Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 560 |
| AarI | CACCTGC | 1 cut(s) | 228 |
| Acc36I | ACCTGC | 1 cut(s) | 228 |
| Acc65I | GGTACC | 1 cut(s) | 516 |
| AccB1I | GGYRCC | 1 cut(s) | 516 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 230 |
| AciI | CCGC | 2 cut(s) | 144, 860 |
| AcoI | YGGCCR | 1 cut(s) | 355 |
| AcsI | RAATTY | 2 cut(s) | 310, 431 |
| AcuI | CTGAAG | 1 cut(s) | 468 |
| AfaI | GTAC | 2 cut(s) | 413, 518 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 230 |
| AgsI | TTSAA | 1 cut(s) | 752 |
| Alw26I | GTCTC | 2 cut(s) | 11, 338 |
| Ama87I | CYCGRG | 1 cut(s) | 284 |
| AoxI | GGCC | 4 cut(s) | 183, 355, 416, 468 |
| ApoI | RAATTY | 2 cut(s) | 310, 431 |
| Asp718I | GGTACC | 1 cut(s) | 516 |
| AspS9I | GGNCC | 4 cut(s) | 288, 333, 416, 468 |
| AsuC2I | CCSGG | 1 cut(s) | 169 |
| AsuHPI | GGTGA | 3 cut(s) | 209, 638, 671 |
| AsuII | TTCGAA | 1 cut(s) | 503 |
| AvaI | CYCGRG | 1 cut(s) | 284 |
| AvaII | GGWCC | 2 cut(s) | 288, 333 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 508, 541 |
| BalI | TGGCCA | 1 cut(s) | 357 |
| BanI | GGYRCC | 1 cut(s) | 516 |
| BccI | CCATC | 4 cut(s) | 347, 601, 640, 749 |
| BceAI | ACGGC | 1 cut(s) | 472 |
| BciVI | GTATCC | 1 cut(s) | 504 |
| BclI | TGATCA | 1 cut(s) | 385 |
| BcnI | CCSGG | 1 cut(s) | 169 |
| BcoDI | GTCTC | 2 cut(s) | 11, 338 |
| BfaI | CTAG | 2 cut(s) | 465, 527 |
| BfuAI | ACCTGC | 1 cut(s) | 228 |
| BfuI | GTATCC | 1 cut(s) | 504 |
| BisI | GCNGC | 1 cut(s) | 144 |
| BlsI | GCNGC | 1 cut(s) | 145 |
| Bme1390I | CCNGG | 1 cut(s) | 169 |
| Bme18I | GGWCC | 2 cut(s) | 288, 333 |
| BmeT110I | CYCGRG | 1 cut(s) | 284 |
| BmgT120I | GGNCC | 4 cut(s) | 288, 333, 416, 468 |
| BmiI | GGNNCC | 3 cut(s) | 289, 335, 518 |
| BmrFI | CCNGG | 1 cut(s) | 169 |
| BmsI | GCATC | 4 cut(s) | 442, 551, 738, 804 |
| BpmI | CTGGAG | 1 cut(s) | 642 |
| Bpu14I | TTCGAA | 1 cut(s) | 503 |
| BpuMI | CCSGG | 1 cut(s) | 169 |
| BsaI | GGTCTC | 1 cut(s) | 338 |
| BsaJI | CCNNGG | 7 cut(s) | 201, 224, 283, 546, 655, 780, 866 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 26, 39, 56, 69, 264, 294 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 230 |
| Bse118I | RCCGGY | 2 cut(s) | 418, 833 |
| Bse1I | ACTGG | 2 cut(s) | 432, 625 |
| BseDI | CCNNGG | 7 cut(s) | 201, 224, 283, 546, 655, 780, 866 |
| BseGI | GGATG | 4 cut(s) | 410, 542, 585, 862 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 230 |
| BseMII | CTCAG | 1 cut(s) | 668 |
| BseNI | ACTGG | 2 cut(s) | 432, 625 |
