Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0000142

Physical Location & Seq

Genomic Coordinates Forward (+)

19781001 .. 19782134

Gene Structure 1134 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG115300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1134 bp

ATGCAACTGATTCTGCACCGACTGCCCCTGTCAGACTATCTTAATTTTCGTGACGTAAGCCCTTGTTGGCGAGCCGCAATTGAAAGCAAGCGTTGGCTTCCTCCTGCTCATCAACTCCCATGGCTTTTGCACGGTTCTAGCCATTCAATAACATACATGAAAACATTCTACATTAAAACAGATGATGACTACTTGTTTGTAAGCGATCGGAAAATTTGCACATCAAAAAACAATGTCACAGATTATCTTTGGAATTGTTTTGGATCAATTGAGGGATGGTTGATCATGGGTACTATAAGAATTAATATGACAAATGCTAAAAGCTTCTTCTTCTTGAATCCAGTATCAGGTGCTCAAGTTATGCTCCCATCACATTCCGCCCCCGAGTTCTTCGACTGCTTCCTGAAAGTAAAACTAGTAGCCTCTTCAGTACCAACCACAACAAAGTTGCAGCCGCAGCAGCGGAGCTGTTATGTGACTTGCCTTCACCTTCAAGAAGAAGGTCTTTTGGCCTTTTGCACGCCCACTGATAAATCATGGACCTTCATTGAGGCCGAGAAAGCTCTACAATTTTCGGATGTAGAAATAATTGATGGGAAATTATATGCGGTAGGTACCCACGTATTAGAGCTTGTGATGGTGATTGACATCCATTTAGATTCCCATGATAACAGACTTCATACCTACACATCAAAGATGTTGGTTACTCTTCACCCCAACGTTAAGAGCATAGTTGACACCGGACTCTACCATCGGGATTGTTACTTAGCAAAATGTTCTGAATCAAAGGAGTTGTTTATGATTTTGTATCAGGGTCCTATTTATGGAAAGACGGAAGGATTTCAAGTGTTGAAGTTGGAGTATAATGGTACTACCAGTCCTCAGTGGGTAGAGATTGTTGACCTTGGTGATCGGGCAATTTTTTTGGGCGGGATCAGCAGCAAAATTGTCACTTCTCATGATAAAACAGTTGAAAGAAACTGTATCTATTTTGTTTTCGATGGGTTGTATACAAATTACGAATCTGGAGTGTTTTCCATGACAAATAGGAGCATCAAACCTTTGACTTTTCCCAAGCATCATTGCCGTGGAAAGCTGAATGAGACTCTTTGGTTCACACCAAATCCTTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030684 GO:0030686 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904 GO:2000232

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT_2 Pescadillo_N

Protein Analysis

377

Amino Acids

43.29

Weight (kDa)

6.93

Isoelectric Point (pI)

