Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0000142

Physical Location & Seq

Genomic Coordinates Forward (+)

14765692 .. 14773928

Gene Structure 8237 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G008730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1068 bp

ATGTCAATGACGAAGAAGGAGGAGGAACAAGAGGAGAGGTGGTCGAAAGAACTTCCAGAACATATCTTGCAATTGATACCACAAAGGCTATGCATATCAGATTACCAAGTGTTTCGCCAAGTATGCCCTAATTGGCGAGCCGCGGTTGATATAGGCATCGCCACCAAGACTCCTTGCCTTCCCGCTCCAGAACTCCCATGGCTTTTGCTCAGGAGAGATCCCAAATTCTTCCCATCAATTAATATTGCCGATTATCCTCCTGATCCCCCAAATCTAGAAGATGAGTCATATACTGGCCCGGTGTGGAACCCTTCTGCTTCCCTAACCTGTCTTGGGTCAATTGGTTCCTGGCTGATCGTAGCTGCTCATCAACAATGTCAGAATGACAACAGTACCACTGTCGTCAACTTCTTCTTGAATCCGGTATCTCGTGTCCGAGTGATGCTCCCATCGCAGTCTACCCTTCAAGAAAATTGCTCCTTCAGCGGCAATACAACCTTGCTCTACAAGAAAATTGTAGCCTCTTCACCGCCAACGTTAACGACAGGGCTACAGAAGGAGGATTGTCTTGTGGCTGGTATTGTTTCCCCAGGTATTTTGGCTTTTTGTAGGCCGAATGATACATCATGGACCCTCATTGGGAACATTTTAGATAAGCCCAGATTTATAGATATATTTCTATTTGATGGAAAACTATATGCTATAACTATAGTCGGAAACCACAGCTCTCAAGATGCCAAGGTCATTAGGGCTGATAGGATGCTTGGCCCGGTGACCCGGGTCCCGTATTTTACTGATTTGGAATGGCGATACCCTTGCCTAGCAAAAGATTCTGCATCCAAAGGAGTAACCGACTGTAAGCCGCCTCAGCGTCTGAATGGAAAAATGTGGGAGCCGATTACCGACCTTGGTGATCGGATATTGTTTCCGAGAGACATAAGTACTAAGGTCATCAATGACGAGACTATTACAGCATTAATTAAACCCCTATCTGTTCCTGAAGATTATTCATCTACCATATCCGATGCTAACAGTCAAACTCATTGGTTCACACCATATCCATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030684 GO:0030686 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904 GO:2000232

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT_2 Pescadillo_N

Protein Analysis

355

Amino Acids

39.91

Weight (kDa)

5.51

Isoelectric Point (pI)

