Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005609.1

Orthogroup ID

OG0000142

Physical Location & Seq

Genomic Coordinates Forward (+)

10348 .. 11700

Gene Structure 1353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005609.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

atgtggaaaaaagcaaaactttattcttctgcttggtggaaaagacaacagtgttcatcttccgaagaagaggaggtgcgcgtgagcagtaaatggtctgaacagctcccgctgcaaattacgcaagtgattctacaaaagttatgcctatctgattacattaggtgtggtgcagtatgcccttcttggcgatcagcagctgttgatatggcaatggcgcgaataccttttcgtctcgctcctcaacttccatggctcatgctcgccactacttattgtgactcatcaacatctgccatagatcatcattttttgagtcttagtgaggaccataaactctacaaaacaaaccccacttatggtatgcataggcaattgtgtgttgggtcaattgaggggtggttgatcatgctcgacaatgtcacctttactgttgatcaagatcatactacctttaacatgttcaacttgttcttcttgaacccaatatcaggtgccaaagtcatgttaccaccagaatccaccattccacccaaactcagcaagatccgttcctggttgcataaagtagtagcctcttcggtaccgacaagcccgcactgtcttgtggctagtcatcattcaactggacgtttggctttctgtagaccttcagataaatcatggaccgtgattgatgctgatggggaggttcttacggggcttgaagaagagtttttcgatattgaaataattgacaagaaattatatgttttagttatgagtgaactgggctttttattcgtgtttgacatccacttagattccagtgctcatacctatacggctgaaaggttggttatgcttcatccttggccagttatttcccttcctacgcctgtggtacgggatggagtcatacatgcaaatggatgtgaacacgtgacttacatattcaaagattctacctcaaaagagttgtttatgactttcattagtaagagttattcttacaaggatggtgaggagttcaggctatccgtcgatgatcctcatacagatggatttcgagtattcaaactagaacacaataatggtcctcgatggatagaaactaccaatcttggtaatcgtatactgttcctgagcacggccagcagattattggtcccttctgtcatagaccttaattattttggtccttatggaaagacacaagaaagaaatcgcatttattttgtttttgaaggtgggcatgattttggtatattttccttgacagacaaaagcatcgaacgtcacacattcccttttcccgaagatcattattctactagacggtctcctatttggttcacaccaaatctttggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030684 GO:0030686 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904 GO:2000232

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT_2 Pescadillo_N

Protein Analysis

450

Amino Acids

51.71

Weight (kDa)

6.34

Isoelectric Point (pI)