37.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	85 - 345	6.4e-36	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000142)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica	MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica	Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis	pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis	RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata	RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora	Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa	Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha	Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana	Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	614
AccB1I	GGYRCC	1 cut(s)	614
AccI	GTMKAC	1 cut(s)	1010
AciI	CCGC	6 cut(s)	75, 378, 455, 463, 608, 930
AclI	AACGTT	1 cut(s)	720
AclWI	GGATC	2 cut(s)	271, 941
AcsI	RAATTY	1 cut(s)	213
AcuI	CTGAAG	1 cut(s)	411
AfaI	GTAC	4 cut(s)	292, 432, 616, 871
AfiI	CCNNNNNNNGG	2 cut(s)	347, 824
AgsI	TTSAA	7 cut(s)	83, 147, 337, 494, 845, 853, 974
AhlI	ACTAGT	1 cut(s)	415
AluBI	AGCT	5 cut(s)	324, 468, 563, 631, 1096
AluI	AGCT	5 cut(s)	324, 468, 563, 631, 1096
Alw21I	GWGCWC	1 cut(s)	355
Alw26I	GTCTC	1 cut(s)	1097
AlwI	GGATC	2 cut(s)	271, 941
Ama87I	CYCGRG	1 cut(s)	383
AoxI	GGCC	2 cut(s)	510, 552
ApeKI	GCWGC	4 cut(s)	451, 457, 460, 939
ApoI	RAATTY	1 cut(s)	213
ArsI	GACNNNNNNTTYG	2 cut(s)	179, 211
AseI	ATTAAT	1 cut(s)	303
Asp700I	GAANNNNTTC	2 cut(s)	164, 840
Asp718I	GGTACC	1 cut(s)	614
AspS9I	GGNCC	2 cut(s)	540, 815
AsuHPI	GGTGA	4 cut(s)	479, 652, 704, 920
AvaI	CYCGRG	1 cut(s)	383
AvaII	GGWCC	2 cut(s)	540, 815
BaeI	ACNNNNGTAYC	2 cut(s)	606, 639
BanI	GGYRCC	1 cut(s)	614
Bbv12I	GWGCWC	1 cut(s)	355
BbvI	GCAGC	4 cut(s)	463, 469, 472, 951
BccI	CCATC	6 cut(s)	270, 376, 587, 631, 759, 995
BceAI	ACGGC	1 cut(s)	1071
BclI	TGATCA	1 cut(s)	282
BcoDI	GTCTC	1 cut(s)	1097
BcuI	ACTAGT	1 cut(s)	415
BfaI	CTAG	2 cut(s)	138, 416
BisI	GCNGC	6 cut(s)	75, 452, 455, 458, 461, 940
BlsI	GCNGC	6 cut(s)	76, 453, 456, 459, 462, 941
Bme18I	GGWCC	2 cut(s)	540, 815
BmeT110I	CYCGRG	1 cut(s)	383
BmgT120I	GGNCC	2 cut(s)	540, 815
BmiI	GGNNCC	2 cut(s)	616, 816
BmsI	GCATC	2 cut(s)	1062, 1087
BpmI	CTGGAG	1 cut(s)	1047
BpuEI	CTTGAG	1 cut(s)	339
BsaAI	YACGTR	1 cut(s)	622
BsaBI	GATNNNNATC	1 cut(s)	647
BsaJI	CCNNGG	4 cut(s)	119, 904, 1087, 1127
