136, 1411, 1639, 2587, 3213
BstXI CCANNNNNNTGG 2 cut(s) 374, 1209
BstYI RGATCY 5 cut(s) 136, 1411, 1639, 2587, 3213
Bsu15I ATCGAT 1 cut(s) 22
BsuI GTATCC 2 cut(s) 798, 3148
BsuRI GGCC 5 cut(s) 422, 1013, 1446, 1947, 3093
BsuTUI ATCGAT 1 cut(s) 22
BtgI CCRYGG 1 cut(s) 373
BtgZI GCGATG 1 cut(s) 1550
BtrI CACGTC 2 cut(s) 2202, 2596
BtsI GCAGTG 1 cut(s) 3170
BveI ACCTGC 1 cut(s) 822
Cac8I GCNNGC 8 cut(s) 168, 1028, 1032, 1533, 2268, 2841, 3177, 3340
CaiI CAGNNNCTG 2 cut(s) 1979, 3245
CciI TCATGA 1 cut(s) 682
CfoI GCGC 8 cut(s) 541, 980, 1032, 1034, 1384, 1473, 2272, 3106
Cfr13I GGNCC 6 cut(s) 811, 1106, 2662, 3076, 3092, 3120
ClaI ATCGAT 1 cut(s) 22
CpoI CGGWCCG 1 cut(s) 3076
CseI GACGC 3 cut(s) 233, 1350, 1775
Csp6I GTAC 6 cut(s) 251, 566, 644, 1552, 2284, 2957
CspI CGGWCCG 1 cut(s) 3076
CviQI GTAC 6 cut(s) 251, 566, 644, 1552, 2284, 2957
DraI TTTAAA 1 cut(s) 1164
DraIII CACNNNGTG 2 cut(s) 236, 2315
DrdI GACNNNNNNGTC 1 cut(s) 1113
DriI GACNNNNNGTC 1 cut(s) 1828
DseDI GACNNNNNNGTC 1 cut(s) 1113
EaeI YGGCCR 1 cut(s) 1945
Eam1104I CTCTTC 4 cut(s) 2520, 2616, 2840, 3123
Eam1105I GACNNNNNGTC 1 cut(s) 1828
EarI CTCTTC 4 cut(s) 2520, 2616, 2840, 3123
EciI GGCGGA 1 cut(s) 2239
Ecl136II GAGCTC 1 cut(s) 257
Eco130I CCWWGG 3 cut(s) 373, 1065, 1407
Eco147I AGGCCT 1 cut(s) 1013
Eco24I GRGCYC 3 cut(s) 131, 259, 292
Eco31I GGTCTC 1 cut(s) 1716
Eco32I GATATC 2 cut(s) 391, 3113
Eco47I GGWCC 5 cut(s) 811, 1106, 2662, 3076, 3120
Eco47III AGCGCT 1 cut(s) 1383
Eco53kI GAGCTC 1 cut(s) 257
Eco57I CTGAAG 4 cut(s) 206, 719, 2237, 2472
EcoICRI GAGCTC 1 cut(s) 257
EcoNI CCTNNNNNAGG 2 cut(s) 427, 1053
EcoRII CCWGG 7 cut(s) 422, 1462, 2319, 2515, 2616, 2863, 3116
EcoRV GATATC 2 cut(s) 391, 3113
EcoT14I CCWWGG 3 cut(s) 373, 1065, 1407
EcoT38I GRGCYC 3 cut(s) 131, 259, 292
ErhI CCWWGG 3 cut(s) 373, 1065, 1407
Esp3I CGTCTC 2 cut(s) 1333, 1758
FalI AAGNNNNNCTT 4 cut(s) 1248, 1280, 2069, 2101
FaqI GGGAC 3 cut(s) 1119, 1815, 2197
FauNDI CATATG 2 cut(s) 974, 2605
FbaI TGATCA 1 cut(s) 1816
Fnu4HI GCNGC 9 cut(s) 65, 164, 359, 537, 548, 948, 1557, 1775, 1898
FriOI GRGCYC 3 cut(s) 131, 259, 292
Fsp4HI GCNGC 9 cut(s) 65, 164, 359, 537, 548, 948, 1557, 1775, 1898
FspAI RTGCGCAY 1 cut(s) 2271
FspBI CTAG 6 cut(s) 86, 458, 1332, 2477, 2753, 3143
FspI TGCGCA 2 cut(s) 979, 2271
GlaI GCGC 8 cut(s) 540, 979, 1031, 1033, 1383, 1472, 2271, 3105
GluI GCNGC 9 cut(s) 65, 164, 359, 537, 548, 948, 1557, 1775, 1898
GsaI CCCAGC 5 cut(s) 243, 1689, 2649, 3000, 3048
GsuI CTGGAG 4 cut(s) 1185, 2538, 2600, 3044
HaeII RGCGCY 1 cut(s) 1385
HaeIII GGCC 5 cut(s) 422, 1013, 1446, 1947, 3093
HapII CCGG 4 cut(s) 116, 131, 141, 1948
HgaI GACGC 3 cut(s) 233, 1350, 1775
