Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000142

Physical Location & Seq

Genomic Coordinates Reverse (-)

35823464 .. 35824609

Gene Structure 1146 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g47170.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1146 bp

ATGGCTCAGACGATGGGGAAGAAGCAGAGCCTGCAGAGGTGGTCACAAGGGCTCCCAGATGATATCTTGCAATCGATAGCACACCAGCTATACATATCAGATTACATAGTGTTTCGTCAAGTATGCCCTTCTTGGCGAGCCGCTGTTGATAGAGGTATTGCCACCAGATCTTGCTCTCCTTCTCCTCATCAACCCCCATGGCTTTTGCTCCTCGACTCGTACGGCTTTTCCTTAGGGGATCGTGATTCTCTCGATGCATTCTATATCGAACACCAATACTCCCTTCTAAGGAGTCCAACATCTTTCAGATCAGAGACATCTTCTGCTTCTCATCACTTACGCGTACGGTCTTGTGTTGGTTCTGTGGAGTCGTGGCTGATCGTTACTATTCGTCAACAATGCCGCAGTAACAACTTCCTGTTTAATCCACTTTCCTGTGCCCGAGTCAAGCTCCCATCAGGTACCTTTTCCTTGTTCAAAACTGTAGCCTCTTCACCACCAGCACAATCAACAAAATGCTTCGTGGCTGCTCTTTGTTGTCTAAAACGATTGGGTATTTGTAGGCCAACTGATGCATCATGGACCCTCCTTGAGACCATGCAAGGGTTCGAATATAAAGACCTTGAAATAATTGATCAGAAATTATATGTTCTAGAGCTTAGGAATCACAGGTACACTGTACTGGAAATTGACTTGCTCTCTGGAGATGACAATGTCACTAGGGCCCAATACAATTGTAGCATCCACATATACATCCCGTATTTTACTGATTGGAATGGGAGAGACTGCGCTTGTCTAGTAGGAGATTCTACATCCAAGGAGTTGTTTGTAGTTCTTTGCACAAGTTCGACAGCAAAAGGAGTGCGAGTGTATAAGATCAAGAGGAACAGTAGTAGTGAAGGTAAGCCGTCCTGCGAGAAGGTTACTGACCTTGGTGATCGAATATTGTTTCTGAGCTCGAGAAGCAACAAGGTCATCAATGACCAGACACTTGGGAAAAACTGCATCTATTTTGCTTTCAAATTGACAGAAGGTTTTTGGGTGTATTCCTTGACGGATAGGAGCATCAGAAGGGTTAATTTGCCCAAGGATTACTCGGCTCAAAGTTGTGGGTCGACTCTTTGGTTCACACCACATCCGTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030684 GO:0030686 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904 GO:2000232

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT_2 Pescadillo_N

Protein Analysis

382

Amino Acids

43.24

Weight (kDa)

8.86

Isoelectric Point (pI)

