Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0000142

Physical Location & Seq

Genomic Coordinates Forward (+)

15100640 .. 15101818

Gene Structure 1179 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG176900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1179 bp

ATGAAGATGATGATATCAAGAATATACTCACAGCTCACTGCTTGTTTTGGCCACTACGACGATCATGAGATGTGGAGTAGGCAAATCCCAAATGATGTCATGGGATTAGTTCTGCAACGCCTACCTCGCCCAGATTACATCCAGTGTCGTGACGTATGCCCTACCTGGCGAGACATAATTGATAGCAGCTCTGTTGCCCCTCATCACCTTCTGCCATGGCTTTTACTCGATTCCAAACATCTCTTCTTCATCAAAGACGGTTGCCTTGTTAGTGACCACCGGAAAATTTCGACACTCGTTAAGCCACGATGTGTTGGATCAATTGAGGGGTGGTTGATCATGCACGAGTATGTTAAGAAAAGCCGCTACTTCTTGAACCCGATTACAGGTGCTCGAGTCATACTTCCTTCATCAAAATGCATTGAGAAAGAGAAAGTTGTAGCCTCTTCGGTACCAACAAGGGGGGAGCACTGTTATGTGGTGAGCCTTAATTTACTTTCTGGCCGTTTGGCTTTTTGTAGGCCGACCGACCAATCATGGACTCCCATCGAAGCTTTCGAACCCGAAACTGAGAATGCTCTCGATTTTCGAGATGTAGAAATAGTTGCGGGAAAACTATATGCTGCAACTAGCAGTGCATTGGAATTTCTAATGGTGTTTGACATCAATTTGAATGGGGGTGTTCCTAGCTATACAGCTGAAAGGGTAGTTATGCATTACCCTAGTGATGGTGGGATAAAACTTGACTATAAGATGTACTTTCGGACTTGGTACCTGGTAAAGGATTTTGAATCACATGAATTGTTTCTTATTTTGCGTAACACAGCTCTAGCCCAGGTGACTGAAGGATTTCAAGTGTTGAAGTTGGAGCACTGTGATAGTGGTGGTGGTGCTCGTTGGGAGGAGATTGTTGACCTTGGTAGTCGGATATTGTTTGTGAGCATGCTTAACAATAAATGCATCTCTTCCGAGAGAGGGCTTAGCGGCTCCAATGATAAGGCGCTTGAAAGAAACTGCATTTATTTTGCTTTTGATTGGCATAGTACTGAAACATCACCTATAGTCGACTTTGGGGTGTTTTCCCTGACAAAGAGGAGCGTCAAACCCTTGAGTTGTCCTATAAATCATTTGAGCCGAGAGTTGAATCAAATTGTGTGGTTTACACCAAATCCTTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030684 GO:0030686 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904 GO:2000232

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT_2 Pescadillo_N

Protein Analysis

392

Amino Acids

44.83

Weight (kDa)

6.5

Isoelectric Point (pI)