BsaWI	WCCGGW	1 cut(s)	740
Bsc4I	CCNNNNNNNGG	2 cut(s)	347, 824
Bse1I	ACTGG	2 cut(s)	341, 876
Bse3DI	GCAATG	1 cut(s)	1081
Bse8I	GATNNNNATC	1 cut(s)	647
BseDI	CCNNGG	4 cut(s)	119, 904, 1087, 1127
BseGI	GGATG	3 cut(s)	281, 583, 648
BseJI	GATNNNNATC	1 cut(s)	647
BseLI	CCNNNNNNNGG	2 cut(s)	347, 824
BseMI	GCAATG	1 cut(s)	1081
BseMII	CTCAG	1 cut(s)	896
BseNI	ACTGG	2 cut(s)	341, 876
BseXI	GCAGC	4 cut(s)	463, 469, 472, 951
Bsh1285I	CGRYCG	1 cut(s)	208
BshFI	GGCC	2 cut(s)	512, 554
BshNI	GGYRCC	1 cut(s)	614
BsiEI	CGRYCG	1 cut(s)	208
BsiHKAI	GWGCWC	1 cut(s)	355
BsiHKCI	CYCGRG	1 cut(s)	383
BsiSI	CCGG	1 cut(s)	741
BslI	CCNNNNNNNGG	2 cut(s)	347, 824
BsmAI	GTCTC	1 cut(s)	1097
BsnI	GGCC	2 cut(s)	512, 554
BsoBI	CYCGRG	1 cut(s)	383
Bsp1286I	GDGCHC	1 cut(s)	355
Bsp143I	GATC	5 cut(s)	205, 263, 282, 910, 933
Bsp19I	CCATGG	1 cut(s)	119
BspACI	CCGC	6 cut(s)	75, 378, 455, 463, 608, 930
BspANI	GGCC	2 cut(s)	512, 554
BspCNI	CTCAG	1 cut(s)	895
BspHI	TCATGA	1 cut(s)	958
BspLI	GGNNCC	2 cut(s)	616, 816
BspPI	GGATC	2 cut(s)	271, 941
BspT107I	GGYRCC	1 cut(s)	614
BsrDI	GCAATG	1 cut(s)	1081
BsrI	ACTGG	2 cut(s)	341, 876
BssECI	CCNNGG	4 cut(s)	119, 904, 1087, 1127
BssMI	GATC	5 cut(s)	205, 263, 282, 910, 933
BssNAI	GTATAC	1 cut(s)	1011
BssT1I	CCWWGG	3 cut(s)	119, 904, 1127
Bst1107I	GTATAC	1 cut(s)	1011
Bst4CI	ACNGT	3 cut(s)	134, 970, 983
Bst6I	CTCTTC	2 cut(s)	430, 714
BstAPI	GCANNNNNTGC	1 cut(s)	22
BstBAI	YACGTR	1 cut(s)	622
BstC8I	GCNNGC	3 cut(s)	72, 89, 521
BstDEI	CTNAG	2 cut(s)	766, 882
BstDSI	CCRYGG	2 cut(s)	119, 1087
BstF5I	GGATG	3 cut(s)	281, 583, 648
BstKTI	GATC	5 cut(s)	208, 266, 285, 913, 936
BstMAI	GTCTC	1 cut(s)	1097
BstMBI	GATC	5 cut(s)	205, 263, 282, 910, 933
BstMCI	CGRYCG	1 cut(s)	208
BstMWI	GCNNNNNNNGC	5 cut(s)	22, 457, 460, 560, 936
BstV1I	GCAGC	4 cut(s)	463, 469, 472, 951
BstXI	CCANNNNNNTGG	1 cut(s)	1128
BstZ17I	GTATAC	1 cut(s)	1011
BsuRI	GGCC	2 cut(s)	512, 554
BtgI	CCRYGG	2 cut(s)	119, 1087
BtsCI	GGATG	3 cut(s)	281, 583, 648
BtsIMutI	CAGTG	2 cut(s)	525, 890
Cac8I	GCNNGC	3 cut(s)	72, 89, 521
CciI	TCATGA	1 cut(s)	958
Cfr13I	GGNCC	2 cut(s)	540, 815
Csp6I	GTAC	4 cut(s)	291, 431, 615, 870
CviAII	CATG	7 cut(s)	120, 157, 286, 537, 665, 959, 1039
CviQI	GTAC	4 cut(s)	291, 431, 615, 870
DdeI	CTNAG	2 cut(s)	766, 882
DpnI	GATC	5 cut(s)	207, 265, 284, 912, 935
