Rh3BG235300

F-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000142
Physical Location & Seq
Forward (+)
22036419 .. 22038047
1629 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG235300.1

Sequence Viewer

Length: 1143 bp
ATGAGTTCCAGAAGACGCCCAATGGATGACCACAACAGGTGGTCCAAGCATCTTCCTGATATATTGATTGAAATGATTGTGAAGCGTCTAACCCTAGTCGATTCAATCAGATTCGCTGCTGTGTGTCCTTCTTGGAGAAGTGTATCATCACAATGGTCTCAACGAGTAACCCGACTTCCATGGCTCTTGGATTCGACTGAGATTCTAGACTCAGAAACTGTGAATTATAGGCTCTACAGTCCAAGTGAAGACAGAGTCTACGACCTCAAGTTTCCAAGAGAAAATAATAAGTTGGATGCTTCACATAGTTATGGGATACGTTGCTTGGGCTCTATTGATGGCTGGTTGATAATGTCTGAATGGACATTGAATAATATTTCGTATGATGAGAAGTCCATCAATTATTTCTTGAACCCAATGACAGGTGATCGTATTAAGCTGCCCCAGCAGACCGAATTCATCCCAGAGACATCCGCAGCCTCTTCAGATCCAAGACGTTCTGATTGCATTGTTGCAATTGGAGAAGGGTCGAATTTGGTATTTTGCAGGCCATGTAGTCATGAATTATGCCCTTGGGAAGGGCACCAAGATTGTGATGTACAATACGTTAAATTTCATGAGGATGGCAAGTTATACATAATAGGATTGGGTGATACGTGTTGTATACTTGTTGTTCTTGTTCTTGTTTTAGATCCCTTAAATCAATGTCAAGGCAAAGGCAAGTGTGAGAAAATTATTGCTTATAGGGAAAAGACAATATCAGCTCCAGGGGATCCGTACAACGAAACCGTGCGGTCCTGGTCTCCATCATTTACTTGGTCCTCCAAAGGTGAGTTTTTACTGGTTTGGAGTATTTTCAGGGACGGCTTTCCATTTCAAGTGTTCAGGATAGATGATAAAAGTGGTTATAATCCTATTTGGGTGAACTTGGGGACGAATGATATTGCTGAAGACGAAGTAGTCTTTCTATCCGCCTTACACAGCACCTTAATGTCAAAGTCGAAGTCATTTATGACAACCATAGACGAGGCTTTTCTTGGACTTCATTGCGGAAAATTTTTCACCTACCTTCCCGATCGTTCGTCGACTTGTGACTTGAAGATTTTAGATTGGGTATGGTTTACGCCCAATATAACCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

380

Amino Acids

43.68

Weight (kDa)