HhaI GCGC 8 cut(s) 541, 980, 1032, 1034, 1384, 1473, 2272, 3106
Hin1I GRCGYC 1 cut(s) 244
Hin6I GCGC 8 cut(s) 539, 978, 1030, 1032, 1382, 1471, 2270, 3104
HinP1I GCGC 8 cut(s) 539, 978, 1030, 1032, 1382, 1471, 2270, 3104
HincII GTYRAC 2 cut(s) 207, 2899
HindII GTYRAC 2 cut(s) 207, 2899
HpaII CCGG 4 cut(s) 116, 131, 141, 1948
HphI GGTGA 3 cut(s) 409, 2542, 3368
Hpy166II GTNNAC 7 cut(s) 207, 223, 1355, 2205, 2899, 2924, 3083
Hpy188I TCNGA 9 cut(s) 764, 928, 1018, 1185, 2281, 2293, 2491, 2890, 2953
Hpy8I GTNNAC 7 cut(s) 207, 223, 1355, 2205, 2899, 2924, 3083
Hpy99I CGWCG 2 cut(s) 2360, 3013
HpyAV CCTTC 7 cut(s) 188, 1049, 2174, 2452, 2532, 2575, 3247
HpyCH4IV ACGT 7 cut(s) 103, 1550, 2201, 2358, 2422, 2595, 3011
HpySE526I ACGT 7 cut(s) 103, 1550, 2201, 2358, 2422, 2595, 3011
Hsp92I GRCGYC 1 cut(s) 244
HspAI GCGC 8 cut(s) 539, 978, 1030, 1032, 1382, 1471, 2270, 3104
Ksp22I TGATCA 1 cut(s) 1816
LguI GCTCTTC 1 cut(s) 2616
LmnI GCTCC 6 cut(s) 454, 463, 631, 2062, 2836, 3238
Lsp1109I GCAGC 5 cut(s) 150, 548, 559, 934, 1786
LweI GCATC 7 cut(s) 465, 1204, 1518, 2644, 2796, 3061, 3091
MaeI CTAG 6 cut(s) 86, 458, 1332, 2477, 2753, 3143
MaeII ACGT 7 cut(s) 103, 1550, 2201, 2358, 2422, 2595, 3011
MaeIII GTNAC 6 cut(s) 55, 829, 2260, 2315, 2776, 2798
MfeI CAATTG 1 cut(s) 2415
MflI RGATCY 5 cut(s) 136, 1411, 1639, 2587, 3213
MhlI GDGCHC 3 cut(s) 131, 259, 292
MlyI GAGTC 5 cut(s) 286, 892, 2179, 2795, 3157
MmeI TCCRAC 3 cut(s) 384, 1648, 2943
MroXI GAANNNNTTC 5 cut(s) 105, 615, 672, 1956, 2928
MslI CAYNNNNRTG 1 cut(s) 3368
MspA1I CMGCKG 2 cut(s) 184, 1900
MspCI CTTAAG 1 cut(s) 2942
MspI CCGG 4 cut(s) 116, 131, 141, 1948
MunI CAATTG 1 cut(s) 2415
Mva1269I GAATGC 1 cut(s) 1491
MvaI CCWGG 7 cut(s) 424, 1464, 2321, 2517, 2618, 2865, 3118
MvnI CGCG 3 cut(s) 1032, 1227, 1556
NciI CCSGG 3 cut(s) 131, 141, 1949
NcoI CCATGG 1 cut(s) 373
NdeI CATATG 2 cut(s) 974, 2605
NlaIV GGNNCC 7 cut(s) 633, 1107, 1309, 1691, 2174, 2651, 3234
NmuCI GTSAC 5 cut(s) 55, 829, 2315, 2776, 2798
NsbI TGCGCA 2 cut(s) 979, 2271
NspI RCATGY 6 cut(s) 545, 1030, 1574, 1622, 2270, 3089
NspV TTCGAA 1 cut(s) 2536
PaeI GCATGC 2 cut(s) 1030, 2270
PagI TCATGA 1 cut(s) 682
PauI GCGCGC 1 cut(s) 1030
PceI AGGCCT 1 cut(s) 1013
PciI ACATGT 2 cut(s) 1618, 3085
PciSI GCTCTTC 1 cut(s) 2616
PcsI WCGNNNNNNNCGW 3 cut(s) 1556, 2352, 2574
PctI GAATGC 1 cut(s) 1491
PdmI GAANNNNTTC 5 cut(s) 105, 615, 672, 1956, 2928
PfeI GAWTC 7 cut(s) 844, 1000, 1369, 1788, 2473, 2533, 3281
Pfl23II CGTACG 1 cut(s) 1551
PflFI GACNNNGTC 1 cut(s) 935
PflMI CCANNNNNTGG 2 cut(s) 1915, 2733
PfoI TCCNGGA 1 cut(s) 2863
PkrI GCNGC 9 cut(s) 66, 165, 360, 538, 549, 949, 1558, 1776, 1899