55.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	110 - 339	3.8e-29	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000142)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica	MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica	Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis	pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis	RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata	RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora	Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa	Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha	Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana	Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	461
AccB1I	GGYRCC	1 cut(s)	461
AccI	GTMKAC	1 cut(s)	1115
AccII	CGCG	1 cut(s)	342
AciI	CCGC	2 cut(s)	141, 403
AclWI	GGATC	1 cut(s)	246
AfaI	GTAC	5 cut(s)	221, 345, 463, 674, 681
AfiI	CCNNNNNNNGG	2 cut(s)	288, 603
AflIII	ACRYGT	1 cut(s)	340
AgsI	TTSAA	3 cut(s)	478, 626, 1021
AjuI	GAANNNNNNNTTGG	2 cut(s)	267, 299
AleI	CACNNNNGTG	1 cut(s)	1138
AluBI	AGCT	4 cut(s)	88, 451, 658, 957
AluI	AGCT	4 cut(s)	88, 451, 658, 957
Alw21I	GWGCWC	1 cut(s)	959
Alw26I	GTCTC	3 cut(s)	308, 587, 777
AlwI	GGATC	1 cut(s)	246
AlwNI	CAGNNNCTG	1 cut(s)	31
Ama87I	CYCGRG	2 cut(s)	441, 958
AoxI	GGCC	2 cut(s)	563, 723
ApaI	GGGCCC	1 cut(s)	727
ApeKI	GCWGC	1 cut(s)	527
Asp718I	GGTACC	1 cut(s)	461
AspLEI	GCGC	1 cut(s)	791
AspS9I	GGNCC	3 cut(s)	582, 723, 724
AsuHPI	GGTGA	2 cut(s)	486, 947
AsuII	TTCGAA	1 cut(s)	609
AvaI	CYCGRG	2 cut(s)	441, 958
AvaII	GGWCC	1 cut(s)	582
AxyI	CCTNAGG	1 cut(s)	232
BaeGI	GKGCMC	2 cut(s)	442, 727
BanI	GGYRCC	1 cut(s)	461
BanII	GRGCYC	3 cut(s)	54, 727, 959
Bbv12I	GWGCWC	1 cut(s)	959
BbvI	GCAGC	1 cut(s)	514
BccI	CCATC	2 cut(s)	7, 463
BceAI	ACGGC	2 cut(s)	238, 892
BclI	TGATCA	1 cut(s)	634
BcoDI	GTCTC	3 cut(s)	308, 587, 777
BfaI	CTAG	3 cut(s)	653, 720, 797
BfmI	CTRYAG	2 cut(s)	32, 483
BglII	AGATCT	1 cut(s)	167
BisI	GCNGC	3 cut(s)	141, 403, 528
BlsI	GCNGC	3 cut(s)	142, 404, 529
Bme18I	GGWCC	1 cut(s)	582
BmeT110I	CYCGRG	2 cut(s)	441, 958
BmgT120I	GGNCC	3 cut(s)	582, 723, 724
BmiI	GGNNCC	4 cut(s)	53, 463, 584, 725
BmsI	GCATC	6 cut(s)	244, 562, 584, 750, 1014, 1074
BplI	GAGNNNNNCTC	2 cut(s)	435, 467
BpmI	CTGGAG	1 cut(s)	723
Bpu10I	CCTNAGC	1 cut(s)	659
Bpu14I	TTCGAA	1 cut(s)	609
BpuEI	CTTGAG	1 cut(s)	611
Bsa29I	ATCGAT	1 cut(s)	74
BsaI	GGTCTC	1 cut(s)	587
BsaJI	CCNNGG	5 cut(s)	197, 816, 931, 1086, 1139
BsaXI	ACNNNNNCTCC	6 cut(s)	36, 66, 263, 293, 852, 882
Bsc4I	CCNNNNNNNGG	2 cut(s)	288, 603
Bse1I	ACTGG	1 cut(s)	687
Bse21I	CCTNAGG	1 cut(s)	232
BseCI	ATCGAT	1 cut(s)	74