48.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000142)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica	MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica	Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis	pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis	RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata	RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora	Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa	Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha	Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana	Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	583
AccB1I	GGYRCC	2 cut(s)	494, 583
AccI	GTMKAC	2 cut(s)	646, 1114
AccII	CGCG	2 cut(s)	81, 220
AciI	CCGC	2 cut(s)	110, 596
AclWI	GGATC	2 cut(s)	541, 1022
AcoI	YGGCCR	2 cut(s)	854, 1131
AcuI	CTGAAG	1 cut(s)	636
AcvI	CACGTG	1 cut(s)	922
AfaI	GTAC	2 cut(s)	585, 885
AfiI	CCNNNNNNNGG	3 cut(s)	359, 491, 1129
AflIII	ACRYGT	2 cut(s)	459, 919
AgsI	TTSAA	8 cut(s)	466, 481, 624, 707, 728, 937, 1057, 1226
AjnI	CCWGG	1 cut(s)	554
AluBI	AGCT	2 cut(s)	106, 200
AluI	AGCT	2 cut(s)	106, 200
Alw21I	GWGCWC	2 cut(s)	814, 1130
Alw26I	GTCTC	2 cut(s)	239, 1326
AlwI	GGATC	2 cut(s)	541, 1022
AlwNI	CAGNNNCTG	1 cut(s)	200
AoxI	GGCC	2 cut(s)	854, 1131
ApeKI	GCWGC	2 cut(s)	112, 197
Asp718I	GGTACC	1 cut(s)	583
AspLEI	GCGC	2 cut(s)	81, 220
AspS9I	GGNCC	5 cut(s)	328, 666, 1076, 1147, 1178
AsuHPI	GGTGA	2 cut(s)	415, 1013
AvaII	GGWCC	5 cut(s)	328, 666, 1076, 1147, 1178
BalI	TGGCCA	1 cut(s)	856
BanI	GGYRCC	2 cut(s)	494, 583
BbrPI	CACGTG	1 cut(s)	922
Bbv12I	GWGCWC	2 cut(s)	814, 1130
BbvI	GCAGC	2 cut(s)	99, 209
BccI	CCATC	5 cut(s)	677, 884, 992, 1034, 1077
BceAI	ACGGC	2 cut(s)	840, 1146
BciT130I	CCWGG	1 cut(s)	556
BclI	TGATCA	2 cut(s)	405, 436
BcoDI	GTCTC	2 cut(s)	239, 1326
BfaI	CTAG	3 cut(s)	612, 1061, 1314
BfmI	CTRYAG	1 cut(s)	643
BisI	GCNGC	2 cut(s)	113, 198
BlsI	GCNGC	2 cut(s)	114, 199
Bme1390I	CCNGG	1 cut(s)	556
Bme18I	GGWCC	5 cut(s)	328, 666, 1076, 1147, 1178
BmgT120I	GGNCC	5 cut(s)	328, 666, 1076, 1147, 1178
BmiI	GGNNCC	3 cut(s)	496, 585, 1149
BmrFI	CCNGG	1 cut(s)	556
BmrI	ACTGGG	1 cut(s)	779
BmsI	GCATC	2 cut(s)	667, 1278
BmuI	ACTGGG	1 cut(s)	779
Bpu10I	CCTNAGC	1 cut(s)	1124
BsaAI	YACGTR	1 cut(s)	922
BsaBI	GATNNNNATC	1 cut(s)	441
BsaI	GGTCTC	1 cut(s)	1326
BsaJI	CCNNGG	2 cut(s)	251, 851
Bsc4I	CCNNNNNNNGG	3 cut(s)	359, 491, 1129
Bse1I	ACTGG	4 cut(s)	631, 774, 807, 857
Bse3DI	GCAATG	1 cut(s)	219
Bse8I	GATNNNNATC	1 cut(s)	441
BseBI	CCWGG	1 cut(s)	556
BseDI	CCNNGG	2 cut(s)	251, 851
BseGI	GGATG	5 cut(s)	792, 847, 895, 917, 1003
BseJI	GATNNNNATC	1 cut(s)	441
