Rmu_sc0013571.1_g000002

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013571.1
Physical Location & Seq
Reverse (-)
17638 .. 21338
3701 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013571.1_g000002.1.cds

Sequence Viewer

Length: 1905 bp
atggaattggctagtccatcttttcgaaggtttctgggggatatatgcatagtctgcaaaattggattgatgttgttgctcaccatctttgttagaaggattcctgaggagaagaaaatcaaatgcgctctacttctcagaagaatttttgaagttctttttacacactaccgcttgtcaagaatgacgttatttcacattctaaattttattgaacgcaagctcactatttccattagaagggtgcgagagtacacacaaaaatgtcattctgaatgcgaagaagataccagcaggtggtccaatgaactcccagaagatatcatgcaaaatgttctacaacggttatgcctatcagatttctttcggtgccgtgcagtatgcttttcttggcaagccactgttgatatggcaattgccagcaagtcttgtcgtcctactcccgaatttccatggctcatgctctgttctcatcccttctccatcaaagataattgctttctaagtctaactgatgacaagaaatttatttgcaagtcagctcctacctataatatgaagaggggggattgtgttgggtcaattgatgggtggttgatcatggctgatagtgttttatggcgtcctgagagatttatgaaaccctggtcattttacttgtataatcatcataccagtacttttagtatcaacttcttctttttgaatccattatcaggtgttcgagtgaaccttccatcatcaaaatccacccttccatgtcactgcagcaatggacctggcttctgcattttaaaagtagctgcctcatcagtaccaacttgccaggactgttatgtcgttagcctttgcagaagtggtcatttggctttcagtaggcccaatgataattcatggactctcattgatcagggggaagctagagagtttattttttgtgatatagaaataatttatgggaaaatatatgctgcaactacggaggcatccaagtttttaatggtatttgatgtccattatggcaatggccctcctggctacagggctgaaaggttggtcatgcttgagcccagtccagttcctaacatgtttcttaatatttggagaacagatggagttgaatcccattcaaactgcgaactcatttccctagcaaaaaattctctatcagaggagttgtttatgatattctgcagtactacctttattctggaggaggatcaatctccttggcatgtgatctttggtagtgattttatccttccaccacagattcaagcatttcgagtgttcaagatggagtggaagattaatggtcctcagtggatagaggttcttgacctcggtgaccagatattatttgttatttcaactgaaagggttctggctccgatctggtctggattcgttctgaggtgggctgcctggtgttggggctggttctggagtgacatggctgtgctgcaatggaaggctttggcgcggcggctggttgctgcagggcggcgtgttggtggctatggggcttgccggcggcgtgtgtggttgtctgcagtgcttggcctttgcggggggttgggggttttgggccgggccactgttctcgtgccatctctatggctcggtctgttggccgtgccggctgtttatcaatgtgatgatgaattacccttgcacgtggtctggcggttttgggacacggtgcttgaaagggtgttacgattcatctttatattggtggcagggttgtatctttacactagagttcggctactacccatggtagcccgcatgtatgggcgaatttggtggttggaggttgggcttgtttggctcactgaggtcggacttgttggcagatccgccactatggttctagtttccagtatggtttccatcttttga

Protein Analysis

634

Amino Acids

72.97

Weight (kDa)

8.62

Isoelectric Point (pI)

