Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000142

Physical Location & Seq

Genomic Coordinates Forward (+)

35731665 .. 35733809

Gene Structure 2145 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g47002.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGGCGGTCATTAGAAAGCTGCTGAGTAATAAGAACAAACAGAAAAAATATGATTGCGAAGAAGATCGTGATGAAGAGATCAGAACAAGAAGTTGCTCCAAGGAATTCCTAGAAGATATCATGAGGCTAATTCTACCACAGCTATGCAAATCAGATTACCTTTCATGCAGAGTAGTATGTCATTCTTGGCGAGCCGCTGTTGATAAGGCTATTGAGAGCAAGAACTGCCTTCCTGCTTCTCGACTTCCATGGCTAATTTGTCTTGATTCTCGTCGGCGATTTCGGGCCAAAGACCATTGCTTTGTTAATCAAAAACTTTACAAGTCAGTGGGGAAGTTAGACCGGCTGACTGCTTTTGTTTCTTTTTCTAGGCGCAAATTAGTCGGGTCAATTGAGGGGTGGTTGATCATGGTTGAACATAAAACTGTCTACTTCTTGAATCCAATATCGGGTGCCCGAGTGATGCTCCCATCGGGATCCACCATTCATTCCTTCAAGAAAGCAGTAGCTTCTACTGTACCAACCAGGTTGCAGCATTGTCTTGTTGCTAGCCTAAGTAGAAAACACCGTTTGGCCTTCTGTAAGCCAACGGATAAATCTTGGACCATTATTGAGGTTGAAGGTGAAGAGGATGAACTCGAGTTTGATGATATCGAAATAATCGATGAGAAACTATATGCTGCTACTCACCTTGCATCAGAATCTTTAATGGTGTTTCACATTTCATATGCCGACGGCGGCGGCCCTCCTACCTGCACGGCTGAATGGTTGGTTATAAATCACCCGAGGCTAGTTCGTGATCAAATTTTCGAAGATATCATTCCTCCTCCGGGGGATAATGGAGTACCGGAGTTCACTTACACGGGGGCTACAAGCCCTTACCTAGCAAAAGATTCTGCATCAAAGGAGTTGTTTATGATTTTCCGAAACATTAGGGTATCTCTTAAGCCGGCTACTTGTTTCGACATGACTGCTAAGTCATGCGAGACTCAAGGATTCCGAGTATTCAAGTTGGAGGGTAACATTGTTAATGGTCGACCTCGGTGGGTAGAGATTGTCGACCTTGGTGATCGGATATTGTTTGTTAGTCGTCTCAGCAACAAGTTCGTCTCTTCCGGCAATGGTCCTAGTTCCTGCAGTGACAATAAGGAATTCGAAAGGAACTGTATCTATTATGCTTTCAGTTGGCCATCAGTATTTTTTCTGCATGAGTATGAGGTGCGTGCATTGAAAAAATTTCGTGACTTTGGGGTGTATTCTTTGACAAATAGGAGCATCCATGCTTTACCAAAGCATCATGCCAGATCCTTGCACCGTCAATTAGCTTGGTTTACACCAAATCCAAATCTGTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030684 GO:0030686 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904 GO:2000232

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT_2 Pescadillo_N

Protein Analysis

452

Amino Acids

51.8

Weight (kDa)

8.98

Isoelectric Point (pI)

