FvH4_6g22332

F-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000142
Physical Location & Seq
Forward (+)
15984607 .. 15986967
2361 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g22332.t1

Sequence Viewer

Length: 1497 bp
ATGAGTCATAAAACACAACAGCAGGTGGATGACGACGACAGGTGGTCGAAGCACCTTCCTGATGAAGTGATCGAGATGACTGTGAAGCGTCTAACCTTAGTCGATTCAATCAGATTCGCTGCTGTTTGTCCTTCTTGGAGAAGAGTATCGTCACAATGGATTCAACGAGTAACCCGACTTCCATGGCTCTTGAAAACGGTTGAGTTTCTAGACTCAGAAACTGTGAATTATAGTCTCTACAGTCTCTACAGTTCAAGTGAAGACATAGCCTACGACCTCAAGTTTCCAAGAGAAAGCGCCTGTAGTGATGACATACTCTGCTCCGGCTCTACTAATGGCTGGTTGATAATGTCTGAATATTGTATTAAACCGATAAAGTGCACCAATTATTTGTTGAACCCAATAACAGGTGATCGTATTAAGCTTCCCCAGGTGACCGGATTCATCCCACATGTGTCCACGGCCTCTTCAGATCCAAGATCTCCTGATTGCATTGTCGCAACTAAGAACCGGTTAGGGTTCATCTTTTGCAGGCCAGGTAGTCAACGCTGGAGTAGGAAGACAGCGACAGCGAAACCAGAGCTTGATAGGATGGATTACATGAAATTTCACGAGGATGGTAAGTTATACGTAATAGGACGGGATTGTGATCGGGATGATGATAAAGTGGCCTGGGATTGGGGGGATTATTATCTTCTAGTTTTTGTTCCTCTTCTTGTTGGCAAAGACGAGGAAATTACTTGGGACAAGCAAAGGGTGATAAAATTAGCCCCCCGCAAGCCTTGGACCGGTGTGGAGTCAATAACCGAACCGTGGCTGTCGTTCGCGGGTCCAGCATTTACCTTGTCCTCCAAAGGTAAGCTTTTGCTATTTTGGAAGCGGAACTACCTTCACAAGCCCGACCCACCCGTCTTTCCATTTCATGTGGTAAAGATCGATGATGGCTGGCCAGGCTGGGAGAACTCGATGGATTTTCATGTGGTAAAGAAAGATAATATTTGGGCAGCGTATGATGCTTCTGACAATGAACTAGTCTTGATATCTCATTATAGCTGCATCTCAGTGCCAAAGTCCAATAAGTCGTTTACGTGTCCAACCATAGACGAGCGCTTTTTTAGTTTTCTTTGCGGAAAACTCAACACCTTGTGTTGGGACACTACAGAAAATGGTCTGTTGGATAATAATGAAGATGGCCGATGGTTTACGCCCAACATAGCCAAACCCAGTTTGGCACAGCTTTTAAGACCTGGTCCAAAAGCGATTCTAGTGTCGAGCATATTTGGTAAACTCCTTGATTGTTTGTTGCTTTTGGCAAGGGAGACATCTGGTGTCTACTCGAGGATGTGTCTACCCGGGTTGTCTGTGGACAGGTGTCAGCGTGCTGTTGTGACACTTATTGACGGCGTCTATATCTCGTTAGCTAAGAGAGAGGGTAAATACAGGAATGTATTTGGGGGTGTGGGTAAGTTTGTTGAGGTAGATACGGGTATAGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

499

Amino Acids

56.76

Weight (kDa)

7.45

Isoelectric Point (pI)

38.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 82 - 359 1.3e-17 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000142)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 13
AasI GACNNNNNNGTC 1 cut(s) 908