50.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000142)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 285
AasI GACNNNNNNGTC 1 cut(s) 836
Acc36I ACCTGC 1 cut(s) 285
AccB1I GGYRCC 1 cut(s) 369
AccB7I CCANNNNNTGG 1 cut(s) 297
AccII CGCG 1 cut(s) 1483
AciI CCGC 9 cut(s) 172, 1483, 1486, 1504, 1534, 1569, 1687, 1789, 1863
AclWI GGATC 2 cut(s) 1227, 1854
AcoI YGGCCR 1 cut(s) 1632
AcsI RAATTY 6 cut(s) 144, 205, 446, 524, 1159, 1803
AcvI CACGTG 1 cut(s) 1678
AcyI GRCGYC 1 cut(s) 622
AfaI GTAC 4 cut(s) 254, 679, 816, 1198
AfiI CCNNNNNNNGG 5 cut(s) 240, 297, 716, 1431, 1570
AflIII ACRYGT 1 cut(s) 1086
AgsI TTSAA 9 cut(s) 152, 215, 706, 1121, 1131, 1277, 1294, 1371, 1709
AjnI CCWGG 5 cut(s) 644, 778, 825, 1033, 1424
AluBI AGCT 4 cut(s) 223, 542, 803, 920
AluI AGCT 4 cut(s) 223, 542, 803, 920
AlwI GGATC 2 cut(s) 1227, 1854
AoxI GGCC 6 cut(s) 878, 1027, 1561, 1588, 1593, 1632
ApeKI GCWGC 6 cut(s) 768, 803, 971, 1421, 1462, 1496
ApoI RAATTY 6 cut(s) 144, 205, 446, 524, 1159, 1803
AseI ATTAAT 1 cut(s) 1311
Asp700I GAANNNNTTC 1 cut(s) 1380
AspLEI GCGC 2 cut(s) 128, 1483
AspS9I GGNCC 7 cut(s) 300, 776, 879, 1028, 1316, 1588, 1593
AsuC2I CCSGG 1 cut(s) 1592
AsuHPI GGTGA 2 cut(s) 73, 1358
AsuII TTCGAA 1 cut(s) 25
AvaII GGWCC 3 cut(s) 300, 776, 1316
AxyI CCTNAGG 1 cut(s) 105
BanI GGYRCC 1 cut(s) 369
BanII GRGCYC 1 cut(s) 1071
BauI CACGAG 1 cut(s) 1604
BbrPI CACGTG 1 cut(s) 1678
BbvI GCAGC 6 cut(s) 780, 790, 958, 1408, 1449, 1483
BccI CCATC 9 cut(s) 25, 92, 491, 581, 745, 1106, 1291, 1618, 1904
BceAI ACGGC 2 cut(s) 357, 1619
BciT130I CCWGG 5 cut(s) 646, 780, 827, 1035, 1426
BclI TGATCA 2 cut(s) 597, 907
BcnI CCSGG 1 cut(s) 1592
BfaI CTAG 5 cut(s) 12, 921, 1151, 1761, 1877
BfmI CTRYAG 5 cut(s) 766, 1039, 1192, 1497, 1551
BfuAI ACCTGC 1 cut(s) 285
BglI GCCNNNNNGGC 2 cut(s) 1035, 1640
BmcAI AGTACT 2 cut(s) 679, 1198
Bme1390I CCNGG 6 cut(s) 646, 780, 827, 1035, 1426, 1592
Bme18I GGWCC 3 cut(s) 300, 776, 1316
BmgT120I GGNCC 7 cut(s) 300, 776, 879, 1028, 1316, 1588, 1593
BmiI GGNNCC 2 cut(s) 371, 1389
BmrFI CCNGG 6 cut(s) 646, 780, 827, 1035, 1426, 1592
BmrI ACTGGG 1 cut(s) 1065
BmsI GCATC 1 cut(s) 995
BmuI ACTGGG 1 cut(s) 1065
BpmI CTGGAG 2 cut(s) 1232, 1465
Bpu14I TTCGAA 1 cut(s) 25
BpuEI CTTGAG 1 cut(s) 1085
BpuMI CCSGG 1 cut(s) 1592
BsaAI YACGTR 1 cut(s) 1678
BsaHI GRCGYC 1 cut(s) 622
BsaJI CCNNGG 5 cut(s) 452, 644, 1229, 1342, 1779