| BseRI | GAGGAG | 2 cut(s) | 181, 272 |
| BshFI | GGCC | 4 cut(s) | 185, 357, 418, 470 |
| BshNI | GGYRCC | 1 cut(s) | 516 |
| BsiHKCI | CYCGRG | 1 cut(s) | 284 |
| BsiSI | CCGG | 4 cut(s) | 168, 182, 419, 834 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 230 |
| BsmAI | GTCTC | 2 cut(s) | 11, 338 |
| BsmBI | CGTCTC | 1 cut(s) | 11 |
| BsnI | GGCC | 4 cut(s) | 185, 357, 418, 470 |
| Bso31I | GGTCTC | 1 cut(s) | 338 |
| BsoBI | CYCGRG | 1 cut(s) | 284 |
| Bsp119I | TTCGAA | 1 cut(s) | 503 |
| Bsp143I | GATC | 4 cut(s) | 36, 303, 385, 745 |
| Bsp19I | CCATGG | 2 cut(s) | 201, 224 |
| BspACI | CCGC | 2 cut(s) | 144, 860 |
| BspANI | GGCC | 4 cut(s) | 185, 357, 418, 470 |
| BspCNI | CTCAG | 1 cut(s) | 669 |
| BspLI | GGNNCC | 3 cut(s) | 289, 335, 518 |
| BspMI | ACCTGC | 1 cut(s) | 228 |
| BspQI | GCTCTTC | 1 cut(s) | 219 |
| BspT104I | TTCGAA | 1 cut(s) | 503 |
| BspT107I | GGYRCC | 1 cut(s) | 516 |
| BspTNI | GGTCTC | 1 cut(s) | 338 |
| BsrFI | RCCGGY | 2 cut(s) | 418, 833 |
| BsrI | ACTGG | 2 cut(s) | 432, 625 |
| BssAI | RCCGGY | 2 cut(s) | 418, 833 |
| BssECI | CCNNGG | 7 cut(s) | 201, 224, 283, 546, 655, 780, 866 |
| BssMI | GATC | 4 cut(s) | 36, 303, 385, 745 |
| BssT1I | CCWWGG | 5 cut(s) | 201, 224, 546, 655, 780 |
| Bst4CI | ACNGT | 2 cut(s) | 238, 516 |
| Bst6I | CTCTTC | 1 cut(s) | 219 |
| BstBI | TTCGAA | 1 cut(s) | 503 |
| BstC8I | GCNNGC | 3 cut(s) | 141, 187, 835 |
| BstDEI | CTNAG | 3 cut(s) | 566, 572, 677 |
| BstDSI | CCRYGG | 3 cut(s) | 201, 224, 866 |
| BstF5I | GGATG | 4 cut(s) | 410, 542, 585, 862 |
| BstKTI | GATC | 4 cut(s) | 39, 306, 388, 748 |
| BstMAI | GTCTC | 2 cut(s) | 11, 338 |
| BstMBI | GATC | 4 cut(s) | 36, 303, 385, 745 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 126, 687 |
| BstSCI | CCNGG | 1 cut(s) | 167 |
| BsuI | GTATCC | 1 cut(s) | 504 |
| BsuRI | GGCC | 4 cut(s) | 185, 357, 418, 470 |
| BtgI | CCRYGG | 3 cut(s) | 201, 224, 866 |
| BtsCI | GGATG | 4 cut(s) | 410, 542, 585, 862 |
| BveI | ACCTGC | 1 cut(s) | 228 |
| Cac8I | GCNNGC | 3 cut(s) | 141, 187, 835 |
| Cfr10I | RCCGGY | 2 cut(s) | 418, 833 |
| Cfr13I | GGNCC | 4 cut(s) | 288, 333, 416, 468 |
| Csp6I | GTAC | 2 cut(s) | 412, 517 |
| CviAII | CATG | 5 cut(s) | 202, 225, 255, 330, 767 |
| CviQI | GTAC | 2 cut(s) | 412, 517 |
| DdeI | CTNAG | 3 cut(s) | 566, 572, 677 |
| DpnI | GATC | 4 cut(s) | 38, 305, 387, 747 |
| DpnII | GATC | 4 cut(s) | 36, 303, 385, 745 |
| EaeI | YGGCCR | 1 cut(s) | 355 |
| Eam1104I | CTCTTC | 1 cut(s) | 219 |
| EarI | CTCTTC | 1 cut(s) | 219 |
