Divergent CCT motif
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 360 |
| AcsI | RAATTY | 1 cut(s) | 355 |
| AfaI | GTAC | 1 cut(s) | 65 |
| AflIII | ACRYGT | 1 cut(s) | 60 |
| AgsI | TTSAA | 5 cut(s) | 113, 236, 270, 326, 355 |
| AjnI | CCWGG | 1 cut(s) | 30 |
| AluBI | AGCT | 1 cut(s) | 14 |
| AluI | AGCT | 1 cut(s) | 14 |
| AoxI | GGCC | 4 cut(s) | 91, 101, 360, 545 |
| ApeKI | GCWGC | 1 cut(s) | 75 |
| ApoI | RAATTY | 1 cut(s) | 355 |
| AspS9I | GGNCC | 3 cut(s) | 92, 207, 545 |
| AsuII | TTCGAA | 1 cut(s) | 439 |
| AvaII | GGWCC | 1 cut(s) | 207 |
| BanII | GRGCYC | 2 cut(s) | 500, 589 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 265, 297, 324, 356 |
| BbsI | GAAGAC | 1 cut(s) | 420 |
| BbvI | GCAGC | 1 cut(s) | 87 |
| BccI | CCATC | 3 cut(s) | 301, 500, 589 |
| BciT130I | CCWGG | 1 cut(s) | 32 |
| BclI | TGATCA | 1 cut(s) | 51 |
| BfaI | CTAG | 2 cut(s) | 260, 371 |
| BisI | GCNGC | 1 cut(s) | 76 |
| BlsI | GCNGC | 1 cut(s) | 77 |
| Bme1390I | CCNGG | 1 cut(s) | 32 |
| Bme18I | GGWCC | 1 cut(s) | 207 |
| BmgT120I | GGNCC | 3 cut(s) | 92, 207, 545 |
| BmrFI | CCNGG | 1 cut(s) | 32 |
| BmsI | GCATC | 1 cut(s) | 14 |
| BpiI | GAAGAC | 1 cut(s) | 420 |
| Bpu14I | TTCGAA | 1 cut(s) | 439 |
| BpuEI | CTTGAG | 1 cut(s) | 416 |
| BsaAI | YACGTR | 2 cut(s) | 470, 559 |
| BseBI | CCWGG | 1 cut(s) | 32 |
| BseMII | CTCAG | 3 cut(s) | 62, 513, 602 |
| BseX3I | CGGCCG | 1 cut(s) | 360 |
| BseXI | GCAGC | 1 cut(s) | 87 |
| Bsh1285I | CGRYCG | 1 cut(s) | 363 |
| BshFI | GGCC | 4 cut(s) | 93, 103, 362, 547 |
| BsiEI | CGRYCG | 1 cut(s) | 363 |
| BsnI | GGCC | 4 cut(s) | 93, 103, 362, 547 |
| Bsp119I | TTCGAA | 1 cut(s) | 439 |
| Bsp1286I | GDGCHC | 2 cut(s) | 500, 589 |
| Bsp143I | GATC | 1 cut(s) | 51 |
| BspANI | GGCC | 4 cut(s) | 93, 103, 362, 547 |
| BspCNI | CTCAG | 3 cut(s) | 63, 512, 601 |
| BspT104I | TTCGAA | 1 cut(s) | 439 |
| BssMI | GATC | 1 cut(s) | 51 |
| Bst2UI | CCWGG | 1 cut(s) | 32 |
| Bst4CI | ACNGT | 4 cut(s) | 286, 404, 489, 578 |
| Bst6I | CTCTTC | 1 cut(s) | 436 |
| BstBAI | YACGTR | 2 cut(s) | 470, 559 |
| BstBI | TTCGAA | 1 cut(s) | 439 |
| BstC8I | GCNNGC | 2 cut(s) | 105, 549 |
| BstDEI | CTNAG | 4 cut(s) | 71, 376, 499, 588 |
| BstKTI | GATC | 1 cut(s) | 54 |
| BstMBI | GATC | 1 cut(s) | 51 |
| BstMCI | CGRYCG | 1 cut(s) | 363 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 104, 180, 553 |
| BstNI | CCWGG | 1 cut(s) | 32 |
| BstNSI | RCATGY | 1 cut(s) | 64 |
| BstSCI | CCNGG | 1 cut(s) | 30 |
