Rh3BG247100

F-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000142
Physical Location & Seq
Forward (+)
23507690 .. 23508874
1185 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG247100.1

Sequence Viewer

Length: 1185 bp
ATGGATGACTACAACAGGTGGTCCAAGCATCTCCCTGATGATTTGATTGAGATGATTGTGAAGCGTCTAACCCTAGTCGATTCAATCAGATTCGCTGCTGTGTGTCCTTCTTGGAGAAGTGTATCGTCACAATGGTTTCAACGAGTAACCCGACTTCCATGGCTCTTGAAATCGATTAAGTTTCTAGACTCAGAATTTGTGGATTATAATATCTACAGTCCAAGTGAAGACACAGACTACGACCTCAAGTTTCGAAGAGAAAATAATAAGTTGGATGCTTCACGTAGTAATAAGATACGTTGCTCCGGCTCTATTAATGGCTGGTTGATTATGTCTGAATGGACGTCGAAGAAGAATTTGATTCACCCTGCTAAGACGACTTCCATCAATTATTTCTTGAACCCAATGACAGGTGATCGTATTAAGCTTCCCCAGCTGACCGGAATCATCCCATGGAGCTCCGCGGCCTCTTCGGATCCAAGATGTTCTGATTGCATTGTTGCAATCTCTCCAGATCTAGGACGTTCTGATAGCGATATTGCAATTGAAGGCGGGACGAAGTTGGTGTTTTGCAGGCCAGGTAGTCATGAATCATGCCCTTTGGAAGGGCAAAAACGTTATATAGCTTACGTTAAATTTCATGAGGATGGCAAGTTATACGTATTAGAACTGCCTGCTGATATGCATGATTATATACTTGTTGTTCTTGTTCTTGTTTCTGTTCCTGTTTTAGATCCGTTAAATCAATGTCAAGGCAAAGGCAGGTGTGAGAAAATTATTGCTTATAGGGAAAAGACAATATTAGCTGCAATGCCATCAGGGGATTCGCCGGCCTGCATTGGGAGCCCATCATTTTTCTGGTCCTCCAAAGGTGAGTTTATACTGGTTTGGGAGCGATATTGGCCCGGCAGGAAATTTCGTGCGTTAAAGATGGATGATAAAAGTGGTTATAATCCTGTTTGGGTGGACTTGGAGACGAATGATGTTGCTGAAGACGAAGTAGTCTTAGTATCCGCCTCACACATGACACACAGCACCTCAATGTCAAAGTTGAAGACATTTATGACAACCATAGACGAGGCTTTTCTTGGACTTTGTTGCGGAAAATTCTGCACCTGCCATGGTTCGTTGAATTGTGAGAATCTTTTACCTGGGGTCTGGTTTACGCCCAATATAACCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

394

Amino Acids

44.67

Weight (kDa)

6.71

Isoelectric Point (pI)

45.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 10 - 42 2.2e-07 F-box domain
Beta-prop_KIB1-4 PF03478 74 - 350 5e-15 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000142)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 207, 951
AarI CACCTGC 2 cut(s) 753, 1124
AasI GACNNNNNNGTC 1 cut(s) 1001
AatII GACGTC 1 cut(s) 347
Acc36I ACCTGC 2 cut(s) 753, 1124
AccII CGCG 1 cut(s) 464
AciI CCGC 5 cut(s) 462, 464, 552, 1014, 1101
AclI AACGTT 1 cut(s) 616
AclWI GGATC 3 cut(s) 470, 483, 728
AcsI RAATTY 5 cut(s) 194, 355, 635, 914, 1106