| Eco130I | CCWWGG | 5 cut(s) | 201, 224, 546, 655, 780 |
| Eco31I | GGTCTC | 1 cut(s) | 338 |
| Eco32I | GATATC | 1 cut(s) | 67 |
| Eco47I | GGWCC | 2 cut(s) | 288, 333 |
| Eco57I | CTGAAG | 1 cut(s) | 468 |
| Eco88I | CYCGRG | 1 cut(s) | 284 |
| EcoRV | GATATC | 1 cut(s) | 67 |
| EcoT14I | CCWWGG | 5 cut(s) | 201, 224, 546, 655, 780 |
| EcoT22I | ATGCAT | 1 cut(s) | 98 |
| ErhI | CCWWGG | 5 cut(s) | 201, 224, 546, 655, 780 |
| Esp3I | CGTCTC | 1 cut(s) | 11 |
| FaeI | CATG | 5 cut(s) | 205, 228, 258, 333, 770 |
| FatI | CATG | 5 cut(s) | 201, 224, 254, 329, 766 |
| FbaI | TGATCA | 1 cut(s) | 385 |
| Fnu4HI | GCNGC | 1 cut(s) | 144 |
| FokI | GGATG | 4 cut(s) | 417, 529, 592, 849 |
| Fsp4HI | GCNGC | 1 cut(s) | 144 |
| FspBI | CTAG | 2 cut(s) | 465, 527 |
| GluI | GCNGC | 1 cut(s) | 144 |
| GsuI | CTGGAG | 1 cut(s) | 642 |
| HaeIII | GGCC | 4 cut(s) | 185, 357, 418, 470 |
| HapII | CCGG | 4 cut(s) | 168, 182, 419, 834 |
| Hin1II | CATG | 5 cut(s) | 205, 228, 258, 333, 770 |
| HinfI | GANTC | 3 cut(s) | 54, 246, 591 |
| HpaII | CCGG | 4 cut(s) | 168, 182, 419, 834 |
| HphI | GGTGA | 3 cut(s) | 209, 638, 671 |
| Hpy166II | GTNNAC | 2 cut(s) | 808, 855 |
| Hpy188I | TCNGA | 7 cut(s) | 103, 303, 308, 390, 448, 596, 678 |
| Hpy188III | TCNNGA | 1 cut(s) | 749 |
| Hpy8I | GTNNAC | 2 cut(s) | 808, 855 |
| HpyAV | CCTTC | 2 cut(s) | 25, 269 |
| HpyCH4III | ACNGT | 2 cut(s) | 238, 516 |
| HpyCH4V | TGCA | 5 cut(s) | 73, 96, 542, 639, 729 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 126, 687 |
| HpyF3I | CTNAG | 3 cut(s) | 566, 572, 677 |
| Hsp92II | CATG | 5 cut(s) | 205, 228, 258, 333, 770 |
| KpnI | GGTACC | 1 cut(s) | 520 |
| KroI | GCCGGC | 1 cut(s) | 833 |
| KroNI | GCCGGC | 1 cut(s) | 835 |
| Ksp22I | TGATCA | 1 cut(s) | 385 |
| Kzo9I | GATC | 4 cut(s) | 36, 303, 385, 745 |
| LguI | GCTCTTC | 1 cut(s) | 219 |
| LmnI | GCTCC | 2 cut(s) | 194, 792 |
| LweI | GCATC | 4 cut(s) | 442, 551, 738, 804 |
| MaeI | CTAG | 2 cut(s) | 465, 527 |
| MaeIII | GTNAC | 4 cut(s) | 45, 460, 646, 821 |
| MalI | GATC | 4 cut(s) | 38, 305, 387, 747 |
| MboI | GATC | 4 cut(s) | 36, 303, 385, 745 |
| MboII | GAAGA | 4 cut(s) | 40, 206, 461, 764 |
| MfeI | CAATTG | 1 cut(s) | 74 |
| MlsI | TGGCCA | 1 cut(s) | 357 |
| MluCI | AATT | 8 cut(s) | 74, 310, 381, 392, 431, 478, 551, 561 |
| MluNI | TGGCCA | 1 cut(s) | 357 |
| MlyI | GAGTC | 1 cut(s) | 48 |
| MmeI | TCCRAC | 2 cut(s) | 382, 557 |
| MnlI | CCTC | 8 cut(s) | 149, 189, 202, 293, 347, 531, 617, 637 |
| Mox20I | TGGCCA | 1 cut(s) | 357 |
| Mph1103I | ATGCAT | 1 cut(s) | 98 |