50.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	121 - 419	6.1e-33	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000142)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica	MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica	Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis	pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis	RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata	RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora	Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa	Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha	Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana	Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	776
AasI	GACNNNNNNGTC	1 cut(s)	976
Acc36I	ACCTGC	1 cut(s)	761
AccB1I	GGYRCC	1 cut(s)	452
AccI	GTMKAC	3 cut(s)	429, 1036, 1059
AciI	CCGC	4 cut(s)	5, 195, 738, 741
AclWI	GGATC	3 cut(s)	471, 484, 1299
AcoI	YGGCCR	1 cut(s)	1187
AcsI	RAATTY	4 cut(s)	104, 804, 1151, 1235
AfaI	GTAC	2 cut(s)	519, 846
AfiI	CCNNNNNNNGG	2 cut(s)	449, 830
AflII	CTTAAG	1 cut(s)	944
AgsI	TTSAA	6 cut(s)	416, 439, 496, 620, 1009, 1231
AjnI	CCWGG	1 cut(s)	524
AluBI	AGCT	4 cut(s)	19, 142, 509, 1325
AluI	AGCT	4 cut(s)	19, 142, 509, 1325
Alw26I	GTCTC	3 cut(s)	980, 1097, 1114
AlwI	GGATC	3 cut(s)	471, 484, 1299
Ama87I	CYCGRG	3 cut(s)	456, 638, 784
AoxI	GGCC	4 cut(s)	285, 573, 742, 1187
ApeKI	GCWGC	3 cut(s)	19, 532, 680
ApoI	RAATTY	4 cut(s)	104, 804, 1151, 1235
ArsI	GACNNNNNNTTYG	2 cut(s)	284, 316
AspLEI	GCGC	1 cut(s)	375
AspS9I	GGNCC	4 cut(s)	285, 603, 743, 1124
AsuC2I	CCSGG	1 cut(s)	831
AsuHPI	GGTGA	4 cut(s)	635, 680, 773, 1079
AsuII	TTCGAA	2 cut(s)	810, 1155
AsuNHI	GCTAGC	1 cut(s)	548
AvaI	CYCGRG	3 cut(s)	456, 638, 784
AvaII	GGWCC	2 cut(s)	603, 1124
BaeGI	GKGCMC	1 cut(s)	457
BalI	TGGCCA	1 cut(s)	1189
BamHI	GGATCC	1 cut(s)	476
BanI	GGYRCC	1 cut(s)	452
BbvI	GCAGC	3 cut(s)	6, 544, 667
BccI	CCATC	2 cut(s)	478, 1198
BceAI	ACGGC	2 cut(s)	751, 774
BcgI	CGANNNNNNTGC	6 cut(s)	364, 398, 953, 987, 1087, 1121
BciT130I	CCWGG	1 cut(s)	526
BclI	TGATCA	2 cut(s)	405, 799
BcnI	CCSGG	1 cut(s)	831
BcoDI	GTCTC	3 cut(s)	980, 1097, 1114
BfaI	CTAG	6 cut(s)	110, 369, 549, 791, 884, 1128
BfmI	CTRYAG	1 cut(s)	1135
BfrI	CTTAAG	1 cut(s)	944
BfuAI	ACCTGC	1 cut(s)	761
BisI	GCNGC	6 cut(s)	20, 195, 533, 681, 739, 742
BlsI	GCNGC	6 cut(s)	21, 196, 534, 682, 740, 743