AcuI CTGAAG 1 cut(s) 1011
AcyI GRCGYC 1 cut(s) 344
AfiI CCNNNNNNNGG 4 cut(s) 410, 518, 605, 840
AgsI TTSAA 7 cut(s) 84, 140, 169, 400, 548, 1054, 1132
AjnI CCWGG 2 cut(s) 577, 1150
AluBI AGCT 5 cut(s) 427, 436, 459, 626, 806
AluI AGCT 5 cut(s) 427, 436, 459, 626, 806
Alw21I GWGCWC 1 cut(s) 461
Alw26I GTCTC 1 cut(s) 968
AlwI GGATC 3 cut(s) 470, 483, 728
AoxI GGCC 4 cut(s) 465, 575, 831, 902
ApeKI GCWGC 2 cut(s) 95, 806
ApoI RAATTY 5 cut(s) 194, 355, 635, 914, 1106
ArsI GACNNNNNNTTYG 2 cut(s) 179, 211
AseI ATTAAT 1 cut(s) 315
AspS9I GGNCC 3 cut(s) 21, 861, 903
AsuC2I CCSGG 1 cut(s) 906
AsuHPI GGTGA 3 cut(s) 356, 425, 884
AsuII TTCGAA 1 cut(s) 253
AvaII GGWCC 2 cut(s) 21, 861
BamHI GGATCC 1 cut(s) 475
BanII GRGCYC 2 cut(s) 461, 848
BarI GAAGNNNNNNTAC 2 cut(s) 138, 170
BbsI GAAGAC 3 cut(s) 234, 999, 1061
Bbv12I GWGCWC 1 cut(s) 461
BbvI GCAGC 2 cut(s) 82, 793
BccI CCATC 5 cut(s) 392, 641, 823, 856, 925
BciT130I CCWGG 2 cut(s) 579, 1152
BciVI GTATCC 1 cut(s) 1021
BcnI CCSGG 1 cut(s) 906
BcoDI GTCTC 1 cut(s) 968
BfaI CTAG 3 cut(s) 74, 185, 518
BfmI CTRYAG 1 cut(s) 214
BfuAI ACCTGC 2 cut(s) 753, 1124
BfuI GTATCC 1 cut(s) 1021
BglII AGATCT 1 cut(s) 514
BisI GCNGC 3 cut(s) 96, 465, 807
BlsI GCNGC 3 cut(s) 97, 466, 808
Bme1390I CCNGG 3 cut(s) 579, 906, 1152
Bme18I GGWCC 2 cut(s) 21, 861
BmgT120I GGNCC 3 cut(s) 21, 861, 903
BmiI GGNNCC 2 cut(s) 477, 845
BmrFI CCNGG 3 cut(s) 579, 906, 1152
BmsI GCATC 2 cut(s) 37, 265
BpiI GAAGAC 3 cut(s) 234, 999, 1061
BpmI CTGGAG 1 cut(s) 495
Bpu14I TTCGAA 1 cut(s) 253
BpuEI CTTGAG 1 cut(s) 230
BpuMI CCSGG 1 cut(s) 906
Bsa29I ATCGAT 1 cut(s) 173
BsaAI YACGTR 2 cut(s) 284, 661
BsaHI GRCGYC 1 cut(s) 344
BsaJI CCNNGG 5 cut(s) 158, 452, 462, 1120, 1151
BsaWI WCCGGW 1 cut(s) 440
Bsc4I CCNNNNNNNGG 4 cut(s) 410, 518, 605, 840
Bse118I RCCGGY 1 cut(s) 829
Bse1I ACTGG 1 cut(s) 888
Bse3DI GCAATG 1 cut(s) 816
BseBI CCWGG 2 cut(s) 579, 1152
BseCI ATCGAT 1 cut(s) 173
BseDI CCNNGG 5 cut(s) 158, 452, 462, 1120, 1151
BseGI GGATG 5 cut(s) 10, 280, 447, 652, 940
BseLI CCNNNNNNNGG 4 cut(s) 410, 518, 605, 840
BseMI GCAATG 1 cut(s) 816
BseMII CTCAG 1 cut(s) 204