Acc36I ACCTGC 1 cut(s) 13
AccI GTMKAC 2 cut(s) 1332, 1348
AccII CGCG 1 cut(s) 827
AciI CCGC 4 cut(s) 775, 827, 880, 1128
AclWI GGATC 1 cut(s) 467
AcoI YGGCCR 2 cut(s) 947, 1192
AcsI RAATTY 1 cut(s) 605
AcuI CTGAAG 1 cut(s) 453
AcyI GRCGYC 1 cut(s) 1404
AdeI CACNNNGTG 1 cut(s) 1146
AfeI AGCGCT 1 cut(s) 1109
AfiI CCNNNNNNNGG 5 cut(s) 407, 678, 788, 813, 1149
AflIII ACRYGT 2 cut(s) 451, 1088
AgeI ACCGGT 2 cut(s) 510, 788
AgsI TTSAA 5 cut(s) 108, 164, 193, 255, 397
AhdI GACNNNNNGTC 1 cut(s) 43
AhlI ACTAGT 1 cut(s) 1030
AjnI CCWGG 5 cut(s) 429, 535, 671, 949, 1246
AluBI AGCT 6 cut(s) 424, 583, 862, 1053, 1237, 1421
AluI AGCT 6 cut(s) 424, 583, 862, 1053, 1237, 1421
Alw21I GWGCWC 1 cut(s) 383
Alw26I GTCTC 3 cut(s) 239, 248, 1313
Alw44I GTGCAC 1 cut(s) 379
AlwI GGATC 1 cut(s) 467
AlwNI CAGNNNCTG 1 cut(s) 221
Ama87I CYCGRG 2 cut(s) 1336, 1352
Aor51HI AGCGCT 1 cut(s) 1109
AoxI GGCC 5 cut(s) 462, 533, 669, 947, 1192
ApaLI GTGCAC 1 cut(s) 379
ApeKI GCWGC 3 cut(s) 119, 1004, 1053
ApoI RAATTY 1 cut(s) 605
AsiGI ACCGGT 2 cut(s) 510, 788
AspLEI GCGC 2 cut(s) 299, 1110
AspS9I GGNCC 3 cut(s) 786, 830, 1250
AsuC2I CCSGG 2 cut(s) 1353, 1354
AsuHPI GGTGA 3 cut(s) 422, 445, 769
AvaI CYCGRG 2 cut(s) 1336, 1352
AvaII GGWCC 3 cut(s) 786, 830, 1250
BaeGI GKGCMC 1 cut(s) 383
BalI TGGCCA 1 cut(s) 949
BarI GAAGNNNNNNTAC 4 cut(s) 162, 194, 869, 901
BauI CACGAG 1 cut(s) 611
BbsI GAAGAC 2 cut(s) 267, 566
Bbv12I GWGCWC 1 cut(s) 383
BbvI GCAGC 3 cut(s) 106, 1016, 1040
BccI CCATC 6 cut(s) 586, 611, 935, 961, 1184, 1191
BceAI ACGGC 2 cut(s) 477, 1417
BciT130I CCWGG 5 cut(s) 431, 537, 673, 951, 1248
BcnI CCSGG 2 cut(s) 1353, 1354
BcoDI GTCTC 3 cut(s) 239, 248, 1313
BcuI ACTAGT 1 cut(s) 1030
BfaI CTAG 4 cut(s) 209, 698, 1031, 1265
BfmI CTRYAG 4 cut(s) 238, 247, 301, 1158
BfoI RGCGCY 2 cut(s) 300, 1111
BfuAI ACCTGC 1 cut(s) 13
BglII AGATCT 1 cut(s) 479
BisI GCNGC 3 cut(s) 120, 1005, 1054
BlsI GCNGC 3 cut(s) 121, 1006, 1055
Bme1390I CCNGG 7 cut(s) 431, 537, 673, 951, 1248, 1353, 1354
Bme18I GGWCC 3 cut(s) 786, 830, 1250
BmeRI GACNNNNNGTC 1 cut(s) 43
BmeT110I CYCGRG 2 cut(s) 1336, 1352
