Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000142

Physical Location & Seq

Genomic Coordinates Reverse (-)

76441715 .. 76442980

Gene Structure 1266 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G048940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1212 bp

ATGTCAATGTCAATGATGAAGGAGGAGGAGGAACAAGAGGAGAGGTGGTCGAAAGAACTTCCAGAACATATCTTGCAGTTGATCCCACAAAGGCTATGCATATCAGATTACCAATTGTTTCGCCAAGTATGCCCTAATTGGCGAGCCGCGGTTGATAAAGGCATCGCCACCAAGACTTGCCCTCCTGCTCCACAACTCCCATGGCTTTTGCTCAGGAGAGATCCCAAATTCTTCCCATCAATTAATATTGCCGATTACCCTCCTGGTCCCCCAAATCTAGAAGATGAGTCATTTGATGGTCCGCTGCCGATCCCTACTGCTTCCATAACTTGTCTTGGGTCAATTGGTTCATGGCTGATCGTAGCTGCTCATCAACAATGTGAGAATGATAACAGTACTACTGTCGTCAACTTGTTCTTGAATCCAGTATCTCGTGTCCGAGTGATGCTCCCATCGCAGTCTACCCTTAAAACCTCCTTCAGCGGCAATTCAACCATGTTATTCAACAAAATTGTAGCCTCTTCACCGCCAGAGCCAACGACAGGGCTGCAGAAGGAGGACTGTCTTTTGGCTGGTCTTGTTCATCCAGGTATCTTGGCTTTTTGTAGGCCGAATGATACATCATGGACCCTCATTGATCCCGACACCACTCCCCGATTTAGTGATATAGAAATATTTGATGGAAAATTATATGCTGTTACTAATAGCGGAAACGAGATGTTAATGGTGTTTGACATGGCCCCTGAAGATGCCAATGTCAGTAGCGCTAATAGGTACCTTAGCATTTGCTGGATCCCGTACCAGTATCTTCCTGGTTCAGAATGGGGATACCCTTGCCTAGCGAAAGAGTCTGCATCCAAGGAGTTGTTTATGGTTCTTCGTCAAAGGAATATAGAAGAAGGATTCAAAGTGTACAAGACCGACGGTAAGATTGACCGTCTGCATGGAAGAATGTGGGAGCCGGTTACTGACCTTGGTGATCGGATACTGTTTCTGAGCGACAAAAGTACTAATGTCATCAATGACAAGACACTTGGAAAAAACTGCATCTATTTTGCTTTCACTTGTAAACGTGGATATGATGGTGGATTTGGGGTGTATTCCTTGAAAGATAGCAGCATTACACAGCTATCTGGCCTTCCTGAGGATTATTCATCTATCATATCCGGTGCTAACAGTCAAACTCTTTGGTTCACACCATGTCCATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030684 GO:0030686 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904 GO:2000232

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT_2 Pescadillo_N

Protein Analysis

403

Amino Acids

45.19

Weight (kDa)

5.01

Isoelectric Point (pI)