Bme1390I	CCNGG	2 cut(s)	526, 831
Bme18I	GGWCC	2 cut(s)	603, 1124
BmeT110I	CYCGRG	3 cut(s)	456, 638, 784
BmgT120I	GGNCC	4 cut(s)	285, 603, 743, 1124
BmiI	GGNNCC	2 cut(s)	454, 478
BmrFI	CCNGG	2 cut(s)	526, 831
BmsI	GCATC	5 cut(s)	453, 704, 908, 1284, 1303
BmtI	GCTAGC	1 cut(s)	552
BplI	GAGNNNNNCTC	2 cut(s)	450, 482
Bpu14I	TTCGAA	2 cut(s)	810, 1155
BpuEI	CTTGAG	1 cut(s)	975
BpuMI	CCSGG	1 cut(s)	831
Bsa29I	ATCGAT	1 cut(s)	663
BsaJI	CCNNGG	6 cut(s)	99, 248, 785, 830, 1040, 1063
BsaWI	WCCGGW	1 cut(s)	847
Bsc4I	CCNNNNNNNGG	2 cut(s)	449, 830
Bse118I	RCCGGY	2 cut(s)	342, 949
Bse3DI	GCAATG	2 cut(s)	295, 1126
BseBI	CCWGG	1 cut(s)	526
BseCI	ATCGAT	1 cut(s)	663
BseDI	CCNNGG	6 cut(s)	99, 248, 785, 830, 1040, 1063
BseGI	GGATG	2 cut(s)	637, 1275
BseLI	CCNNNNNNNGG	2 cut(s)	449, 830
BseMI	GCAATG	2 cut(s)	295, 1126
BseMII	CTCAG	2 cut(s)	14, 1108
BseRI	GAGGAG	1 cut(s)	816
BseSI	GKGCMC	1 cut(s)	457
BseXI	GCAGC	3 cut(s)	6, 544, 667
BsgI	GTGCAG	1 cut(s)	739
BshFI	GGCC	4 cut(s)	287, 575, 744, 1189
BshNI	GGYRCC	1 cut(s)	452
BshVI	ATCGAT	1 cut(s)	663
BsiHKCI	CYCGRG	3 cut(s)	456, 638, 784
BsiSI	CCGG	5 cut(s)	343, 830, 848, 950, 1116
BslI	CCNNNNNNNGG	2 cut(s)	449, 830
BsmAI	GTCTC	3 cut(s)	980, 1097, 1114
BsmBI	CGTCTC	2 cut(s)	1097, 1114
BsnI	GGCC	4 cut(s)	287, 575, 744, 1189
BsoBI	CYCGRG	3 cut(s)	456, 638, 784
Bsp119I	TTCGAA	2 cut(s)	810, 1155
Bsp1286I	GDGCHC	1 cut(s)	457
Bsp143I	GATC	7 cut(s)	64, 78, 405, 476, 799, 1069, 1304
Bsp19I	CCATGG	1 cut(s)	248
BspACI	CCGC	4 cut(s)	5, 195, 738, 741
BspANI	GGCC	4 cut(s)	287, 575, 744, 1189
BspCNI	CTCAG	2 cut(s)	15, 1107
BspDI	ATCGAT	1 cut(s)	663
BspHI	TCATGA	1 cut(s)	120
BspLI	GGNNCC	2 cut(s)	454, 478
BspMAI	CTGCAG	1 cut(s)	1139
BspMI	ACCTGC	1 cut(s)	761
BspOI	GCTAGC	1 cut(s)	552
BspPI	GGATC	3 cut(s)	471, 484, 1299
BspT104I	TTCGAA	2 cut(s)	810, 1155
BspT107I	GGYRCC	1 cut(s)	452
BspTI	CTTAAG	1 cut(s)	944
BsrDI	GCAATG	2 cut(s)	295, 1126
BsrFI	RCCGGY	2 cut(s)	342, 949
BssAI	RCCGGY	2 cut(s)	342, 949
BssECI	CCNNGG	6 cut(s)	99, 248, 785, 830, 1040, 1063
BssMI	GATC	7 cut(s)	64, 78, 405, 476, 799, 1069, 1304
BssT1I	CCWWGG	3 cut(s)	99, 248, 1063
Bst2UI	CCWGG	1 cut(s)	526
Bst4CI	ACNGT	5 cut(s)	427, 517, 569, 1166, 1316
Bst6I	CTCTTC	3 cut(s)	69, 621, 1117
BstAFI	CTTAAG	1 cut(s)	944
BstAPI	GCANNNNNTGC	1 cut(s)	225
BstBI	TTCGAA	2 cut(s)	810, 1155
BstC8I	GCNNGC	4 cut(s)	192, 550, 951, 1224