5.57

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 17 - 50 8.8e-06 F-box domain
Beta-prop_KIB1-4 PF03478 78 - 335 2.2e-20 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000142)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 909
AasI GACNNNNNNGTC 1 cut(s) 959
AccB1I GGYRCC 1 cut(s) 582
AccI GTMKAC 3 cut(s) 258, 664, 1085
AciI CCGC 4 cut(s) 474, 793, 972, 1050
AclWI GGATC 4 cut(s) 482, 686, 767, 780
AcsI RAATTY 4 cut(s) 455, 532, 611, 1055
AcuI CTGAAG 2 cut(s) 468, 969
AcyI GRCGYC 1 cut(s) 16
AfaI GTAC 2 cut(s) 600, 779
AfiI CCNNNNNNNGG 2 cut(s) 422, 578
AflIII ACRYGT 1 cut(s) 656
AgsI TTSAA 6 cut(s) 71, 105, 370, 412, 878, 1099
AjnI CCWGG 2 cut(s) 766, 797
AluBI AGCT 2 cut(s) 439, 764
AluI AGCT 2 cut(s) 439, 764
Alw26I GTCTC 3 cut(s) 162, 461, 807
AlwI GGATC 4 cut(s) 482, 686, 767, 780
AlwNI CAGNNNCTG 1 cut(s) 218
AoxI GGCC 1 cut(s) 548
ApeKI GCWGC 3 cut(s) 116, 439, 476
ApoI RAATTY 4 cut(s) 455, 532, 611, 1055
ArsI GACNNNNNNTTYG 2 cut(s) 989, 1021
AspS9I GGNCC 3 cut(s) 42, 795, 819
AsuHPI GGTGA 5 cut(s) 437, 662, 842, 934, 1054
AvaII GGWCC 3 cut(s) 42, 795, 819
BaeGI GKGCMC 1 cut(s) 585
BamHI GGATCC 1 cut(s) 772
BanI GGYRCC 1 cut(s) 582
BanII GRGCYC 1 cut(s) 332
BarI GAAGNNNNNNTAC 2 cut(s) 159, 191
BbsI GAAGAC 3 cut(s) 19, 255, 957
BbvI GCAGC 3 cut(s) 103, 426, 488
BccI CCATC 4 cut(s) 332, 404, 617, 814
BceAI ACGGC 1 cut(s) 880
BciT130I CCWGG 2 cut(s) 768, 799
BciVI GTATCC 1 cut(s) 309
BcoDI GTCTC 3 cut(s) 162, 461, 807
BfaI CTAG 2 cut(s) 95, 206
BfmI CTRYAG 1 cut(s) 235
BfuI GTATCC 1 cut(s) 309
BisI GCNGC 3 cut(s) 117, 440, 477
BlsI GCNGC 3 cut(s) 118, 441, 478
Bme1390I CCNGG 2 cut(s) 768, 799
Bme18I GGWCC 3 cut(s) 42, 795, 819
BmgT120I GGNCC 3 cut(s) 42, 795, 819
BmiI GGNNCC 2 cut(s) 584, 774
BmrFI CCNGG 2 cut(s) 768, 799
BmsI GCATC 2 cut(s) 58, 286
BpiI GAAGAC 3 cut(s) 19, 255, 957
BpmI CTGGAG 1 cut(s) 750
BpuEI CTTGAG 1 cut(s) 251
BsaAI YACGTR 1 cut(s) 657
BsaHI GRCGYC 1 cut(s) 16
BsaI GGTCTC 2 cut(s) 162, 807
BsaJI CCNNGG 3 cut(s) 179, 572, 767
Bsc4I CCNNNNNNNGG 2 cut(s) 422, 578
Bse1I ACTGG 1 cut(s) 846
Bse3DI GCAATG 1 cut(s) 1045
BseBI CCWGG 2 cut(s) 768, 799
BseDI CCNNGG 3 cut(s) 179, 572, 767
BseGI GGATG 5 cut(s) 31, 301, 459, 470, 628
BseLI CCNNNNNNNGG 2 cut(s) 422, 578
BseMI GCAATG 1 cut(s) 1045
BseMII CTCAG 2 cut(s) 189, 225
BseNI ACTGG 1 cut(s) 846
BseSI GKGCMC 1 cut(s) 585
BseXI GCAGC 3 cut(s) 103, 426, 488
BseYI CCCAGC 1 cut(s) 444
Bsh1285I CGRYCG 1 cut(s) 1078
BshFI GGCC 1 cut(s) 550
BshNI GGYRCC 1 cut(s) 582
BsiEI CGRYCG 1 cut(s) 1078
BslFI GGGAC 2 cut(s) 875, 946
BslI CCNNNNNNNGG 2 cut(s) 422, 578
BsmAI GTCTC 3 cut(s) 162, 461, 807