46.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	28 - 64	2.1e-08	F-box domain
Beta-prop_KIB1-4	PF03478	98 - 360	1.6e-36	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000142)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica	MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica	Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis	pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis	RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata	RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora	Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa	Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha	Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana	Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	451, 771
AccB1I	GGYRCC	2 cut(s)	451, 771
AccI	GTMKAC	1 cut(s)	1065
AciI	CCGC	3 cut(s)	364, 608, 984
AclWI	GGATC	1 cut(s)	325
AcoI	YGGCCR	2 cut(s)	49, 502
AcsI	RAATTY	2 cut(s)	285, 644
AcuI	CTGAAG	1 cut(s)	864
AdeI	CACNNNGTG	1 cut(s)	311
AfaI	GTAC	4 cut(s)	453, 758, 773, 1045
AfiI	CCNNNNNNNGG	5 cut(s)	386, 461, 728, 781, 975
AgsI	TTSAA	7 cut(s)	376, 673, 791, 854, 862, 1007, 1144
AjnI	CCWGG	3 cut(s)	164, 774, 834
AjuI	GAANNNNNNNTTGG	2 cut(s)	227, 259
AluBI	AGCT	6 cut(s)	34, 189, 554, 690, 698, 827
AluI	AGCT	6 cut(s)	34, 189, 554, 690, 698, 827
Alw21I	GWGCWC	4 cut(s)	394, 471, 873, 895
Alw26I	GTCTC	1 cut(s)	165
AlwI	GGATC	1 cut(s)	325
Ama87I	CYCGRG	1 cut(s)	393
AoxI	GGCC	3 cut(s)	49, 502, 521
ApeKI	GCWGC	2 cut(s)	186, 623
ApoI	RAATTY	2 cut(s)	285, 644
Asp700I	GAANNNNTTC	2 cut(s)	804, 849
Asp718I	GGTACC	2 cut(s)	451, 771
AspLEI	GCGC	1 cut(s)	1003
AsuHPI	GGTGA	4 cut(s)	197, 493, 850, 1047
AsuII	TTCGAA	1 cut(s)	558
AvaI	CYCGRG	1 cut(s)	393
BalI	TGGCCA	1 cut(s)	51
BanI	GGYRCC	2 cut(s)	451, 771
BauI	CACGAG	1 cut(s)	344
Bbv12I	GWGCWC	4 cut(s)	394, 471, 873, 895
BbvI	GCAGC	2 cut(s)	198, 610
BccI	CCATC	2 cut(s)	554, 722
BceAI	ACGGC	1 cut(s)	489
BciT130I	CCWGG	3 cut(s)	166, 776, 836
BclI	TGATCA	1 cut(s)	336
BcoDI	GTCTC	1 cut(s)	165
BfaI	CTAG	4 cut(s)	630, 687, 723, 830
BfmI	CTRYAG	1 cut(s)	1059
BfoI	RGCGCY	1 cut(s)	1004
BisI	GCNGC	4 cut(s)	187, 364, 624, 985
BlpI	GCTNAGC	1 cut(s)	980
BlsI	GCNGC	4 cut(s)	188, 365, 625, 986
BmcAI	AGTACT	1 cut(s)	1045
Bme1390I	CCNGG	3 cut(s)	166, 776, 836
BmeT110I	CYCGRG	1 cut(s)	393
BmiI	GGNNCC	3 cut(s)	453, 773, 988
BmrFI	CCNGG	3 cut(s)	166, 776, 836
BmsI	GCATC	1 cut(s)	969
Bpu1102I	GCTNAGC	1 cut(s)	980
Bpu14I	TTCGAA	1 cut(s)	558
BpuEI	CTTGAG	1 cut(s)	1129
BsaJI	CCNNGG	4 cut(s)	215, 834, 916, 1172
BsaWI	WCCGGW	1 cut(s)	279
Bsc4I	CCNNNNNNNGG	5 cut(s)	386, 461, 728, 781, 975
Bse1I	ACTGG	1 cut(s)	142
BseBI	CCWGG	3 cut(s)	166, 776, 836