BstDEI	CTNAG	4 cut(s)	23, 554, 975, 1094
BstDSI	CCRYGG	1 cut(s)	248
BstF5I	GGATG	2 cut(s)	637, 1275
BstHHI	GCGC	1 cut(s)	375
BstKTI	GATC	7 cut(s)	67, 81, 408, 479, 802, 1072, 1307
BstMAI	GTCTC	3 cut(s)	980, 1097, 1114
BstMBI	GATC	7 cut(s)	64, 78, 405, 476, 799, 1069, 1304
BstMWI	GCNNNNNNNGC	1 cut(s)	225
BstNI	CCWGG	1 cut(s)	526
BstSCI	CCNGG	2 cut(s)	524, 829
BstSFI	CTRYAG	1 cut(s)	1135
BstSLI	GKGCMC	1 cut(s)	457
BstV1I	GCAGC	3 cut(s)	6, 544, 667
BstX2I	RGATCY	2 cut(s)	476, 1304
BstXI	CCANNNNNNTGG	1 cut(s)	1350
BstYI	RGATCY	2 cut(s)	476, 1304
Bsu15I	ATCGAT	1 cut(s)	663
BsuRI	GGCC	4 cut(s)	287, 575, 744, 1189
BsuTUI	ATCGAT	1 cut(s)	663
BtgI	CCRYGG	1 cut(s)	248
BtsCI	GGATG	2 cut(s)	637, 1275
BtsI	GCAGTG	1 cut(s)	1144
BtsIMutI	CAGTG	2 cut(s)	333, 1144
BveI	ACCTGC	1 cut(s)	761
Cac8I	GCNNGC	4 cut(s)	192, 550, 951, 1224
CciI	TCATGA	1 cut(s)	120
CfoI	GCGC	1 cut(s)	375
Cfr10I	RCCGGY	2 cut(s)	342, 949
Cfr13I	GGNCC	4 cut(s)	285, 603, 743, 1124
ClaI	ATCGAT	1 cut(s)	663
CsiI	ACCWGGT	1 cut(s)	524
Csp6I	GTAC	2 cut(s)	518, 845
CviAII	CATG	9 cut(s)	121, 165, 249, 409, 967, 981, 1208, 1280, 1298
CviQI	GTAC	2 cut(s)	518, 845
DdeI	CTNAG	4 cut(s)	23, 554, 975, 1094
DpnI	GATC	7 cut(s)	66, 80, 407, 478, 801, 1071, 1306
DpnII	GATC	7 cut(s)	64, 78, 405, 476, 799, 1069, 1304
DrdI	GACNNNNNNGTC	1 cut(s)	976
DseDI	GACNNNNNNGTC	1 cut(s)	976
EaeI	YGGCCR	1 cut(s)	1187
Eam1104I	CTCTTC	3 cut(s)	69, 621, 1117
EarI	CTCTTC	3 cut(s)	69, 621, 1117
Eco130I	CCWWGG	3 cut(s)	99, 248, 1063
Eco32I	GATATC	3 cut(s)	118, 652, 817
Eco47I	GGWCC	2 cut(s)	603, 1124
Eco88I	CYCGRG	3 cut(s)	456, 638, 784
EcoRI	GAATTC	2 cut(s)	104, 1151
EcoRII	CCWGG	1 cut(s)	524
EcoRV	GATATC	3 cut(s)	118, 652, 817
EcoT14I	CCWWGG	3 cut(s)	99, 248, 1063
ErhI	CCWWGG	3 cut(s)	99, 248, 1063
Esp3I	CGTCTC	2 cut(s)	1097, 1114
FaeI	CATG	9 cut(s)	124, 168, 252, 412, 970, 984, 1211, 1283, 1301
FatI	CATG	9 cut(s)	120, 164, 248, 408, 966, 980, 1207, 1279, 1297
FauNDI	CATATG	1 cut(s)	727
FbaI	TGATCA	2 cut(s)	405, 799
FblI	GTMKAC	3 cut(s)	429, 1036, 1059
Fnu4HI	GCNGC	6 cut(s)	20, 195, 533, 681, 739, 742
FokI	GGATG	2 cut(s)	644, 1262
Fsp4HI	GCNGC	6 cut(s)	20, 195, 533, 681, 739, 742
FspBI	CTAG	6 cut(s)	110, 369, 549, 791, 884, 1128
GlaI	GCGC	1 cut(s)	374
GluI	GCNGC	6 cut(s)	20, 195, 533, 681, 739, 742
HaeIII	GGCC	4 cut(s)	287, 575, 744, 1189
HapII	CCGG	5 cut(s)	343, 830, 848, 950, 1116
