Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000142

Physical Location & Seq

Genomic Coordinates Forward (+)

37152197 .. 37154331

Gene Structure 2135 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g49640.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1386 bp

ATGCTGTTGCAGACTAAACGTCATGTAGGCCGGAAGGTGATCGGAGCTATGTCCTCTGTTAGAAGGATGCGAGACAAATTAATGAAACATTGTGGAGTAGAGAGTAGGTGGTCGAATAATCTCCCTGAAGAAATCCTGCATTTGGTTCTACAGCGGCTTTGTATACAAAATTATGTGCGGTGTAGGTCAGTATGCGTTTCGTGGCGGGGGATTATTGATATGGCGATTGCCAGCAAATGCATTAGGCCTGCTCCTCAACTGCCATGGCTTGTGCTCCATGTTCATCGCTTTTCCCTCAAAGATACTTGCTTTCTAAGTCTGAGTGACCAGAAAACCTACAAGCCGAATCCCACTCATATGAATAGGCTCAACTGTGTTGGGTCAATCGAGGGGTGGTTGGTTATGGTTGATAATGCTGGTTGGCATCCCGAGGCTTTTATGAATCTCTGGTCATTCTTCATACATCGTCGTTATAGCGCTTATACCACTGTCAACTACTTCTTCAATCCAGTATCAGGGGTCAAGTTACCATCACAATCTGCTATTCCATGGATCAGTGGCAGGAACCATCGGCCTACCTTCTTTTATCAGGTAGTAGCCTCTTCAGTACCAACAAGCCCTCATTGTCTTGTTGCTGGCCTTTGTTCAAATGGTCAAGGGCCAACTGATAAATCATGGACTCCCATTACAGGGGAGGAGGTAAGAGGTCTCTATTTTGAGGCTATAGAAATAATTGATCGGAAAATATATGCCGTGACAGAGAGATCATCTATGTTTATTATGGTGTTTGACATACAAGATGCCCATGGCAGCTATCCTAGCTATAACACTGAAAGGTTAGTTATCCTTCACCCCAGGCCACATTCTTACCGGAGCTTCAATCTTTTAGCTGATGGAGTTAGGCATGTGACTGACATCGAAAGCAATCACCTAGTGAAAGATTCTGTATCAAAGGTGTTGTTTCTGATTCTTTGTTGTGTCAGATTTGCTTGTGAGGTAGATCCAATAGTTCCTTGGCACGAGATCATAGATGATAATAATACCATTCCACTTAAGAGTGATGGATTTCGAGTGTTCAAGCTGGAGTTTAATAAAGGTGCTCGATGGGTACAAGTTGATGACTTTGGTGATCGGATTTTGTTTATGGACAGGGCGGGCTGCAAATTCATCCCTGCCTCATTCAACAATAAGGCAGTCCTAACTAGAAATTGCATCTGTTTTGCTTTTGACAGTCCTTGTTGTTTTGCAACAGTGTCGTCAAGCAGACGTGATTTTGGAGTCTTTTCGTTGACAAACAAGACAATTGATCAGTACGCTTTCCCTGAAGATCATTCCTGTACCCGGTTAAATGCTCAACCTGTCTGGTTCACTCCAGACTTCTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030684 GO:0030686 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904 GO:2000232

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT_2 Pescadillo_N

Protein Analysis

462

Amino Acids

52.85

Weight (kDa)

8.86

Isoelectric Point (pI)