BseDI	CCNNGG	4 cut(s)	215, 834, 916, 1172
BseGI	GGATG	1 cut(s)	138
BseLI	CCNNNNNNNGG	5 cut(s)	386, 461, 728, 781, 975
BseMII	CTCAG	1 cut(s)	561
BseNI	ACTGG	1 cut(s)	142
BseRI	GAGGAG	2 cut(s)	917, 1108
BseXI	GCAGC	2 cut(s)	198, 610
Bsh1285I	CGRYCG	1 cut(s)	528
BshFI	GGCC	3 cut(s)	51, 504, 523
BshNI	GGYRCC	2 cut(s)	451, 771
BsiEI	CGRYCG	1 cut(s)	528
BsiHKAI	GWGCWC	4 cut(s)	394, 471, 873, 895
BsiHKCI	CYCGRG	1 cut(s)	393
BsiSI	CCGG	1 cut(s)	280
BslI	CCNNNNNNNGG	5 cut(s)	386, 461, 728, 781, 975
BsmAI	GTCTC	1 cut(s)	165
BsmI	GAATGC	1 cut(s)	580
BsnI	GGCC	3 cut(s)	51, 504, 523
BsoBI	CYCGRG	1 cut(s)	393
Bsp119I	TTCGAA	1 cut(s)	558
Bsp1286I	GDGCHC	4 cut(s)	394, 471, 873, 895
Bsp143I	GATC	3 cut(s)	61, 317, 336
Bsp1720I	GCTNAGC	1 cut(s)	980
Bsp19I	CCATGG	1 cut(s)	215
BspACI	CCGC	3 cut(s)	364, 608, 984
BspANI	GGCC	3 cut(s)	51, 504, 523
BspCNI	CTCAG	1 cut(s)	562
BspHI	TCATGA	1 cut(s)	64
BspLI	GGNNCC	3 cut(s)	453, 773, 988
BspPI	GGATC	1 cut(s)	325
BspT104I	TTCGAA	1 cut(s)	558
BspT107I	GGYRCC	2 cut(s)	451, 771
BsrI	ACTGG	1 cut(s)	142
BssECI	CCNNGG	4 cut(s)	215, 834, 916, 1172
BssMI	GATC	3 cut(s)	61, 317, 336
BssSI	CACGAG	1 cut(s)	344
BssT1I	CCWWGG	3 cut(s)	215, 916, 1172
Bst2BI	CACGAG	1 cut(s)	344
Bst2UI	CCWGG	3 cut(s)	166, 776, 836
Bst4CI	ACNGT	3 cut(s)	260, 473, 875
Bst6I	CTCTTC	3 cut(s)	248, 451, 970
BstBI	TTCGAA	1 cut(s)	558
BstC8I	GCNNGC	1 cut(s)	944
BstDEI	CTNAG	2 cut(s)	570, 980
BstDSI	CCRYGG	1 cut(s)	215
BstENI	CCTNNNNNAGG	1 cut(s)	779
BstF5I	GGATG	1 cut(s)	138
BstH2I	RGCGCY	1 cut(s)	1004
BstHHI	GCGC	1 cut(s)	1003
BstKTI	GATC	3 cut(s)	64, 320, 339
BstMAI	GTCTC	1 cut(s)	165
BstMBI	GATC	3 cut(s)	61, 317, 336
BstMCI	CGRYCG	1 cut(s)	528
BstMWI	GCNNNNNNNGC	1 cut(s)	126
BstNI	CCWGG	3 cut(s)	166, 776, 836
BstNSI	RCATGY	1 cut(s)	946
BstSCI	CCNGG	3 cut(s)	164, 774, 834
BstSFI	CTRYAG	1 cut(s)	1059
BstV1I	GCAGC	2 cut(s)	198, 610
BstXI	CCANNNNNNTGG	1 cut(s)	1173
BsuRI	GGCC	3 cut(s)	51, 504, 523
BtgI	CCRYGG	1 cut(s)	215
BtsCI	GGATG	1 cut(s)	138
BtsI	GCAGTG	2 cut(s)	36, 640
BtsIMutI	CAGTG	5 cut(s)	36, 149, 469, 640, 871
Cac8I	GCNNGC	1 cut(s)	944
CciI	TCATGA	1 cut(s)	64
CfoI	GCGC	1 cut(s)	1003
CseI	GACGC	1 cut(s)	1087
CsiI	ACCWGGT	1 cut(s)	774
Csp6I	GTAC	4 cut(s)	452, 757, 772, 1044
CspCI	CAANNNNNGTGG	2 cut(s)	1136, 1171
CviAII	CATG	7 cut(s)	65, 100, 216, 340, 537, 797, 943
CviQI	GTAC	4 cut(s)	452, 757, 772, 1044
DdeI	CTNAG	2 cut(s)	570, 980
DpnI	GATC	3 cut(s)	63, 319, 338
DpnII	GATC	3 cut(s)	61, 317, 336
DraIII	CACNNNGTG	1 cut(s)	311
EaeI	YGGCCR	2 cut(s)	49, 502
Eam1104I	CTCTTC	3 cut(s)	248, 451, 970
EarI	CTCTTC	3 cut(s)	248, 451, 970
Eco130I	CCWWGG	3 cut(s)	215, 916, 1172
Eco32I	GATATC	1 cut(s)	15
Eco57I	CTGAAG	1 cut(s)	864
Eco88I	CYCGRG	1 cut(s)	393