50.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	19 - 53	2.9e-06	F-box domain
Beta-prop_KIB1-4	PF03478	99 - 368	2.2e-36	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000142)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica	MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica	Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis	pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis	RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata	RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora	Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa	Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha	Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana	Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	774
AccB1I	GGYRCC	1 cut(s)	774
AccI	GTMKAC	1 cut(s)	461
AccII	CGCG	1 cut(s)	149
AciI	CCGC	6 cut(s)	147, 149, 302, 483, 527, 708
AclWI	GGATC	6 cut(s)	76, 215, 304, 632, 787, 800
AcsI	RAATTY	1 cut(s)	227
AcuI	CTGAAG	2 cut(s)	463, 765
AfaI	GTAC	5 cut(s)	397, 776, 800, 914, 1009
AfeI	AGCGCT	1 cut(s)	766
AfiI	CCNNNNNNNGG	2 cut(s)	542, 1144
AgsI	TTSAA	5 cut(s)	421, 492, 505, 907, 1108
AjnI	CCWGG	3 cut(s)	262, 586, 811
AluBI	AGCT	2 cut(s)	365, 1129
AluI	AGCT	2 cut(s)	365, 1129
AlwI	GGATC	6 cut(s)	76, 215, 304, 632, 787, 800
Aor51HI	AGCGCT	1 cut(s)	766
AoxI	GGCC	3 cut(s)	608, 738, 1135
ApeKI	GCWGC	4 cut(s)	304, 365, 547, 1116
ApoI	RAATTY	1 cut(s)	227
AseI	ATTAAT	1 cut(s)	243
Asp718I	GGTACC	1 cut(s)	774
AspLEI	GCGC	1 cut(s)	767
AspS9I	GGNCC	4 cut(s)	266, 299, 627, 739
AsuHPI	GGTGA	2 cut(s)	516, 989
AvaII	GGWCC	3 cut(s)	266, 299, 627
AxyI	CCTNAGG	1 cut(s)	1143
BamHI	GGATCC	1 cut(s)	792
BanI	GGYRCC	1 cut(s)	774
BauI	CACGAG	1 cut(s)	432
BbvI	GCAGC	4 cut(s)	291, 352, 534, 1128
BccI	CCATC	5 cut(s)	244, 290, 460, 674, 1076
BcgI	CGANNNNNNTGC	2 cut(s)	529, 563
BciT130I	CCWGG	3 cut(s)	264, 588, 813
BciVI	GTATCC	2 cut(s)	821, 978
BfaI	CTAG	2 cut(s)	278, 839
BfmI	CTRYAG	1 cut(s)	548
BfoI	RGCGCY	1 cut(s)	768
BfuI	GTATCC	2 cut(s)	821, 978
BisI	GCNGC	6 cut(s)	147, 305, 366, 484, 548, 1117
BlsI	GCNGC	6 cut(s)	148, 306, 367, 485, 549, 1118
BmcAI	AGTACT	2 cut(s)	397, 1009
Bme1390I	CCNGG	3 cut(s)	264, 588, 813
Bme18I	GGWCC	3 cut(s)	266, 299, 627
BmgT120I	GGNCC	4 cut(s)	266, 299, 627, 739
BmiI	GGNNCC	6 cut(s)	268, 629, 741, 776, 794, 960
BmrFI	CCNGG	3 cut(s)	264, 588, 813
BmsI	GCATC	5 cut(s)	171, 435, 739, 863, 1056
BplI	GAGNNNNNCTC	2 cut(s)	432, 464
Bpu10I	CCTNAGC	2 cut(s)	212, 779
BsaJI	CCNNGG	4 cut(s)	147, 200, 858, 973
BsaWI	WCCGGW	1 cut(s)	1166
BsaXI	ACNNNNNCTCC	4 cut(s)	32, 62, 166, 196
