Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000142

Physical Location & Seq

Genomic Coordinates Reverse (-)

53282602 .. 53358619

Gene Structure 76018 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0416100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1008 bp

ATGTTGCCGACATTCAATCAGTTCATCTTTTCACTACTACTTCTTTGGTTTGCTCTTAATCTTCTGCTCCTTGTTCATGCACAGGATGATCAGTCAGGCTTCATTAGCATAGATTGTGGCAAATCGGGTTCTAGCTATACTGAAAAAGTTACCGGAATTACTTACATTTCGGACTCAAACTTCGTCGACACCGGTGAAAGTAACTTCATATTGGATAAATATTTCGATGCCCATCCTCAACCCTACCAATCTCTCAGGAGCTTCCCTCAAGGCATCAGGAACTGCTACAAAATAAACATTACAAGTGGAACCAAATATTTGATTCGAGCAATTTTTGTGCATGGGAATTATGATGGGCAGGACAAGTTACCAAAATTTGATCTCTATCTTGGACCAAATTTGTGGGATTCAGTGAAGCTTATGAATGCATCCATTGGCGTAACCAAGGAGCTCATACATTATGTCCCAAGACCCAGAAACTATATACAACTTTGTCTGGTGAACAAGCTCTCTGGAATTCCATTTATATCAGCAATCGAGTTAAGGCCTCTACCCAACTCAACTTATCCACCAAATATGGGGCCCATGGCACTTGTCTGGCGGTTCGACACTGGTCAATTAGCACCTAATTTTGCAAAATACCGGTATCCATTCGATGTTCTCGATCGCTTCTGGAATGTCTTTAATGACTTCGACTATTGGAAACAACTAAATAGCTCAACTGACAGCGACGTCTCTACTACCATGCCATCTGAAAGGTCAAGCAACGGCAAAAATACTTCGGTTAACACTATAACCGTCGCGCTTTGGACATCCCCGTCCTCAGCACCATATACTTCGGTTAATAATAAACCGTCGCGCTTTGGACATCCCCGTCCTCAGCGCACAACTTCGGTTAATAATAAACCGTCGCACCTTGGACATCCCCGTCCTCAGCACACAAACACTCCGGTTATCCTTAACCGTCGAACTTCGGACACCTCATCCTCAGAACCTTACATTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030684 GO:0030686 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904 GO:2000232

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT_2 Pescadillo_N

Protein Analysis

335

Amino Acids

38.0

Weight (kDa)

9.08

Isoelectric Point (pI)