46.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	39 - 73	1e-06	F-box-like
F-box	PF00646	40 - 74	2.6e-08	F-box domain
Beta-prop_KIB1-4	PF03478	104 - 429	3e-27	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000142)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica	MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica	Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis	pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis	RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata	RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora	Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa	Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha	Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana	Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	163
AciI	CCGC	4 cut(s)	154, 178, 205, 1154
AclWI	GGATC	2 cut(s)	560, 995
AcsI	RAATTY	1 cut(s)	1163
AcuI	CTGAAG	3 cut(s)	147, 588, 1344
AdeI	CACNNNGTG	1 cut(s)	934
AfaI	GTAC	4 cut(s)	609, 1110, 1313, 1339
AfeI	AGCGCT	1 cut(s)	478
AfiI	CCNNNNNNNGG	5 cut(s)	142, 515, 689, 690, 1341
AflII	CTTAAG	1 cut(s)	1052
AgsI	TTSAA	5 cut(s)	505, 648, 880, 1078, 1183
AhdI	GACNNNNNGTC	1 cut(s)	18
AjiI	CACGTC	1 cut(s)	1268
AjnI	CCWGG	1 cut(s)	854
AluBI	AGCT	6 cut(s)	47, 813, 822, 876, 890, 1081
AluI	AGCT	6 cut(s)	47, 813, 822, 876, 890, 1081
Alw21I	GWGCWC	2 cut(s)	276, 1102
Alw26I	GTCTC	2 cut(s)	66, 713
AlwI	GGATC	2 cut(s)	560, 995
Ama87I	CYCGRG	1 cut(s)	428
Aor51HI	AGCGCT	1 cut(s)	478
AoxI	GGCC	6 cut(s)	28, 245, 572, 637, 659, 857
ApeKI	GCWGC	2 cut(s)	810, 1158
ApoI	RAATTY	1 cut(s)	1163
AseI	ATTAAT	1 cut(s)	80
AspLEI	GCGC	1 cut(s)	479
AspS9I	GGNCC	1 cut(s)	659
AsuC2I	CCSGG	1 cut(s)	1342
AsuHPI	GGTGA	4 cut(s)	49, 842, 920, 1139
AvaI	CYCGRG	1 cut(s)	428
BauI	CACGAG	1 cut(s)	1019
Bbv12I	GWGCWC	2 cut(s)	276, 1102
BbvI	GCAGC	2 cut(s)	822, 1145
BccI	CCATC	5 cut(s)	538, 576, 887, 1055, 1098
BceAI	ACGGC	1 cut(s)	737
BcgI	CGANNNNNNTGC	2 cut(s)	1236, 1270
BciT130I	CCWGG	1 cut(s)	856
BclI	TGATCA	1 cut(s)	1306
BcnI	CCSGG	1 cut(s)	1342
BcoDI	GTCTC	2 cut(s)	66, 713
BfaI	CTAG	3 cut(s)	819, 932, 1203
BfmI	CTRYAG	2 cut(s)	149, 723
BfoI	RGCGCY	1 cut(s)	480
BfrI	CTTAAG	1 cut(s)	1052
BisI	GCNGC	3 cut(s)	155, 811, 1159
BlsI	GCNGC	3 cut(s)	156, 812, 1160
Bme1390I	CCNGG	2 cut(s)	856, 1342
BmeRI	GACNNNNNGTC	1 cut(s)	18
BmeT110I	CYCGRG	1 cut(s)	428
BmgBI	CACGTC	1 cut(s)	1268
BmgT120I	GGNCC	1 cut(s)	659
BmiI	GGNNCC	1 cut(s)	566
BmrFI	CCNGG	2 cut(s)	856, 1342
BmsI	GCATC	4 cut(s)	57, 433, 790, 1221
BpmI	CTGGAG	2 cut(s)	1103, 1356
BpuMI	CCSGG	1 cut(s)	1342
BsaI	GGTCTC	1 cut(s)	713
BsaJI	CCNNGG	6 cut(s)	263, 429, 548, 805, 854, 1013
