Rh3CG259600

F-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0000142
Physical Location & Seq
Reverse (-)
25343001 .. 25344161
1161 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG259600.1

Sequence Viewer

Length: 1161 bp
ATGAGTTCCAGACGACGCCCAATCGATGACCTCAACAGGTGGTCCAAGGATCTTCCTGATGAATTGATTGAAATGATTGTGAAGCGTCTAACCCTAGTCGATTCAATCAGATTCGCTGCTGTGTGTCCTTCTTGGACAAGTGTATCATCACAATGGTTTCAACGAGTAACGCGACTTCCATGGCTCTTGAAGTCGAGTGTGTTTCTAGACTCAGAAACTGTGAATTATAATATCTACAGTCCAAGTGAAGACACAGACTACGACCTCAAGTTTCGAAGAGAAAATAATAAGTTGGATGCTTCACGTAGTGATAAGATACGTTGCTCGGGCTCTATTGATGGCTGGTTGATAATGTCTGAATGGACATCGAAAAAGAAAAAGAATATGATTCACTCTGCTAGGACGTCCATCAATTATTTCTTGAACCCAATGACAGGTGATCGTATTAAGCTTCCCCAGCTGACCGGAATCATCCCACGGAGCTCCTCGGCCTCTTCAGATCCAAGATGTTCTGATTGCATTGTTGCAATTGTAGATAGTGATTTGGTGTTTTGCAGGCCAAGTAGTCATGAATCATGTCCTTGGGAAGGGAAAAAATATCATATACTCCGCGTTAAATTTCATGAGGATGGCAAGTTATACGTATTACAACAGGCTGGTGTGAATCGTTATAAACTTGTTGTTCTTGTTCTTGTTTCTGTTCCAGTTTTAGATCCGTTAAATCAATGTCAAGGCAAAGGCAGATGTGAGAAAATTATTGCTTATAGGGAAAAGGCAATATTAGCTGGAATCCCTTCAGAGGAGCCGCGGTGCATCATTTATAGACCATCATTTTTCTGGTCCTCCAAAGGTGAGTTTTTTCTGGTTTGGCGGCTCTGGTGGCCCGGCAGGAAATTTCGTGCGTTAAAGATGGATGATAAAAGTGGTTGTAATCCTGTTTGGGTGAACTCGGAGACGAATGATGTTGCTGAAGACGAAGTAGTCTTCGTCGCCTTACACAGCAGTGACAGCACCTCACTATCAAAGTTGAAGTCATTTACGACAACCATAGATGAGGCTTTTCTTGGACTTTATGGCGGAAAATTCTTCACCTGCCATGGTTCGTTGAATTGTGAGAATCTTTTAGATGGAGTATGGTTTACGCCCAATATAACCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

386

Amino Acids

44.23

Weight (kDa)

8.81

Isoelectric Point (pI)