45.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	37 - 248	2.2e-68	Malectin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000142)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica	MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica	Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis	pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis	RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata	RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora	Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa	Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha	Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana	Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	4 cut(s)	731, 817, 873, 927
AatII	GACGTC	1 cut(s)	735
AccI	GTMKAC	1 cut(s)	186
AccII	CGCG	2 cut(s)	803, 859
AciI	CCGC	1 cut(s)	601
AcsI	RAATTY	3 cut(s)	374, 397, 516
AcyI	GRCGYC	1 cut(s)	732
AfiI	CCNNNNNNNGG	1 cut(s)	578
AgeI	ACCGGT	2 cut(s)	191, 642
AgsI	TTSAA	1 cut(s)	16
AluBI	AGCT	6 cut(s)	135, 261, 418, 451, 508, 717
AluI	AGCT	6 cut(s)	135, 261, 418, 451, 508, 717
Alw21I	GWGCWC	1 cut(s)	453
Alw26I	GTCTC	1 cut(s)	739
AlwNI	CAGNNNCTG	1 cut(s)	282
AoxI	GGCC	2 cut(s)	545, 581
ApaI	GGGCCC	1 cut(s)	585
ApoI	RAATTY	3 cut(s)	374, 397, 516
ArsI	GACNNNNNNTTYG	2 cut(s)	164, 196
AsiGI	ACCGGT	2 cut(s)	191, 642
AspLEI	GCGC	3 cut(s)	805, 861, 885
AspS9I	GGNCC	3 cut(s)	392, 581, 582
AsuHPI	GGTGA	2 cut(s)	206, 511
AvaII	GGWCC	1 cut(s)	392
BaeGI	GKGCMC	1 cut(s)	585
BanII	GRGCYC	2 cut(s)	453, 585
Bbv12I	GWGCWC	1 cut(s)	453
BbvCI	CCTCAGC	3 cut(s)	823, 879, 933
BccI	CCATC	3 cut(s)	240, 347, 757
BceAI	ACGGC	1 cut(s)	784
BciVI	GTATCC	1 cut(s)	657
BclI	TGATCA	1 cut(s)	88
BcoDI	GTCTC	1 cut(s)	739
BfaI	CTAG	1 cut(s)	132
BfuI	GTATCC	1 cut(s)	657
Bme18I	GGWCC	1 cut(s)	392
BmgT120I	GGNCC	3 cut(s)	392, 581, 582
BmiI	GGNNCC	3 cut(s)	310, 582, 583
BmsI	GCATC	3 cut(s)	217, 282, 437
BoxI	GACNNNNGTC	1 cut(s)	612
BplI	GAGNNNNNCTC	2 cut(s)	250, 282
Bpu10I	CCTNAGC	3 cut(s)	823, 879, 933
BpuEI	CTTGAG	1 cut(s)	252
BsaBI	GATNNNNATC	2 cut(s)	231, 384
BsaHI	GRCGYC	1 cut(s)	732
BsaJI	CCNNGG	3 cut(s)	444, 585, 916
BsaWI	WCCGGW	4 cut(s)	152, 191, 642, 949
BsaXI	ACNNNNNCTCC	2 cut(s)	931, 961
Bsc4I	CCNNNNNNNGG	1 cut(s)	578
Bse118I	RCCGGY	2 cut(s)	191, 642
Bse1I	ACTGG	1 cut(s)	616
Bse8I	GATNNNNATC	2 cut(s)	231, 384
BseDI	CCNNGG	3 cut(s)	444, 585, 916
BseGI	GGATG	7 cut(s)	91, 232, 428, 812, 868, 922, 983
BseJI	GATNNNNATC	2 cut(s)	231, 384
BseLI	CCNNNNNNNGG	1 cut(s)	578
BseMII	CTCAG	5 cut(s)	268, 837, 893, 947, 1002
BseNI	ACTGG	1 cut(s)	616
BseSI	GKGCMC	1 cut(s)	585
Bsh1236I	CGCG	2 cut(s)	803, 859
Bsh1285I	CGRYCG	1 cut(s)	667
BshFI	GGCC	2 cut(s)	547, 583
BshTI	ACCGGT	2 cut(s)	191, 642
BsiEI	CGRYCG	1 cut(s)	667
BsiHKAI	GWGCWC	1 cut(s)	453
BsiSI	CCGG	4 cut(s)	153, 192, 643, 950
BslFI	GGGAC	1 cut(s)	449
BslI	CCNNNNNNNGG	1 cut(s)	578
BsmAI	GTCTC	1 cut(s)	739
BsmBI	CGTCTC	1 cut(s)	739
BsmFI	GGGAC	1 cut(s)	449
BsmI	GAATGC	1 cut(s)	430
BsnI	GGCC	2 cut(s)	547, 583
Bsp120I	GGGCCC	1 cut(s)	581