BseLI	CCNNNNNNNGG	3 cut(s)	359, 491, 1129
BseMI	GCAATG	1 cut(s)	219
BseMII	CTCAG	2 cut(s)	553, 1115
BseNI	ACTGG	4 cut(s)	631, 774, 807, 857
BseRI	GAGGAG	3 cut(s)	86, 231, 1019
BseXI	GCAGC	2 cut(s)	99, 209
BsgI	GTGCAG	1 cut(s)	192
Bsh1236I	CGCG	2 cut(s)	81, 220
BshFI	GGCC	2 cut(s)	856, 1133
BshNI	GGYRCC	2 cut(s)	494, 583
BsiHKAI	GWGCWC	2 cut(s)	814, 1130
BslFI	GGGAC	1 cut(s)	1133
BslI	CCNNNNNNNGG	3 cut(s)	359, 491, 1129
BsmAI	GTCTC	2 cut(s)	239, 1326
BsmBI	CGTCTC	1 cut(s)	239
BsmFI	GGGAC	1 cut(s)	1133
BsnI	GGCC	2 cut(s)	856, 1133
Bso31I	GGTCTC	1 cut(s)	1326
Bsp1286I	GDGCHC	2 cut(s)	814, 1130
Bsp143I	GATC	8 cut(s)	191, 301, 405, 436, 442, 546, 1027, 1300
Bsp19I	CCATGG	1 cut(s)	251
BspACI	CCGC	2 cut(s)	110, 596
BspANI	GGCC	2 cut(s)	856, 1133
BspCNI	CTCAG	2 cut(s)	552, 1116
BspFNI	CGCG	2 cut(s)	81, 220
BspLI	GGNNCC	3 cut(s)	496, 585, 1149
BspPI	GGATC	2 cut(s)	541, 1022
BspT107I	GGYRCC	2 cut(s)	494, 583
BspTNI	GGTCTC	1 cut(s)	1326
BsrDI	GCAATG	1 cut(s)	219
BsrI	ACTGG	4 cut(s)	631, 774, 807, 857
BssECI	CCNNGG	2 cut(s)	251, 851
BssMI	GATC	8 cut(s)	191, 301, 405, 436, 442, 546, 1027, 1300
BssNAI	GTATAC	1 cut(s)	1115
BssT1I	CCWWGG	2 cut(s)	251, 851
Bst1107I	GTATAC	1 cut(s)	1115
Bst2UI	CCWGG	1 cut(s)	556
Bst4CI	ACNGT	6 cut(s)	51, 433, 602, 670, 1119, 1320
Bst6I	CTCTTC	3 cut(s)	63, 583, 705
BstBAI	YACGTR	1 cut(s)	922
BstC8I	GCNNGC	3 cut(s)	264, 596, 1135
BstDEI	CTNAG	4 cut(s)	320, 539, 799, 1124
BstDSI	CCRYGG	1 cut(s)	251
BstF5I	GGATG	5 cut(s)	792, 847, 895, 917, 1003
BstFNI	CGCG	2 cut(s)	81, 220
BstHHI	GCGC	2 cut(s)	81, 220
BstKTI	GATC	8 cut(s)	194, 304, 408, 439, 445, 549, 1030, 1303
BstMAI	GTCTC	2 cut(s)	239, 1326
BstMBI	GATC	8 cut(s)	191, 301, 405, 436, 442, 546, 1027, 1300
BstMWI	GCNNNNNNNGC	3 cut(s)	112, 121, 1134
BstNI	CCWGG	1 cut(s)	556
BstNSI	RCATGY	2 cut(s)	463, 905
BstSCI	CCNGG	1 cut(s)	554
BstSFI	CTRYAG	1 cut(s)	643
BstUI	CGCG	2 cut(s)	81, 220
BstV1I	GCAGC	2 cut(s)	99, 209
BstX2I	RGATCY	1 cut(s)	546
BstXI	CCANNNNNNTGG	1 cut(s)	1347
BstYI	RGATCY	1 cut(s)	546
BstZ17I	GTATAC	1 cut(s)	1115
BsuRI	GGCC	2 cut(s)	856, 1133
BtgI	CCRYGG	1 cut(s)	251
BtsCI	GGATG	5 cut(s)	792, 847, 895, 917, 1003
BtsIMutI	CAGTG	3 cut(s)	56, 598, 814
Cac8I	GCNNGC	3 cut(s)	264, 596, 1135
CaiI	CAGNNNCTG	1 cut(s)	200
CfoI	GCGC	2 cut(s)	81, 220
Cfr13I	GGNCC	5 cut(s)	328, 666, 1076, 1147, 1178
Csp6I	GTAC	2 cut(s)	584, 884
CviAII	CATG	8 cut(s)	252, 259, 409, 460, 505, 663, 902, 1235
CviQI	GTAC	2 cut(s)	584, 884
DdeI	CTNAG	4 cut(s)	320, 539, 799, 1124
DpnI	GATC	8 cut(s)	193, 303, 407, 438, 444, 548, 1029, 1302
DpnII	GATC	8 cut(s)	191, 301, 405, 436, 442, 546, 1027, 1300
EaeI	YGGCCR	2 cut(s)	854, 1131