BsaWI	WCCGGW	1 cut(s)	870
Bsc4I	CCNNNNNNNGG	5 cut(s)	142, 515, 689, 690, 1341
Bse1I	ACTGG	1 cut(s)	509
BseBI	CCWGG	1 cut(s)	856
BseDI	CCNNGG	6 cut(s)	263, 429, 548, 805, 854, 1013
BseGI	GGATG	3 cut(s)	72, 424, 1167
BseLI	CCNNNNNNNGG	5 cut(s)	142, 515, 689, 690, 1341
BseMII	CTCAG	1 cut(s)	311
BseNI	ACTGG	1 cut(s)	509
BseRI	GAGGAG	2 cut(s)	243, 710
BseXI	GCAGC	2 cut(s)	822, 1145
BshFI	GGCC	6 cut(s)	30, 247, 574, 639, 661, 859
BsiHKAI	GWGCWC	2 cut(s)	276, 1102
BsiHKCI	CYCGRG	1 cut(s)	428
BsiSI	CCGG	3 cut(s)	31, 871, 1342
BslI	CCNNNNNNNGG	5 cut(s)	142, 515, 689, 690, 1341
BsmAI	GTCTC	2 cut(s)	66, 713
BsnI	GGCC	6 cut(s)	30, 247, 574, 639, 661, 859
Bso31I	GGTCTC	1 cut(s)	713
BsoBI	CYCGRG	1 cut(s)	428
Bsp1286I	GDGCHC	2 cut(s)	276, 1102
Bsp143I	GATC	9 cut(s)	39, 552, 736, 764, 1000, 1023, 1129, 1306, 1327
Bsp19I	CCATGG	3 cut(s)	263, 548, 805
BspACI	CCGC	4 cut(s)	154, 178, 205, 1154
BspANI	GGCC	6 cut(s)	30, 247, 574, 639, 661, 859
BspCNI	CTCAG	1 cut(s)	312
BspLI	GGNNCC	1 cut(s)	566
BspPI	GGATC	2 cut(s)	560, 995
BspTI	CTTAAG	1 cut(s)	1052
BspTNI	GGTCTC	1 cut(s)	713
BsrI	ACTGG	1 cut(s)	509
BssECI	CCNNGG	6 cut(s)	263, 429, 548, 805, 854, 1013
BssMI	GATC	9 cut(s)	39, 552, 736, 764, 1000, 1023, 1129, 1306, 1327
BssNAI	GTATAC	1 cut(s)	164
BssSI	CACGAG	1 cut(s)	1019
BssT1I	CCWWGG	4 cut(s)	263, 548, 805, 1013
Bst1107I	GTATAC	1 cut(s)	164
Bst2BI	CACGAG	1 cut(s)	1019
Bst2UI	CCWGG	1 cut(s)	856
Bst4CI	ACNGT	4 cut(s)	374, 490, 1232, 1252
Bst6I	CTCTTC	1 cut(s)	607
BstAFI	CTTAAG	1 cut(s)	1052
BstC8I	GCNNGC	4 cut(s)	232, 249, 637, 1156
BstDEI	CTNAG	2 cut(s)	314, 320
BstDSI	CCRYGG	3 cut(s)	263, 548, 805
BstF5I	GGATG	3 cut(s)	72, 424, 1167
BstH2I	RGCGCY	1 cut(s)	480
BstHHI	GCGC	1 cut(s)	479
BstKTI	GATC	9 cut(s)	42, 555, 739, 767, 1003, 1026, 1132, 1309, 1330
BstMAI	GTCTC	2 cut(s)	66, 713
BstMBI	GATC	9 cut(s)	39, 552, 736, 764, 1000, 1023, 1129, 1306, 1327
BstMWI	GCNNNNNNNGC	1 cut(s)	819
BstNI	CCWGG	1 cut(s)	856
BstNSI	RCATGY	1 cut(s)	908
BstSCI	CCNGG	2 cut(s)	854, 1340
BstSFI	CTRYAG	2 cut(s)	149, 723
BstV1I	GCAGC	2 cut(s)	822, 1145
BstX2I	RGATCY	1 cut(s)	1000
BstYI	RGATCY	1 cut(s)	1000
BstZ17I	GTATAC	1 cut(s)	164
BsuRI	GGCC	6 cut(s)	30, 247, 574, 639, 661, 859
BtgI	CCRYGG	3 cut(s)	263, 548, 805
BtgZI	GCGATG	1 cut(s)	269
BtrI	CACGTC	1 cut(s)	1268
BtsCI	GGATG	3 cut(s)	72, 424, 1167
BtsIMutI	CAGTG	4 cut(s)	486, 562, 828, 1257
Cac8I	GCNNGC	4 cut(s)	232, 249, 637, 1156
CfoI	GCGC	1 cut(s)	479
Cfr13I	GGNCC	1 cut(s)	659
Csp6I	GTAC	4 cut(s)	608, 1109, 1312, 1338
CviAII	CATG	7 cut(s)	23, 264, 278, 549, 675, 806, 905
CviQI	GTAC	4 cut(s)	608, 1109, 1312, 1338
DdeI	CTNAG	2 cut(s)	314, 320