BsmFI GGGAC 2 cut(s) 875, 946
BsnI GGCC 1 cut(s) 550
Bso31I GGTCTC 2 cut(s) 162, 807
Bsp1286I GDGCHC 2 cut(s) 332, 585
Bsp1407I TGTACA 1 cut(s) 598
Bsp143I GATC 5 cut(s) 427, 487, 691, 772, 1075
Bsp19I CCATGG 1 cut(s) 179
BspACI CCGC 4 cut(s) 474, 793, 972, 1050
BspANI GGCC 1 cut(s) 550
BspCNI CTCAG 2 cut(s) 190, 224
BspHI TCATGA 2 cut(s) 559, 616
BspLI GGNNCC 2 cut(s) 584, 774
BspPI GGATC 4 cut(s) 482, 686, 767, 780
BspT107I GGYRCC 1 cut(s) 582
BspTNI GGTCTC 2 cut(s) 162, 807
BsrDI GCAATG 1 cut(s) 1045
BsrGI TGTACA 1 cut(s) 598
BsrI ACTGG 1 cut(s) 846
BssECI CCNNGG 3 cut(s) 179, 572, 767
BssMI GATC 5 cut(s) 427, 487, 691, 772, 1075
BssNAI GTATAC 1 cut(s) 665
BssNI GRCGYC 1 cut(s) 16
BssT1I CCWWGG 2 cut(s) 179, 572
Bst1107I GTATAC 1 cut(s) 665
Bst2UI CCWGG 2 cut(s) 768, 799
Bst4CI ACNGT 3 cut(s) 220, 239, 790
Bst6I CTCTTC 1 cut(s) 487
BstACI GRCGYC 1 cut(s) 16
BstAUI TGTACA 1 cut(s) 598
BstBAI YACGTR 1 cut(s) 657
BstC8I GCNNGC 1 cut(s) 548
BstDEI CTNAG 2 cut(s) 198, 211
BstDSI CCRYGG 1 cut(s) 179
BstENI CCTNNNNNAGG 1 cut(s) 576
BstF5I GGATG 5 cut(s) 31, 301, 459, 470, 628
BstKTI GATC 5 cut(s) 430, 490, 694, 775, 1078
BstMAI GTCTC 3 cut(s) 162, 461, 807
BstMBI GATC 5 cut(s) 427, 487, 691, 772, 1075
BstMCI CGRYCG 1 cut(s) 1078
BstMWI GCNNNNNNNGC 1 cut(s) 445
BstNI CCWGG 2 cut(s) 768, 799
BstSCI CCNGG 2 cut(s) 766, 797
BstSFI CTRYAG 1 cut(s) 235
BstSLI GKGCMC 1 cut(s) 585
BstV1I GCAGC 3 cut(s) 103, 426, 488
BstV2I GAAGAC 3 cut(s) 19, 255, 957
BstX2I RGATCY 3 cut(s) 487, 691, 772
BstYI RGATCY 3 cut(s) 487, 691, 772
BstZ17I GTATAC 1 cut(s) 665
BsuI GTATCC 1 cut(s) 309
BsuRI GGCC 1 cut(s) 550
BtgI CCRYGG 1 cut(s) 179
BtsCI GGATG 5 cut(s) 31, 301, 459, 470, 628
Cac8I GCNNGC 1 cut(s) 548
CaiI CAGNNNCTG 1 cut(s) 218
CciI TCATGA 2 cut(s) 559, 616
Cfr13I GGNCC 3 cut(s) 42, 795, 819
CseI GACGC 2 cut(s) 24, 74
Csp6I GTAC 2 cut(s) 599, 778
CviAII CATG 4 cut(s) 180, 552, 560, 617
CviQI GTAC 2 cut(s) 599, 778
DdeI CTNAG 2 cut(s) 198, 211
DpnI GATC 5 cut(s) 429, 489, 693, 774, 1077
DpnII GATC 5 cut(s) 427, 487, 691, 772, 1075
DrdI GACNNNNNNGTC 1 cut(s) 959
DseDI GACNNNNNNGTC 1 cut(s) 959
Eam1104I CTCTTC 1 cut(s) 487
EarI CTCTTC 1 cut(s) 487
EciI GGCGGA 1 cut(s) 961
Eco130I CCWWGG 2 cut(s) 179, 572
Eco24I GRGCYC 1 cut(s) 332
Eco31I GGTCTC 2 cut(s) 162, 807
Eco47I GGWCC 3 cut(s) 42, 795, 819
Eco57I CTGAAG 2 cut(s) 468, 969
EcoNI CCTNNNNNAGG 1 cut(s) 576
EcoRI GAATTC 1 cut(s) 455
EcoRII CCWGG 2 cut(s) 766, 797
EcoT14I CCWWGG 2 cut(s) 179, 572
EcoT38I GRGCYC 1 cut(s) 332
ErhI CCWWGG 2 cut(s) 179, 572
FaeI CATG 4 cut(s) 183, 555, 563, 620
FaqI GGGAC 2 cut(s) 875, 946