47.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	17 - 50	1.4e-06	F-box domain
Beta-prop_KIB1-4	PF03478	97 - 247	1e-17	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000142)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica	MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica	Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis	pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis	RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata	RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora	Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa	Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha	Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana	Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	185
AccI	GTMKAC	1 cut(s)	458
AccII	CGCG	1 cut(s)	143
AciI	CCGC	6 cut(s)	141, 143, 183, 486, 530, 863
AclI	AACGTT	1 cut(s)	536
AclWI	GGATC	2 cut(s)	212, 257
AcsI	RAATTY	1 cut(s)	224
AcuI	CTGAAG	2 cut(s)	466, 1020
AfaI	GTAC	2 cut(s)	394, 943
AfiI	CCNNNNNNNGG	2 cut(s)	333, 639
AgsI	TTSAA	2 cut(s)	418, 467
AjnI	CCWGG	2 cut(s)	347, 589
AluBI	AGCT	2 cut(s)	362, 726
AluI	AGCT	2 cut(s)	362, 726
Alw26I	GTCTC	2 cut(s)	927, 956
AlwI	GGATC	2 cut(s)	212, 257
AlwNI	CAGNNNCTG	1 cut(s)	874
Ama87I	CYCGRG	1 cut(s)	777
AoxI	GGCC	3 cut(s)	295, 611, 766
ApeKI	GCWGC	1 cut(s)	362
ApoI	RAATTY	1 cut(s)	224
AseI	ATTAAT	2 cut(s)	240, 977
AspS9I	GGNCC	4 cut(s)	296, 630, 767, 781
AsuC2I	CCSGG	4 cut(s)	299, 770, 778, 779
AsuHPI	GGTGA	3 cut(s)	519, 784, 923
AvaI	CYCGRG	1 cut(s)	777
AvaII	GGWCC	2 cut(s)	630, 781
BaeI	ACNNNNGTAYC	2 cut(s)	376, 409
BauI	CACGAG	1 cut(s)	429
BbvCI	CCTCAGC	1 cut(s)	867
BbvI	GCAGC	1 cut(s)	349
BccI	CCATC	3 cut(s)	241, 457, 680
BcgI	CGANNNNNNTGC	2 cut(s)	798, 832
BciT130I	CCWGG	2 cut(s)	349, 591
BcnI	CCSGG	4 cut(s)	299, 770, 778, 779
BcoDI	GTCTC	2 cut(s)	927, 956
BfaI	CTAG	2 cut(s)	275, 821
BfmI	CTRYAG	2 cut(s)	551, 708
BisI	GCNGC	4 cut(s)	141, 363, 487, 863
BlsI	GCNGC	4 cut(s)	142, 364, 488, 864
BmcAI	AGTACT	1 cut(s)	943
Bme1390I	CCNGG	6 cut(s)	299, 349, 591, 770, 778, 779
Bme18I	GGWCC	2 cut(s)	630, 781
BmeT110I	CYCGRG	1 cut(s)	777
BmgT120I	GGNCC	4 cut(s)	296, 630, 767, 781
BmiI	GGNNCC	6 cut(s)	308, 346, 632, 782, 783, 894
BmrFI	CCNGG	6 cut(s)	299, 349, 591, 770, 778, 779
BmsI	GCATC	6 cut(s)	165, 432, 724, 750, 845, 1015
BoxI	GACNNNNGTC	1 cut(s)	779
BplI	GAGNNNNNCTC	2 cut(s)	429, 461
BpmI	CTGGAG	1 cut(s)	171
Bpu10I	CCTNAGC	2 cut(s)	209, 867
BpuEI	CTTGAG	1 cut(s)	714
BpuMI	CCSGG	4 cut(s)	299, 770, 778, 779