HhaI	GCGC	1 cut(s)	375
Hin1II	CATG	9 cut(s)	124, 168, 252, 412, 970, 984, 1211, 1283, 1301
Hin6I	GCGC	1 cut(s)	373
HinP1I	GCGC	1 cut(s)	373
HincII	GTYRAC	2 cut(s)	1037, 1060
HindII	GTYRAC	2 cut(s)	1037, 1060
HinfI	GANTC	6 cut(s)	266, 439, 701, 893, 988, 996
HpaII	CCGG	5 cut(s)	343, 830, 848, 950, 1116
HphI	GGTGA	4 cut(s)	635, 680, 773, 1079
Hpy166II	GTNNAC	5 cut(s)	430, 855, 1037, 1060, 1332
Hpy188I	TCNGA	6 cut(s)	83, 154, 700, 926, 1001, 1074
Hpy188III	TCNNGA	9 cut(s)	68, 121, 240, 263, 436, 474, 496, 797, 1241
Hpy8I	GTNNAC	5 cut(s)	430, 855, 1037, 1060, 1332
Hpy99I	CGWCG	2 cut(s)	276, 737
HpyAV	CCTTC	4 cut(s)	239, 502, 586, 614
HpyCH4III	ACNGT	5 cut(s)	427, 517, 569, 1166, 1316
HpyF10VI	GCNNNNNNNGC	1 cut(s)	225
HpyF3I	CTNAG	4 cut(s)	23, 554, 975, 1094
Hsp92II	CATG	9 cut(s)	124, 168, 252, 412, 970, 984, 1211, 1283, 1301
HspAI	GCGC	1 cut(s)	373
KroI	GCCGGC	1 cut(s)	949
KroNI	GCCGGC	1 cut(s)	951
Ksp22I	TGATCA	2 cut(s)	405, 799
Kzo9I	GATC	7 cut(s)	64, 78, 405, 476, 799, 1069, 1304
LmnI	GCTCC	3 cut(s)	101, 471, 1272
Lsp1109I	GCAGC	3 cut(s)	6, 544, 667
LweI	GCATC	5 cut(s)	453, 704, 908, 1284, 1303
MabI	ACCWGGT	1 cut(s)	524
MaeI	CTAG	6 cut(s)	110, 369, 549, 791, 884, 1128
MaeIII	GTNAC	3 cut(s)	1019, 1139, 1241
MalI	GATC	7 cut(s)	66, 80, 407, 478, 801, 1071, 1306
MboI	GATC	7 cut(s)	64, 78, 405, 476, 799, 1069, 1304
MboII	GAAGA	7 cut(s)	71, 74, 86, 125, 638, 824, 1104
MfeI	CAATTG	1 cut(s)	390
MflI	RGATCY	2 cut(s)	476, 1304
MhlI	GDGCHC	1 cut(s)	457
MlsI	TGGCCA	1 cut(s)	1189
MluCI	AATT	9 cut(s)	104, 129, 255, 377, 390, 804, 1151, 1235, 1319
MluNI	TGGCCA	1 cut(s)	1189
MlyI	GAGTC	1 cut(s)	982
MmeI	TCCRAC	1 cut(s)	993
Mox20I	TGGCCA	1 cut(s)	1189
MroNI	GCCGGC	1 cut(s)	949
MscI	TGGCCA	1 cut(s)	1189
MseI	TTAA	4 cut(s)	306, 707, 945, 1029
MslI	CAYNNNNRTG	2 cut(s)	142, 1212
Msp20I	TGGCCA	1 cut(s)	1189
MspA1I	CMGCKG	1 cut(s)	197
MspCI	CTTAAG	1 cut(s)	944
MspI	CCGG	5 cut(s)	343, 830, 848, 950, 1116
MspR9I	CCNGG	2 cut(s)	526, 831
MunI	CAATTG	1 cut(s)	390
MvaI	CCWGG	1 cut(s)	526
MwoI	GCNNNNNNNGC	1 cut(s)	225
NaeI	GCCGGC	1 cut(s)	951
NciI	CCSGG	1 cut(s)	831
NcoI	CCATGG	1 cut(s)	248
NdeI	CATATG	1 cut(s)	727
NdeII	GATC	7 cut(s)	64, 78, 405, 476, 799, 1069, 1304
NgoMIV	GCCGGC	1 cut(s)	949
NheI	GCTAGC	1 cut(s)	548
NlaIII	CATG	9 cut(s)	124, 168, 252, 412, 970, 984, 1211, 1283, 1301