BmgT120I GGNCC 3 cut(s) 786, 830, 1250
BmiI GGNNCC 1 cut(s) 831
BmrFI CCNGG 7 cut(s) 431, 537, 673, 951, 1248, 1353, 1354
BmrI ACTGGG 1 cut(s) 1218
BmsI GCATC 2 cut(s) 1003, 1065
BmuI ACTGGG 1 cut(s) 1218
BoxI GACNNNNGTC 1 cut(s) 1371
BpiI GAAGAC 2 cut(s) 267, 566
BpmI CTGGAG 1 cut(s) 571
BpuEI CTTGAG 1 cut(s) 263
BpuMI CCSGG 2 cut(s) 1353, 1354
Bsa29I ATCGAT 1 cut(s) 936
BsaAI YACGTR 2 cut(s) 631, 1089
BsaBI GATNNNNATC 2 cut(s) 648, 690
BsaHI GRCGYC 1 cut(s) 1404
BsaJI CCNNGG 7 cut(s) 182, 429, 459, 672, 782, 812, 1352
BsaWI WCCGGW 3 cut(s) 437, 510, 788
Bsc4I CCNNNNNNNGG 5 cut(s) 407, 678, 788, 813, 1149
Bse118I RCCGGY 2 cut(s) 510, 788
Bse1I ACTGG 1 cut(s) 1224
Bse8I GATNNNNATC 2 cut(s) 648, 690
BseBI CCWGG 5 cut(s) 431, 537, 673, 951, 1248
BseCI ATCGAT 1 cut(s) 936
BseDI CCNNGG 7 cut(s) 182, 429, 459, 672, 782, 812, 1352
BseGI GGATG 6 cut(s) 34, 444, 597, 622, 661, 1347
BseJI GATNNNNATC 2 cut(s) 648, 690
BseLI CCNNNNNNNGG 5 cut(s) 407, 678, 788, 813, 1149
BseMII CTCAG 2 cut(s) 228, 1074
BseNI ACTGG 1 cut(s) 1224
BseSI GKGCMC 1 cut(s) 383
BseXI GCAGC 3 cut(s) 106, 1016, 1040
BseYI CCCAGC 1 cut(s) 954
Bsh1236I CGCG 1 cut(s) 827
BshFI GGCC 5 cut(s) 464, 535, 671, 949, 1194
BshTI ACCGGT 2 cut(s) 510, 788
BshVI ATCGAT 1 cut(s) 936
BsiHKAI GWGCWC 1 cut(s) 383
BsiHKCI CYCGRG 2 cut(s) 1336, 1352
BsiSI CCGG 5 cut(s) 324, 438, 511, 789, 1353
BslFI GGGAC 2 cut(s) 758, 1166
BslI CCNNNNNNNGG 5 cut(s) 407, 678, 788, 813, 1149
BsmAI GTCTC 3 cut(s) 239, 248, 1313
BsmFI GGGAC 2 cut(s) 758, 1166
BsnI GGCC 5 cut(s) 464, 535, 671, 949, 1194
BsoBI CYCGRG 2 cut(s) 1336, 1352
Bsp1286I GDGCHC 1 cut(s) 383
Bsp143I GATC 6 cut(s) 69, 412, 472, 479, 649, 933
Bsp19I CCATGG 1 cut(s) 182
BspACI CCGC 4 cut(s) 775, 827, 880, 1128
BspANI GGCC 5 cut(s) 464, 535, 671, 949, 1194
BspCNI CTCAG 2 cut(s) 227, 1073
BspDI ATCGAT 1 cut(s) 936
BspFNI CGCG 1 cut(s) 827
BspLI GGNNCC 1 cut(s) 831
BspMI ACCTGC 1 cut(s) 13
BspPI GGATC 1 cut(s) 467
BsrFI RCCGGY 2 cut(s) 510, 788
BsrI ACTGG 1 cut(s) 1224
BssAI RCCGGY 2 cut(s) 510, 788
BssECI CCNNGG 7 cut(s) 182, 429, 459, 672, 782, 812, 1352