BsaJI	CCNNGG	6 cut(s)	141, 197, 589, 738, 777, 907
BsaWI	WCCGGW	1 cut(s)	421
BsaXI	ACNNNNNCTCC	4 cut(s)	26, 56, 154, 184
Bsc4I	CCNNNNNNNGG	2 cut(s)	333, 639
Bse1I	ACTGG	1 cut(s)	298
BseBI	CCWGG	2 cut(s)	349, 591
BseDI	CCNNGG	6 cut(s)	141, 197, 589, 738, 777, 907
BseGI	GGATG	2 cut(s)	765, 836
BseLI	CCNNNNNNNGG	2 cut(s)	333, 639
BseMII	CTCAG	2 cut(s)	223, 881
BseNI	ACTGG	1 cut(s)	298
BseRI	GAGGAG	2 cut(s)	35, 47
BseXI	GCAGC	1 cut(s)	349
Bsh1236I	CGCG	1 cut(s)	143
BshFI	GGCC	3 cut(s)	297, 613, 768
BsiHKCI	CYCGRG	1 cut(s)	777
BsiSI	CCGG	4 cut(s)	299, 422, 770, 778
BslFI	GGGAC	1 cut(s)	767
BslI	CCNNNNNNNGG	2 cut(s)	333, 639
BsmAI	GTCTC	2 cut(s)	927, 956
BsmFI	GGGAC	1 cut(s)	767
BsnI	GGCC	3 cut(s)	297, 613, 768
BsoBI	CYCGRG	1 cut(s)	777
Bsp143I	GATC	4 cut(s)	217, 262, 354, 913
Bsp19I	CCATGG	1 cut(s)	197
BspACI	CCGC	6 cut(s)	141, 143, 183, 486, 530, 863
BspANI	GGCC	3 cut(s)	297, 613, 768
BspCNI	CTCAG	2 cut(s)	222, 880
BspFNI	CGCG	1 cut(s)	143
BspLI	GGNNCC	6 cut(s)	308, 346, 632, 782, 783, 894
BspPI	GGATC	2 cut(s)	212, 257
BsrBI	CCGCTC	1 cut(s)	185
BsrI	ACTGG	1 cut(s)	298
BssECI	CCNNGG	6 cut(s)	141, 197, 589, 738, 777, 907
BssMI	GATC	4 cut(s)	217, 262, 354, 913
BssSI	CACGAG	1 cut(s)	429
BssT1I	CCWWGG	3 cut(s)	197, 738, 907
Bst2BI	CACGAG	1 cut(s)	429
Bst2UI	CCWGG	2 cut(s)	349, 591
Bst4CI	ACNGT	4 cut(s)	392, 400, 857, 1034
Bst6I	CTCTTC	1 cut(s)	529
BstC8I	GCNNGC	1 cut(s)	138
BstDEI	CTNAG	3 cut(s)	209, 867, 945
BstDSI	CCRYGG	2 cut(s)	141, 197
BstEII	GGTNACC	1 cut(s)	772
BstF5I	GGATG	2 cut(s)	765, 836
BstFNI	CGCG	1 cut(s)	143
BstKTI	GATC	4 cut(s)	220, 265, 357, 916
BstMAI	GTCTC	2 cut(s)	927, 956
BstMBI	GATC	4 cut(s)	217, 262, 354, 913
BstMWI	GCNNNNNNNGC	4 cut(s)	123, 451, 483, 868
BstNI	CCWGG	2 cut(s)	349, 591
BstPAI	GACNNNNGTC	1 cut(s)	779
BstPI	GGTNACC	1 cut(s)	772
BstSCI	CCNGG	6 cut(s)	297, 347, 589, 768, 776, 777
BstSFI	CTRYAG	2 cut(s)	551, 708
BstUI	CGCG	1 cut(s)	143
BstV1I	GCAGC	1 cut(s)	349
BstX2I	RGATCY	1 cut(s)	217
BstYI	RGATCY	1 cut(s)	217
BsuRI	GGCC	3 cut(s)	297, 613, 768
BtgI	CCRYGG	2 cut(s)	141, 197
BtgZI	GCGATG	2 cut(s)	142, 435
BtsCI	GGATG	2 cut(s)	765, 836
BtsIMutI	CAGTG	1 cut(s)	396
Cac8I	GCNNGC	1 cut(s)	138
CaiI	CAGNNNCTG	1 cut(s)	874
Cfr13I	GGNCC	4 cut(s)	296, 630, 767, 781
Cfr42I	CCGCGG	1 cut(s)	144
Cfr9I	CCCGGG	1 cut(s)	777
CseI	GACGC	1 cut(s)	860
Csp6I	GTAC	2 cut(s)	393, 942
CviAII	CATG	2 cut(s)	198, 627
CviQI	GTAC	2 cut(s)	393, 942
DdeI	CTNAG	3 cut(s)	209, 867, 945
DpnI	GATC	4 cut(s)	219, 264, 356, 915
DpnII	GATC	4 cut(s)	217, 262, 354, 913
Eam1104I	CTCTTC	1 cut(s)	529
