Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0000142

Physical Location & Seq

Genomic Coordinates Reverse (-)

21531626 .. 21533140

Gene Structure 1515 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012710

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGCGTGCATACACCCGCCTGTTAAGAACGATCTTATTGCGCCACAAGCTGGTGATCACTACTACAATTTCCTCTAGATTGATTACAATCTTCTCCAAATTGATTATTCCTGTGCCAACTAGGATAAGATGGGCCAAAAAGGAGATTTGCAGTAGCAGGTGGGGTAAAGAATTTCCAGAAGATATGTTGCAATTAATTCAACAAAGGCTGCCCATTTCAGATCAATTTCAGTTTCGTGCAGTATGCCGGTGTTGCCGAGCCACTAGAGTTGTTTCACTTCCATGGCTTGTGATCGGTGCTCACCCCTTATCTAACACAGACCCTTTCTTTTATAGTCTAGGTGAAAAGAGGGTTTACCAATCGTGTCCCCCACTTATGAGTAGGTGGGGTTGTGTTGGTTCGATTGAGGGGTGGTTGATCATGGTTGACAATGCTCTTTGGCGTCCCGAGGGATTCATGAGTCCTCGATCATTCTACTTATTATTACACAATGATCAGAACCCCCCAAGTAGTAGTAATACTAGTTTTCATACCAGTAACTTTTTTTACAATCCAATGTCAGGTGCAAGAGTCAATCTCCCTTCACAATCCACCGTTCCATGTCGCAACAGCGACCAACCTTCCTTCTTCGGCAAAGTAATAGCCTCTTCTGCACCAACAACCACCCCACCTTGCAATTGTCTTGTGGCTGCAGTATGTTCAGATGGTGGTTTGGCTTTTTGTAGGCGTACCGATAAATCATGGACCTTCATTGATCAGGCTAGACAACTCGTTTTTGATGACATAGAAATAGTAGACGGGAAATTATATGCTGCACCAACGTGGTCTAATGAGGATGCATCACAGTTTTTTATGGTGTTTGAGATCCAAGATGGTGGTGGGTGCCCTCCTACCTATATTGTTGAAAGATTGGAAATCCGTCTACCAATGGTGGCACCTCCAGTAAGACAAATCAATCGTACTGGTGAACTAAAGATTACATGTCACAACATTCACCTGGCAAAAGATTCTACATCAAACAACTTTTTTATGATTCTTCGTGAGAACAGTTTTGTAGTCGACAATGATCCGCCAATTCCTTGGTCTGTGATTATAGGTGATACAGATTTCATCATTCCACCCAAGACTCGAGGGTTTCGGGTGTTTAAACTGGTGCAAAATGCTCGTGGACGTCCTGAATGGTTAGAGATATTTGACCTCGGTGATCGAATACTGTTTGTGAGTGGGGCCGCCAACATATTCATGGATGCCAATGCCAGCAATGGCCCATACTATGATCATCTCCGCCAAGGCAAGATACTTGAAAGAAACTGCATTTATTTTGCTTTTGATAGTTCTTGTTTATCATTAGCATCGCTTTATGGTATGTTTCTTTTCGGAAGATCAACGGTGGCAAGGCATGATGTTGGGGTGTTTTCCTTGAAGGACTGCAAGATTAGACCTCTTACTAATTTCCCTGATTGTCCTACCCAGCTAGGAGTTCGGTCTGTTTGGTTCACACCAAATACTCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030684 GO:0030686 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904 GO:2000232

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT_2 Pescadillo_N

Protein Analysis

505

Amino Acids

57.15

Weight (kDa)

8.93

Isoelectric Point (pI)