BseNI ACTGG 1 cut(s) 888
BseXI GCAGC 2 cut(s) 82, 793
BseYI CCCAGC 1 cut(s) 432
BsgI GTGCAG 1 cut(s) 1096
Bsh1236I CGCG 1 cut(s) 464
BshFI GGCC 4 cut(s) 467, 577, 833, 904
BshVI ATCGAT 1 cut(s) 173
BsiHKAI GWGCWC 1 cut(s) 461
BsiSI CCGG 4 cut(s) 306, 441, 830, 906
BslFI GGGAC 1 cut(s) 568
BslI CCNNNNNNNGG 4 cut(s) 410, 518, 605, 840
BsmAI GTCTC 1 cut(s) 968
BsmBI CGTCTC 1 cut(s) 968
BsmFI GGGAC 1 cut(s) 568
BsnI GGCC 4 cut(s) 467, 577, 833, 904
Bsp119I TTCGAA 1 cut(s) 253
Bsp1286I GDGCHC 2 cut(s) 461, 848
Bsp143I GATC 4 cut(s) 415, 475, 514, 733
Bsp19I CCATGG 3 cut(s) 158, 452, 1120
BspACI CCGC 5 cut(s) 462, 464, 552, 1014, 1101
BspANI GGCC 4 cut(s) 467, 577, 833, 904
BspCNI CTCAG 1 cut(s) 203
BspDI ATCGAT 1 cut(s) 173
BspFNI CGCG 1 cut(s) 464
BspHI TCATGA 2 cut(s) 586, 640
BspLI GGNNCC 2 cut(s) 477, 845
BspMI ACCTGC 2 cut(s) 753, 1124
BspPI GGATC 3 cut(s) 470, 483, 728
BspT104I TTCGAA 1 cut(s) 253
BsrDI GCAATG 1 cut(s) 816
BsrFI RCCGGY 1 cut(s) 829
BsrI ACTGG 1 cut(s) 888
BssAI RCCGGY 1 cut(s) 829
BssECI CCNNGG 5 cut(s) 158, 452, 462, 1120, 1151
BssMI GATC 4 cut(s) 415, 475, 514, 733
BssNI GRCGYC 1 cut(s) 344
BssT1I CCWWGG 3 cut(s) 158, 452, 1120
Bst2UI CCWGG 2 cut(s) 579, 1152
Bst4CI ACNGT 1 cut(s) 218
Bst6I CTCTTC 2 cut(s) 250, 475
BstACI GRCGYC 1 cut(s) 344
BstBAI YACGTR 2 cut(s) 284, 661
BstBI TTCGAA 1 cut(s) 253
BstC8I GCNNGC 4 cut(s) 575, 675, 831, 835
BstDEI CTNAG 3 cut(s) 190, 372, 1006
BstDSI CCRYGG 4 cut(s) 158, 452, 462, 1120
BstENI CCTNNNNNAGG 1 cut(s) 603
BstF5I GGATG 5 cut(s) 10, 280, 447, 652, 940
BstFNI CGCG 1 cut(s) 464
BstKTI GATC 4 cut(s) 418, 478, 517, 736
BstMAI GTCTC 1 cut(s) 968
BstMBI GATC 4 cut(s) 415, 475, 514, 733
BstMWI GCNNNNNNNGC 3 cut(s) 433, 843, 901
BstNI CCWGG 2 cut(s) 579, 1152
BstSCI CCNGG 3 cut(s) 577, 904, 1150
BstSFI CTRYAG 1 cut(s) 214
BstSNI TACGTA 1 cut(s) 661
BstUI CGCG 1 cut(s) 464
BstV1I GCAGC 2 cut(s) 82, 793
BstV2I GAAGAC 3 cut(s) 234, 999, 1061
BstX2I RGATCY 3 cut(s) 475, 514, 733
BstYI RGATCY 3 cut(s) 475, 514, 733
Bsu15I ATCGAT 1 cut(s) 173
BsuI GTATCC 1 cut(s) 1021
BsuRI GGCC 4 cut(s) 467, 577, 833, 904