Eam1104I	CTCTTC	3 cut(s)	63, 583, 705
EarI	CTCTTC	3 cut(s)	63, 583, 705
Eco130I	CCWWGG	2 cut(s)	251, 851
Eco31I	GGTCTC	1 cut(s)	1326
Eco47I	GGWCC	5 cut(s)	328, 666, 1076, 1147, 1178
Eco57I	CTGAAG	1 cut(s)	636
Eco72I	CACGTG	1 cut(s)	922
EcoRII	CCWGG	1 cut(s)	554
EcoT14I	CCWWGG	2 cut(s)	251, 851
EcoT22I	ATGCAT	1 cut(s)	369
ErhI	CCWWGG	2 cut(s)	251, 851
Esp3I	CGTCTC	1 cut(s)	239
FaeI	CATG	8 cut(s)	255, 262, 412, 463, 508, 666, 905, 1238
FalI	AAGNNNNNCTT	1 cut(s)	35
FaqI	GGGAC	1 cut(s)	1133
FatI	CATG	8 cut(s)	251, 258, 408, 459, 504, 662, 901, 1234
FauI	CCCGC	2 cut(s)	117, 603
FbaI	TGATCA	2 cut(s)	405, 436
FblI	GTMKAC	2 cut(s)	646, 1114
Fnu4HI	GCNGC	2 cut(s)	113, 198
FokI	GGATG	5 cut(s)	779, 834, 902, 924, 1010
Fsp4HI	GCNGC	2 cut(s)	113, 198
FspBI	CTAG	3 cut(s)	612, 1061, 1314
GlaI	GCGC	2 cut(s)	80, 219
GluI	GCNGC	2 cut(s)	113, 198
HaeIII	GGCC	2 cut(s)	856, 1133
HhaI	GCGC	2 cut(s)	81, 220
Hin1II	CATG	8 cut(s)	255, 262, 412, 463, 508, 666, 905, 1238
Hin6I	GCGC	2 cut(s)	79, 218
HinP1I	GCGC	2 cut(s)	79, 218
HinfI	GANTC	7 cut(s)	130, 281, 316, 518, 803, 894, 941
HphI	GGTGA	2 cut(s)	415, 1013
Hpy166II	GTNNAC	5 cut(s)	647, 767, 917, 1115, 1335
Hpy188I	TCNGA	4 cut(s)	64, 100, 154, 655
Hpy188III	TCNNGA	4 cut(s)	440, 478, 1123, 1295
Hpy8I	GTNNAC	5 cut(s)	647, 767, 917, 1115, 1335
Hpy99I	CGWCG	1 cut(s)	1025
HpyAV	CCTTC	5 cut(s)	192, 660, 878, 1161, 1220
HpyCH4III	ACNGT	6 cut(s)	51, 433, 602, 670, 1119, 1320
HpyCH4IV	ACGT	3 cut(s)	631, 921, 1276
HpyCH4V	TGCA	5 cut(s)	115, 173, 367, 562, 905
HpyF10VI	GCNNNNNNNGC	3 cut(s)	112, 121, 1134
HpyF3I	CTNAG	4 cut(s)	320, 539, 799, 1124
HpySE526I	ACGT	3 cut(s)	631, 921, 1276
Hsp92II	CATG	8 cut(s)	255, 262, 412, 463, 508, 666, 905, 1238
HspAI	GCGC	2 cut(s)	79, 218
KpnI	GGTACC	1 cut(s)	587
Ksp22I	TGATCA	2 cut(s)	405, 436
Kzo9I	GATC	8 cut(s)	191, 301, 405, 436, 442, 546, 1027, 1300
LmnI	GCTCC	2 cut(s)	111, 244
Lsp1109I	GCAGC	2 cut(s)	99, 209
LweI	GCATC	2 cut(s)	667, 1278
MaeI	CTAG	3 cut(s)	612, 1061, 1314
MaeII	ACGT	3 cut(s)	631, 921, 1276
MaeIII	GTNAC	5 cut(s)	278, 421, 507, 922, 1277
MalI	GATC	8 cut(s)	193, 303, 407, 438, 444, 548, 1029, 1302
MboI	GATC	8 cut(s)	191, 301, 405, 436, 442, 546, 1027, 1300
MboII	GAAGA	9 cut(s)	18, 51, 77, 80, 466, 570, 719, 722, 1310
MfeI	CAATTG	2 cut(s)	374, 390
MflI	RGATCY	1 cut(s)	546
MhlI	GDGCHC	2 cut(s)	814, 1130
MlsI	TGGCCA	1 cut(s)	856
MluCI	AATT	6 cut(s)	117, 374, 390, 732, 743, 1168
MluNI	TGGCCA	1 cut(s)	856
MlyI	GAGTC	3 cut(s)	275, 325, 903
Mox20I	TGGCCA	1 cut(s)	856
Mph1103I	ATGCAT	1 cut(s)	369
MscI	TGGCCA	1 cut(s)	856
MseI	TTAA	2 cut(s)	456, 1167