EarI	CTCTTC	1 cut(s)	529
Eco130I	CCWWGG	3 cut(s)	197, 738, 907
Eco47I	GGWCC	2 cut(s)	630, 781
Eco57I	CTGAAG	2 cut(s)	466, 1020
Eco88I	CYCGRG	1 cut(s)	777
Eco91I	GGTNACC	1 cut(s)	772
EcoO109I	RGGNCCY	1 cut(s)	781
EcoO65I	GGTNACC	1 cut(s)	772
EcoRII	CCWGG	2 cut(s)	347, 589
EcoT14I	CCWWGG	3 cut(s)	197, 738, 907
EcoT22I	ATGCAT	1 cut(s)	95
ErhI	CCWWGG	3 cut(s)	197, 738, 907
FaeI	CATG	2 cut(s)	201, 630
FaqI	GGGAC	1 cut(s)	767
FatI	CATG	2 cut(s)	197, 626
FauI	CCCGC	1 cut(s)	190
FblI	GTMKAC	1 cut(s)	458
Fnu4HI	GCNGC	4 cut(s)	141, 363, 487, 863
FokI	GGATG	2 cut(s)	772, 823
Fsp4HI	GCNGC	4 cut(s)	141, 363, 487, 863
FspBI	CTAG	2 cut(s)	275, 821
GluI	GCNGC	4 cut(s)	141, 363, 487, 863
GsuI	CTGGAG	1 cut(s)	171
HaeIII	GGCC	3 cut(s)	297, 613, 768
HapII	CCGG	4 cut(s)	299, 422, 770, 778
HgaI	GACGC	1 cut(s)	860
Hin1II	CATG	2 cut(s)	201, 630
HincII	GTYRAC	2 cut(s)	406, 540
HindII	GTYRAC	2 cut(s)	406, 540
HinfI	GANTC	4 cut(s)	169, 284, 418, 830
HpaI	GTTAAC	1 cut(s)	540
HpaII	CCGG	4 cut(s)	299, 422, 770, 778
HphI	GGTGA	3 cut(s)	519, 784, 923
Hpy166II	GTNNAC	4 cut(s)	406, 459, 540, 1050
Hpy188I	TCNGA	8 cut(s)	100, 381, 437, 716, 876, 918, 930, 1024
Hpy188III	TCNNGA	9 cut(s)	56, 188, 211, 260, 275, 415, 467, 731, 998
Hpy8I	GTNNAC	4 cut(s)	406, 459, 540, 1050
HpyAV	CCTTC	6 cut(s)	10, 188, 321, 473, 490, 550
HpyCH4III	ACNGT	4 cut(s)	392, 400, 857, 1034
HpyCH4IV	ACGT	1 cut(s)	536
HpyCH4V	TGCA	3 cut(s)	70, 93, 836
HpyF10VI	GCNNNNNNNGC	4 cut(s)	123, 451, 483, 868
HpyF3I	CTNAG	3 cut(s)	209, 867, 945
HpySE526I	ACGT	1 cut(s)	536
Hsp92II	CATG	2 cut(s)	201, 630
KflI	GGGWCCC	1 cut(s)	781
KspAI	GTTAAC	1 cut(s)	540
KspI	CCGCGG	1 cut(s)	144
Kzo9I	GATC	4 cut(s)	217, 262, 354, 913
LmnI	GCTCC	4 cut(s)	190, 450, 482, 892
Lsp1109I	GCAGC	1 cut(s)	349
LweI	GCATC	6 cut(s)	165, 432, 724, 750, 845, 1015
MaeI	CTAG	2 cut(s)	275, 821
MaeII	ACGT	1 cut(s)	536
MaeIII	GTNAC	2 cut(s)	772, 847
MalI	GATC	4 cut(s)	219, 264, 356, 915
MbiI	CCGCTC	1 cut(s)	185
MboI	GATC	4 cut(s)	217, 262, 354, 913
MboII	GAAGA	6 cut(s)	25, 220, 290, 403, 516, 1013
MfeI	CAATTG	2 cut(s)	71, 339
MflI	RGATCY	1 cut(s)	217
MluCI	AATT	8 cut(s)	71, 130, 224, 237, 339, 472, 513, 978
MlyI	GAGTC	2 cut(s)	163, 293
MmeI	TCCRAC	1 cut(s)	694
MnlI	CCTC	9 cut(s)	13, 16, 25, 30, 267, 532, 553, 644, 876
Mph1103I	ATGCAT	1 cut(s)	95
MseI	TTAA	5 cut(s)	240, 539, 977, 981, 1066
MspA1I	CMGCKG	2 cut(s)	143, 486
MspI	CCGG	4 cut(s)	299, 422, 770, 778
MspR9I	CCNGG	6 cut(s)	299, 349, 591, 770, 778, 779
MunI	CAATTG	2 cut(s)	71, 339
MvaI	CCWGG	2 cut(s)	349, 591
MvnI	CGCG	1 cut(s)	143