DpnII	GATC	5 cut(s)	205, 263, 282, 910, 933
Eam1104I	CTCTTC	2 cut(s)	430, 714
EarI	CTCTTC	2 cut(s)	430, 714
EciI	GGCGGA	1 cut(s)	367
Eco130I	CCWWGG	3 cut(s)	119, 904, 1127
Eco47I	GGWCC	2 cut(s)	540, 815
Eco57I	CTGAAG	1 cut(s)	411
Eco88I	CYCGRG	1 cut(s)	383
EcoO109I	RGGNCCY	1 cut(s)	815
EcoT14I	CCWWGG	3 cut(s)	119, 904, 1127
ErhI	CCWWGG	3 cut(s)	119, 904, 1127
FaeI	CATG	7 cut(s)	123, 160, 289, 540, 668, 962, 1042
FalI	AAGNNNNNCTT	2 cut(s)	489, 521
FatI	CATG	7 cut(s)	119, 156, 285, 536, 664, 958, 1038
FauI	CCCGC	1 cut(s)	923
FbaI	TGATCA	1 cut(s)	282
FblI	GTMKAC	1 cut(s)	1010
Fnu4HI	GCNGC	6 cut(s)	75, 452, 455, 458, 461, 940
FokI	GGATG	3 cut(s)	288, 590, 635
Fsp4HI	GCNGC	6 cut(s)	75, 452, 455, 458, 461, 940
FspBI	CTAG	2 cut(s)	138, 416
GluI	GCNGC	6 cut(s)	75, 452, 455, 458, 461, 940
GsuI	CTGGAG	1 cut(s)	1047
HaeIII	GGCC	2 cut(s)	512, 554
HapII	CCGG	1 cut(s)	741
Hin1II	CATG	7 cut(s)	123, 160, 289, 540, 668, 962, 1042
HincII	GTYRAC	2 cut(s)	736, 901
HindII	GTYRAC	2 cut(s)	736, 901
HindIII	AAGCTT	1 cut(s)	322
HinfI	GANTC	7 cut(s)	10, 337, 659, 744, 782, 1022, 1105
HpaII	CCGG	1 cut(s)	741
HphI	GGTGA	4 cut(s)	479, 652, 704, 920
Hpy166II	GTNNAC	4 cut(s)	736, 901, 1011, 1116
Hpy188I	TCNGA	4 cut(s)	34, 210, 577, 781
Hpy188III	TCNNGA	7 cut(s)	50, 334, 403, 494, 755, 959, 1026
Hpy8I	GTNNAC	4 cut(s)	736, 901, 1011, 1116
HpyAV	CCTTC	5 cut(s)	494, 494, 500, 553, 830
HpyCH4III	ACNGT	3 cut(s)	134, 970, 983
HpyCH4IV	ACGT	3 cut(s)	54, 621, 720
HpyCH4V	TGCA	6 cut(s)	4, 16, 130, 219, 451, 519
HpyF10VI	GCNNNNNNNGC	5 cut(s)	22, 457, 460, 560, 936
HpyF3I	CTNAG	2 cut(s)	766, 882
HpySE526I	ACGT	3 cut(s)	54, 621, 720
Hsp92II	CATG	7 cut(s)	123, 160, 289, 540, 668, 962, 1042
KpnI	GGTACC	1 cut(s)	618
Ksp22I	TGATCA	1 cut(s)	282
Kzo9I	GATC	5 cut(s)	205, 263, 282, 910, 933
LmnI	GCTCC	3 cut(s)	369, 465, 1050
LpnPI	CCDG	9 cut(s)	41, 117, 333, 354, 416, 754, 797, 889, 1011
Lsp1109I	GCAGC	4 cut(s)	463, 469, 472, 951
LweI	GCATC	2 cut(s)	1062, 1087
MaeI	CTAG	2 cut(s)	138, 416
MaeII	ACGT	3 cut(s)	54, 621, 720
MaeIII	GTNAC	6 cut(s)	50, 235, 475, 703, 761, 949
MalI	GATC	5 cut(s)	207, 265, 284, 912, 935
MboI	GATC	5 cut(s)	205, 263, 282, 910, 933
MboII	GAAGA	6 cut(s)	319, 322, 382, 417, 509, 701
MfeI	CAATTG	2 cut(s)	78, 267
MhlI	GDGCHC	1 cut(s)	355
MlyI	GAGTC	2 cut(s)	738, 1099
MmeI	TCCRAC	1 cut(s)	837