Bsc4I	CCNNNNNNNGG	2 cut(s)	542, 1144
Bse118I	RCCGGY	1 cut(s)	961
Bse1I	ACTGG	2 cut(s)	425, 802
Bse21I	CCTNAGG	1 cut(s)	1143
BseBI	CCWGG	3 cut(s)	264, 588, 813
BseDI	CCNNGG	4 cut(s)	147, 200, 858, 973
BseGI	GGATG	2 cut(s)	583, 854
BseLI	CCNNNNNNNGG	2 cut(s)	542, 1144
BseMII	CTCAG	3 cut(s)	226, 986, 1134
BseNI	ACTGG	2 cut(s)	425, 802
BseRI	GAGGAG	3 cut(s)	38, 41, 53
BseXI	GCAGC	4 cut(s)	291, 352, 534, 1128
Bsh1236I	CGCG	1 cut(s)	149
BshFI	GGCC	3 cut(s)	610, 740, 1137
BshNI	GGYRCC	1 cut(s)	774
BsiSI	CCGG	2 cut(s)	962, 1167
BslFI	GGGAC	1 cut(s)	252
BslI	CCNNNNNNNGG	2 cut(s)	542, 1144
BsmFI	GGGAC	1 cut(s)	252
BsnI	GGCC	3 cut(s)	610, 740, 1137
Bsp1407I	TGTACA	1 cut(s)	912
Bsp143I	GATC	7 cut(s)	81, 220, 309, 357, 637, 792, 979
Bsp19I	CCATGG	1 cut(s)	200
BspACI	CCGC	6 cut(s)	147, 149, 302, 483, 527, 708
BspANI	GGCC	3 cut(s)	610, 740, 1137
BspCNI	CTCAG	3 cut(s)	225, 987, 1135
BspFNI	CGCG	1 cut(s)	149
BspLI	GGNNCC	6 cut(s)	268, 629, 741, 776, 794, 960
BspMAI	CTGCAG	1 cut(s)	552
BspPI	GGATC	6 cut(s)	76, 215, 304, 632, 787, 800
BspT107I	GGYRCC	1 cut(s)	774
BsrFI	RCCGGY	1 cut(s)	961
BsrGI	TGTACA	1 cut(s)	912
BsrI	ACTGG	2 cut(s)	425, 802
BssAI	RCCGGY	1 cut(s)	961
BssECI	CCNNGG	4 cut(s)	147, 200, 858, 973
BssMI	GATC	7 cut(s)	81, 220, 309, 357, 637, 792, 979
BssSI	CACGAG	1 cut(s)	432
BssT1I	CCWWGG	3 cut(s)	200, 858, 973
Bst2BI	CACGAG	1 cut(s)	432
Bst2UI	CCWGG	3 cut(s)	264, 588, 813
Bst4CI	ACNGT	7 cut(s)	395, 403, 563, 926, 938, 990, 1178
Bst6I	CTCTTC	1 cut(s)	526
BstAUI	TGTACA	1 cut(s)	912
BstC8I	GCNNGC	1 cut(s)	144
BstDEI	CTNAG	4 cut(s)	212, 779, 995, 1143
BstDSI	CCRYGG	2 cut(s)	147, 200
BstENI	CCTNNNNNAGG	1 cut(s)	1142
BstF5I	GGATG	2 cut(s)	583, 854
BstFNI	CGCG	1 cut(s)	149
BstH2I	RGCGCY	1 cut(s)	768
BstHHI	GCGC	1 cut(s)	767
BstKTI	GATC	7 cut(s)	84, 223, 312, 360, 640, 795, 982
BstMBI	GATC	7 cut(s)	81, 220, 309, 357, 637, 792, 979
BstMWI	GCNNNNNNNGC	2 cut(s)	129, 454
BstNI	CCWGG	3 cut(s)	264, 588, 813
BstSCI	CCNGG	3 cut(s)	262, 586, 811
BstSFI	CTRYAG	1 cut(s)	548
BstUI	CGCG	1 cut(s)	149
BstV1I	GCAGC	4 cut(s)	291, 352, 534, 1128
BstX2I	RGATCY	2 cut(s)	220, 792
BstYI	RGATCY	2 cut(s)	220, 792
Bsu36I	CCTNAGG	1 cut(s)	1143
BsuI	GTATCC	2 cut(s)	821, 978
BsuRI	GGCC	3 cut(s)	610, 740, 1137
BtgI	CCRYGG	2 cut(s)	147, 200
BtgZI	GCGATG	2 cut(s)	148, 438
BtsCI	GGATG	2 cut(s)	583, 854
Cac8I	GCNNGC	1 cut(s)	144
CfoI	GCGC	1 cut(s)	767
Cfr10I	RCCGGY	1 cut(s)	961
Cfr13I	GGNCC	4 cut(s)	266, 299, 627, 739
Cfr42I	CCGCGG	1 cut(s)	150
Csp6I	GTAC	5 cut(s)	396, 775, 799, 913, 1008
CviAII	CATG	7 cut(s)	201, 351, 496, 624, 736, 944, 1200