Bsc4I CCNNNNNNNGG 5 cut(s) 240, 297, 716, 1431, 1570
Bse118I RCCGGY 2 cut(s) 1530, 1639
Bse1I ACTGG 4 cut(s) 675, 1071, 1076, 1884
Bse21I CCTNAGG 1 cut(s) 105
Bse3DI GCAATG 3 cut(s) 778, 1030, 1472
BseBI CCWGG 5 cut(s) 646, 780, 827, 1035, 1426
BseDI CCNNGG 5 cut(s) 452, 644, 1229, 1342, 1779
BseGI GGATG 2 cut(s) 472, 986
BseLI CCNNNNNNNGG 5 cut(s) 240, 297, 716, 1431, 1570
BseMI GCAATG 3 cut(s) 778, 1030, 1472
BseMII CTCAG 6 cut(s) 96, 151, 618, 1334, 1403, 1830
BseNI ACTGG 4 cut(s) 675, 1071, 1076, 1884
BseRI GAGGAG 3 cut(s) 122, 1187, 1229
BseXI GCAGC 6 cut(s) 780, 790, 958, 1408, 1449, 1483
BsgI GTGCAG 1 cut(s) 396
Bsh1236I CGCG 1 cut(s) 1483
BshFI GGCC 6 cut(s) 880, 1029, 1563, 1590, 1595, 1634
BshNI GGYRCC 1 cut(s) 369
BsiSI CCGG 3 cut(s) 1531, 1591, 1640
BslFI GGGAC 1 cut(s) 1709
BslI CCNNNNNNNGG 5 cut(s) 240, 297, 716, 1431, 1570
BsmFI GGGAC 1 cut(s) 1709
BsmI GAATGC 1 cut(s) 281
BsnI GGCC 6 cut(s) 880, 1029, 1563, 1590, 1595, 1634
Bsp119I TTCGAA 1 cut(s) 25
Bsp1286I GDGCHC 1 cut(s) 1071
Bsp143I GATC 6 cut(s) 597, 907, 1219, 1239, 1392, 1859
Bsp19I CCATGG 2 cut(s) 452, 1779
BspACI CCGC 9 cut(s) 172, 1483, 1486, 1504, 1534, 1569, 1687, 1789, 1863
BspANI GGCC 6 cut(s) 880, 1029, 1563, 1590, 1595, 1634
BspCNI CTCAG 6 cut(s) 97, 150, 619, 1333, 1404, 1831
BspFNI CGCG 1 cut(s) 1483
BspLI GGNNCC 2 cut(s) 371, 1389
BspMAI CTGCAG 4 cut(s) 770, 1196, 1501, 1555
BspMI ACCTGC 1 cut(s) 285
BspPI GGATC 2 cut(s) 1227, 1854
BspT104I TTCGAA 1 cut(s) 25
BspT107I GGYRCC 1 cut(s) 369
BsrDI GCAATG 3 cut(s) 778, 1030, 1472
BsrFI RCCGGY 2 cut(s) 1530, 1639
BsrI ACTGG 4 cut(s) 675, 1071, 1076, 1884
BssAI RCCGGY 2 cut(s) 1530, 1639
BssECI CCNNGG 5 cut(s) 452, 644, 1229, 1342, 1779
BssMI GATC 6 cut(s) 597, 907, 1219, 1239, 1392, 1859
BssNI GRCGYC 1 cut(s) 622
BssSI CACGAG 1 cut(s) 1604
BssT1I CCWWGG 3 cut(s) 452, 1229, 1779
Bst2BI CACGAG 1 cut(s) 1604
Bst2UI CCWGG 5 cut(s) 646, 780, 827, 1035, 1426
Bst4CI ACNGT 5 cut(s) 345, 403, 833, 1600, 1702
Bst6I CTCTTC 1 cut(s) 554
BstACI GRCGYC 1 cut(s) 622
BstAPI GCANNNNNTGC 1 cut(s) 54
BstBAI YACGTR 1 cut(s) 1678
BstBI TTCGAA 1 cut(s) 25
BstC8I GCNNGC 7 cut(s) 221, 396, 421, 1528, 1532, 1641, 1789
BstDEI CTNAG 7 cut(s) 105, 137, 503, 627, 1320, 1412, 1839
BstDSI CCRYGG 2 cut(s) 452, 1779
BstEII GGTNACC 1 cut(s) 1346
BstF5I GGATG 2 cut(s) 472, 986
BstFNI CGCG 1 cut(s) 1483
BstHHI GCGC 2 cut(s) 128, 1483