Bsp1286I	GDGCHC	2 cut(s)	453, 585
Bsp143I	GATC	3 cut(s)	88, 379, 664
Bsp19I	CCATGG	1 cut(s)	585
BspACI	CCGC	1 cut(s)	601
BspANI	GGCC	2 cut(s)	547, 583
BspCNI	CTCAG	5 cut(s)	267, 836, 892, 946, 1001
BspFNI	CGCG	2 cut(s)	803, 859
BspLI	GGNNCC	3 cut(s)	310, 582, 583
BsrFI	RCCGGY	2 cut(s)	191, 642
BsrI	ACTGG	1 cut(s)	616
BssAI	RCCGGY	2 cut(s)	191, 642
BssECI	CCNNGG	3 cut(s)	444, 585, 916
BssMI	GATC	3 cut(s)	88, 379, 664
BssNI	GRCGYC	1 cut(s)	732
BssT1I	CCWWGG	3 cut(s)	444, 585, 916
Bst4CI	ACNGT	4 cut(s)	799, 855, 909, 965
BstACI	GRCGYC	1 cut(s)	732
BstDEI	CTNAG	5 cut(s)	254, 823, 879, 933, 988
BstDSI	CCRYGG	1 cut(s)	585
BstF5I	GGATG	7 cut(s)	91, 232, 428, 812, 868, 922, 983
BstFNI	CGCG	2 cut(s)	803, 859
BstHHI	GCGC	3 cut(s)	805, 861, 885
BstKTI	GATC	3 cut(s)	91, 382, 667
BstMAI	GTCTC	1 cut(s)	739
BstMBI	GATC	3 cut(s)	88, 379, 664
BstMCI	CGRYCG	1 cut(s)	667
BstMWI	GCNNNNNNNGC	1 cut(s)	105
BstPAI	GACNNNNGTC	1 cut(s)	612
BstSLI	GKGCMC	1 cut(s)	585
BstUI	CGCG	2 cut(s)	803, 859
BstXI	CCANNNNNNTGG	1 cut(s)	402
BsuI	GTATCC	1 cut(s)	657
BsuRI	GGCC	2 cut(s)	547, 583
BtgI	CCRYGG	1 cut(s)	585
BtsCI	GGATG	7 cut(s)	91, 232, 428, 812, 868, 922, 983
BtsIMutI	CAGTG	2 cut(s)	417, 609
CaiI	CAGNNNCTG	1 cut(s)	282
CfoI	GCGC	3 cut(s)	805, 861, 885
Cfr10I	RCCGGY	2 cut(s)	191, 642
Cfr13I	GGNCC	3 cut(s)	392, 581, 582
CspAI	ACCGGT	2 cut(s)	191, 642
CviAII	CATG	4 cut(s)	77, 341, 586, 745
CviJI	RGCY	9 cut(s)	99, 135, 261, 418, 451, 508, 547, 583, 717
CviKI_1	RGCY	9 cut(s)	99, 135, 261, 418, 451, 508, 547, 583, 717
DdeI	CTNAG	5 cut(s)	254, 823, 879, 933, 988
DpnI	GATC	3 cut(s)	90, 381, 666
DpnII	GATC	3 cut(s)	88, 379, 664
DrdI	GACNNNNNNGTC	4 cut(s)	731, 817, 873, 927
DseDI	GACNNNNNNGTC	4 cut(s)	731, 817, 873, 927
Ecl136II	GAGCTC	1 cut(s)	451
Eco130I	CCWWGG	3 cut(s)	444, 585, 916
Eco147I	AGGCCT	1 cut(s)	547
Eco24I	GRGCYC	2 cut(s)	453, 585
Eco47I	GGWCC	1 cut(s)	392
Eco53kI	GAGCTC	1 cut(s)	451
EcoICRI	GAGCTC	1 cut(s)	451
EcoO109I	RGGNCCY	1 cut(s)	581
EcoRI	GAATTC	1 cut(s)	516
EcoT14I	CCWWGG	3 cut(s)	444, 585, 916
EcoT22I	ATGCAT	1 cut(s)	430
EcoT38I	GRGCYC	2 cut(s)	453, 585
ErhI	CCWWGG	3 cut(s)	444, 585, 916
Esp3I	CGTCTC	1 cut(s)	739
FaeI	CATG	4 cut(s)	80, 344, 589, 748
FaqI	GGGAC	1 cut(s)	449
FatI	CATG	4 cut(s)	76, 340, 585, 744
FbaI	TGATCA	1 cut(s)	88
FblI	GTMKAC	1 cut(s)	186
FokI	GGATG	7 cut(s)	98, 219, 415, 799, 855, 909, 970
FriOI	GRGCYC	2 cut(s)	453, 585
FspBI	CTAG	1 cut(s)	132
GlaI	GCGC	3 cut(s)	804, 860, 884
HaeIII	GGCC	2 cut(s)	547, 583
HapII	CCGG	4 cut(s)	153, 192, 643, 950
HhaI	GCGC	3 cut(s)	805, 861, 885
Hin1I	GRCGYC	1 cut(s)	732
Hin1II	CATG	4 cut(s)	80, 344, 589, 748
Hin6I	GCGC	3 cut(s)	803, 859, 883
HinP1I	GCGC	3 cut(s)	803, 859, 883
HincII	GTYRAC	2 cut(s)	187, 787
HindII	GTYRAC	2 cut(s)	187, 787
HindIII	AAGCTT	1 cut(s)	416
HinfI	GANTC	3 cut(s)	173, 322, 407
HpaI	GTTAAC	1 cut(s)	787
HpaII	CCGG	4 cut(s)	153, 192, 643, 950
HphI	GGTGA	2 cut(s)	206, 511
Hpy166II	GTNNAC	3 cut(s)	187, 502, 787
Hpy188I	TCNGA	4 cut(s)	172, 754, 976, 991