BssMI GATC 6 cut(s) 69, 412, 472, 479, 649, 933
BssNI GRCGYC 1 cut(s) 1404
BssSI CACGAG 1 cut(s) 611
BssT1I CCWWGG 2 cut(s) 182, 782
Bst2BI CACGAG 1 cut(s) 611
Bst2UI CCWGG 5 cut(s) 431, 537, 673, 951, 1248
Bst4CI ACNGT 6 cut(s) 82, 199, 223, 242, 251, 813
Bst6I CTCTTC 3 cut(s) 136, 472, 717
BstACI GRCGYC 1 cut(s) 1404
BstBAI YACGTR 2 cut(s) 631, 1089
BstC8I GCNNGC 4 cut(s) 533, 779, 947, 1380
BstDEI CTNAG 5 cut(s) 97, 214, 504, 1060, 1422
BstDSI CCRYGG 3 cut(s) 182, 459, 812
BstEII GGTNACC 1 cut(s) 433
BstF5I GGATG 6 cut(s) 34, 444, 597, 622, 661, 1347
BstFNI CGCG 1 cut(s) 827
BstH2I RGCGCY 2 cut(s) 300, 1111
BstHHI GCGC 2 cut(s) 299, 1110
BstKTI GATC 6 cut(s) 72, 415, 475, 482, 652, 936
BstMAI GTCTC 3 cut(s) 239, 248, 1313
BstMBI GATC 6 cut(s) 69, 412, 472, 479, 649, 933
BstMWI GCNNNNNNNGC 3 cut(s) 833, 951, 1013
BstNI CCWGG 5 cut(s) 431, 537, 673, 951, 1248
BstNSI RCATGY 1 cut(s) 455
BstPAI GACNNNNGTC 1 cut(s) 1371
BstPI GGTNACC 1 cut(s) 433
BstSCI CCNGG 7 cut(s) 429, 535, 671, 949, 1246, 1351, 1352
BstSFI CTRYAG 4 cut(s) 238, 247, 301, 1158
BstSLI GKGCMC 1 cut(s) 383
BstSNI TACGTA 1 cut(s) 631
BstUI CGCG 1 cut(s) 827
BstV1I GCAGC 3 cut(s) 106, 1016, 1040
BstV2I GAAGAC 2 cut(s) 267, 566
BstX2I RGATCY 2 cut(s) 472, 479
BstYI RGATCY 2 cut(s) 472, 479
Bsu15I ATCGAT 1 cut(s) 936
BsuRI GGCC 5 cut(s) 464, 535, 671, 949, 1194
BsuTUI ATCGAT 1 cut(s) 936
BtgI CCRYGG 3 cut(s) 182, 459, 812
BtsCI GGATG 6 cut(s) 34, 444, 597, 622, 661, 1347
BtsIMutI CAGTG 1 cut(s) 1068
BveI ACCTGC 1 cut(s) 13
Cac8I GCNNGC 4 cut(s) 533, 779, 947, 1380
CaiI CAGNNNCTG 1 cut(s) 221
CfoI GCGC 2 cut(s) 299, 1110
Cfr10I RCCGGY 2 cut(s) 510, 788
Cfr13I GGNCC 3 cut(s) 786, 830, 1250
Cfr9I CCCGGG 1 cut(s) 1352
ClaI ATCGAT 1 cut(s) 936
CseI GACGC 2 cut(s) 77, 1393
CsiI ACCWGGT 1 cut(s) 1246
CspAI ACCGGT 2 cut(s) 510, 788
CviAII CATG 5 cut(s) 183, 452, 601, 923, 977
DdeI CTNAG 5 cut(s) 97, 214, 504, 1060, 1422
DpnI GATC 6 cut(s) 71, 414, 474, 481, 651, 935
DpnII GATC 6 cut(s) 69, 412, 472, 479, 649, 933
DraIII CACNNNGTG 1 cut(s) 1146
DrdI GACNNNNNNGTC 1 cut(s) 908