BsuTUI ATCGAT 1 cut(s) 173
BtgI CCRYGG 4 cut(s) 158, 452, 462, 1120
BtsCI GGATG 5 cut(s) 10, 280, 447, 652, 940
BveI ACCTGC 2 cut(s) 753, 1124
Cac8I GCNNGC 4 cut(s) 575, 675, 831, 835
CciI TCATGA 2 cut(s) 586, 640
Cfr10I RCCGGY 1 cut(s) 829
Cfr13I GGNCC 3 cut(s) 21, 861, 903
Cfr42I CCGCGG 1 cut(s) 465
ClaI ATCGAT 1 cut(s) 173
CseI GACGC 1 cut(s) 53
CviAII CATG 8 cut(s) 159, 453, 587, 594, 641, 686, 1024, 1121
DdeI CTNAG 3 cut(s) 190, 372, 1006
DpnI GATC 4 cut(s) 417, 477, 516, 735
DpnII GATC 4 cut(s) 415, 475, 514, 733
DrdI GACNNNNNNGTC 1 cut(s) 1001
DseDI GACNNNNNNGTC 1 cut(s) 1001
Eam1104I CTCTTC 2 cut(s) 250, 475
EarI CTCTTC 2 cut(s) 250, 475
EciI GGCGGA 1 cut(s) 1003
Ecl136II GAGCTC 1 cut(s) 459
Eco105I TACGTA 1 cut(s) 661
Eco130I CCWWGG 3 cut(s) 158, 452, 1120
Eco24I GRGCYC 2 cut(s) 461, 848
Eco47I GGWCC 2 cut(s) 21, 861
Eco53kI GAGCTC 1 cut(s) 459
Eco57I CTGAAG 1 cut(s) 1011
EcoICRI GAGCTC 1 cut(s) 459
EcoNI CCTNNNNNAGG 1 cut(s) 603
EcoRII CCWGG 2 cut(s) 577, 1150
EcoT14I CCWWGG 3 cut(s) 158, 452, 1120
EcoT22I ATGCAT 1 cut(s) 687
EcoT38I GRGCYC 2 cut(s) 461, 848
ErhI CCWWGG 3 cut(s) 158, 452, 1120
Esp3I CGTCTC 1 cut(s) 968
FaeI CATG 8 cut(s) 162, 456, 590, 597, 644, 689, 1027, 1124
FaqI GGGAC 1 cut(s) 568
FatI CATG 8 cut(s) 158, 452, 586, 593, 640, 685, 1023, 1120
FauI CCCGC 1 cut(s) 545
Fnu4HI GCNGC 3 cut(s) 96, 465, 807
FokI GGATG 5 cut(s) 17, 287, 434, 659, 947
FriOI GRGCYC 2 cut(s) 461, 848
Fsp4HI GCNGC 3 cut(s) 96, 465, 807
FspBI CTAG 3 cut(s) 74, 185, 518
GluI GCNGC 3 cut(s) 96, 465, 807
GsaI CCCAGC 1 cut(s) 436
GsuI CTGGAG 1 cut(s) 495
HaeIII GGCC 4 cut(s) 467, 577, 833, 904
HapII CCGG 4 cut(s) 306, 441, 830, 906
HgaI GACGC 1 cut(s) 53
Hin1I GRCGYC 1 cut(s) 344
Hin1II CATG 8 cut(s) 162, 456, 590, 597, 644, 689, 1027, 1124
HindIII AAGCTT 1 cut(s) 425
HinfI GANTC 8 cut(s) 80, 90, 188, 361, 444, 590, 824, 1141
HpaII CCGG 4 cut(s) 306, 441, 830, 906
HphI GGTGA 3 cut(s) 356, 425, 884
Hpy166II GTNNAC 2 cut(s) 967, 1164
Hpy188I TCNGA 6 cut(s) 89, 193, 337, 475, 490, 529
Hpy188III TCNNGA 6 cut(s) 166, 185, 397, 512, 587, 641