EcoNI	CCTNNNNNAGG	1 cut(s)	779
EcoRII	CCWGG	3 cut(s)	164, 774, 834
EcoRV	GATATC	1 cut(s)	15
EcoT14I	CCWWGG	3 cut(s)	215, 916, 1172
EcoT22I	ATGCAT	3 cut(s)	422, 717, 962
ErhI	CCWWGG	3 cut(s)	215, 916, 1172
FaeI	CATG	7 cut(s)	68, 103, 219, 343, 540, 800, 946
FalI	AAGNNNNNCTT	2 cut(s)	743, 775
FatI	CATG	7 cut(s)	64, 99, 215, 339, 536, 796, 942
FauI	CCCGC	1 cut(s)	601
FbaI	TGATCA	1 cut(s)	336
FblI	GTMKAC	1 cut(s)	1065
Fnu4HI	GCNGC	4 cut(s)	187, 364, 624, 985
FokI	GGATG	1 cut(s)	125
Fsp4HI	GCNGC	4 cut(s)	187, 364, 624, 985
FspBI	CTAG	4 cut(s)	630, 687, 723, 830
GlaI	GCGC	1 cut(s)	1002
GluI	GCNGC	4 cut(s)	187, 364, 624, 985
HaeII	RGCGCY	1 cut(s)	1004
HaeIII	GGCC	3 cut(s)	51, 504, 523
HapII	CCGG	1 cut(s)	280
HgaI	GACGC	1 cut(s)	1087
HhaI	GCGC	1 cut(s)	1003
Hin1II	CATG	7 cut(s)	68, 103, 219, 343, 540, 800, 946
Hin6I	GCGC	1 cut(s)	1001
HinP1I	GCGC	1 cut(s)	1001
HincII	GTYRAC	2 cut(s)	913, 1066
HindII	GTYRAC	2 cut(s)	913, 1066
HindIII	AAGCTT	1 cut(s)	552
HinfI	GANTC	5 cut(s)	230, 396, 541, 791, 1144
HpaII	CCGG	1 cut(s)	280
HphI	GGTGA	4 cut(s)	197, 493, 850, 1047
Hpy166II	GTNNAC	3 cut(s)	913, 1066, 1161
Hpy188I	TCNGA	3 cut(s)	765, 927, 970
Hpy188III	TCNNGA	6 cut(s)	18, 65, 149, 373, 581, 590
Hpy8I	GTNNAC	3 cut(s)	913, 1066, 1161
Hpy99I	CGWCG	1 cut(s)	62
HpyAV	CCTTC	3 cut(s)	218, 417, 839
HpyCH4III	ACNGT	3 cut(s)	260, 473, 875
HpyCH4IV	ACGT	1 cut(s)	153
HpyCH4V	TGCA	8 cut(s)	115, 343, 420, 626, 638, 715, 960, 1017
HpyF10VI	GCNNNNNNNGC	1 cut(s)	126
HpyF3I	CTNAG	2 cut(s)	570, 980
HpySE526I	ACGT	1 cut(s)	153
Hsp92II	CATG	7 cut(s)	68, 103, 219, 343, 540, 800, 946
HspAI	GCGC	1 cut(s)	1001
KpnI	GGTACC	2 cut(s)	455, 775
Ksp22I	TGATCA	1 cut(s)	336
Kzo9I	GATC	3 cut(s)	61, 317, 336
LmnI	GCTCC	4 cut(s)	466, 868, 992, 1095
Lsp1109I	GCAGC	2 cut(s)	198, 610
LweI	GCATC	1 cut(s)	969
MabI	ACCWGGT	1 cut(s)	774
MaeI	CTAG	4 cut(s)	630, 687, 723, 830
MaeII	ACGT	1 cut(s)	153
MaeIII	GTNAC	4 cut(s)	149, 272, 818, 838
MalI	GATC	3 cut(s)	63, 319, 338
MboI	GATC	3 cut(s)	61, 317, 336
MboII	GAAGA	5 cut(s)	16, 235, 238, 438, 957
MfeI	CAATTG	1 cut(s)	321
MhlI	GDGCHC	4 cut(s)	394, 471, 873, 895
MlsI	TGGCCA	1 cut(s)	51
MluCI	AATT	8 cut(s)	177, 285, 321, 490, 644, 667, 800, 1149
MluNI	TGGCCA	1 cut(s)	51
MlyI	GAGTC	2 cut(s)	405, 535
MmeI	TCCRAC	3 cut(s)	295, 846, 905
MnlI	CCTC	7 cut(s)	135, 210, 319, 454, 895, 968, 1086
Mox20I	TGGCCA	1 cut(s)	51
Mph1103I	ATGCAT	3 cut(s)	422, 717, 962
MroXI	GAANNNNTTC	2 cut(s)	804, 849
MscI	TGGCCA	1 cut(s)	51
MseI	TTAA	4 cut(s)	300, 354, 489, 948
MslI	CAYNNNNRTG	3 cut(s)	348, 415, 474
Msp20I	TGGCCA	1 cut(s)	51
MspA1I	CMGCKG	1 cut(s)	698
MspI	CCGG	1 cut(s)	280
MspR9I	CCNGG	3 cut(s)	166, 776, 836
MunI	CAATTG	1 cut(s)	321