MwoI	GCNNNNNNNGC	4 cut(s)	123, 451, 483, 868
NciI	CCSGG	4 cut(s)	299, 770, 778, 779
NcoI	CCATGG	1 cut(s)	197
NdeII	GATC	4 cut(s)	217, 262, 354, 913
NlaIII	CATG	2 cut(s)	201, 630
NlaIV	GGNNCC	6 cut(s)	308, 346, 632, 782, 783, 894
NmuCI	GTSAC	1 cut(s)	772
NsiI	ATGCAT	1 cut(s)	95
PacI	TTAATTAA	1 cut(s)	981
PfeI	GAWTC	2 cut(s)	418, 830
PkrI	GCNGC	4 cut(s)	142, 364, 488, 864
PleI	GAGTC	2 cut(s)	163, 292
PpsI	GAGTC	2 cut(s)	163, 292
PpuMI	RGGWCCY	1 cut(s)	781
PshAI	GACNNNNGTC	1 cut(s)	779
PshBI	ATTAAT	2 cut(s)	240, 977
Psp1406I	AACGTT	1 cut(s)	536
Psp5II	RGGWCCY	1 cut(s)	781
Psp6I	CCWGG	2 cut(s)	347, 589
PspEI	GGTNACC	1 cut(s)	772
PspGI	CCWGG	2 cut(s)	347, 589
PspN4I	GGNNCC	6 cut(s)	308, 346, 632, 782, 783, 894
PspPI	GGNCC	4 cut(s)	296, 630, 767, 781
PspPPI	RGGWCCY	1 cut(s)	781
PstNI	CAGNNNCTG	1 cut(s)	874
PsuI	RGATCY	1 cut(s)	217
RsaI	GTAC	2 cut(s)	394, 943
RsaNI	GTAC	2 cut(s)	393, 942
SacII	CCGCGG	1 cut(s)	144
SaqAI	TTAA	5 cut(s)	240, 539, 977, 981, 1066
SatI	GCNGC	4 cut(s)	141, 363, 487, 863
Sau3AI	GATC	4 cut(s)	217, 262, 354, 913
Sau96I	GGNCC	4 cut(s)	296, 630, 767, 781
ScaI	AGTACT	1 cut(s)	943
SchI	GAGTC	2 cut(s)	163, 293
ScrFI	CCNGG	6 cut(s)	299, 349, 591, 770, 778, 779
SfaNI	GCATC	6 cut(s)	165, 432, 724, 750, 845, 1015
SfcI	CTRYAG	2 cut(s)	551, 708
Sfr303I	CCGCGG	1 cut(s)	144
SgrBI	CCGCGG	1 cut(s)	144
SinI	GGWCC	2 cut(s)	630, 781
SmaI	CCCGGG	1 cut(s)	779
SmlI	CTYRAG	1 cut(s)	729
SmoI	CTYRAG	1 cut(s)	729
Sse9I	AATT	8 cut(s)	71, 130, 224, 237, 339, 472, 513, 978
SsiI	CCGC	6 cut(s)	141, 143, 183, 486, 530, 863
SspI	AATATT	1 cut(s)	244
SspMI	CTAG	2 cut(s)	275, 821
StyD4I	CCNGG	6 cut(s)	297, 347, 589, 768, 776, 777
StyI	CCWWGG	3 cut(s)	197, 738, 907
TaaI	ACNGT	4 cut(s)	392, 400, 857, 1034
TaiI	ACGT	1 cut(s)	539
TaqI	TCGA	1 cut(s)	44
TasI	AATT	8 cut(s)	71, 130, 224, 237, 339, 472, 513, 978
TatI	WGTACW	1 cut(s)	941
TauI	GCSGC	3 cut(s)	143, 489, 865
TfiI	GAWTC	2 cut(s)	418, 830
Tru1I	TTAA	5 cut(s)	240, 539, 977, 981, 1066
Tru9I	TTAA	5 cut(s)	240, 539, 977, 981, 1066
TscAI	CASTG	1 cut(s)	403
TseFI	GTSAC	1 cut(s)	772
TseI	GCWGC	1 cut(s)	362
Tsp45I	GTSAC	1 cut(s)	772
TspDTI	ATGAA	1 cut(s)	999
TspMI	CCCGGG	1 cut(s)	777
TspRI	CASTG	1 cut(s)	403
VpaK11BI	GGWCC	2 cut(s)	630, 781
VspI	ATTAAT	2 cut(s)	240, 977
XapI	RAATTY	1 cut(s)	224
XbaI	TCTAGA	1 cut(s)	274
XcmI	CCANNNNNNNNNTGG	1 cut(s)	195
XmaI	CCCGGG	1 cut(s)	777
XmiI	GTMKAC	1 cut(s)	458
XspI	CTAG	2 cut(s)	275, 821
ZrmI	AGTACT	1 cut(s)	943
Zsp2I	ATGCAT	1 cut(s)	95

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.