Hpy188III	TCNNGA	5 cut(s)	256, 277, 513, 662, 673
Hpy8I	GTNNAC	3 cut(s)	187, 502, 787
Hpy99I	CGWCG	6 cut(s)	188, 734, 803, 859, 913, 969
HpyCH4III	ACNGT	4 cut(s)	799, 855, 909, 965
HpyCH4IV	ACGT	1 cut(s)	732
HpyCH4V	TGCA	4 cut(s)	80, 340, 428, 635
HpyF10VI	GCNNNNNNNGC	1 cut(s)	105
HpyF3I	CTNAG	5 cut(s)	254, 823, 879, 933, 988
HpySE526I	ACGT	1 cut(s)	732
Hsp92I	GRCGYC	1 cut(s)	732
Hsp92II	CATG	4 cut(s)	80, 344, 589, 748
HspAI	GCGC	3 cut(s)	803, 859, 883
Ksp22I	TGATCA	1 cut(s)	88
KspAI	GTTAAC	1 cut(s)	787
Kzo9I	GATC	3 cut(s)	88, 379, 664
LmnI	GCTCC	3 cut(s)	72, 258, 448
LweI	GCATC	3 cut(s)	217, 282, 437
MaeI	CTAG	1 cut(s)	132
MaeII	ACGT	1 cut(s)	732
MaeIII	GTNAC	4 cut(s)	148, 200, 366, 439
MalI	GATC	3 cut(s)	90, 381, 666
MboI	GATC	3 cut(s)	88, 379, 664
MboII	GAAGA	1 cut(s)	53
MhlI	GDGCHC	2 cut(s)	453, 585
MluCI	AATT	8 cut(s)	156, 330, 346, 374, 397, 516, 617, 628
MlyI	GAGTC	1 cut(s)	167
MnlI	CCTC	8 cut(s)	246, 276, 558, 832, 888, 942, 991, 997
Mph1103I	ATGCAT	1 cut(s)	430
MseI	TTAA	7 cut(s)	57, 542, 684, 786, 843, 897, 960
MspI	CCGG	4 cut(s)	153, 192, 643, 950
Mva1269I	GAATGC	1 cut(s)	430
MvnI	CGCG	2 cut(s)	803, 859
MwoI	GCNNNNNNNGC	1 cut(s)	105
NcoI	CCATGG	1 cut(s)	585
NdeII	GATC	3 cut(s)	88, 379, 664
NlaIII	CATG	4 cut(s)	80, 344, 589, 748
NlaIV	GGNNCC	3 cut(s)	310, 582, 583
NsiI	ATGCAT	1 cut(s)	430
PceI	AGGCCT	1 cut(s)	547
PcsI	WCGNNNNNNNCGW	1 cut(s)	660
PctI	GAATGC	1 cut(s)	430
PfeI	GAWTC	2 cut(s)	322, 407
PinAI	ACCGGT	2 cut(s)	191, 642
Ple19I	CGATCG	1 cut(s)	667
PleI	GAGTC	1 cut(s)	167
PpsI	GAGTC	1 cut(s)	167
PshAI	GACNNNNGTC	1 cut(s)	612
Psp124BI	GAGCTC	1 cut(s)	453
PspN4I	GGNNCC	3 cut(s)	310, 582, 583
PspOMI	GGGCCC	1 cut(s)	581
PspPI	GGNCC	3 cut(s)	392, 581, 582
PstNI	CAGNNNCTG	1 cut(s)	282
PvuI	CGATCG	1 cut(s)	667
SacI	GAGCTC	1 cut(s)	453
SalI	GTCGAC	1 cut(s)	185
SaqAI	TTAA	7 cut(s)	57, 542, 684, 786, 843, 897, 960
Sau3AI	GATC	3 cut(s)	88, 379, 664
Sau96I	GGNCC	3 cut(s)	392, 581, 582
SchI	GAGTC	1 cut(s)	167
SduI	GDGCHC	2 cut(s)	453, 585
SfaNI	GCATC	3 cut(s)	217, 282, 437
SgrAI	CRCCGGYG	1 cut(s)	191
SinI	GGWCC	1 cut(s)	392
SmlI	CTYRAG	1 cut(s)	267
SmoI	CTYRAG	1 cut(s)	267
Sse9I	AATT	8 cut(s)	156, 330, 346, 374, 397, 516, 617, 628
SseBI	AGGCCT	1 cut(s)	547
SsiI	CCGC	1 cut(s)	601
SspI	AATATT	2 cut(s)	221, 317
SspMI	CTAG	1 cut(s)	132
SstI	GAGCTC	1 cut(s)	453
StuI	AGGCCT	1 cut(s)	547
StyI	CCWWGG	3 cut(s)	444, 585, 916
TaaI	ACNGT	4 cut(s)	799, 855, 909, 965
TaiI	ACGT	1 cut(s)	735
TaqI	TCGA	9 cut(s)	186, 225, 325, 537, 606, 654, 663, 693, 967
TasI	AATT	8 cut(s)	156, 330, 346, 374, 397, 516, 617, 628
TfiI	GAWTC	2 cut(s)	322, 407
Tru1I	TTAA	7 cut(s)	57, 542, 684, 786, 843, 897, 960
Tru9I	TTAA	7 cut(s)	57, 542, 684, 786, 843, 897, 960
TscAI	CASTG	2 cut(s)	417, 616
TspDTI	ATGAA	5 cut(s)	13, 65, 91, 196, 437
TspRI	CASTG	2 cut(s)	417, 616
VpaK11BI	GGWCC	1 cut(s)	392
XapI	RAATTY	3 cut(s)	374, 397, 516
XmiI	GTMKAC	1 cut(s)	186
XspI	CTAG	1 cut(s)	132
ZraI	GACGTC	1 cut(s)	733
Zsp2I	ATGCAT	1 cut(s)	430

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.