| BstV1I | GCAGC | 1 cut(s) | 87 |
| BstV2I | GAAGAC | 1 cut(s) | 420 |
| BstZI | CGGCCG | 1 cut(s) | 360 |
| BsuRI | GGCC | 4 cut(s) | 93, 103, 362, 547 |
| Cac8I | GCNNGC | 2 cut(s) | 105, 549 |
| Cfr13I | GGNCC | 3 cut(s) | 92, 207, 545 |
| CseI | GACGC | 1 cut(s) | 239 |
| Csp6I | GTAC | 1 cut(s) | 64 |
| CviAII | CATG | 3 cut(s) | 61, 123, 553 |
| CviQI | GTAC | 1 cut(s) | 64 |
| DdeI | CTNAG | 4 cut(s) | 71, 376, 499, 588 |
| DpnI | GATC | 1 cut(s) | 53 |
| DpnII | GATC | 1 cut(s) | 51 |
| EaeI | YGGCCR | 1 cut(s) | 360 |
| EagI | CGGCCG | 1 cut(s) | 360 |
| Eam1104I | CTCTTC | 1 cut(s) | 436 |
| EarI | CTCTTC | 1 cut(s) | 436 |
| EclXI | CGGCCG | 1 cut(s) | 360 |
| Eco24I | GRGCYC | 2 cut(s) | 500, 589 |
| Eco47I | GGWCC | 1 cut(s) | 207 |
| Eco52I | CGGCCG | 1 cut(s) | 360 |
| EcoRI | GAATTC | 1 cut(s) | 355 |
| EcoRII | CCWGG | 1 cut(s) | 30 |
| EcoT38I | GRGCYC | 2 cut(s) | 500, 589 |
| FaeI | CATG | 3 cut(s) | 64, 126, 556 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 35 |
| FatI | CATG | 3 cut(s) | 60, 122, 552 |
| FbaI | TGATCA | 1 cut(s) | 51 |
| Fnu4HI | GCNGC | 1 cut(s) | 76 |
| FriOI | GRGCYC | 2 cut(s) | 500, 589 |
| Fsp4HI | GCNGC | 1 cut(s) | 76 |
| FspBI | CTAG | 2 cut(s) | 260, 371 |
| GluI | GCNGC | 1 cut(s) | 76 |
| HaeIII | GGCC | 4 cut(s) | 93, 103, 362, 547 |
| HgaI | GACGC | 1 cut(s) | 239 |
| Hin1II | CATG | 3 cut(s) | 64, 126, 556 |
| HincII | GTYRAC | 1 cut(s) | 159 |
| HindII | GTYRAC | 1 cut(s) | 159 |
| HindIII | AAGCTT | 1 cut(s) | 12 |
| HinfI | GANTC | 3 cut(s) | 266, 276, 420 |
| HpaI | GTTAAC | 1 cut(s) | 159 |
| Hpy166II | GTNNAC | 1 cut(s) | 159 |
| Hpy188I | TCNGA | 2 cut(s) | 300, 526 |
| Hpy188III | TCNNGA | 4 cut(s) | 221, 270, 352, 371 |
| Hpy8I | GTNNAC | 1 cut(s) | 159 |
| HpyAV | CCTTC | 1 cut(s) | 37 |
| HpyCH4III | ACNGT | 4 cut(s) | 286, 404, 489, 578 |
| HpyCH4IV | ACGT | 2 cut(s) | 469, 558 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 98, 140, 556 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 104, 180, 553 |
| HpyF3I | CTNAG | 4 cut(s) | 71, 376, 499, 588 |
| HpySE526I | ACGT | 2 cut(s) | 469, 558 |
| Hsp92II | CATG | 3 cut(s) | 64, 126, 556 |
| Ksp22I | TGATCA | 1 cut(s) | 51 |
| KspAI | GTTAAC | 1 cut(s) | 159 |
| Kzo9I | GATC | 1 cut(s) | 51 |
| Lsp1109I | GCAGC | 1 cut(s) | 87 |
| LweI | GCATC | 1 cut(s) | 14 |
| MaeI | CTAG | 2 cut(s) | 260, 371 |
| MaeII | ACGT | 2 cut(s) | 469, 558 |
| MaeIII | GTNAC | 1 cut(s) | 331 |