| MroNI | GCCGGC | 1 cut(s) | 833 |
| MscI | TGGCCA | 1 cut(s) | 357 |
| Msp20I | TGGCCA | 1 cut(s) | 357 |
| MspA1I | CMGCKG | 1 cut(s) | 146 |
| MspI | CCGG | 4 cut(s) | 168, 182, 419, 834 |
| MspR9I | CCNGG | 1 cut(s) | 169 |
| MunI | CAATTG | 1 cut(s) | 74 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 126, 687 |
| NaeI | GCCGGC | 1 cut(s) | 835 |
| NciI | CCSGG | 1 cut(s) | 169 |
| NcoI | CCATGG | 2 cut(s) | 201, 224 |
| NdeII | GATC | 4 cut(s) | 36, 303, 385, 745 |
| NgoMIV | GCCGGC | 1 cut(s) | 833 |
| NlaIII | CATG | 5 cut(s) | 205, 228, 258, 333, 770 |
| NlaIV | GGNNCC | 3 cut(s) | 289, 335, 518 |
| NmuCI | GTSAC | 2 cut(s) | 45, 460 |
| NsiI | ATGCAT | 1 cut(s) | 98 |
| NspV | TTCGAA | 1 cut(s) | 503 |
| PaqCI | CACCTGC | 1 cut(s) | 228 |
| PciSI | GCTCTTC | 1 cut(s) | 219 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 520 |
| PdiI | GCCGGC | 1 cut(s) | 835 |
| PfeI | GAWTC | 2 cut(s) | 246, 591 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 230 |
| PkrI | GCNGC | 1 cut(s) | 145 |
| PleI | GAGTC | 1 cut(s) | 48 |
| PpsI | GAGTC | 1 cut(s) | 48 |
| PsiI | TTATAA | 1 cut(s) | 560 |
| PspN4I | GGNNCC | 3 cut(s) | 289, 335, 518 |
| PspPI | GGNCC | 4 cut(s) | 288, 333, 416, 468 |
| RsaI | GTAC | 2 cut(s) | 413, 518 |
| RsaNI | GTAC | 2 cut(s) | 412, 517 |
| SapI | GCTCTTC | 1 cut(s) | 219 |
| SatI | GCNGC | 1 cut(s) | 144 |
| Sau3AI | GATC | 4 cut(s) | 36, 303, 385, 745 |
| Sau96I | GGNCC | 4 cut(s) | 288, 333, 416, 468 |
| SchI | GAGTC | 1 cut(s) | 48 |
| ScrFI | CCNGG | 1 cut(s) | 169 |
| SetI | ASST | 7 cut(s) | 44, 160, 222, 628, 648, 657, 699 |
| SfaNI | GCATC | 4 cut(s) | 442, 551, 738, 804 |
| SfuI | TTCGAA | 1 cut(s) | 503 |
| SinI | GGWCC | 2 cut(s) | 288, 333 |
| Sse9I | AATT | 8 cut(s) | 74, 310, 381, 392, 431, 478, 551, 561 |
| SsiI | CCGC | 2 cut(s) | 144, 860 |
| SspMI | CTAG | 2 cut(s) | 465, 527 |
| StyD4I | CCNGG | 1 cut(s) | 167 |
| StyI | CCWWGG | 5 cut(s) | 201, 224, 546, 655, 780 |
| TaaI | ACNGT | 2 cut(s) | 238, 516 |
| TaqI | TCGA | 2 cut(s) | 503, 798 |
| TasI | AATT | 8 cut(s) | 74, 310, 381, 392, 431, 478, 551, 561 |
| TauI | GCSGC | 1 cut(s) | 146 |
| TfiI | GAWTC | 2 cut(s) | 246, 591 |
| TseFI | GTSAC | 2 cut(s) | 45, 460 |
| Tsp45I | GTSAC | 2 cut(s) | 45, 460 |
| TspGWI | ACGGA | 2 cut(s) | 29, 855 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 230 |
| VpaK11BI | GGWCC | 2 cut(s) | 288, 333 |
| XapI | RAATTY | 2 cut(s) | 310, 431 |
| XspI | CTAG | 2 cut(s) | 465, 527 |
| Zsp2I | ATGCAT | 1 cut(s) | 98 |