NlaIV	GGNNCC	2 cut(s)	454, 478
NmuCI	GTSAC	2 cut(s)	1139, 1241
NspV	TTCGAA	2 cut(s)	810, 1155
PaeR7I	CTCGAG	1 cut(s)	638
PagI	TCATGA	1 cut(s)	120
PcsI	WCGNNNNNNNCGW	1 cut(s)	660
PdiI	GCCGGC	1 cut(s)	951
PfeI	GAWTC	5 cut(s)	266, 439, 701, 893, 996
PkrI	GCNGC	6 cut(s)	21, 196, 534, 682, 740, 743
PleI	GAGTC	1 cut(s)	982
PpsI	GAGTC	1 cut(s)	982
PsiI	TTATAA	1 cut(s)	776
Psp6I	CCWGG	1 cut(s)	524
PspGI	CCWGG	1 cut(s)	524
PspN4I	GGNNCC	2 cut(s)	454, 478
PspPI	GGNCC	4 cut(s)	285, 603, 743, 1124
PspXI	VCTCGAGB	1 cut(s)	638
PstI	CTGCAG	1 cut(s)	1139
PsuI	RGATCY	2 cut(s)	476, 1304
RsaI	GTAC	2 cut(s)	519, 846
RsaNI	GTAC	2 cut(s)	518, 845
RseI	CAYNNNNRTG	2 cut(s)	142, 1212
SalI	GTCGAC	2 cut(s)	1035, 1058
SaqAI	TTAA	4 cut(s)	306, 707, 945, 1029
SatI	GCNGC	6 cut(s)	20, 195, 533, 681, 739, 742
Sau3AI	GATC	7 cut(s)	64, 78, 405, 476, 799, 1069, 1304
Sau96I	GGNCC	4 cut(s)	285, 603, 743, 1124
SchI	GAGTC	1 cut(s)	982
ScrFI	CCNGG	2 cut(s)	526, 831
SduI	GDGCHC	1 cut(s)	457
SexAI	ACCWGGT	1 cut(s)	524
SfaNI	GCATC	5 cut(s)	453, 704, 908, 1284, 1303
SfcI	CTRYAG	1 cut(s)	1135
Sfr274I	CTCGAG	1 cut(s)	638
SfuI	TTCGAA	2 cut(s)	810, 1155
SinI	GGWCC	2 cut(s)	603, 1124
SlaI	CTCGAG	1 cut(s)	638
SmiMI	CAYNNNNRTG	2 cut(s)	142, 1212
SmlI	CTYRAG	3 cut(s)	638, 944, 990
SmoI	CTYRAG	3 cut(s)	638, 944, 990
Sse9I	AATT	9 cut(s)	104, 129, 255, 377, 390, 804, 1151, 1235, 1319
SsiI	CCGC	4 cut(s)	5, 195, 738, 741
SspMI	CTAG	6 cut(s)	110, 369, 549, 791, 884, 1128
StyD4I	CCNGG	2 cut(s)	524, 829
StyI	CCWWGG	3 cut(s)	99, 248, 1063
TaaI	ACNGT	5 cut(s)	427, 517, 569, 1166, 1316
TaqI	TCGA	9 cut(s)	241, 639, 654, 663, 810, 963, 1036, 1059, 1155
TasI	AATT	9 cut(s)	104, 129, 255, 377, 390, 804, 1151, 1235, 1319
TauI	GCSGC	3 cut(s)	197, 741, 744
TfiI	GAWTC	5 cut(s)	266, 439, 701, 893, 996
Tru1I	TTAA	4 cut(s)	306, 707, 945, 1029
Tru9I	TTAA	4 cut(s)	306, 707, 945, 1029
TscAI	CASTG	2 cut(s)	333, 1144
TseFI	GTSAC	2 cut(s)	1139, 1241
TseI	GCWGC	3 cut(s)	19, 532, 680
Tsp45I	GTSAC	2 cut(s)	1139, 1241
TspDTI	ATGAA	5 cut(s)	87, 153, 476, 648, 714
TspGWI	ACGGA	1 cut(s)	605
TspRI	CASTG	2 cut(s)	333, 1144
Vha464I	CTTAAG	1 cut(s)	944
VpaK11BI	GGWCC	2 cut(s)	603, 1124
XapI	RAATTY	4 cut(s)	104, 804, 1151, 1235
XhoI	CTCGAG	1 cut(s)	638
XmiI	GTMKAC	3 cut(s)	429, 1036, 1059
XspI	CTAG	6 cut(s)	110, 369, 549, 791, 884, 1128

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.