CviQI	GTAC	5 cut(s)	396, 775, 799, 913, 1008
DdeI	CTNAG	4 cut(s)	212, 779, 995, 1143
DpnI	GATC	7 cut(s)	83, 222, 311, 359, 639, 794, 981
DpnII	GATC	7 cut(s)	81, 220, 309, 357, 637, 792, 979
Eam1104I	CTCTTC	1 cut(s)	526
EarI	CTCTTC	1 cut(s)	526
Eco130I	CCWWGG	3 cut(s)	200, 858, 973
Eco47I	GGWCC	3 cut(s)	266, 299, 627
Eco47III	AGCGCT	1 cut(s)	766
Eco57I	CTGAAG	2 cut(s)	463, 765
Eco81I	CCTNAGG	1 cut(s)	1143
EcoNI	CCTNNNNNAGG	1 cut(s)	1142
EcoRII	CCWGG	3 cut(s)	262, 586, 811
EcoT14I	CCWWGG	3 cut(s)	200, 858, 973
EcoT22I	ATGCAT	1 cut(s)	101
ErhI	CCWWGG	3 cut(s)	200, 858, 973
FaeI	CATG	7 cut(s)	204, 354, 499, 627, 739, 947, 1203
FaqI	GGGAC	1 cut(s)	252
FatI	CATG	7 cut(s)	200, 350, 495, 623, 735, 943, 1199
FblI	GTMKAC	1 cut(s)	461
Fnu4HI	GCNGC	6 cut(s)	147, 305, 366, 484, 548, 1117
FokI	GGATG	2 cut(s)	570, 841
Fsp4HI	GCNGC	6 cut(s)	147, 305, 366, 484, 548, 1117
FspBI	CTAG	2 cut(s)	278, 839
GlaI	GCGC	1 cut(s)	766
GluI	GCNGC	6 cut(s)	147, 305, 366, 484, 548, 1117
HaeII	RGCGCY	1 cut(s)	768
HaeIII	GGCC	3 cut(s)	610, 740, 1137
HapII	CCGG	2 cut(s)	962, 1167
HhaI	GCGC	1 cut(s)	767
Hin1II	CATG	7 cut(s)	204, 354, 499, 627, 739, 947, 1203
Hin6I	GCGC	1 cut(s)	765
HinP1I	GCGC	1 cut(s)	765
HincII	GTYRAC	1 cut(s)	409
HindII	GTYRAC	1 cut(s)	409
HinfI	GANTC	4 cut(s)	287, 421, 848, 903
HpaII	CCGG	2 cut(s)	962, 1167
HphI	GGTGA	2 cut(s)	516, 989
Hpy166II	GTNNAC	5 cut(s)	409, 462, 913, 1070, 1194
Hpy188I	TCNGA	5 cut(s)	106, 440, 820, 984, 996
Hpy188III	TCNNGA	6 cut(s)	62, 214, 278, 418, 641, 1142
Hpy8I	GTNNAC	5 cut(s)	409, 462, 913, 1070, 1194
Hpy99I	CGWCG	1 cut(s)	926
HpyAV	CCTTC	5 cut(s)	13, 487, 547, 893, 1148
HpyCH4III	ACNGT	7 cut(s)	395, 403, 563, 926, 938, 990, 1178
HpyCH4IV	ACGT	1 cut(s)	1072
HpyCH4V	TGCA	6 cut(s)	76, 99, 550, 854, 943, 1047
HpyF10VI	GCNNNNNNNGC	2 cut(s)	129, 454
HpyF3I	CTNAG	4 cut(s)	212, 779, 995, 1143
HpySE526I	ACGT	1 cut(s)	1072
Hsp92II	CATG	7 cut(s)	204, 354, 499, 627, 739, 947, 1203
HspAI	GCGC	1 cut(s)	765
KpnI	GGTACC	1 cut(s)	778
KspI	CCGCGG	1 cut(s)	150
Kzo9I	GATC	7 cut(s)	81, 220, 309, 357, 637, 792, 979
LmnI	GCTCC	3 cut(s)	193, 453, 958
Lsp1109I	GCAGC	4 cut(s)	291, 352, 534, 1128
LweI	GCATC	5 cut(s)	171, 435, 739, 863, 1056
MaeI	CTAG	2 cut(s)	278, 839
MaeII	ACGT	1 cut(s)	1072
MaeIII	GTNAC	2 cut(s)	697, 964
MalI	GATC	7 cut(s)	83, 222, 311, 359, 639, 794, 981
MboI	GATC	7 cut(s)	81, 220, 309, 357, 637, 792, 979
MboII	GAAGA	8 cut(s)	223, 293, 513, 758, 800, 869, 908, 960
MfeI	CAATTG	2 cut(s)	113, 342
MflI	RGATCY	2 cut(s)	220, 792
MluCI	AATT	8 cut(s)	113, 136, 227, 240, 342, 487, 510, 686