PleI GAGTC 5 cut(s) 285, 892, 2179, 2795, 3157
PpsI GAGTC 5 cut(s) 285, 892, 2179, 2795, 3157
PscI ACATGT 2 cut(s) 1618, 3085
PshAI GACNNNNGTC 1 cut(s) 902
PsiI TTATAA 2 cut(s) 587, 2247
Psp124BI GAGCTC 1 cut(s) 259
Psp1406I AACGTT 1 cut(s) 2422
Psp6I CCWGG 7 cut(s) 422, 1462, 2319, 2515, 2616, 2863, 3116
PspFI CCCAGC 5 cut(s) 239, 1685, 2645, 2996, 3044
PspGI CCWGG 7 cut(s) 422, 1462, 2319, 2515, 2616, 2863, 3116
PspLI CGTACG 1 cut(s) 1551
PspN4I GGNNCC 7 cut(s) 633, 1107, 1309, 1691, 2174, 2651, 3234
PspPI GGNCC 6 cut(s) 811, 1106, 2662, 3076, 3092, 3120
PstI CTGCAG 1 cut(s) 3241
PstNI CAGNNNCTG 2 cut(s) 1979, 3245
PsuI RGATCY 5 cut(s) 136, 1411, 1639, 2587, 3213
PsyI GACNNNGTC 1 cut(s) 935
PteI GCGCGC 1 cut(s) 1030
PvuII CAGCTG 1 cut(s) 184
RsaI GTAC 6 cut(s) 252, 567, 645, 1553, 2285, 2958
RsaNI GTAC 6 cut(s) 251, 566, 644, 1552, 2284, 2957
RseI CAYNNNNRTG 1 cut(s) 3368
Rsr2I CGGWCCG 1 cut(s) 3076
RsrII CGGWCCG 1 cut(s) 3076
SacI GAGCTC 1 cut(s) 259
SapI GCTCTTC 1 cut(s) 2616
SatI GCNGC 9 cut(s) 65, 164, 359, 537, 548, 948, 1557, 1775, 1898
Sau96I GGNCC 6 cut(s) 811, 1106, 2662, 3076, 3092, 3120
SchI GAGTC 5 cut(s) 286, 892, 2179, 2795, 3157
SduI GDGCHC 3 cut(s) 131, 259, 292
SfaNI GCATC 7 cut(s) 465, 1204, 1518, 2644, 2796, 3061, 3091
SfcI CTRYAG 3 cut(s) 2215, 2813, 3237
SfuI TTCGAA 1 cut(s) 2536
SinI GGWCC 5 cut(s) 811, 1106, 2662, 3076, 3120
SmiMI CAYNNNNRTG 1 cut(s) 3368
SmlI CTYRAG 3 cut(s) 1358, 2468, 2942
SmoI CTYRAG 3 cut(s) 1358, 2468, 2942
SpeI ACTAGT 1 cut(s) 85
SphI GCATGC 2 cut(s) 1030, 2270
SseBI AGGCCT 1 cut(s) 1013
SsiI CCGC 8 cut(s) 64, 359, 1227, 1556, 1708, 1898, 2224, 3074
SspI AATATT 3 cut(s) 673, 689, 1937
SspMI CTAG 6 cut(s) 86, 458, 1332, 2477, 2753, 3143
SstI GAGCTC 1 cut(s) 259
StuI AGGCCT 1 cut(s) 1013
StyI CCWWGG 3 cut(s) 373, 1065, 1407
TaiI ACGT 7 cut(s) 106, 1553, 2204, 2361, 2425, 2598, 3014
TatI WGTACW 2 cut(s) 565, 2956
TauI GCSGC 4 cut(s) 67, 361, 1559, 1900
TfiI GAWTC 7 cut(s) 844, 1000, 1369, 1788, 2473, 2533, 3281
TseFI GTSAC 5 cut(s) 55, 829, 2315, 2776, 2798
TseI GCWGC 5 cut(s) 163, 536, 547, 947, 1774
Tsp45I GTSAC 5 cut(s) 55, 829, 2315, 2776, 2798
TspGWI ACGGA 1 cut(s) 837
Tth111I GACNNNGTC 1 cut(s) 935
Van91I CCANNNNNTGG 2 cut(s) 1915, 2733
Vha464I CTTAAG 1 cut(s) 2942
VpaK11BI GGWCC 5 cut(s) 811, 1106, 2662, 3076, 3120
XagI CCTNNNNNAGG 2 cut(s) 427, 1053
XapI RAATTY 2 cut(s) 44, 2858
XceI RCATGY 6 cut(s) 545, 1030, 1574, 1622, 2270, 3089
XcmI CCANNNNNNNNNTGG 1 cut(s) 2861
XmnI GAANNNNTTC 5 cut(s) 105, 615, 672, 1956, 2928
XspI CTAG 6 cut(s) 86, 458, 1332, 2477, 2753, 3143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.