DriI GACNNNNNGTC 1 cut(s) 43
DseDI GACNNNNNNGTC 1 cut(s) 908
EaeI YGGCCR 2 cut(s) 947, 1192
Eam1104I CTCTTC 3 cut(s) 136, 472, 717
Eam1105I GACNNNNNGTC 1 cut(s) 43
EarI CTCTTC 3 cut(s) 136, 472, 717
Eco105I TACGTA 1 cut(s) 631
Eco130I CCWWGG 2 cut(s) 182, 782
Eco32I GATATC 1 cut(s) 1041
Eco47I GGWCC 3 cut(s) 786, 830, 1250
Eco47III AGCGCT 1 cut(s) 1109
Eco57I CTGAAG 1 cut(s) 453
Eco88I CYCGRG 2 cut(s) 1336, 1352
Eco91I GGTNACC 1 cut(s) 433
EcoO65I GGTNACC 1 cut(s) 433
EcoRII CCWGG 5 cut(s) 429, 535, 671, 949, 1246
EcoRV GATATC 1 cut(s) 1041
EcoT14I CCWWGG 2 cut(s) 182, 782
ErhI CCWWGG 2 cut(s) 182, 782
FaeI CATG 5 cut(s) 186, 455, 604, 926, 980
FalI AAGNNNNNCTT 2 cut(s) 846, 878
FaqI GGGAC 2 cut(s) 758, 1166
FatI CATG 5 cut(s) 182, 451, 600, 922, 976
FauI CCCGC 2 cut(s) 782, 820
FblI GTMKAC 2 cut(s) 1332, 1348
Fnu4HI GCNGC 3 cut(s) 120, 1005, 1054
FokI GGATG 6 cut(s) 41, 431, 604, 629, 668, 1354
Fsp4HI GCNGC 3 cut(s) 120, 1005, 1054
FspBI CTAG 4 cut(s) 209, 698, 1031, 1265
GlaI GCGC 2 cut(s) 298, 1109
GluI GCNGC 3 cut(s) 120, 1005, 1054
GsaI CCCAGC 1 cut(s) 958
GsuI CTGGAG 1 cut(s) 571
HaeII RGCGCY 2 cut(s) 300, 1111
HaeIII GGCC 5 cut(s) 464, 535, 671, 949, 1194
HapII CCGG 5 cut(s) 324, 438, 511, 789, 1353
HgaI GACGC 2 cut(s) 77, 1393
HhaI GCGC 2 cut(s) 299, 1110
Hin1I GRCGYC 1 cut(s) 1404
Hin1II CATG 5 cut(s) 186, 455, 604, 926, 980
Hin6I GCGC 2 cut(s) 297, 1108
HinP1I GCGC 2 cut(s) 297, 1108
HincII GTYRAC 1 cut(s) 545
HindII GTYRAC 1 cut(s) 545
HindIII AAGCTT 2 cut(s) 422, 860
HinfI GANTC 8 cut(s) 4, 104, 114, 160, 212, 441, 797, 1261
HpaII CCGG 5 cut(s) 324, 438, 511, 789, 1353
HphI GGTGA 3 cut(s) 422, 445, 769
Hpy166II GTNNAC 9 cut(s) 381, 459, 545, 1086, 1203, 1286, 1333, 1349, 1366
Hpy188I TCNGA 5 cut(s) 113, 217, 355, 472, 1021
Hpy188III TCNNGA 8 cut(s) 59, 73, 190, 209, 485, 611, 653, 1036
Hpy8I GTNNAC 9 cut(s) 381, 459, 545, 1086, 1203, 1286, 1333, 1349, 1366
Hpy99I CGWCG 1 cut(s) 38
HpyAV CCTTC 3 cut(s) 65, 141, 899
HpyCH4III ACNGT 6 cut(s) 82, 199, 223, 242, 251, 813
HpyCH4IV ACGT 2 cut(s) 630, 1088
HpyCH4V TGCA 4 cut(s) 381, 492, 531, 1056