| MalI | GATC | 1 cut(s) | 53 |
| MboI | GATC | 1 cut(s) | 51 |
| MboII | GAAGA | 7 cut(s) | 78, 209, 285, 392, 425, 453, 458 |
| MhlI | GDGCHC | 2 cut(s) | 500, 589 |
| MluCI | AATT | 4 cut(s) | 82, 227, 355, 527 |
| MlyI | GAGTC | 1 cut(s) | 429 |
| MnlI | CCTC | 3 cut(s) | 33, 89, 440 |
| MseI | TTAA | 1 cut(s) | 158 |
| MslI | CAYNNNNRTG | 2 cut(s) | 22, 316 |
| MspR9I | CCNGG | 1 cut(s) | 32 |
| MvaI | CCWGG | 1 cut(s) | 32 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 104, 180, 553 |
| NdeII | GATC | 1 cut(s) | 51 |
| NlaIII | CATG | 3 cut(s) | 64, 126, 556 |
| NmeAIII | GCCGAG | 1 cut(s) | 388 |
| NspI | RCATGY | 1 cut(s) | 64 |
| NspV | TTCGAA | 1 cut(s) | 439 |
| PciI | ACATGT | 1 cut(s) | 60 |
| PfeI | GAWTC | 2 cut(s) | 266, 276 |
| PflFI | GACNNNGTC | 1 cut(s) | 419 |
| PkrI | GCNGC | 1 cut(s) | 77 |
| PleI | GAGTC | 1 cut(s) | 428 |
| PpsI | GAGTC | 1 cut(s) | 428 |
| Ppu21I | YACGTR | 2 cut(s) | 470, 559 |
| PscI | ACATGT | 1 cut(s) | 60 |
| Psp6I | CCWGG | 1 cut(s) | 30 |
| PspGI | CCWGG | 1 cut(s) | 30 |
| PspPI | GGNCC | 3 cut(s) | 92, 207, 545 |
| PsyI | GACNNNGTC | 1 cut(s) | 419 |
| RsaI | GTAC | 1 cut(s) | 65 |
| RsaNI | GTAC | 1 cut(s) | 64 |
| RseI | CAYNNNNRTG | 2 cut(s) | 22, 316 |
| SaqAI | TTAA | 1 cut(s) | 158 |
| SatI | GCNGC | 1 cut(s) | 76 |
| Sau3AI | GATC | 1 cut(s) | 51 |
| Sau96I | GGNCC | 3 cut(s) | 92, 207, 545 |
| SchI | GAGTC | 1 cut(s) | 429 |
| ScrFI | CCNGG | 1 cut(s) | 32 |
| SduI | GDGCHC | 2 cut(s) | 500, 589 |
| SetI | ASST | 6 cut(s) | 16, 206, 309, 432, 472, 561 |
| SfaNI | GCATC | 1 cut(s) | 14 |
| SfuI | TTCGAA | 1 cut(s) | 439 |
| SinI | GGWCC | 1 cut(s) | 207 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 22, 316 |
| SmlI | CTYRAG | 1 cut(s) | 431 |
| SmoI | CTYRAG | 1 cut(s) | 431 |
| Sse9I | AATT | 4 cut(s) | 82, 227, 355, 527 |
| SspMI | CTAG | 2 cut(s) | 260, 371 |
| StyD4I | CCNGG | 1 cut(s) | 30 |
| TaaI | ACNGT | 4 cut(s) | 286, 404, 489, 578 |
| TaiI | ACGT | 2 cut(s) | 472, 561 |
| TaqI | TCGA | 3 cut(s) | 22, 264, 439 |
| TasI | AATT | 4 cut(s) | 82, 227, 355, 527 |
| TfiI | GAWTC | 2 cut(s) | 266, 276 |
| Tru1I | TTAA | 1 cut(s) | 158 |
| Tru9I | TTAA | 1 cut(s) | 158 |
| TseI | GCWGC | 1 cut(s) | 75 |
| TspDTI | ATGAA | 2 cut(s) | 182, 240 |
| Tth111I | GACNNNGTC | 1 cut(s) | 419 |
| VpaK11BI | GGWCC | 1 cut(s) | 207 |
| XapI | RAATTY | 1 cut(s) | 355 |
| XbaI | TCTAGA | 1 cut(s) | 370 |
| XceI | RCATGY | 1 cut(s) | 64 |
| XspI | CTAG | 2 cut(s) | 260, 371 |