51.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	110 - 473	9.9e-31	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000142)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica	MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica	Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis	pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis	RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata	RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora	Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa	Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha	Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana	Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	147
AatII	GACGTC	1 cut(s)	1174
Acc36I	ACCTGC	1 cut(s)	147
AccB1I	GGYRCC	2 cut(s)	882, 934
AccB7I	CCANNNNNTGG	1 cut(s)	49
AccI	GTMKAC	3 cut(s)	795, 922, 1059
AciI	CCGC	4 cut(s)	16, 1070, 1230, 1285
AclWI	GGATC	2 cut(s)	859, 1061
AcsI	RAATTY	1 cut(s)	170
AcyI	GRCGYC	2 cut(s)	442, 1171
AfaI	GTAC	2 cut(s)	730, 961
AfiI	CCNNNNNNNGG	2 cut(s)	49, 560
AflIII	ACRYGT	1 cut(s)	980
AgsI	TTSAA	4 cut(s)	200, 905, 1304, 1423
AhlI	ACTAGT	1 cut(s)	521
AjnI	CCWGG	1 cut(s)	996
AleI	CACNNNNGTG	1 cut(s)	820
AluBI	AGCT	2 cut(s)	49, 1474
AluI	AGCT	2 cut(s)	49, 1474
Alw21I	GWGCWC	1 cut(s)	301
AlwI	GGATC	2 cut(s)	859, 1061
Ama87I	CYCGRG	2 cut(s)	446, 1128
AoxI	GGCC	3 cut(s)	132, 1227, 1264
ApeKI	GCWGC	3 cut(s)	208, 689, 812
ApoI	RAATTY	1 cut(s)	170
AseI	ATTAAT	1 cut(s)	194
AspLEI	GCGC	1 cut(s)	42
AspS9I	GGNCC	4 cut(s)	132, 744, 1227, 1265
AsuHPI	GGTGA	7 cut(s)	64, 293, 353, 977, 986, 1109, 1214
AvaI	CYCGRG	2 cut(s)	446, 1128
AvaII	GGWCC	1 cut(s)	744
BaeGI	GKGCMC	1 cut(s)	887
BanI	GGYRCC	2 cut(s)	882, 934
BauI	CACGAG	1 cut(s)	1164
Bbv12I	GWGCWC	1 cut(s)	301
BbvI	GCAGC	3 cut(s)	195, 676, 799
BccI	CCATC	3 cut(s)	123, 698, 866
BcgI	CGANNNNNNTGC	4 cut(s)	19, 53, 1145, 1179
BciT130I	CCWGG	1 cut(s)	998
BclI	TGATCA	5 cut(s)	54, 417, 493, 754, 1276
BcuI	ACTAGT	1 cut(s)	521
BfaI	CTAG	7 cut(s)	75, 120, 264, 338, 522, 762, 1475
BfmI	CTRYAG	1 cut(s)	690
BfuAI	ACCTGC	1 cut(s)	147
BisI	GCNGC	4 cut(s)	209, 690, 813, 1230
BlsI	GCNGC	4 cut(s)	210, 691, 814, 1231
Bme1390I	CCNGG	1 cut(s)	998
Bme18I	GGWCC	1 cut(s)	744
BmeT110I	CYCGRG	2 cut(s)	446, 1128
BmgT120I	GGNCC	4 cut(s)	132, 744, 1227, 1265
BmiI	GGNNCC	3 cut(s)	884, 936, 1228
BmrFI	CCNGG	1 cut(s)	998
BmsI	GCATC	4 cut(s)	826, 848, 1237, 1361
BplI	GAGNNNNNCTC	2 cut(s)	561, 593
BpmI	CTGGAG	1 cut(s)	924
BsaBI	GATNNNNATC	1 cut(s)	86
BsaHI	GRCGYC	2 cut(s)	442, 1171