45.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 17 - 48 6.5e-06 F-box domain
Beta-prop_KIB1-4 PF03478 87 - 343 1.2e-16 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000142)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 228, 672
AarI CACCTGC 1 cut(s) 1100
AasI GACNNNNNNGTC 1 cut(s) 980
AatII GACGTC 1 cut(s) 407
Acc36I ACCTGC 1 cut(s) 1100
AccII CGCG 3 cut(s) 172, 612, 808
AciI CCGC 5 cut(s) 610, 806, 808, 871, 1077
AclWI GGATC 3 cut(s) 57, 494, 707
AcsI RAATTY 3 cut(s) 617, 893, 1082
AcuI CTGAAG 3 cut(s) 480, 780, 990
AcyI GRCGYC 2 cut(s) 16, 404
AdeI CACNNNGTG 1 cut(s) 308
AfiI CCNNNNNNNGG 3 cut(s) 434, 587, 799
AgsI TTSAA 7 cut(s) 71, 105, 161, 190, 424, 1030, 1108
AleI CACNNNNGTG 1 cut(s) 1002
AluBI AGCT 4 cut(s) 451, 460, 483, 785
AluI AGCT 4 cut(s) 451, 460, 483, 785
Alw21I GWGCWC 1 cut(s) 485
Alw26I GTCTC 1 cut(s) 947
AlwI GGATC 3 cut(s) 57, 494, 707
AlwNI CAGNNNCTG 1 cut(s) 218
Ama87I CYCGRG 1 cut(s) 325
AoxI GGCC 3 cut(s) 489, 557, 881
ApeKI GCWGC 1 cut(s) 116
ApoI RAATTY 3 cut(s) 617, 893, 1082
ArsI GACNNNNNNTTYG 2 cut(s) 1016, 1048
Asp700I GAANNNNTTC 1 cut(s) 793
AspS9I GGNCC 3 cut(s) 42, 840, 882
AsuC2I CCSGG 1 cut(s) 885
AsuHPI GGTGA 4 cut(s) 449, 863, 955, 1081
AsuII TTCGAA 1 cut(s) 274
AvaI CYCGRG 1 cut(s) 325
AvaII GGWCC 2 cut(s) 42, 840
BaeI ACNNNNGTAYC 2 cut(s) 126, 159
BanII GRGCYC 2 cut(s) 332, 485
BarI GAAGNNNNNNTAC 2 cut(s) 159, 191
BbsI GAAGAC 3 cut(s) 255, 976, 978
Bbv12I GWGCWC 1 cut(s) 485
BbvI GCAGC 1 cut(s) 103
BccI CCATC 6 cut(s) 332, 416, 623, 835, 904, 1121
BcnI CCSGG 1 cut(s) 885
BcoDI GTCTC 1 cut(s) 947
BfaI CTAG 3 cut(s) 95, 206, 399
BfmI CTRYAG 1 cut(s) 235
BfuAI ACCTGC 1 cut(s) 1100
BisI GCNGC 3 cut(s) 117, 806, 872
BlsI GCNGC 3 cut(s) 118, 807, 873
Bme1390I CCNGG 1 cut(s) 885
Bme18I GGWCC 2 cut(s) 42, 840
BmeT110I CYCGRG 1 cut(s) 325
BmgT120I GGNCC 3 cut(s) 42, 840, 882
BmiI GGNNCC 1 cut(s) 804
BmrFI CCNGG 1 cut(s) 885
BmsI GCATC 2 cut(s) 286, 822
BpiI GAAGAC 3 cut(s) 255, 976, 978
Bpu14I TTCGAA 1 cut(s) 274
BpuEI CTTGAG 1 cut(s) 251
BpuMI CCSGG 1 cut(s) 885
Bsa29I ATCGAT 1 cut(s) 24
BsaAI YACGTR 2 cut(s) 305, 643
BsaHI GRCGYC 2 cut(s) 16, 404
BsaJI CCNNGG 7 cut(s) 45, 179, 476, 486, 581, 806, 1096
BsaWI WCCGGW 1 cut(s) 464
BsaXI ACNNNNNCTCC 2 cut(s) 794, 824
Bsc4I CCNNNNNNNGG 3 cut(s) 434, 587, 799
Bse1I ACTGG 1 cut(s) 704
BseCI ATCGAT 1 cut(s) 24
BseDI CCNNGG 7 cut(s) 45, 179, 476, 486, 581, 806, 1096
BseGI GGATG 4 cut(s) 301, 471, 634, 919
BseLI CCNNNNNNNGG 3 cut(s) 434, 587, 799
BseMII CTCAG 1 cut(s) 225
BseNI ACTGG 1 cut(s) 704
BseRI GAGGAG 2 cut(s) 475, 815
