Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ribosomal_L30 | PF00327 | 20 - 69 | 1e-17 | Ribosomal protein L30p/L7e |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 287 |
| Acc36I | ACCTGC | 1 cut(s) | 181 |
| AciI | CCGC | 1 cut(s) | 238 |
| AclWI | GGATC | 1 cut(s) | 178 |
| AfaI | GTAC | 1 cut(s) | 109 |
| AgsI | TTSAA | 1 cut(s) | 13 |
| AjnI | CCWGG | 2 cut(s) | 82, 89 |
| AluBI | AGCT | 1 cut(s) | 266 |
| AluI | AGCT | 1 cut(s) | 266 |
| Alw21I | GWGCWC | 1 cut(s) | 268 |
| Alw26I | GTCTC | 1 cut(s) | 209 |
| AlwI | GGATC | 1 cut(s) | 178 |
| AoxI | GGCC | 1 cut(s) | 234 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 8 |
| AspS9I | GGNCC | 1 cut(s) | 235 |
| AsuHPI | GGTGA | 2 cut(s) | 82, 284 |
| BanII | GRGCYC | 2 cut(s) | 50, 268 |
| BbsI | GAAGAC | 1 cut(s) | 119 |
| Bbv12I | GWGCWC | 1 cut(s) | 268 |
| BccI | CCATC | 1 cut(s) | 150 |
| BciT130I | CCWGG | 2 cut(s) | 84, 91 |
| BcoDI | GTCTC | 1 cut(s) | 209 |
| BfuAI | ACCTGC | 1 cut(s) | 181 |
| Bme1390I | CCNGG | 2 cut(s) | 84, 91 |
| BmgT120I | GGNCC | 1 cut(s) | 235 |
| BmiI | GGNNCC | 2 cut(s) | 47, 88 |
| BmrFI | CCNGG | 2 cut(s) | 84, 91 |
| BpiI | GAAGAC | 1 cut(s) | 119 |
| BsaJI | CCNNGG | 1 cut(s) | 82 |
| BseBI | CCWGG | 2 cut(s) | 84, 91 |
| BseDI | CCNNGG | 1 cut(s) | 82 |
| BseGI | GGATG | 1 cut(s) | 256 |
| BseRI | GAGGAG | 1 cut(s) | 258 |
| BshFI | GGCC | 1 cut(s) | 236 |
| BsiHKAI | GWGCWC | 1 cut(s) | 268 |
| BslFI | GGGAC | 1 cut(s) | 258 |
| BsmAI | GTCTC | 1 cut(s) | 209 |
| BsmFI | GGGAC | 1 cut(s) | 258 |
| BsmI | GAATGC | 1 cut(s) | 10 |
| BsnI | GGCC | 1 cut(s) | 236 |
| Bsp1286I | GDGCHC | 2 cut(s) | 50, 268 |
| Bsp143I | GATC | 1 cut(s) | 183 |
| BspACI | CCGC | 1 cut(s) | 238 |
| BspANI | GGCC | 1 cut(s) | 236 |
| BspLI | GGNNCC | 2 cut(s) | 47, 88 |
| BspMI | ACCTGC | 1 cut(s) | 181 |
| BspPI | GGATC | 1 cut(s) | 178 |
| BssECI | CCNNGG | 1 cut(s) | 82 |
| BssMI | GATC | 1 cut(s) | 183 |
| Bst2UI | CCWGG | 2 cut(s) | 84, 91 |
| Bst4CI | ACNGT | 2 cut(s) | 148, 172 |
| Bst6I | CTCTTC | 1 cut(s) | 216 |
| BstC8I | GCNNGC | 1 cut(s) | 238 |
| BstF5I | GGATG | 1 cut(s) | 256 |
| BstKTI | GATC | 1 cut(s) | 186 |
| BstMAI | GTCTC | 1 cut(s) | 209 |
| BstMBI | GATC | 1 cut(s) | 183 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 14, 103 |
| BstNI | CCWGG | 2 cut(s) | 84, 91 |
| BstSCI | CCNGG | 2 cut(s) | 82, 89 |
| BstV2I | GAAGAC | 1 cut(s) | 119 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 42 |
| BsuRI | GGCC | 1 cut(s) | 236 |
| BtgZI | GCGATG | 1 cut(s) | 169 |
| BtsCI | GGATG | 1 cut(s) | 256 |
| BveI | ACCTGC | 1 cut(s) | 181 |
| Cac8I | GCNNGC | 1 cut(s) | 238 |
| Cfr13I | GGNCC | 1 cut(s) | 235 |
| Csp6I | GTAC | 1 cut(s) | 108 |
| CviAII | CATG | 2 cut(s) | 42, 151 |
| CviJI | RGCY | 5 cut(s) | 17, 48, 97, 236, 266 |
| CviKI_1 | RGCY | 5 cut(s) | 17, 48, 97, 236, 266 |
| CviQI | GTAC | 1 cut(s) | 108 |
| DpnI | GATC | 1 cut(s) | 185 |
| DpnII | GATC | 1 cut(s) | 183 |
| DraI | TTTAAA | 1 cut(s) | 22 |
| Eam1104I | CTCTTC | 1 cut(s) | 216 |
| EarI | CTCTTC | 1 cut(s) | 216 |