BsaJI	CCNNGG	5 cut(s)	281, 447, 1079, 1198, 1288
Bsc4I	CCNNNNNNNGG	2 cut(s)	49, 560
Bse118I	RCCGGY	1 cut(s)	246
Bse1I	ACTGG	4 cut(s)	534, 941, 967, 1155
Bse3DI	GCAATG	1 cut(s)	1267
Bse8I	GATNNNNATC	1 cut(s)	86
BseBI	CCWGG	1 cut(s)	998
BseDI	CCNNGG	5 cut(s)	281, 447, 1079, 1198, 1288
BseGI	GGATG	2 cut(s)	841, 1252
BseJI	GATNNNNATC	1 cut(s)	86
BseLI	CCNNNNNNNGG	2 cut(s)	49, 560
BseMI	GCAATG	1 cut(s)	1267
BseNI	ACTGG	4 cut(s)	534, 941, 967, 1155
BseSI	GKGCMC	1 cut(s)	887
BseXI	GCAGC	3 cut(s)	195, 676, 799
BseYI	CCCAGC	1 cut(s)	1470
BsgI	GTGCAG	3 cut(s)	258, 636, 798
BshFI	GGCC	3 cut(s)	134, 1229, 1266
BshNI	GGYRCC	2 cut(s)	882, 934
BsiHKAI	GWGCWC	1 cut(s)	301
BsiHKCI	CYCGRG	2 cut(s)	446, 1128
BsiSI	CCGG	1 cut(s)	247
BslFI	GGGAC	2 cut(s)	351, 429
BslI	CCNNNNNNNGG	2 cut(s)	49, 560
BsmFI	GGGAC	2 cut(s)	351, 429
BsnI	GGCC	3 cut(s)	134, 1229, 1266
BsoBI	CYCGRG	2 cut(s)	446, 1128
Bsp1286I	GDGCHC	2 cut(s)	301, 887
Bsp19I	CCATGG	1 cut(s)	281
BspACI	CCGC	4 cut(s)	16, 1070, 1230, 1285
BspANI	GGCC	3 cut(s)	134, 1229, 1266
BspHI	TCATGA	1 cut(s)	456
BspLI	GGNNCC	3 cut(s)	884, 936, 1228
BspMAI	CTGCAG	1 cut(s)	694
BspMI	ACCTGC	1 cut(s)	147
BspPI	GGATC	2 cut(s)	859, 1061
BspT107I	GGYRCC	2 cut(s)	882, 934
BsrDI	GCAATG	1 cut(s)	1267
BsrFI	RCCGGY	1 cut(s)	246
BsrI	ACTGG	4 cut(s)	534, 941, 967, 1155
BssAI	RCCGGY	1 cut(s)	246
BssECI	CCNNGG	5 cut(s)	281, 447, 1079, 1198, 1288
BssNI	GRCGYC	2 cut(s)	442, 1171
BssSI	CACGAG	1 cut(s)	1164
BssT1I	CCWWGG	3 cut(s)	281, 1079, 1288
Bst2BI	CACGAG	1 cut(s)	1164
Bst2UI	CCWGG	1 cut(s)	998
Bst4CI	ACNGT	5 cut(s)	595, 846, 1049, 1215, 1390
Bst6I	CTCTTC	1 cut(s)	652
BstACI	GRCGYC	2 cut(s)	442, 1171
BstC8I	GCNNGC	2 cut(s)	6, 1258
BstDSI	CCRYGG	1 cut(s)	281
BstF5I	GGATG	2 cut(s)	841, 1252
BstHHI	GCGC	1 cut(s)	42
BstMWI	GCNNNNNNNGC	3 cut(s)	46, 252, 650
BstNI	CCWGG	1 cut(s)	998
BstNSI	RCATGY	1 cut(s)	984
BstSCI	CCNGG	1 cut(s)	996
BstSFI	CTRYAG	1 cut(s)	690
BstSLI	GKGCMC	1 cut(s)	887
BstV1I	GCAGC	3 cut(s)	195, 676, 799
BstX2I	RGATCY	1 cut(s)	864
BstXI	CCANNNNNNTGG	2 cut(s)	875, 1080
BstYI	RGATCY	1 cut(s)	864
BsuRI	GGCC	3 cut(s)	134, 1229, 1266
BtgI	CCRYGG	1 cut(s)	281
BtgZI	GCGATG	1 cut(s)	1338
BtsCI	GGATG	2 cut(s)	841, 1252
BveI	ACCTGC	1 cut(s)	147
Cac8I	GCNNGC	2 cut(s)	6, 1258
CciI	TCATGA	1 cut(s)	456
CfoI	GCGC	1 cut(s)	42
Cfr10I	RCCGGY	1 cut(s)	246
Cfr13I	GGNCC	4 cut(s)	132, 744, 1227, 1265
CseI	GACGC	1 cut(s)	431
Csp6I	GTAC	2 cut(s)	729, 960
CspCI	CAANNNNNGTGG	2 cut(s)	250, 285
CviAII	CATG	8 cut(s)	282, 421, 457, 600, 741, 981, 1243, 1400
CviQI	GTAC	2 cut(s)	729, 960