BseDI	CCNNGG	5 cut(s)	197, 816, 931, 1086, 1139
BseGI	GGATG	4 cut(s)	741, 753, 812, 1135
BseLI	CCNNNNNNNGG	2 cut(s)	288, 603
BseMII	CTCAG	2 cut(s)	20, 944
BseNI	ACTGG	1 cut(s)	687
BseRI	GAGGAG	2 cut(s)	174, 200
BseSI	GKGCMC	2 cut(s)	442, 727
BseXI	GCAGC	1 cut(s)	514
Bsh1236I	CGCG	1 cut(s)	342
BshFI	GGCC	2 cut(s)	565, 725
BshNI	GGYRCC	1 cut(s)	461
BshVI	ATCGAT	1 cut(s)	74
BsiHKAI	GWGCWC	1 cut(s)	959
BsiHKCI	CYCGRG	2 cut(s)	441, 958
BsiWI	CGTACG	2 cut(s)	219, 343
BslI	CCNNNNNNNGG	2 cut(s)	288, 603
BsmAI	GTCTC	3 cut(s)	308, 587, 777
BsmI	GAATGC	1 cut(s)	257
BsnI	GGCC	2 cut(s)	565, 725
Bso31I	GGTCTC	1 cut(s)	587
BsoBI	CYCGRG	2 cut(s)	441, 958
Bsp119I	TTCGAA	1 cut(s)	609
Bsp120I	GGGCCC	1 cut(s)	723
Bsp1286I	GDGCHC	4 cut(s)	54, 442, 727, 959
Bsp143I	GATC	7 cut(s)	167, 238, 308, 378, 634, 876, 937
Bsp19I	CCATGG	1 cut(s)	197
BspACI	CCGC	2 cut(s)	141, 403
BspANI	GGCC	2 cut(s)	565, 725
BspCNI	CTCAG	2 cut(s)	19, 945
BspDI	ATCGAT	1 cut(s)	74
BspFNI	CGCG	1 cut(s)	342
BspLI	GGNNCC	4 cut(s)	53, 463, 584, 725
BspMAI	CTGCAG	1 cut(s)	36
BspPI	GGATC	1 cut(s)	246
BspT104I	TTCGAA	1 cut(s)	609
BspT107I	GGYRCC	1 cut(s)	461
BspTNI	GGTCTC	1 cut(s)	587
BsrI	ACTGG	1 cut(s)	687
BssECI	CCNNGG	5 cut(s)	197, 816, 931, 1086, 1139
BssMI	GATC	7 cut(s)	167, 238, 308, 378, 634, 876, 937
BssT1I	CCWWGG	4 cut(s)	197, 816, 931, 1086
Bst4CI	ACNGT	4 cut(s)	348, 484, 679, 890
Bst6I	CTCTTC	1 cut(s)	496
BstAPI	GCANNNNNTGC	1 cut(s)	31
BstBI	TTCGAA	1 cut(s)	609
BstC8I	GCNNGC	2 cut(s)	32, 138
BstDEI	CTNAG	5 cut(s)	6, 232, 287, 659, 953
BstDSI	CCRYGG	2 cut(s)	197, 1139
BstF5I	GGATG	4 cut(s)	741, 753, 812, 1135
BstFNI	CGCG	1 cut(s)	342
BstHHI	GCGC	1 cut(s)	791
BstKTI	GATC	7 cut(s)	170, 241, 311, 381, 637, 879, 940
BstMAI	GTCTC	3 cut(s)	308, 587, 777
BstMBI	GATC	7 cut(s)	167, 238, 308, 378, 634, 876, 937
BstMWI	GCNNNNNNNGC	2 cut(s)	31, 963
BstSFI	CTRYAG	2 cut(s)	32, 483
BstSLI	GKGCMC	2 cut(s)	442, 727
BstUI	CGCG	1 cut(s)	342
BstV1I	GCAGC	1 cut(s)	514
BstX2I	RGATCY	1 cut(s)	167
BstXI	CCANNNNNNTGG	2 cut(s)	992, 1140
BstYI	RGATCY	1 cut(s)	167
Bsu15I	ATCGAT	1 cut(s)	74
Bsu36I	CCTNAGG	1 cut(s)	232
BsuRI	GGCC	2 cut(s)	565, 725
BsuTUI	ATCGAT	1 cut(s)	74
BtgI	CCRYGG	2 cut(s)	197, 1139
BtsCI	GGATG	4 cut(s)	741, 753, 812, 1135
BtsIMutI	CAGTG	1 cut(s)	675
Cac8I	GCNNGC	2 cut(s)	32, 138
CaiI	CAGNNNCTG	1 cut(s)	31
CfoI	GCGC	1 cut(s)	791
Cfr13I	GGNCC	3 cut(s)	582, 723, 724
ClaI	ATCGAT	1 cut(s)	74
Csp6I	GTAC	5 cut(s)	220, 344, 462, 673, 680
CviAII	CATG	3 cut(s)	198, 579, 598
CviQI	GTAC	5 cut(s)	220, 344, 462, 673, 680
DdeI	CTNAG	5 cut(s)	6, 232, 287, 659, 953
DpnI	GATC	7 cut(s)	169, 240, 310, 380, 636, 878, 939