Hpy8I GTNNAC 2 cut(s) 967, 1164
Hpy99I CGWCG 1 cut(s) 349
HpyAV CCTTC 3 cut(s) 117, 542, 599
HpyCH4III ACNGT 1 cut(s) 218
HpyCH4IV ACGT 7 cut(s) 283, 298, 344, 523, 616, 630, 660
HpyCH4V TGCA 8 cut(s) 495, 503, 542, 573, 685, 809, 837, 1113
HpyF10VI GCNNNNNNNGC 3 cut(s) 433, 843, 901
HpyF3I CTNAG 3 cut(s) 190, 372, 1006
HpySE526I ACGT 7 cut(s) 283, 298, 344, 523, 616, 630, 660
Hsp92I GRCGYC 1 cut(s) 344
Hsp92II CATG 8 cut(s) 162, 456, 590, 597, 644, 689, 1027, 1124
KroI GCCGGC 1 cut(s) 829
KroNI GCCGGC 1 cut(s) 831
KspI CCGCGG 1 cut(s) 465
Kzo9I GATC 4 cut(s) 415, 475, 514, 733
LmnI GCTCC 5 cut(s) 308, 456, 464, 843, 892
Lsp1109I GCAGC 2 cut(s) 82, 793
LweI GCATC 2 cut(s) 37, 265
MaeI CTAG 3 cut(s) 74, 185, 518
MaeII ACGT 7 cut(s) 283, 298, 344, 523, 616, 630, 660
MaeIII GTNAC 2 cut(s) 126, 145
MalI GATC 4 cut(s) 417, 477, 516, 735
MboI GATC 4 cut(s) 415, 475, 514, 733
MboII GAAGA 7 cut(s) 239, 267, 361, 364, 462, 1004, 1066
MfeI CAATTG 1 cut(s) 543
MflI RGATCY 3 cut(s) 475, 514, 733
MhlI GDGCHC 2 cut(s) 461, 848
MluCI AATT 9 cut(s) 194, 355, 388, 543, 635, 774, 914, 1106, 1132
MlyI GAGTC 1 cut(s) 182
MmeI TCCRAC 1 cut(s) 252
MnlI CCTC 7 cut(s) 254, 478, 637, 874, 1027, 1048, 1072
Mph1103I ATGCAT 1 cut(s) 687
MroNI GCCGGC 1 cut(s) 829
MseI TTAA 6 cut(s) 177, 315, 423, 633, 740, 926
MslI CAYNNNNRTG 2 cut(s) 645, 1040
MspA1I CMGCKG 2 cut(s) 436, 464
MspI CCGG 4 cut(s) 306, 441, 830, 906
MspR9I CCNGG 3 cut(s) 579, 906, 1152
MunI CAATTG 1 cut(s) 543
MvaI CCWGG 2 cut(s) 579, 1152
MvnI CGCG 1 cut(s) 464
MwoI GCNNNNNNNGC 3 cut(s) 433, 843, 901
NaeI GCCGGC 1 cut(s) 831
NciI CCSGG 1 cut(s) 906
NcoI CCATGG 3 cut(s) 158, 452, 1120
NdeII GATC 4 cut(s) 415, 475, 514, 733
NgoMIV GCCGGC 1 cut(s) 829
NlaIII CATG 8 cut(s) 162, 456, 590, 597, 644, 689, 1027, 1124
NlaIV GGNNCC 2 cut(s) 477, 845
NmuCI GTSAC 1 cut(s) 126
NsiI ATGCAT 1 cut(s) 687
NspV TTCGAA 1 cut(s) 253
PagI TCATGA 2 cut(s) 586, 640
PaqCI CACCTGC 2 cut(s) 753, 1124
PcsI WCGNNNNNNNCGW 1 cut(s) 148
PdiI GCCGGC 1 cut(s) 831
PfeI GAWTC 7 cut(s) 80, 90, 361, 444, 590, 824, 1141
PkrI GCNGC 3 cut(s) 97, 466, 808
PleI GAGTC 1 cut(s) 182