BseXI GCAGC 1 cut(s) 103
BseYI CCCAGC 1 cut(s) 456
Bsh1236I CGCG 3 cut(s) 172, 612, 808
BshFI GGCC 3 cut(s) 491, 559, 883
BshVI ATCGAT 1 cut(s) 24
BsiHKAI GWGCWC 1 cut(s) 485
BsiHKCI CYCGRG 1 cut(s) 325
BsiSI CCGG 2 cut(s) 465, 885
BslI CCNNNNNNNGG 3 cut(s) 434, 587, 799
BsmAI GTCTC 1 cut(s) 947
BsmBI CGTCTC 1 cut(s) 947
BsnI GGCC 3 cut(s) 491, 559, 883
BsoBI CYCGRG 1 cut(s) 325
Bsp119I TTCGAA 1 cut(s) 274
Bsp1286I GDGCHC 2 cut(s) 332, 485
Bsp143I GATC 4 cut(s) 49, 439, 499, 712
Bsp19I CCATGG 2 cut(s) 179, 1096
BspACI CCGC 5 cut(s) 610, 806, 808, 871, 1077
BspANI GGCC 3 cut(s) 491, 559, 883
BspCNI CTCAG 1 cut(s) 224
BspDI ATCGAT 1 cut(s) 24
BspFNI CGCG 3 cut(s) 172, 612, 808
BspHI TCATGA 2 cut(s) 568, 622
BspLI GGNNCC 1 cut(s) 804
BspMI ACCTGC 1 cut(s) 1100
BspPI GGATC 3 cut(s) 57, 494, 707
BspT104I TTCGAA 1 cut(s) 274
BsrI ACTGG 1 cut(s) 704
BssECI CCNNGG 7 cut(s) 45, 179, 476, 486, 581, 806, 1096
BssMI GATC 4 cut(s) 49, 439, 499, 712
BssNI GRCGYC 2 cut(s) 16, 404
BssT1I CCWWGG 4 cut(s) 45, 179, 581, 1096
Bst4CI ACNGT 2 cut(s) 220, 239
Bst6I CTCTTC 2 cut(s) 271, 499
BstACI GRCGYC 2 cut(s) 16, 404
BstBAI YACGTR 2 cut(s) 305, 643
BstBI TTCGAA 1 cut(s) 274
BstC8I GCNNGC 1 cut(s) 557
BstDEI CTNAG 1 cut(s) 211
BstDSI CCRYGG 4 cut(s) 179, 476, 806, 1096
BstENI CCTNNNNNAGG 1 cut(s) 585
BstF5I GGATG 4 cut(s) 301, 471, 634, 919
BstFNI CGCG 3 cut(s) 172, 612, 808
BstKTI GATC 4 cut(s) 52, 442, 502, 715
BstMAI GTCTC 1 cut(s) 947
BstMBI GATC 4 cut(s) 49, 439, 499, 712
BstMWI GCNNNNNNNGC 4 cut(s) 457, 782, 880, 1008
BstSCI CCNGG 1 cut(s) 883
BstSFI CTRYAG 1 cut(s) 235
BstSNI TACGTA 1 cut(s) 643
BstUI CGCG 3 cut(s) 172, 612, 808
BstV1I GCAGC 1 cut(s) 103
BstV2I GAAGAC 3 cut(s) 255, 976, 978
BstX2I RGATCY 3 cut(s) 49, 499, 712
BstYI RGATCY 3 cut(s) 49, 499, 712
Bsu15I ATCGAT 1 cut(s) 24
BsuRI GGCC 3 cut(s) 491, 559, 883
BsuTUI ATCGAT 1 cut(s) 24
BtgI CCRYGG 4 cut(s) 179, 476, 806, 1096
BtsCI GGATG 4 cut(s) 301, 471, 634, 919
BtsI GCAGTG 1 cut(s) 1009
BtsIMutI CAGTG 1 cut(s) 1009
BveI ACCTGC 1 cut(s) 1100
Cac8I GCNNGC 1 cut(s) 557
CaiI CAGNNNCTG 1 cut(s) 218
CciI TCATGA 2 cut(s) 568, 622
Cfr13I GGNCC 3 cut(s) 42, 840, 882
Cfr42I CCGCGG 1 cut(s) 809
ClaI ATCGAT 1 cut(s) 24
CseI GACGC 2 cut(s) 24, 74
CviAII CATG 5 cut(s) 180, 569, 576, 623, 1097
DdeI CTNAG 1 cut(s) 211
DpnI GATC 4 cut(s) 51, 441, 501, 714
DpnII GATC 4 cut(s) 49, 439, 499, 712
DraIII CACNNNGTG 1 cut(s) 308
DrdI GACNNNNNNGTC 1 cut(s) 980
DseDI GACNNNNNNGTC 1 cut(s) 980
Eam1104I CTCTTC 2 cut(s) 271, 499
EarI CTCTTC 2 cut(s) 271, 499
EciI GGCGGA 1 cut(s) 1092