HpyF10VI GCNNNNNNNGC 3 cut(s) 833, 951, 1013
HpyF3I CTNAG 5 cut(s) 97, 214, 504, 1060, 1422
HpySE526I ACGT 2 cut(s) 630, 1088
Hsp92I GRCGYC 1 cut(s) 1404
Hsp92II CATG 5 cut(s) 186, 455, 604, 926, 980
HspAI GCGC 2 cut(s) 297, 1108
Kzo9I GATC 6 cut(s) 69, 412, 472, 479, 649, 933
LmnI GCTCC 1 cut(s) 326
Lsp1109I GCAGC 3 cut(s) 106, 1016, 1040
LweI GCATC 2 cut(s) 1003, 1065
MabI ACCWGGT 1 cut(s) 1246
MaeI CTAG 4 cut(s) 209, 698, 1031, 1265
MaeII ACGT 2 cut(s) 630, 1088
MaeIII GTNAC 4 cut(s) 150, 169, 433, 1387
MalI GATC 6 cut(s) 71, 414, 474, 481, 651, 935
MboI GATC 6 cut(s) 69, 412, 472, 479, 649, 933
MboII GAAGA 7 cut(s) 153, 272, 459, 571, 686, 704, 1199
MflI RGATCY 2 cut(s) 472, 479
MhlI GDGCHC 1 cut(s) 383
MlsI TGGCCA 1 cut(s) 949
MluCI AATT 5 cut(s) 226, 385, 605, 735, 764
MluNI TGGCCA 1 cut(s) 949
MlyI GAGTC 3 cut(s) 13, 206, 806
MmeI TCCRAC 2 cut(s) 1118, 1155
MnlI CCTC 9 cut(s) 287, 475, 607, 720, 724, 859, 1332, 1423, 1468
Mox20I TGGCCA 1 cut(s) 949
MscI TGGCCA 1 cut(s) 949
MseI TTAA 3 cut(s) 366, 420, 1241
MslI CAYNNNNRTG 2 cut(s) 615, 1061
Msp20I TGGCCA 1 cut(s) 949
MspI CCGG 5 cut(s) 324, 438, 511, 789, 1353
MspR9I CCNGG 7 cut(s) 431, 537, 673, 951, 1248, 1353, 1354
MvaI CCWGG 5 cut(s) 431, 537, 673, 951, 1248
MvnI CGCG 1 cut(s) 827
MwoI GCNNNNNNNGC 3 cut(s) 833, 951, 1013
NciI CCSGG 2 cut(s) 1353, 1354
NcoI CCATGG 1 cut(s) 182
NdeII GATC 6 cut(s) 69, 412, 472, 479, 649, 933
NlaIII CATG 5 cut(s) 186, 455, 604, 926, 980
NlaIV GGNNCC 1 cut(s) 831
NmuCI GTSAC 3 cut(s) 150, 433, 1387
NspI RCATGY 1 cut(s) 455
PaeR7I CTCGAG 1 cut(s) 1336
PaqCI CACCTGC 1 cut(s) 13
PciI ACATGT 1 cut(s) 451
PcsI WCGNNNNNNNCGW 1 cut(s) 172
PfeI GAWTC 5 cut(s) 104, 114, 160, 441, 1261
PflFI GACNNNGTC 2 cut(s) 1248, 1403
PinAI ACCGGT 2 cut(s) 510, 788
PkrI GCNGC 3 cut(s) 121, 1006, 1055
PleI GAGTC 3 cut(s) 12, 206, 805
PpsI GAGTC 3 cut(s) 12, 206, 805
Ppu21I YACGTR 2 cut(s) 631, 1089
PscI ACATGT 1 cut(s) 451
PshAI GACNNNNGTC 1 cut(s) 1371
Psp6I CCWGG 5 cut(s) 429, 535, 671, 949, 1246
PspEI GGTNACC 1 cut(s) 433
PspFI CCCAGC 1 cut(s) 954