DpnII	GATC	7 cut(s)	167, 238, 308, 378, 634, 876, 937
Eam1104I	CTCTTC	1 cut(s)	496
EarI	CTCTTC	1 cut(s)	496
Ecl136II	GAGCTC	1 cut(s)	957
Eco130I	CCWWGG	4 cut(s)	197, 816, 931, 1086
Eco24I	GRGCYC	3 cut(s)	54, 727, 959
Eco31I	GGTCTC	1 cut(s)	587
Eco32I	GATATC	1 cut(s)	64
Eco47I	GGWCC	1 cut(s)	582
Eco53kI	GAGCTC	1 cut(s)	957
Eco81I	CCTNAGG	1 cut(s)	232
Eco88I	CYCGRG	2 cut(s)	441, 958
EcoICRI	GAGCTC	1 cut(s)	957
EcoO109I	RGGNCCY	1 cut(s)	723
EcoRV	GATATC	1 cut(s)	64
EcoT14I	CCWWGG	4 cut(s)	197, 816, 931, 1086
EcoT22I	ATGCAT	2 cut(s)	259, 577
EcoT38I	GRGCYC	3 cut(s)	54, 727, 959
ErhI	CCWWGG	4 cut(s)	197, 816, 931, 1086
FaeI	CATG	3 cut(s)	201, 582, 601
FatI	CATG	3 cut(s)	197, 578, 597
FbaI	TGATCA	1 cut(s)	634
FblI	GTMKAC	1 cut(s)	1115
Fnu4HI	GCNGC	3 cut(s)	141, 403, 528
FokI	GGATG	4 cut(s)	728, 740, 799, 1122
FriOI	GRGCYC	3 cut(s)	54, 727, 959
Fsp4HI	GCNGC	3 cut(s)	141, 403, 528
FspBI	CTAG	3 cut(s)	653, 720, 797
GlaI	GCGC	1 cut(s)	790
GluI	GCNGC	3 cut(s)	141, 403, 528
GsuI	CTGGAG	1 cut(s)	723
HaeIII	GGCC	2 cut(s)	565, 725
HhaI	GCGC	1 cut(s)	791
Hin1II	CATG	3 cut(s)	201, 582, 601
Hin6I	GCGC	1 cut(s)	789
HinP1I	GCGC	1 cut(s)	789
HincII	GTYRAC	2 cut(s)	395, 1116
HindII	GTYRAC	2 cut(s)	395, 1116
HinfI	GANTC	8 cut(s)	215, 245, 292, 368, 444, 664, 806, 1117
HphI	GGTGA	2 cut(s)	486, 947
Hpy166II	GTNNAC	4 cut(s)	395, 675, 1116, 1128
Hpy188I	TCNGA	7 cut(s)	9, 100, 308, 313, 639, 954, 1070
Hpy188III	TCNNGA	6 cut(s)	242, 251, 653, 702, 880, 960
Hpy8I	GTNNAC	4 cut(s)	395, 675, 1116, 1128
HpyAV	CCTTC	7 cut(s)	138, 189, 293, 893, 913, 1025, 1065
HpyCH4III	ACNGT	4 cut(s)	348, 484, 679, 890
HpyCH4V	TGCA	7 cut(s)	34, 70, 257, 575, 601, 840, 1005
HpyF10VI	GCNNNNNNNGC	2 cut(s)	31, 963
HpyF3I	CTNAG	5 cut(s)	6, 232, 287, 659, 953
Hsp92II	CATG	3 cut(s)	201, 582, 601
HspAI	GCGC	1 cut(s)	789
KpnI	GGTACC	1 cut(s)	465
Ksp22I	TGATCA	1 cut(s)	634
Kzo9I	GATC	7 cut(s)	167, 238, 308, 378, 634, 876, 937
LmnI	GCTCC	4 cut(s)	57, 213, 456, 1062
Lsp1109I	GCAGC	1 cut(s)	514
LweI	GCATC	6 cut(s)	244, 562, 584, 750, 1014, 1074
MaeI	CTAG	3 cut(s)	653, 720, 797
MaeIII	GTNAC	5 cut(s)	42, 382, 407, 715, 922
MalI	GATC	7 cut(s)	169, 240, 310, 380, 636, 878, 939
MboI	GATC	7 cut(s)	167, 238, 308, 378, 634, 876, 937
MboII	GAAGA	3 cut(s)	31, 312, 483
MfeI	CAATTG	1 cut(s)	733
MflI	RGATCY	1 cut(s)	167
MhlI	GDGCHC	4 cut(s)	54, 442, 727, 959
MluCI	AATT	6 cut(s)	630, 641, 687, 733, 1022, 1078
MluI	ACGCGT	1 cut(s)	340
MlyI	GAGTC	5 cut(s)	209, 301, 377, 453, 1111
MmeI	TCCRAC	1 cut(s)	320
MnlI	CCTC	7 cut(s)	30, 146, 195, 221, 499, 596, 876
Mph1103I	ATGCAT	2 cut(s)	259, 577
MseI	TTAA	2 cut(s)	423, 1077
MslI	CAYNNNNRTG	1 cut(s)	1138