DpnI	GATC	9 cut(s)	41, 554, 738, 766, 1002, 1025, 1131, 1308, 1329
DpnII	GATC	9 cut(s)	39, 552, 736, 764, 1000, 1023, 1129, 1306, 1327
DraIII	CACNNNGTG	1 cut(s)	934
DriI	GACNNNNNGTC	1 cut(s)	18
Eam1104I	CTCTTC	1 cut(s)	607
Eam1105I	GACNNNNNGTC	1 cut(s)	18
EarI	CTCTTC	1 cut(s)	607
Eco130I	CCWWGG	4 cut(s)	263, 548, 805, 1013
Eco147I	AGGCCT	1 cut(s)	247
Eco31I	GGTCTC	1 cut(s)	713
Eco47III	AGCGCT	1 cut(s)	478
Eco57I	CTGAAG	3 cut(s)	147, 588, 1344
Eco88I	CYCGRG	1 cut(s)	428
EcoRII	CCWGG	1 cut(s)	854
EcoT14I	CCWWGG	4 cut(s)	263, 548, 805, 1013
EcoT22I	ATGCAT	1 cut(s)	242
ErhI	CCWWGG	4 cut(s)	263, 548, 805, 1013
FaeI	CATG	7 cut(s)	26, 267, 281, 552, 678, 809, 908
FatI	CATG	7 cut(s)	22, 263, 277, 548, 674, 805, 904
FauI	CCCGC	2 cut(s)	198, 1147
FauNDI	CATATG	1 cut(s)	357
FbaI	TGATCA	1 cut(s)	1306
FblI	GTMKAC	1 cut(s)	163
Fnu4HI	GCNGC	3 cut(s)	155, 811, 1159
FokI	GGATG	3 cut(s)	79, 411, 1154
Fsp4HI	GCNGC	3 cut(s)	155, 811, 1159
FspBI	CTAG	3 cut(s)	819, 932, 1203
GlaI	GCGC	1 cut(s)	478
GluI	GCNGC	3 cut(s)	155, 811, 1159
GsuI	CTGGAG	2 cut(s)	1103, 1356
HaeII	RGCGCY	1 cut(s)	480
HaeIII	GGCC	6 cut(s)	30, 247, 574, 639, 661, 859
HapII	CCGG	3 cut(s)	31, 871, 1342
HhaI	GCGC	1 cut(s)	479
Hin1II	CATG	7 cut(s)	26, 267, 281, 552, 678, 809, 908
Hin6I	GCGC	1 cut(s)	477
HinP1I	GCGC	1 cut(s)	477
HincII	GTYRAC	2 cut(s)	493, 1290
HindII	GTYRAC	2 cut(s)	493, 1290
HinfI	GANTC	6 cut(s)	346, 442, 679, 941, 967, 1278
HpaII	CCGG	3 cut(s)	31, 871, 1342
HphI	GGTGA	4 cut(s)	49, 842, 920, 1139
Hpy166II	GTNNAC	4 cut(s)	164, 493, 1290, 1368
Hpy188I	TCNGA	6 cut(s)	44, 321, 741, 966, 983, 1134
Hpy188III	TCNNGA	2 cut(s)	428, 1373
Hpy8I	GTNNAC	4 cut(s)	164, 493, 1290, 1368
Hpy99I	CGWCG	1 cut(s)	471
HpyAV	CCTTC	4 cut(s)	28, 57, 589, 857
HpyCH4III	ACNGT	4 cut(s)	374, 490, 1232, 1252
HpyCH4IV	ACGT	2 cut(s)	19, 1267
HpyCH4V	TGCA	6 cut(s)	10, 139, 240, 1161, 1212, 1247
HpyF10VI	GCNNNNNNNGC	1 cut(s)	819
HpyF3I	CTNAG	2 cut(s)	314, 320
HpySE526I	ACGT	2 cut(s)	19, 1267
Hsp92II	CATG	7 cut(s)	26, 267, 281, 552, 678, 809, 908
HspAI	GCGC	1 cut(s)	477
Ksp22I	TGATCA	1 cut(s)	1306
Kzo9I	GATC	9 cut(s)	39, 552, 736, 764, 1000, 1023, 1129, 1306, 1327
LmnI	GCTCC	4 cut(s)	44, 256, 279, 873
Lsp1109I	GCAGC	2 cut(s)	822, 1145
LweI	GCATC	4 cut(s)	57, 433, 790, 1221
MaeI	CTAG	3 cut(s)	819, 932, 1203
MaeII	ACGT	2 cut(s)	19, 1267
MaeIII	GTNAC	4 cut(s)	323, 525, 754, 907
MalI	GATC	9 cut(s)	41, 554, 738, 766, 1002, 1025, 1131, 1308, 1329
MboI	GATC	9 cut(s)	39, 552, 736, 764, 1000, 1023, 1129, 1306, 1327
MboII	GAAGA	5 cut(s)	140, 448, 493, 594, 1337
MfeI	CAATTG	1 cut(s)	1302
MflI	RGATCY	1 cut(s)	1000
MhlI	GDGCHC	2 cut(s)	276, 1102