PpsI GAGTC 1 cut(s) 182
Ppu21I YACGTR 2 cut(s) 284, 661
PshBI ATTAAT 1 cut(s) 315
PsiI TTATAA 2 cut(s) 207, 951
Psp124BI GAGCTC 1 cut(s) 461
Psp1406I AACGTT 1 cut(s) 616
Psp6I CCWGG 2 cut(s) 577, 1150
PspFI CCCAGC 1 cut(s) 432
PspGI CCWGG 2 cut(s) 577, 1150
PspN4I GGNNCC 2 cut(s) 477, 845
PspPI GGNCC 3 cut(s) 21, 861, 903
PsuI RGATCY 3 cut(s) 475, 514, 733
PvuII CAGCTG 1 cut(s) 436
RseI CAYNNNNRTG 2 cut(s) 645, 1040
SacI GAGCTC 1 cut(s) 461
SacII CCGCGG 1 cut(s) 465
SaqAI TTAA 6 cut(s) 177, 315, 423, 633, 740, 926
SatI GCNGC 3 cut(s) 96, 465, 807
Sau3AI GATC 4 cut(s) 415, 475, 514, 733
Sau96I GGNCC 3 cut(s) 21, 861, 903
SchI GAGTC 1 cut(s) 182
ScrFI CCNGG 3 cut(s) 579, 906, 1152
SduI GDGCHC 2 cut(s) 461, 848
SfaNI GCATC 2 cut(s) 37, 265
SfcI CTRYAG 1 cut(s) 214
Sfr303I CCGCGG 1 cut(s) 465
SfuI TTCGAA 1 cut(s) 253
SgrBI CCGCGG 1 cut(s) 465
SinI GGWCC 2 cut(s) 21, 861
SmiMI CAYNNNNRTG 2 cut(s) 645, 1040
SmlI CTYRAG 1 cut(s) 245
SmoI CTYRAG 1 cut(s) 245
SnaBI TACGTA 1 cut(s) 661
Sse9I AATT 9 cut(s) 194, 355, 388, 543, 635, 774, 914, 1106, 1132
SsiI CCGC 5 cut(s) 462, 464, 552, 1014, 1101
SspI AATATT 1 cut(s) 801
SspMI CTAG 3 cut(s) 74, 185, 518
SstI GAGCTC 1 cut(s) 461
StyD4I CCNGG 3 cut(s) 577, 904, 1150
StyI CCWWGG 3 cut(s) 158, 452, 1120
TaaI ACNGT 1 cut(s) 218
TaiI ACGT 7 cut(s) 286, 301, 347, 526, 619, 633, 663
TaqI TCGA 4 cut(s) 78, 173, 253, 347
TasI AATT 9 cut(s) 194, 355, 388, 543, 635, 774, 914, 1106, 1132
TauI GCSGC 1 cut(s) 467
TfiI GAWTC 7 cut(s) 80, 90, 361, 444, 590, 824, 1141
Tru1I TTAA 6 cut(s) 177, 315, 423, 633, 740, 926
Tru9I TTAA 6 cut(s) 177, 315, 423, 633, 740, 926
TseFI GTSAC 1 cut(s) 126
TseI GCWGC 2 cut(s) 95, 806
Tsp45I GTSAC 1 cut(s) 126
TspDTI ATGAA 2 cut(s) 603, 629
TspGWI ACGGA 1 cut(s) 726
VpaK11BI GGWCC 2 cut(s) 21, 861
VspI ATTAAT 1 cut(s) 315
XagI CCTNNNNNAGG 1 cut(s) 603
XapI RAATTY 5 cut(s) 194, 355, 635, 914, 1106
XbaI TCTAGA 1 cut(s) 184
XcmI CCANNNNNNNNNTGG 1 cut(s) 855
XspI CTAG 3 cut(s) 74, 185, 518
ZraI GACGTC 1 cut(s) 345
Zsp2I ATGCAT 1 cut(s) 687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.