MnlI	CCTC	5 cut(s)	111, 265, 433, 544, 891
MroXI	GAANNNNTTC	2 cut(s)	164, 840
MseI	TTAA	4 cut(s)	42, 174, 303, 723
MslI	CAYNNNNRTG	1 cut(s)	1086
MspA1I	CMGCKG	1 cut(s)	463
MspI	CCGG	1 cut(s)	741
MunI	CAATTG	2 cut(s)	78, 267
MwoI	GCNNNNNNNGC	5 cut(s)	22, 457, 460, 560, 936
NcoI	CCATGG	1 cut(s)	119
NdeII	GATC	5 cut(s)	205, 263, 282, 910, 933
NlaIII	CATG	7 cut(s)	123, 160, 289, 540, 668, 962, 1042
NlaIV	GGNNCC	2 cut(s)	616, 816
NmeAIII	GCCGAG	1 cut(s)	580
NmuCI	GTSAC	4 cut(s)	50, 235, 475, 949
PagI	TCATGA	1 cut(s)	958
PdmI	GAANNNNTTC	2 cut(s)	164, 840
PfeI	GAWTC	5 cut(s)	10, 337, 659, 782, 1022
PkrI	GCNGC	6 cut(s)	76, 453, 456, 459, 462, 941
Ple19I	CGATCG	1 cut(s)	208
PleI	GAGTC	2 cut(s)	738, 1099
PpsI	GAGTC	2 cut(s)	738, 1099
Ppu21I	YACGTR	1 cut(s)	622
PpuMI	RGGWCCY	1 cut(s)	815
PshBI	ATTAAT	1 cut(s)	303
Psp1406I	AACGTT	1 cut(s)	720
Psp5II	RGGWCCY	1 cut(s)	815
PspN4I	GGNNCC	2 cut(s)	616, 816
PspPI	GGNCC	2 cut(s)	540, 815
PspPPI	RGGWCCY	1 cut(s)	815
PvuI	CGATCG	1 cut(s)	208
RsaI	GTAC	4 cut(s)	292, 432, 616, 871
RsaNI	GTAC	4 cut(s)	291, 431, 615, 870
RseI	CAYNNNNRTG	1 cut(s)	1086
SaqAI	TTAA	4 cut(s)	42, 174, 303, 723
SatI	GCNGC	6 cut(s)	75, 452, 455, 458, 461, 940
Sau3AI	GATC	5 cut(s)	205, 263, 282, 910, 933
Sau96I	GGNCC	2 cut(s)	540, 815
SchI	GAGTC	2 cut(s)	738, 1099
SduI	GDGCHC	1 cut(s)	355
SfaNI	GCATC	2 cut(s)	1062, 1087
SinI	GGWCC	2 cut(s)	540, 815
SmiMI	CAYNNNNRTG	1 cut(s)	1086
SmlI	CTYRAG	1 cut(s)	354
SmoI	CTYRAG	1 cut(s)	354
SpeI	ACTAGT	1 cut(s)	415
SsiI	CCGC	6 cut(s)	75, 378, 455, 463, 608, 930
SspMI	CTAG	2 cut(s)	138, 416
StyI	CCWWGG	3 cut(s)	119, 904, 1127
TaaI	ACNGT	3 cut(s)	134, 970, 983
TaiI	ACGT	3 cut(s)	57, 624, 723
TaqI	TCGA	2 cut(s)	393, 999
TauI	GCSGC	2 cut(s)	77, 457
TfiI	GAWTC	5 cut(s)	10, 337, 659, 782, 1022
Tru1I	TTAA	4 cut(s)	42, 174, 303, 723
Tru9I	TTAA	4 cut(s)	42, 174, 303, 723
TscAI	CASTG	2 cut(s)	532, 890
TseFI	GTSAC	4 cut(s)	50, 235, 475, 949
TseI	GCWGC	4 cut(s)	451, 457, 460, 939
Tsp45I	GTSAC	4 cut(s)	50, 235, 475, 949
TspDTI	ATGAA	3 cut(s)	173, 535, 668
TspGWI	ACGGA	1 cut(s)	848
TspRI	CASTG	2 cut(s)	532, 890
VpaK11BI	GGWCC	2 cut(s)	540, 815
VspI	ATTAAT	1 cut(s)	303
XapI	RAATTY	1 cut(s)	213
XmiI	GTMKAC	1 cut(s)	1010
XmnI	GAANNNNTTC	2 cut(s)	164, 840
XspI	CTAG	2 cut(s)	138, 416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.