Mva1269I	GAATGC	1 cut(s)	580
MvaI	CCWGG	3 cut(s)	166, 776, 836
MwoI	GCNNNNNNNGC	1 cut(s)	126
NcoI	CCATGG	1 cut(s)	215
NdeII	GATC	3 cut(s)	61, 317, 336
NlaIII	CATG	7 cut(s)	68, 103, 219, 343, 540, 800, 946
NlaIV	GGNNCC	3 cut(s)	453, 773, 988
NmeAIII	GCCGAG	1 cut(s)	1160
NmuCI	GTSAC	3 cut(s)	149, 272, 838
NsiI	ATGCAT	3 cut(s)	422, 717, 962
NspI	RCATGY	1 cut(s)	946
NspV	TTCGAA	1 cut(s)	558
PaeI	GCATGC	1 cut(s)	946
PaeR7I	CTCGAG	1 cut(s)	393
PagI	TCATGA	1 cut(s)	64
PcsI	WCGNNNNNNNCGW	1 cut(s)	555
PctI	GAATGC	1 cut(s)	580
PdmI	GAANNNNTTC	2 cut(s)	804, 849
PfeI	GAWTC	3 cut(s)	230, 791, 1144
PkrI	GCNGC	4 cut(s)	188, 365, 625, 986
PleI	GAGTC	2 cut(s)	404, 535
PpsI	GAGTC	2 cut(s)	404, 535
Psp6I	CCWGG	3 cut(s)	164, 774, 834
PspGI	CCWGG	3 cut(s)	164, 774, 834
PspN4I	GGNNCC	3 cut(s)	453, 773, 988
PspXI	VCTCGAGB	1 cut(s)	393
PvuII	CAGCTG	1 cut(s)	698
RsaI	GTAC	4 cut(s)	453, 758, 773, 1045
RsaNI	GTAC	4 cut(s)	452, 757, 772, 1044
RseI	CAYNNNNRTG	3 cut(s)	348, 415, 474
SalI	GTCGAC	1 cut(s)	1064
SaqAI	TTAA	4 cut(s)	300, 354, 489, 948
SatI	GCNGC	4 cut(s)	187, 364, 624, 985
Sau3AI	GATC	3 cut(s)	61, 317, 336
ScaI	AGTACT	1 cut(s)	1045
SchI	GAGTC	2 cut(s)	405, 535
ScrFI	CCNGG	3 cut(s)	166, 776, 836
SduI	GDGCHC	4 cut(s)	394, 471, 873, 895
SexAI	ACCWGGT	1 cut(s)	774
SfaNI	GCATC	1 cut(s)	969
SfcI	CTRYAG	1 cut(s)	1059
Sfr274I	CTCGAG	1 cut(s)	393
SfuI	TTCGAA	1 cut(s)	558
SlaI	CTCGAG	1 cut(s)	393
SmiMI	CAYNNNNRTG	3 cut(s)	348, 415, 474
SmlI	CTYRAG	2 cut(s)	393, 1108
SmoI	CTYRAG	2 cut(s)	393, 1108
SphI	GCATGC	1 cut(s)	946
Sse9I	AATT	8 cut(s)	177, 285, 321, 490, 644, 667, 800, 1149
SsiI	CCGC	3 cut(s)	364, 608, 984
SspMI	CTAG	4 cut(s)	630, 687, 723, 830
StyD4I	CCNGG	3 cut(s)	164, 774, 834
StyI	CCWWGG	3 cut(s)	215, 916, 1172
TaaI	ACNGT	3 cut(s)	260, 473, 875
TaiI	ACGT	1 cut(s)	156
TaqI	TCGA	8 cut(s)	228, 290, 394, 549, 558, 582, 589, 1065
TaqII	GACCGA	1 cut(s)	542
TasI	AATT	8 cut(s)	177, 285, 321, 490, 644, 667, 800, 1149
TatI	WGTACW	2 cut(s)	756, 1043
TauI	GCSGC	2 cut(s)	366, 987
TfiI	GAWTC	3 cut(s)	230, 791, 1144
Tru1I	TTAA	4 cut(s)	300, 354, 489, 948
Tru9I	TTAA	4 cut(s)	300, 354, 489, 948
TscAI	CASTG	5 cut(s)	43, 149, 476, 640, 878
TseFI	GTSAC	3 cut(s)	149, 272, 838
TseI	GCWGC	2 cut(s)	186, 623
Tsp45I	GTSAC	3 cut(s)	149, 272, 838
TspDTI	ATGAA	4 cut(s)	17, 238, 399, 813
TspRI	CASTG	5 cut(s)	43, 149, 476, 640, 878
XagI	CCTNNNNNAGG	1 cut(s)	779
XapI	RAATTY	2 cut(s)	285, 644
XceI	RCATGY	1 cut(s)	946
XhoI	CTCGAG	1 cut(s)	393
XmiI	GTMKAC	1 cut(s)	1065
XmnI	GAANNNNTTC	2 cut(s)	804, 849
XspI	CTAG	4 cut(s)	630, 687, 723, 830
ZrmI	AGTACT	1 cut(s)	1045
Zsp2I	ATGCAT	3 cut(s)	422, 717, 962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.