MluCI	AATT	6 cut(s)	77, 169, 732, 1163, 1207, 1302
MlyI	GAGTC	2 cut(s)	673, 1287
Mph1103I	ATGCAT	1 cut(s)	242
MseI	TTAA	4 cut(s)	80, 1053, 1089, 1346
MslI	CAYNNNNRTG	1 cut(s)	356
MspA1I	CMGCKG	1 cut(s)	154
MspCI	CTTAAG	1 cut(s)	1052
MspI	CCGG	3 cut(s)	31, 871, 1342
MspR9I	CCNGG	2 cut(s)	856, 1342
MunI	CAATTG	1 cut(s)	1302
MvaI	CCWGG	1 cut(s)	856
MwoI	GCNNNNNNNGC	1 cut(s)	819
NciI	CCSGG	1 cut(s)	1342
NcoI	CCATGG	3 cut(s)	263, 548, 805
NdeI	CATATG	1 cut(s)	357
NdeII	GATC	9 cut(s)	39, 552, 736, 764, 1000, 1023, 1129, 1306, 1327
NlaIII	CATG	7 cut(s)	26, 267, 281, 552, 678, 809, 908
NlaIV	GGNNCC	1 cut(s)	566
NmuCI	GTSAC	3 cut(s)	323, 754, 907
NsiI	ATGCAT	1 cut(s)	242
NspI	RCATGY	1 cut(s)	908
PceI	AGGCCT	1 cut(s)	247
PfeI	GAWTC	4 cut(s)	346, 442, 941, 967
PkrI	GCNGC	3 cut(s)	156, 812, 1160
PleI	GAGTC	2 cut(s)	673, 1286
PpsI	GAGTC	2 cut(s)	673, 1286
PshBI	ATTAAT	1 cut(s)	80
Psp6I	CCWGG	1 cut(s)	854
PspGI	CCWGG	1 cut(s)	854
PspN4I	GGNNCC	1 cut(s)	566
PspPI	GGNCC	1 cut(s)	659
PsuI	RGATCY	1 cut(s)	1000
RsaI	GTAC	4 cut(s)	609, 1110, 1313, 1339
RsaNI	GTAC	4 cut(s)	608, 1109, 1312, 1338
RseI	CAYNNNNRTG	1 cut(s)	356
SaqAI	TTAA	4 cut(s)	80, 1053, 1089, 1346
SatI	GCNGC	3 cut(s)	155, 811, 1159
Sau3AI	GATC	9 cut(s)	39, 552, 736, 764, 1000, 1023, 1129, 1306, 1327
Sau96I	GGNCC	1 cut(s)	659
SchI	GAGTC	2 cut(s)	673, 1287
ScrFI	CCNGG	2 cut(s)	856, 1342
SduI	GDGCHC	2 cut(s)	276, 1102
SfaNI	GCATC	4 cut(s)	57, 433, 790, 1221
SfcI	CTRYAG	2 cut(s)	149, 723
SmiMI	CAYNNNNRTG	1 cut(s)	356
SmlI	CTYRAG	1 cut(s)	1052
SmoI	CTYRAG	1 cut(s)	1052
Sse9I	AATT	6 cut(s)	77, 169, 732, 1163, 1207, 1302
SseBI	AGGCCT	1 cut(s)	247
SsiI	CCGC	4 cut(s)	154, 178, 205, 1154
SspMI	CTAG	3 cut(s)	819, 932, 1203
StuI	AGGCCT	1 cut(s)	247
StyD4I	CCNGG	2 cut(s)	854, 1340
StyI	CCWWGG	4 cut(s)	263, 548, 805, 1013
TaaI	ACNGT	4 cut(s)	374, 490, 1232, 1252
TaiI	ACGT	2 cut(s)	22, 1270
TaqI	TCGA	5 cut(s)	113, 387, 918, 1069, 1102
TasI	AATT	6 cut(s)	77, 169, 732, 1163, 1207, 1302
TauI	GCSGC	1 cut(s)	157
TfiI	GAWTC	4 cut(s)	346, 442, 941, 967
Tru1I	TTAA	4 cut(s)	80, 1053, 1089, 1346
Tru9I	TTAA	4 cut(s)	80, 1053, 1089, 1346
TscAI	CASTG	4 cut(s)	493, 562, 835, 1257
TseFI	GTSAC	3 cut(s)	323, 754, 907
TseI	GCWGC	2 cut(s)	810, 1158
Tsp45I	GTSAC	3 cut(s)	323, 754, 907
TspDTI	ATGAA	6 cut(s)	98, 272, 374, 448, 455, 1156
TspRI	CASTG	4 cut(s)	493, 562, 835, 1257
Vha464I	CTTAAG	1 cut(s)	1052
VspI	ATTAAT	1 cut(s)	80
XapI	RAATTY	1 cut(s)	1163
XceI	RCATGY	1 cut(s)	908
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1011
XmiI	GTMKAC	1 cut(s)	163
XspI	CTAG	3 cut(s)	819, 932, 1203
Zsp2I	ATGCAT	1 cut(s)	242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.