BstKTI GATC 6 cut(s) 600, 910, 1222, 1242, 1395, 1862
BstMBI GATC 6 cut(s) 597, 907, 1219, 1239, 1392, 1859
BstMWI GCNNNNNNNGC 4 cut(s) 54, 1035, 1640, 1831
BstNI CCWGG 5 cut(s) 646, 780, 827, 1035, 1426
BstNSI RCATGY 3 cut(s) 1090, 1238, 1795
BstPI GGTNACC 1 cut(s) 1346
BstSCI CCNGG 6 cut(s) 644, 778, 825, 1033, 1424, 1590
BstSFI CTRYAG 5 cut(s) 766, 1039, 1192, 1497, 1551
BstUI CGCG 1 cut(s) 1483
BstV1I GCAGC 6 cut(s) 780, 790, 958, 1408, 1449, 1483
BstX2I RGATCY 1 cut(s) 1859
BstXI CCANNNNNNTGG 1 cut(s) 1617
BstYI RGATCY 1 cut(s) 1859
Bsu36I CCTNAGG 1 cut(s) 105
BsuRI GGCC 6 cut(s) 880, 1029, 1563, 1590, 1595, 1634
BtgI CCRYGG 2 cut(s) 452, 1779
BtsCI GGATG 2 cut(s) 472, 986
BtsI GCAGTG 2 cut(s) 763, 1560
BtsIMutI CAGTG 6 cut(s) 399, 763, 1328, 1560, 1596, 1836
BveI ACCTGC 1 cut(s) 285
Cac8I GCNNGC 7 cut(s) 221, 396, 421, 1528, 1532, 1641, 1789
CfoI GCGC 2 cut(s) 128, 1483
Cfr10I RCCGGY 2 cut(s) 1530, 1639
Cfr13I GGNCC 7 cut(s) 300, 776, 879, 1028, 1316, 1588, 1593
CseI GACGC 1 cut(s) 611
Csp6I GTAC 4 cut(s) 253, 678, 815, 1197
CviQI GTAC 4 cut(s) 253, 678, 815, 1197
DdeI CTNAG 7 cut(s) 105, 137, 503, 627, 1320, 1412, 1839
DpnI GATC 6 cut(s) 599, 909, 1221, 1241, 1394, 1861
DpnII GATC 6 cut(s) 597, 907, 1219, 1239, 1392, 1859
DraI TTTAAA 1 cut(s) 795
DrdI GACNNNNNNGTC 1 cut(s) 836
DseDI GACNNNNNNGTC 1 cut(s) 836
EaeI YGGCCR 1 cut(s) 1632
Eam1104I CTCTTC 1 cut(s) 554
EarI CTCTTC 1 cut(s) 554
EciI GGCGGA 1 cut(s) 1852
Eco130I CCWWGG 3 cut(s) 452, 1229, 1779
Eco24I GRGCYC 1 cut(s) 1071
Eco32I GATATC 1 cut(s) 322
Eco47I GGWCC 3 cut(s) 300, 776, 1316
Eco72I CACGTG 1 cut(s) 1678
Eco81I CCTNAGG 1 cut(s) 105
Eco91I GGTNACC 1 cut(s) 1346
EcoO65I GGTNACC 1 cut(s) 1346
EcoRII CCWGG 5 cut(s) 644, 778, 825, 1033, 1424
EcoRV GATATC 1 cut(s) 322
EcoT14I CCWWGG 3 cut(s) 452, 1229, 1779
EcoT22I ATGCAT 1 cut(s) 50
EcoT38I GRGCYC 1 cut(s) 1071
ErhI CCWWGG 3 cut(s) 452, 1229, 1779
FaqI GGGAC 1 cut(s) 1709
FauI CCCGC 2 cut(s) 1562, 1796
FbaI TGATCA 2 cut(s) 597, 907
FokI GGATG 2 cut(s) 459, 973
FriOI GRGCYC 1 cut(s) 1071
FspBI CTAG 5 cut(s) 12, 921, 1151, 1761, 1877
GlaI GCGC 2 cut(s) 127, 1482
GsuI CTGGAG 2 cut(s) 1232, 1465
HaeIII GGCC 6 cut(s) 880, 1029, 1563, 1590, 1595, 1634
HapII CCGG 3 cut(s) 1531, 1591, 1640
HgaI GACGC 1 cut(s) 611
HhaI GCGC 2 cut(s) 128, 1483
Hin1I GRCGYC 1 cut(s) 622
Hin6I GCGC 2 cut(s) 126, 1481
HinP1I GCGC 2 cut(s) 126, 1481