DraI	TTTAAA	1 cut(s)	1147
Eam1104I	CTCTTC	1 cut(s)	652
EarI	CTCTTC	1 cut(s)	652
EciI	GGCGGA	2 cut(s)	1059, 1274
Eco130I	CCWWGG	3 cut(s)	281, 1079, 1288
Eco47I	GGWCC	1 cut(s)	744
Eco88I	CYCGRG	2 cut(s)	446, 1128
EcoRII	CCWGG	1 cut(s)	996
EcoT14I	CCWWGG	3 cut(s)	281, 1079, 1288
EcoT22I	ATGCAT	1 cut(s)	841
ErhI	CCWWGG	3 cut(s)	281, 1079, 1288
FaeI	CATG	8 cut(s)	285, 424, 460, 603, 744, 984, 1246, 1403
FaqI	GGGAC	2 cut(s)	351, 429
FatI	CATG	8 cut(s)	281, 420, 456, 599, 740, 980, 1242, 1399
FauI	CCCGC	1 cut(s)	23
FbaI	TGATCA	5 cut(s)	54, 417, 493, 754, 1276
FblI	GTMKAC	3 cut(s)	795, 922, 1059
Fnu4HI	GCNGC	4 cut(s)	209, 690, 813, 1230
FokI	GGATG	2 cut(s)	848, 1259
Fsp4HI	GCNGC	4 cut(s)	209, 690, 813, 1230
FspBI	CTAG	7 cut(s)	75, 120, 264, 338, 522, 762, 1475
GlaI	GCGC	1 cut(s)	41
GluI	GCNGC	4 cut(s)	209, 690, 813, 1230
GsaI	CCCAGC	1 cut(s)	1474
GsuI	CTGGAG	1 cut(s)	924
HaeIII	GGCC	3 cut(s)	134, 1229, 1266
HapII	CCGG	1 cut(s)	247
HgaI	GACGC	1 cut(s)	431
HhaI	GCGC	1 cut(s)	42
Hin1I	GRCGYC	2 cut(s)	442, 1171
Hin1II	CATG	8 cut(s)	285, 424, 460, 603, 744, 984, 1246, 1403
Hin6I	GCGC	1 cut(s)	40
HinP1I	GCGC	1 cut(s)	40
HincII	GTYRAC	2 cut(s)	427, 1060
HindII	GTYRAC	2 cut(s)	427, 1060
HinfI	GANTC	6 cut(s)	453, 460, 570, 1007, 1033, 1126
HpaII	CCGG	1 cut(s)	247
HphI	GGTGA	7 cut(s)	64, 293, 353, 977, 986, 1109, 1214
Hpy166II	GTNNAC	8 cut(s)	355, 427, 796, 923, 968, 1060, 1169, 1497
Hpy188I	TCNGA	4 cut(s)	220, 498, 703, 1379
Hpy188III	TCNNGA	6 cut(s)	75, 176, 446, 457, 1040, 1175
Hpy8I	GTNNAC	8 cut(s)	355, 427, 796, 923, 968, 1060, 1169, 1497
HpyAV	CCTTC	5 cut(s)	591, 630, 634, 757, 1417
HpyCH4III	ACNGT	5 cut(s)	595, 846, 1049, 1215, 1390
HpyCH4IV	ACGT	2 cut(s)	821, 1171
HpyF10VI	GCNNNNNNNGC	3 cut(s)	46, 252, 650
HpySE526I	ACGT	2 cut(s)	821, 1171
Hsp92I	GRCGYC	2 cut(s)	442, 1171
Hsp92II	CATG	8 cut(s)	285, 424, 460, 603, 744, 984, 1246, 1403
HspAI	GCGC	1 cut(s)	40
Ksp22I	TGATCA	5 cut(s)	54, 417, 493, 754, 1276
Lsp1109I	GCAGC	3 cut(s)	195, 676, 799
LweI	GCATC	4 cut(s)	826, 848, 1237, 1361
MaeI	CTAG	7 cut(s)	75, 120, 264, 338, 522, 762, 1475
MaeII	ACGT	2 cut(s)	821, 1171
MaeIII	GTNAC	2 cut(s)	536, 983
MboII	GAAGA	6 cut(s)	82, 191, 619, 639, 1028, 1392
MfeI	CAATTG	1 cut(s)	676
MflI	RGATCY	1 cut(s)	864
MhlI	GDGCHC	2 cut(s)	301, 887
MlyI	GAGTC	3 cut(s)	469, 579, 1120
Mph1103I	ATGCAT	1 cut(s)	841
MseI	TTAA	3 cut(s)	23, 194, 1146
MslI	CAYNNNNRTG	3 cut(s)	280, 820, 1241
MspI	CCGG	1 cut(s)	247
MspR9I	CCNGG	1 cut(s)	998
MssI	GTTTAAAC	1 cut(s)	1147
MunI	CAATTG	1 cut(s)	676
MvaI	CCWGG	1 cut(s)	998