| Ecl136II | GAGCTC | 1 cut(s) | 266 |
| Eco24I | GRGCYC | 2 cut(s) | 50, 268 |
| Eco53kI | GAGCTC | 1 cut(s) | 266 |
| EcoICRI | GAGCTC | 1 cut(s) | 266 |
| EcoRII | CCWGG | 2 cut(s) | 82, 89 |
| EcoT38I | GRGCYC | 2 cut(s) | 50, 268 |
| FaeI | CATG | 2 cut(s) | 45, 154 |
| FaiI | YATR | 7 cut(s) | 43, 60, 62, 152, 231, 287, 325 |
| FaqI | GGGAC | 1 cut(s) | 258 |
| FatI | CATG | 2 cut(s) | 41, 150 |
| FauI | CCCGC | 1 cut(s) | 245 |
| FokI | GGATG | 1 cut(s) | 263 |
| FriOI | GRGCYC | 2 cut(s) | 50, 268 |
| HaeIII | GGCC | 1 cut(s) | 236 |
| Hin1II | CATG | 2 cut(s) | 45, 154 |
| HincII | GTYRAC | 1 cut(s) | 256 |
| HindII | GTYRAC | 1 cut(s) | 256 |
| HinfI | GANTC | 1 cut(s) | 78 |
| HphI | GGTGA | 2 cut(s) | 82, 284 |
| Hpy166II | GTNNAC | 1 cut(s) | 256 |
| Hpy188III | TCNNGA | 1 cut(s) | 196 |
| Hpy8I | GTNNAC | 1 cut(s) | 256 |
| HpyCH4III | ACNGT | 2 cut(s) | 148, 172 |
| HpyCH4IV | ACGT | 1 cut(s) | 124 |
| HpyCH4V | TGCA | 3 cut(s) | 41, 138, 308 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 14, 103 |
| HpySE526I | ACGT | 1 cut(s) | 124 |
| Hsp92II | CATG | 2 cut(s) | 45, 154 |
| Kzo9I | GATC | 1 cut(s) | 183 |
| LmnI | GCTCC | 2 cut(s) | 45, 271 |
| LpnPI | CCDG | 9 cut(s) | 53, 69, 76, 88, 96, 103, 176, 200, 312 |
| MaeII | ACGT | 1 cut(s) | 124 |
| MalI | GATC | 1 cut(s) | 185 |
| MboI | GATC | 1 cut(s) | 183 |
| MboII | GAAGA | 4 cut(s) | 119, 233, 309, 312 |
| MfeI | CAATTG | 1 cut(s) | 36 |
| MhlI | GDGCHC | 2 cut(s) | 50, 268 |
| MluCI | AATT | 1 cut(s) | 36 |
| MnlI | CCTC | 5 cut(s) | 66, 87, 109, 279, 305 |
| MroXI | GAANNNNTTC | 1 cut(s) | 8 |
| MseI | TTAA | 1 cut(s) | 21 |
| MspR9I | CCNGG | 2 cut(s) | 84, 91 |
| MunI | CAATTG | 1 cut(s) | 36 |
| Mva1269I | GAATGC | 1 cut(s) | 10 |
| MvaI | CCWGG | 2 cut(s) | 84, 91 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 14, 103 |
| NdeII | GATC | 1 cut(s) | 183 |
| NlaIII | CATG | 2 cut(s) | 45, 154 |
| NlaIV | GGNNCC | 2 cut(s) | 47, 88 |
| PctI | GAATGC | 1 cut(s) | 10 |
| PdmI | GAANNNNTTC | 1 cut(s) | 8 |
| PfeI | GAWTC | 1 cut(s) | 78 |
| PsiI | TTATAA | 1 cut(s) | 287 |
| Psp124BI | GAGCTC | 1 cut(s) | 268 |
| Psp6I | CCWGG | 2 cut(s) | 82, 89 |
| PspGI | CCWGG | 2 cut(s) | 82, 89 |
| PspN4I | GGNNCC | 2 cut(s) | 47, 88 |
| PspPI | GGNCC | 1 cut(s) | 235 |
| RsaI | GTAC | 1 cut(s) | 109 |
| RsaNI | GTAC | 1 cut(s) | 108 |
| SacI | GAGCTC | 1 cut(s) | 268 |
| SaqAI | TTAA | 1 cut(s) | 21 |
| Sau3AI | GATC | 1 cut(s) | 183 |
| Sau96I | GGNCC | 1 cut(s) | 235 |
| ScrFI | CCNGG | 2 cut(s) | 84, 91 |
| SduI | GDGCHC | 2 cut(s) | 50, 268 |
| SetI | ASST | 4 cut(s) | 127, 195, 268, 297 |
| Sse9I | AATT | 1 cut(s) | 36 |
| SsiI | CCGC | 1 cut(s) | 238 |
| SstI | GAGCTC | 1 cut(s) | 268 |
| StyD4I | CCNGG | 2 cut(s) | 82, 89 |
| TaaI | ACNGT | 2 cut(s) | 148, 172 |
| TaiI | ACGT | 1 cut(s) | 127 |
| TasI | AATT | 1 cut(s) | 36 |
| TfiI | GAWTC | 1 cut(s) | 78 |
| Tru1I | TTAA | 1 cut(s) | 21 |
| Tru9I | TTAA | 1 cut(s) | 21 |
| TspDTI | ATGAA | 2 cut(s) | 17, 312 |
| XmnI | GAANNNNTTC | 1 cut(s) | 8 |