MspA1I	CMGCKG	1 cut(s)	143
MunI	CAATTG	1 cut(s)	733
Mva1269I	GAATGC	1 cut(s)	257
MvnI	CGCG	1 cut(s)	342
MwoI	GCNNNNNNNGC	2 cut(s)	31, 963
NcoI	CCATGG	1 cut(s)	197
NdeII	GATC	7 cut(s)	167, 238, 308, 378, 634, 876, 937
NlaIII	CATG	3 cut(s)	201, 582, 601
NlaIV	GGNNCC	4 cut(s)	53, 463, 584, 725
NmeAIII	GCCGAG	1 cut(s)	1076
NmuCI	GTSAC	2 cut(s)	42, 715
NsiI	ATGCAT	2 cut(s)	259, 577
NspV	TTCGAA	1 cut(s)	609
OliI	CACNNNNGTG	1 cut(s)	1138
PaeR7I	CTCGAG	1 cut(s)	958
PctI	GAATGC	1 cut(s)	257
PfeI	GAWTC	3 cut(s)	245, 664, 806
Pfl23II	CGTACG	2 cut(s)	219, 343
PflFI	GACNNNGTC	1 cut(s)	713
PkrI	GCNGC	3 cut(s)	142, 404, 529
PleI	GAGTC	5 cut(s)	209, 300, 376, 452, 1111
PpsI	GAGTC	5 cut(s)	209, 300, 376, 452, 1111
Psp124BI	GAGCTC	1 cut(s)	959
PspLI	CGTACG	2 cut(s)	219, 343
PspN4I	GGNNCC	4 cut(s)	53, 463, 584, 725
PspOMI	GGGCCC	1 cut(s)	723
PspPI	GGNCC	3 cut(s)	582, 723, 724
PstI	CTGCAG	1 cut(s)	36
PstNI	CAGNNNCTG	1 cut(s)	31
PsuI	RGATCY	1 cut(s)	167
PsyI	GACNNNGTC	1 cut(s)	713
RsaI	GTAC	5 cut(s)	221, 345, 463, 674, 681
RsaNI	GTAC	5 cut(s)	220, 344, 462, 673, 680
RseI	CAYNNNNRTG	1 cut(s)	1138
SacI	GAGCTC	1 cut(s)	959
SalI	GTCGAC	1 cut(s)	1114
SaqAI	TTAA	2 cut(s)	423, 1077
SatI	GCNGC	3 cut(s)	141, 403, 528
Sau3AI	GATC	7 cut(s)	167, 238, 308, 378, 634, 876, 937
Sau96I	GGNCC	3 cut(s)	582, 723, 724
SchI	GAGTC	5 cut(s)	209, 301, 377, 453, 1111
SduI	GDGCHC	4 cut(s)	54, 442, 727, 959
SfaNI	GCATC	6 cut(s)	244, 562, 584, 750, 1014, 1074
SfcI	CTRYAG	2 cut(s)	32, 483
Sfr274I	CTCGAG	1 cut(s)	958
SfuI	TTCGAA	1 cut(s)	609
SinI	GGWCC	1 cut(s)	582
SlaI	CTCGAG	1 cut(s)	958
SmiMI	CAYNNNNRTG	1 cut(s)	1138
SmlI	CTYRAG	2 cut(s)	590, 958
SmoI	CTYRAG	2 cut(s)	590, 958
Sse9I	AATT	6 cut(s)	630, 641, 687, 733, 1022, 1078
SsiI	CCGC	2 cut(s)	141, 403
SspI	AATATT	1 cut(s)	945
SspMI	CTAG	3 cut(s)	653, 720, 797
SstI	GAGCTC	1 cut(s)	959
StyI	CCWWGG	4 cut(s)	197, 816, 931, 1086
TaaI	ACNGT	4 cut(s)	348, 484, 679, 890
TaqI	TCGA	9 cut(s)	74, 213, 252, 267, 609, 848, 940, 959, 1115
TasI	AATT	6 cut(s)	630, 641, 687, 733, 1022, 1078
TatI	WGTACW	1 cut(s)	679
TauI	GCSGC	2 cut(s)	143, 405
TfiI	GAWTC	3 cut(s)	245, 664, 806
Tru1I	TTAA	2 cut(s)	423, 1077
Tru9I	TTAA	2 cut(s)	423, 1077
TscAI	CASTG	1 cut(s)	682
TseFI	GTSAC	2 cut(s)	42, 715
TseI	GCWGC	1 cut(s)	527
Tsp45I	GTSAC	2 cut(s)	42, 715
TspGWI	ACGGA	2 cut(s)	1070, 1128
TspRI	CASTG	1 cut(s)	682
Tth111I	GACNNNGTC	1 cut(s)	713
VpaK11BI	GGWCC	1 cut(s)	582
XbaI	TCTAGA	1 cut(s)	652
XhoI	CTCGAG	1 cut(s)	958
XmiI	GTMKAC	1 cut(s)	1115
XspI	CTAG	3 cut(s)	653, 720, 797
Zsp2I	ATGCAT	2 cut(s)	259, 577

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.