MwoI	GCNNNNNNNGC	3 cut(s)	46, 252, 650
NcoI	CCATGG	1 cut(s)	281
NlaIII	CATG	8 cut(s)	285, 424, 460, 603, 744, 984, 1246, 1403
NlaIV	GGNNCC	3 cut(s)	884, 936, 1228
NmeAIII	GCCGAG	1 cut(s)	281
NmuCI	GTSAC	1 cut(s)	983
NsiI	ATGCAT	1 cut(s)	841
NspI	RCATGY	1 cut(s)	984
OliI	CACNNNNGTG	1 cut(s)	820
PaeR7I	CTCGAG	1 cut(s)	1128
PagI	TCATGA	1 cut(s)	456
PaqCI	CACCTGC	1 cut(s)	147
PciI	ACATGT	1 cut(s)	980
PfeI	GAWTC	3 cut(s)	453, 1007, 1033
PflMI	CCANNNNNTGG	1 cut(s)	49
PkrI	GCNGC	4 cut(s)	210, 691, 814, 1231
PleI	GAGTC	3 cut(s)	468, 578, 1120
PmeI	GTTTAAAC	1 cut(s)	1147
PpsI	GAGTC	3 cut(s)	468, 578, 1120
PscI	ACATGT	1 cut(s)	980
PshBI	ATTAAT	1 cut(s)	194
Psp6I	CCWGG	1 cut(s)	996
PspFI	CCCAGC	1 cut(s)	1470
PspGI	CCWGG	1 cut(s)	996
PspN4I	GGNNCC	3 cut(s)	884, 936, 1228
PspPI	GGNCC	4 cut(s)	132, 744, 1227, 1265
PspXI	VCTCGAGB	1 cut(s)	1128
PstI	CTGCAG	1 cut(s)	694
PsuI	RGATCY	1 cut(s)	864
RsaI	GTAC	2 cut(s)	730, 961
RsaNI	GTAC	2 cut(s)	729, 960
RseI	CAYNNNNRTG	3 cut(s)	280, 820, 1241
SalI	GTCGAC	1 cut(s)	1058
SaqAI	TTAA	3 cut(s)	23, 194, 1146
SatI	GCNGC	4 cut(s)	209, 690, 813, 1230
Sau96I	GGNCC	4 cut(s)	132, 744, 1227, 1265
SchI	GAGTC	3 cut(s)	469, 579, 1120
ScrFI	CCNGG	1 cut(s)	998
SduI	GDGCHC	2 cut(s)	301, 887
SfaNI	GCATC	4 cut(s)	826, 848, 1237, 1361
SfcI	CTRYAG	1 cut(s)	690
Sfr274I	CTCGAG	1 cut(s)	1128
SinI	GGWCC	1 cut(s)	744
SlaI	CTCGAG	1 cut(s)	1128
SmiMI	CAYNNNNRTG	3 cut(s)	280, 820, 1241
SmlI	CTYRAG	1 cut(s)	1128
SmoI	CTYRAG	1 cut(s)	1128
SpeI	ACTAGT	1 cut(s)	521
SsiI	CCGC	4 cut(s)	16, 1070, 1230, 1285
SspMI	CTAG	7 cut(s)	75, 120, 264, 338, 522, 762, 1475
StyD4I	CCNGG	1 cut(s)	996
StyI	CCWWGG	3 cut(s)	281, 1079, 1288
TaaI	ACNGT	5 cut(s)	595, 846, 1049, 1215, 1390
TaiI	ACGT	2 cut(s)	824, 1174
TaqI	TCGA	5 cut(s)	401, 466, 1059, 1129, 1207
TaqII	GACCGA	1 cut(s)	1473
TauI	GCSGC	1 cut(s)	1232
TfiI	GAWTC	3 cut(s)	453, 1007, 1033
Tru1I	TTAA	3 cut(s)	23, 194, 1146
Tru9I	TTAA	3 cut(s)	23, 194, 1146
TseFI	GTSAC	1 cut(s)	983
TseI	GCWGC	3 cut(s)	208, 689, 812
Tsp45I	GTSAC	1 cut(s)	983
TspDTI	ATGAA	5 cut(s)	445, 518, 739, 1099, 1231
TspGWI	ACGGA	1 cut(s)	908
Van91I	CCANNNNNTGG	1 cut(s)	49
VpaK11BI	GGWCC	1 cut(s)	744
VspI	ATTAAT	1 cut(s)	194
XapI	RAATTY	1 cut(s)	170
XbaI	TCTAGA	1 cut(s)	74
XceI	RCATGY	1 cut(s)	984
XcmI	CCANNNNNNNNNTGG	2 cut(s)	875, 1240
XhoI	CTCGAG	1 cut(s)	1128
XmiI	GTMKAC	3 cut(s)	795, 922, 1059
XspI	CTAG	7 cut(s)	75, 120, 264, 338, 522, 762, 1475
ZraI	GACGTC	1 cut(s)	1172
Zsp2I	ATGCAT	1 cut(s)	841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.