HinfI GANTC 7 cut(s) 100, 706, 898, 1121, 1273, 1404, 1722
HpaII CCGG 3 cut(s) 1531, 1591, 1640
HphI GGTGA 2 cut(s) 73, 1358
Hpy166II GTNNAC 2 cut(s) 255, 730
Hpy188I TCNGA 7 cut(s) 140, 274, 358, 1171, 1392, 1413, 1847
Hpy188III TCNNGA 9 cut(s) 104, 180, 443, 626, 1211, 1294, 1337, 1401, 1444
Hpy8I GTNNAC 2 cut(s) 255, 730
HpyAV CCTTC 8 cut(s) 21, 90, 234, 487, 743, 764, 1271, 1465
HpyCH4III ACNGT 5 cut(s) 345, 403, 833, 1600, 1702
HpyCH4IV ACGT 2 cut(s) 188, 1677
HpyF10VI GCNNNNNNNGC 4 cut(s) 54, 1035, 1640, 1831
HpyF3I CTNAG 7 cut(s) 105, 137, 503, 627, 1320, 1412, 1839
HpySE526I ACGT 2 cut(s) 188, 1677
Hsp92I GRCGYC 1 cut(s) 622
HspAI GCGC 2 cut(s) 126, 1481
KroI GCCGGC 2 cut(s) 1530, 1639
KroNI GCCGGC 2 cut(s) 1532, 1641
Ksp22I TGATCA 2 cut(s) 597, 907
Kzo9I GATC 6 cut(s) 597, 907, 1219, 1239, 1392, 1859
LmnI GCTCC 2 cut(s) 547, 1393
Lsp1109I GCAGC 6 cut(s) 780, 790, 958, 1408, 1449, 1483
LweI GCATC 1 cut(s) 995
MaeI CTAG 5 cut(s) 12, 921, 1151, 1761, 1877
MaeII ACGT 2 cut(s) 188, 1677
MaeIII GTNAC 4 cut(s) 761, 1346, 1448, 1716
MalI GATC 6 cut(s) 599, 909, 1221, 1241, 1394, 1861
MboI GATC 6 cut(s) 597, 907, 1219, 1239, 1392, 1859
MboII GAAGA 8 cut(s) 124, 153, 293, 296, 329, 571, 688, 1318
MfeI CAATTG 2 cut(s) 414, 582
MflI RGATCY 1 cut(s) 1859
MhlI GDGCHC 1 cut(s) 1071
MlyI GAGTC 1 cut(s) 892
MmeI TCCRAC 2 cut(s) 1794, 1825
Mph1103I ATGCAT 1 cut(s) 50
MroNI GCCGGC 2 cut(s) 1530, 1639
MroXI GAANNNNTTC 1 cut(s) 1380
MseI TTAA 4 cut(s) 794, 998, 1095, 1311
MslI CAYNNNNRTG 3 cut(s) 262, 1457, 1615
MspI CCGG 3 cut(s) 1531, 1591, 1640
MspR9I CCNGG 6 cut(s) 646, 780, 827, 1035, 1426, 1592
MunI CAATTG 2 cut(s) 414, 582
Mva1269I GAATGC 1 cut(s) 281
MvaI CCWGG 5 cut(s) 646, 780, 827, 1035, 1426
MvnI CGCG 1 cut(s) 1483
MwoI GCNNNNNNNGC 4 cut(s) 54, 1035, 1640, 1831
NaeI GCCGGC 2 cut(s) 1532, 1641
NciI CCSGG 1 cut(s) 1592
NcoI CCATGG 2 cut(s) 452, 1779
NdeII GATC 6 cut(s) 597, 907, 1219, 1239, 1392, 1859
NgoMIV GCCGGC 2 cut(s) 1530, 1639
NlaIV GGNNCC 2 cut(s) 371, 1389
NmuCI GTSAC 3 cut(s) 761, 1346, 1448
NsiI ATGCAT 1 cut(s) 50
NspI RCATGY 3 cut(s) 1090, 1238, 1795
NspV TTCGAA 1 cut(s) 25
PaqCI CACCTGC 1 cut(s) 285
PciI ACATGT 1 cut(s) 1086
PctI GAATGC 1 cut(s) 281
PdiI GCCGGC 2 cut(s) 1532, 1641
PdmI GAANNNNTTC 1 cut(s) 1380
PfeI GAWTC 6 cut(s) 100, 706, 1121, 1273, 1404, 1722
PflMI CCANNNNNTGG 1 cut(s) 297
PleI GAGTC 1 cut(s) 892
PmaCI CACGTG 1 cut(s) 1678