PspGI CCWGG 5 cut(s) 429, 535, 671, 949, 1246
PspN4I GGNNCC 1 cut(s) 831
PspPI GGNCC 3 cut(s) 786, 830, 1250
PspXI VCTCGAGB 1 cut(s) 1336
PstNI CAGNNNCTG 1 cut(s) 221
PsuI RGATCY 2 cut(s) 472, 479
PsyI GACNNNGTC 2 cut(s) 1248, 1403
RseI CAYNNNNRTG 2 cut(s) 615, 1061
SaqAI TTAA 3 cut(s) 366, 420, 1241
SatI GCNGC 3 cut(s) 120, 1005, 1054
Sau3AI GATC 6 cut(s) 69, 412, 472, 479, 649, 933
Sau96I GGNCC 3 cut(s) 786, 830, 1250
SchI GAGTC 3 cut(s) 13, 206, 806
ScrFI CCNGG 7 cut(s) 431, 537, 673, 951, 1248, 1353, 1354
SduI GDGCHC 1 cut(s) 383
SexAI ACCWGGT 1 cut(s) 1246
SfaNI GCATC 2 cut(s) 1003, 1065
SfcI CTRYAG 4 cut(s) 238, 247, 301, 1158
Sfr274I CTCGAG 1 cut(s) 1336
SinI GGWCC 3 cut(s) 786, 830, 1250
SlaI CTCGAG 1 cut(s) 1336
SmaI CCCGGG 1 cut(s) 1354
SmiMI CAYNNNNRTG 2 cut(s) 615, 1061
SmlI CTYRAG 2 cut(s) 278, 1336
SmoI CTYRAG 2 cut(s) 278, 1336
SnaBI TACGTA 1 cut(s) 631
SpeI ACTAGT 1 cut(s) 1030
Sse9I AATT 5 cut(s) 226, 385, 605, 735, 764
SsiI CCGC 4 cut(s) 775, 827, 880, 1128
SspI AATATT 2 cut(s) 359, 997
SspMI CTAG 4 cut(s) 209, 698, 1031, 1265
StyD4I CCNGG 7 cut(s) 429, 535, 671, 949, 1246, 1351, 1352
StyI CCWWGG 2 cut(s) 182, 782
TaaI ACNGT 6 cut(s) 82, 199, 223, 242, 251, 813
TaiI ACGT 2 cut(s) 633, 1091
TaqI TCGA 7 cut(s) 47, 72, 102, 936, 965, 1271, 1337
TasI AATT 5 cut(s) 226, 385, 605, 735, 764
TfiI GAWTC 5 cut(s) 104, 114, 160, 441, 1261
Tru1I TTAA 3 cut(s) 366, 420, 1241
Tru9I TTAA 3 cut(s) 366, 420, 1241
TscAI CASTG 1 cut(s) 1068
TseFI GTSAC 3 cut(s) 150, 433, 1387
TseI GCWGC 3 cut(s) 119, 1004, 1053
Tsp45I GTSAC 3 cut(s) 150, 433, 1387
TspDTI ATGAA 8 cut(s) 78, 433, 511, 617, 911, 965, 1041, 1200
TspMI CCCGGG 1 cut(s) 1352
TspRI CASTG 1 cut(s) 1068
Tth111I GACNNNGTC 2 cut(s) 1248, 1403
VneI GTGCAC 1 cut(s) 379
VpaK11BI GGWCC 3 cut(s) 786, 830, 1250
XapI RAATTY 1 cut(s) 605
XbaI TCTAGA 1 cut(s) 208
XceI RCATGY 1 cut(s) 455
XcmI CCANNNNNNNNNTGG 1 cut(s) 1225
XhoI CTCGAG 1 cut(s) 1336
XmaI CCCGGG 1 cut(s) 1352
XmiI GTMKAC 2 cut(s) 1332, 1348
XspI CTAG 4 cut(s) 209, 698, 1031, 1265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.