Ecl136II GAGCTC 1 cut(s) 483
Eco105I TACGTA 1 cut(s) 643
Eco130I CCWWGG 4 cut(s) 45, 179, 581, 1096
Eco24I GRGCYC 2 cut(s) 332, 485
Eco47I GGWCC 2 cut(s) 42, 840
Eco53kI GAGCTC 1 cut(s) 483
Eco57I CTGAAG 3 cut(s) 480, 780, 990
Eco88I CYCGRG 1 cut(s) 325
EcoICRI GAGCTC 1 cut(s) 483
EcoNI CCTNNNNNAGG 1 cut(s) 585
EcoT14I CCWWGG 4 cut(s) 45, 179, 581, 1096
EcoT38I GRGCYC 2 cut(s) 332, 485
ErhI CCWWGG 4 cut(s) 45, 179, 581, 1096
Esp3I CGTCTC 1 cut(s) 947
FaeI CATG 5 cut(s) 183, 572, 579, 626, 1100
FatI CATG 5 cut(s) 179, 568, 575, 622, 1096
Fnu4HI GCNGC 3 cut(s) 117, 806, 872
FokI GGATG 4 cut(s) 308, 458, 641, 926
FriOI GRGCYC 2 cut(s) 332, 485
Fsp4HI GCNGC 3 cut(s) 117, 806, 872
FspBI CTAG 3 cut(s) 95, 206, 399
GluI GCNGC 3 cut(s) 117, 806, 872
GsaI CCCAGC 1 cut(s) 460
HaeIII GGCC 3 cut(s) 491, 559, 883
HapII CCGG 2 cut(s) 465, 885
HgaI GACGC 2 cut(s) 24, 74
Hin1I GRCGYC 2 cut(s) 16, 404
Hin1II CATG 5 cut(s) 183, 572, 579, 626, 1100
HindIII AAGCTT 1 cut(s) 449
HinfI GANTC 9 cut(s) 101, 111, 209, 388, 468, 572, 664, 789, 1117
HpaII CCGG 2 cut(s) 465, 885
HphI GGTGA 4 cut(s) 449, 863, 955, 1081
Hpy166II GTNNAC 2 cut(s) 946, 1140
Hpy188I TCNGA 7 cut(s) 110, 214, 358, 499, 514, 799, 952
Hpy188III TCNNGA 7 cut(s) 9, 56, 187, 206, 421, 569, 623
Hpy8I GTNNAC 2 cut(s) 946, 1140
Hpy99I CGWCG 2 cut(s) 18, 992
HpyAV CCTTC 3 cut(s) 138, 581, 804
HpyCH4III ACNGT 2 cut(s) 220, 239
HpyCH4IV ACGT 4 cut(s) 304, 319, 404, 642
HpyCH4V TGCA 4 cut(s) 519, 527, 555, 813
HpyF10VI GCNNNNNNNGC 4 cut(s) 457, 782, 880, 1008
HpyF3I CTNAG 1 cut(s) 211
HpySE526I ACGT 4 cut(s) 304, 319, 404, 642
Hsp92I GRCGYC 2 cut(s) 16, 404
Hsp92II CATG 5 cut(s) 183, 572, 579, 626, 1100
KspI CCGCGG 1 cut(s) 809
Kzo9I GATC 4 cut(s) 49, 439, 499, 712
LmnI GCTCC 3 cut(s) 480, 488, 802
Lsp1109I GCAGC 1 cut(s) 103
LweI GCATC 2 cut(s) 286, 822
MaeI CTAG 3 cut(s) 95, 206, 399
MaeII ACGT 4 cut(s) 304, 319, 404, 642
MaeIII GTNAC 2 cut(s) 166, 1004
MalI GATC 4 cut(s) 51, 441, 501, 714
MboI GATC 4 cut(s) 49, 439, 499, 712
MboII GAAGA 7 cut(s) 44, 260, 288, 486, 976, 983, 1078
MfeI CAATTG 1 cut(s) 528
MflI RGATCY 3 cut(s) 49, 499, 712
MhlI GDGCHC 2 cut(s) 332, 485
MluCI AATT 9 cut(s) 62, 223, 412, 528, 617, 753, 893, 1082, 1108
MlyI GAGTC 1 cut(s) 203
MmeI TCCRAC 1 cut(s) 273
MnlI CCTC 9 cut(s) 41, 275, 496, 502, 619, 793, 853, 1024, 1048
MroXI GAANNNNTTC 1 cut(s) 793
MseI TTAA 4 cut(s) 447, 615, 719, 905
MslI CAYNNNNRTG 3 cut(s) 151, 627, 1002
MspA1I CMGCKG 2 cut(s) 460, 808
MspI CCGG 2 cut(s) 465, 885
MspR9I CCNGG 1 cut(s) 885
MunI CAATTG 1 cut(s) 528