MlyI	GAGTC	2 cut(s)	296, 857
Mph1103I	ATGCAT	1 cut(s)	101
MseI	TTAA	3 cut(s)	243, 468, 722
MspA1I	CMGCKG	3 cut(s)	149, 304, 483
MspI	CCGG	2 cut(s)	962, 1167
MspR9I	CCNGG	3 cut(s)	264, 588, 813
MunI	CAATTG	2 cut(s)	113, 342
MvaI	CCWGG	3 cut(s)	264, 588, 813
MvnI	CGCG	1 cut(s)	149
MwoI	GCNNNNNNNGC	2 cut(s)	129, 454
NcoI	CCATGG	1 cut(s)	200
NdeII	GATC	7 cut(s)	81, 220, 309, 357, 637, 792, 979
NlaIII	CATG	7 cut(s)	204, 354, 499, 627, 739, 947, 1203
NlaIV	GGNNCC	6 cut(s)	268, 629, 741, 776, 794, 960
NsiI	ATGCAT	1 cut(s)	101
PfeI	GAWTC	2 cut(s)	421, 903
PkrI	GCNGC	6 cut(s)	148, 306, 367, 485, 549, 1118
PleI	GAGTC	2 cut(s)	295, 856
PpsI	GAGTC	2 cut(s)	295, 856
PshBI	ATTAAT	1 cut(s)	243
Psp6I	CCWGG	3 cut(s)	262, 586, 811
PspGI	CCWGG	3 cut(s)	262, 586, 811
PspN4I	GGNNCC	6 cut(s)	268, 629, 741, 776, 794, 960
PspPI	GGNCC	4 cut(s)	266, 299, 627, 739
PstI	CTGCAG	1 cut(s)	552
PsuI	RGATCY	2 cut(s)	220, 792
RsaI	GTAC	5 cut(s)	397, 776, 800, 914, 1009
RsaNI	GTAC	5 cut(s)	396, 775, 799, 913, 1008
SacII	CCGCGG	1 cut(s)	150
SaqAI	TTAA	3 cut(s)	243, 468, 722
SatI	GCNGC	6 cut(s)	147, 305, 366, 484, 548, 1117
Sau3AI	GATC	7 cut(s)	81, 220, 309, 357, 637, 792, 979
Sau96I	GGNCC	4 cut(s)	266, 299, 627, 739
ScaI	AGTACT	2 cut(s)	397, 1009
SchI	GAGTC	2 cut(s)	296, 857
ScrFI	CCNGG	3 cut(s)	264, 588, 813
SetI	ASST	9 cut(s)	47, 367, 476, 592, 776, 780, 975, 1075, 1131
SfaNI	GCATC	5 cut(s)	171, 435, 739, 863, 1056
SfcI	CTRYAG	1 cut(s)	548
Sfr303I	CCGCGG	1 cut(s)	150
SgrBI	CCGCGG	1 cut(s)	150
SinI	GGWCC	3 cut(s)	266, 299, 627
Sse9I	AATT	8 cut(s)	113, 136, 227, 240, 342, 487, 510, 686
SsiI	CCGC	6 cut(s)	147, 149, 302, 483, 527, 708
SspI	AATATT	2 cut(s)	247, 675
SspMI	CTAG	2 cut(s)	278, 839
StyD4I	CCNGG	3 cut(s)	262, 586, 811
StyI	CCWWGG	3 cut(s)	200, 858, 973
TaaI	ACNGT	7 cut(s)	395, 403, 563, 926, 938, 990, 1178
TaiI	ACGT	1 cut(s)	1075
TaqI	TCGA	1 cut(s)	50
TaqII	GACCGA	1 cut(s)	935
TasI	AATT	8 cut(s)	113, 136, 227, 240, 342, 487, 510, 686
TatI	WGTACW	3 cut(s)	395, 912, 1007
TauI	GCSGC	2 cut(s)	149, 486
TfiI	GAWTC	2 cut(s)	421, 903
Tru1I	TTAA	3 cut(s)	243, 468, 722
Tru9I	TTAA	3 cut(s)	243, 468, 722
TseI	GCWGC	4 cut(s)	304, 365, 547, 1116
TspDTI	ATGAA	4 cut(s)	32, 339, 572, 1143
VpaK11BI	GGWCC	3 cut(s)	266, 299, 627
VspI	ATTAAT	1 cut(s)	243
XagI	CCTNNNNNAGG	1 cut(s)	1142
XapI	RAATTY	1 cut(s)	227
XbaI	TCTAGA	1 cut(s)	277
XcmI	CCANNNNNNNNNTGG	2 cut(s)	198, 809
XmiI	GTMKAC	1 cut(s)	461
XspI	CTAG	2 cut(s)	278, 839
ZrmI	AGTACT	2 cut(s)	397, 1009
Zsp2I	ATGCAT	1 cut(s)	101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.