PmlI CACGTG 1 cut(s) 1678
PpsI GAGTC 1 cut(s) 892
Ppu21I YACGTR 1 cut(s) 1678
PscI ACATGT 1 cut(s) 1086
PshBI ATTAAT 1 cut(s) 1311
Psp6I CCWGG 5 cut(s) 644, 778, 825, 1033, 1424
PspCI CACGTG 1 cut(s) 1678
PspEI GGTNACC 1 cut(s) 1346
PspGI CCWGG 5 cut(s) 644, 778, 825, 1033, 1424
PspN4I GGNNCC 2 cut(s) 371, 1389
PspPI GGNCC 7 cut(s) 300, 776, 879, 1028, 1316, 1588, 1593
PstI CTGCAG 4 cut(s) 770, 1196, 1501, 1555
PsuI RGATCY 1 cut(s) 1859
RsaI GTAC 4 cut(s) 254, 679, 816, 1198
RsaNI GTAC 4 cut(s) 253, 678, 815, 1197
RseI CAYNNNNRTG 3 cut(s) 262, 1457, 1615
SaqAI TTAA 4 cut(s) 794, 998, 1095, 1311
Sau3AI GATC 6 cut(s) 597, 907, 1219, 1239, 1392, 1859
Sau96I GGNCC 7 cut(s) 300, 776, 879, 1028, 1316, 1588, 1593
ScaI AGTACT 2 cut(s) 679, 1198
SchI GAGTC 1 cut(s) 892
ScrFI CCNGG 6 cut(s) 646, 780, 827, 1035, 1426, 1592
SduI GDGCHC 1 cut(s) 1071
SfaNI GCATC 1 cut(s) 995
SfcI CTRYAG 5 cut(s) 766, 1039, 1192, 1497, 1551
SfuI TTCGAA 1 cut(s) 25
SinI GGWCC 3 cut(s) 300, 776, 1316
SmiMI CAYNNNNRTG 3 cut(s) 262, 1457, 1615
SmlI CTYRAG 1 cut(s) 1064
SmoI CTYRAG 1 cut(s) 1064
SsiI CCGC 9 cut(s) 172, 1483, 1486, 1504, 1534, 1569, 1687, 1789, 1863
SspI AATATT 1 cut(s) 1099
SspMI CTAG 5 cut(s) 12, 921, 1151, 1761, 1877
StyD4I CCNGG 6 cut(s) 644, 778, 825, 1033, 1424, 1590
StyI CCWWGG 3 cut(s) 452, 1229, 1779
TaaI ACNGT 5 cut(s) 345, 403, 833, 1600, 1702
TaiI ACGT 2 cut(s) 191, 1680
TaqI TCGA 3 cut(s) 25, 724, 1285
TaqII GACCGA 1 cut(s) 1613
TatI WGTACW 3 cut(s) 252, 677, 1196
TauI GCSGC 4 cut(s) 1486, 1489, 1507, 1537
TfiI GAWTC 6 cut(s) 100, 706, 1121, 1273, 1404, 1722
Tru1I TTAA 4 cut(s) 794, 998, 1095, 1311
Tru9I TTAA 4 cut(s) 794, 998, 1095, 1311
TscAI CASTG 6 cut(s) 406, 770, 1328, 1560, 1603, 1843
TseFI GTSAC 3 cut(s) 761, 1346, 1448
TseI GCWGC 6 cut(s) 768, 803, 971, 1421, 1462, 1496
Tsp45I GTSAC 3 cut(s) 761, 1346, 1448
TspDTI ATGAA 6 cut(s) 321, 572, 653, 882, 1677, 1714
TspGWI ACGGA 1 cut(s) 995
TspRI CASTG 6 cut(s) 406, 770, 1328, 1560, 1603, 1843
Van91I CCANNNNNTGG 1 cut(s) 297
VpaK11BI GGWCC 3 cut(s) 300, 776, 1316
VspI ATTAAT 1 cut(s) 1311
XapI RAATTY 6 cut(s) 144, 205, 446, 524, 1159, 1803
XceI RCATGY 3 cut(s) 1090, 1238, 1795
XcmI CCANNNNNNNNNTGG 3 cut(s) 406, 997, 1022
XmnI GAANNNNTTC 1 cut(s) 1380
XspI CTAG 5 cut(s) 12, 921, 1151, 1761, 1877
ZrmI AGTACT 2 cut(s) 679, 1198
Zsp2I ATGCAT 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.