MslI	CAYNNNNRTG	3 cut(s)	906, 1038, 1071
Msp20I	TGGCCA	1 cut(s)	856
MspA1I	CMGCKG	2 cut(s)	112, 200
MspR9I	CCNGG	1 cut(s)	556
MunI	CAATTG	2 cut(s)	374, 390
MvaI	CCWGG	1 cut(s)	556
MvnI	CGCG	2 cut(s)	81, 220
MwoI	GCNNNNNNNGC	3 cut(s)	112, 121, 1134
NcoI	CCATGG	1 cut(s)	251
NdeII	GATC	8 cut(s)	191, 301, 405, 436, 442, 546, 1027, 1300
NlaIII	CATG	8 cut(s)	255, 262, 412, 463, 508, 666, 905, 1238
NlaIV	GGNNCC	3 cut(s)	496, 585, 1149
NmuCI	GTSAC	4 cut(s)	278, 421, 922, 1277
NsiI	ATGCAT	1 cut(s)	369
NspI	RCATGY	2 cut(s)	463, 905
PciI	ACATGT	1 cut(s)	459
PfeI	GAWTC	4 cut(s)	130, 518, 803, 941
PflFI	GACNNNGTC	1 cut(s)	419
PkrI	GCNGC	2 cut(s)	114, 199
PleI	GAGTC	3 cut(s)	275, 324, 902
PmaCI	CACGTG	1 cut(s)	922
PmlI	CACGTG	1 cut(s)	922
PpsI	GAGTC	3 cut(s)	275, 324, 902
Ppu21I	YACGTR	1 cut(s)	922
PscI	ACATGT	1 cut(s)	459
Psp6I	CCWGG	1 cut(s)	554
PspCI	CACGTG	1 cut(s)	922
PspGI	CCWGG	1 cut(s)	554
PspN4I	GGNNCC	3 cut(s)	496, 585, 1149
PspPI	GGNCC	5 cut(s)	328, 666, 1076, 1147, 1178
PstNI	CAGNNNCTG	1 cut(s)	200
PsuI	RGATCY	1 cut(s)	546
PsyI	GACNNNGTC	1 cut(s)	419
PvuII	CAGCTG	1 cut(s)	200
RsaI	GTAC	2 cut(s)	585, 885
RsaNI	GTAC	2 cut(s)	584, 884
RseI	CAYNNNNRTG	3 cut(s)	906, 1038, 1071
SaqAI	TTAA	2 cut(s)	456, 1167
SatI	GCNGC	2 cut(s)	113, 198
Sau3AI	GATC	8 cut(s)	191, 301, 405, 436, 442, 546, 1027, 1300
Sau96I	GGNCC	5 cut(s)	328, 666, 1076, 1147, 1178
SchI	GAGTC	3 cut(s)	275, 325, 903
ScrFI	CCNGG	1 cut(s)	556
SduI	GDGCHC	2 cut(s)	814, 1130
SfaNI	GCATC	2 cut(s)	667, 1278
SfcI	CTRYAG	1 cut(s)	643
SinI	GGWCC	5 cut(s)	328, 666, 1076, 1147, 1178
SmiMI	CAYNNNNRTG	3 cut(s)	906, 1038, 1071
Sse9I	AATT	6 cut(s)	117, 374, 390, 732, 743, 1168
SsiI	CCGC	2 cut(s)	110, 596
SspMI	CTAG	3 cut(s)	612, 1061, 1314
StyD4I	CCNGG	1 cut(s)	554
StyI	CCWWGG	2 cut(s)	251, 851
TaaI	ACNGT	6 cut(s)	51, 433, 602, 670, 1119, 1320
TaiI	ACGT	3 cut(s)	634, 924, 1279
TaqI	TCGA	6 cut(s)	414, 720, 1023, 1048, 1081, 1272
TasI	AATT	6 cut(s)	117, 374, 390, 732, 743, 1168
TfiI	GAWTC	4 cut(s)	130, 518, 803, 941
Tru1I	TTAA	2 cut(s)	456, 1167
Tru9I	TTAA	2 cut(s)	456, 1167
TscAI	CASTG	3 cut(s)	56, 605, 814
TseFI	GTSAC	4 cut(s)	278, 421, 922, 1277
TseI	GCWGC	2 cut(s)	112, 197
Tsp45I	GTSAC	4 cut(s)	278, 421, 922, 1277
TspDTI	ATGAA	3 cut(s)	45, 836, 961
TspGWI	ACGGA	2 cut(s)	539, 1009
TspRI	CASTG	3 cut(s)	56, 605, 814
Tth111I	GACNNNGTC	1 cut(s)	419
VpaK11BI	GGWCC	5 cut(s)	328, 666, 1076, 1147, 1178
XceI	RCATGY	2 cut(s)	463, 905
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1141
XmiI	GTMKAC	2 cut(s)	646, 1114
XspI	CTAG	3 cut(s)	612, 1061, 1314
Zsp2I	ATGCAT	1 cut(s)	369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.