MvnI CGCG 3 cut(s) 172, 612, 808
MwoI GCNNNNNNNGC 4 cut(s) 457, 782, 880, 1008
NciI CCSGG 1 cut(s) 885
NcoI CCATGG 2 cut(s) 179, 1096
NdeII GATC 4 cut(s) 49, 439, 499, 712
NlaIII CATG 5 cut(s) 183, 572, 579, 626, 1100
NlaIV GGNNCC 1 cut(s) 804
NmeAIII GCCGAG 1 cut(s) 467
NmuCI GTSAC 1 cut(s) 1004
NspV TTCGAA 1 cut(s) 274
OliI CACNNNNGTG 1 cut(s) 1002
PagI TCATGA 2 cut(s) 568, 622
PaqCI CACCTGC 1 cut(s) 1100
PcsI WCGNNNNNNNCGW 1 cut(s) 169
PdmI GAANNNNTTC 1 cut(s) 793
PfeI GAWTC 8 cut(s) 101, 111, 388, 468, 572, 664, 789, 1117
PkrI GCNGC 3 cut(s) 118, 807, 873
PleI GAGTC 1 cut(s) 203
PpsI GAGTC 1 cut(s) 203
Ppu21I YACGTR 2 cut(s) 305, 643
PsiI TTATAA 2 cut(s) 228, 672
Psp124BI GAGCTC 1 cut(s) 485
PspFI CCCAGC 1 cut(s) 456
PspN4I GGNNCC 1 cut(s) 804
PspPI GGNCC 3 cut(s) 42, 840, 882
PstNI CAGNNNCTG 1 cut(s) 218
PsuI RGATCY 3 cut(s) 49, 499, 712
PvuII CAGCTG 1 cut(s) 460
RseI CAYNNNNRTG 3 cut(s) 151, 627, 1002
SacI GAGCTC 1 cut(s) 485
SacII CCGCGG 1 cut(s) 809
SaqAI TTAA 4 cut(s) 447, 615, 719, 905
SatI GCNGC 3 cut(s) 117, 806, 872
Sau3AI GATC 4 cut(s) 49, 439, 499, 712
Sau96I GGNCC 3 cut(s) 42, 840, 882
SchI GAGTC 1 cut(s) 203
ScrFI CCNGG 1 cut(s) 885
SduI GDGCHC 2 cut(s) 332, 485
SfaNI GCATC 2 cut(s) 286, 822
SfcI CTRYAG 1 cut(s) 235
Sfr303I CCGCGG 1 cut(s) 809
SfuI TTCGAA 1 cut(s) 274
SgrBI CCGCGG 1 cut(s) 809
SinI GGWCC 2 cut(s) 42, 840
SmiMI CAYNNNNRTG 3 cut(s) 151, 627, 1002
SmlI CTYRAG 1 cut(s) 266
SmoI CTYRAG 1 cut(s) 266
SnaBI TACGTA 1 cut(s) 643
Sse9I AATT 9 cut(s) 62, 223, 412, 528, 617, 753, 893, 1082, 1108
SsiI CCGC 5 cut(s) 610, 806, 808, 871, 1077
SspI AATATT 1 cut(s) 780
SspMI CTAG 3 cut(s) 95, 206, 399
SstI GAGCTC 1 cut(s) 485
StyD4I CCNGG 1 cut(s) 883
StyI CCWWGG 4 cut(s) 45, 179, 581, 1096
TaaI ACNGT 2 cut(s) 220, 239
TaiI ACGT 4 cut(s) 307, 322, 407, 645
TaqI TCGA 5 cut(s) 24, 99, 194, 274, 368
TasI AATT 9 cut(s) 62, 223, 412, 528, 617, 753, 893, 1082, 1108
TauI GCSGC 2 cut(s) 808, 874
TfiI GAWTC 8 cut(s) 101, 111, 388, 468, 572, 664, 789, 1117
Tru1I TTAA 4 cut(s) 447, 615, 719, 905
Tru9I TTAA 4 cut(s) 447, 615, 719, 905
TscAI CASTG 1 cut(s) 1009
TseFI GTSAC 1 cut(s) 1004
TseI GCWGC 1 cut(s) 116
Tsp45I GTSAC 1 cut(s) 1004
TspDTI ATGAA 3 cut(s) 75, 585, 611
TspGWI ACGGA 2 cut(s) 493, 705
TspRI CASTG 1 cut(s) 1009
VpaK11BI GGWCC 2 cut(s) 42, 840
XagI CCTNNNNNAGG 1 cut(s) 585
XapI RAATTY 3 cut(s) 617, 893, 1082
XbaI TCTAGA 1 cut(s) 205
XcmI CCANNNNNNNNNTGG 1 cut(s) 834
XmnI GAANNNNTTC 1 cut(s) 793
XspI CTAG 3 cut(s) 95, 206, 399
ZraI GACGTC 1 cut(s) 405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.