FatI CATG 4 cut(s) 179, 551, 559, 616
FblI GTMKAC 3 cut(s) 258, 664, 1085
Fnu4HI GCNGC 3 cut(s) 117, 440, 477
FokI GGATG 5 cut(s) 38, 308, 446, 457, 635
FriOI GRGCYC 1 cut(s) 332
Fsp4HI GCNGC 3 cut(s) 117, 440, 477
FspBI CTAG 2 cut(s) 95, 206
GluI GCNGC 3 cut(s) 117, 440, 477
GsaI CCCAGC 1 cut(s) 448
GsuI CTGGAG 1 cut(s) 750
HaeIII GGCC 1 cut(s) 550
HgaI GACGC 2 cut(s) 24, 74
Hin1I GRCGYC 1 cut(s) 16
Hin1II CATG 4 cut(s) 183, 555, 563, 620
HincII GTYRAC 1 cut(s) 1086
HindII GTYRAC 1 cut(s) 1086
HinfI GANTC 6 cut(s) 101, 111, 191, 202, 209, 255
HphI GGTGA 5 cut(s) 437, 662, 842, 934, 1054
Hpy166II GTNNAC 5 cut(s) 259, 665, 925, 1086, 1122
Hpy188I TCNGA 5 cut(s) 110, 214, 358, 487, 502
Hpy188III TCNNGA 8 cut(s) 9, 56, 206, 409, 560, 617, 886, 1073
Hpy8I GTNNAC 5 cut(s) 259, 665, 925, 1086, 1122
Hpy99I CGWCG 1 cut(s) 1087
HpyAV CCTTC 4 cut(s) 138, 518, 572, 1079
HpyCH4III ACNGT 3 cut(s) 220, 239, 790
HpyCH4IV ACGT 4 cut(s) 319, 496, 606, 656
HpyCH4V TGCA 3 cut(s) 507, 515, 546
HpyF10VI GCNNNNNNNGC 1 cut(s) 445
HpyF3I CTNAG 2 cut(s) 198, 211
HpySE526I ACGT 4 cut(s) 319, 496, 606, 656
Hsp92I GRCGYC 1 cut(s) 16
Hsp92II CATG 4 cut(s) 183, 555, 563, 620
Kzo9I GATC 5 cut(s) 427, 487, 691, 772, 1075
LmnI GCTCC 1 cut(s) 769
Lsp1109I GCAGC 3 cut(s) 103, 426, 488
LweI GCATC 2 cut(s) 58, 286
MaeI CTAG 2 cut(s) 95, 206
MaeII ACGT 4 cut(s) 319, 496, 606, 656
MaeIII GTNAC 2 cut(s) 166, 1091
MalI GATC 5 cut(s) 429, 489, 693, 774, 1077
MboI GATC 5 cut(s) 427, 487, 691, 772, 1075
MboII GAAGA 6 cut(s) 24, 44, 260, 474, 962, 1111
MfeI CAATTG 1 cut(s) 516
MflI RGATCY 3 cut(s) 487, 691, 772
MhlI GDGCHC 2 cut(s) 332, 585
MluCI AATT 9 cut(s) 223, 400, 455, 516, 532, 563, 611, 732, 1055
MlyI GAGTC 2 cut(s) 203, 264
MmeI TCCRAC 1 cut(s) 273
MnlI CCTC 5 cut(s) 275, 490, 613, 832, 1021
MseI TTAA 4 cut(s) 435, 609, 698, 989
MslI CAYNNNNRTG 4 cut(s) 151, 309, 621, 989
MspR9I CCNGG 2 cut(s) 768, 799
MunI CAATTG 1 cut(s) 516
MvaI CCWGG 2 cut(s) 768, 799
MwoI GCNNNNNNNGC 1 cut(s) 445
NcoI CCATGG 1 cut(s) 179
NdeII GATC 5 cut(s) 427, 487, 691, 772, 1075
NlaIII CATG 4 cut(s) 183, 555, 563, 620
NlaIV GGNNCC 2 cut(s) 584, 774
NmuCI GTSAC 1 cut(s) 1091
PagI TCATGA 2 cut(s) 559, 616
PcsI WCGNNNNNNNCGW 1 cut(s) 169
PfeI GAWTC 4 cut(s) 101, 111, 191, 202
PflFI GACNNNGTC 1 cut(s) 254
PkrI GCNGC 3 cut(s) 118, 441, 478
Ple19I CGATCG 1 cut(s) 1078
PleI GAGTC 2 cut(s) 203, 263
PpsI GAGTC 2 cut(s) 203, 263
Ppu21I YACGTR 1 cut(s) 657
PsiI TTATAA 1 cut(s) 909
Psp6I CCWGG 2 cut(s) 766, 797
PspFI CCCAGC 1 cut(s) 444
PspGI CCWGG 2 cut(s) 766, 797
PspN4I GGNNCC 2 cut(s) 584, 774
PspPI GGNCC 3 cut(s) 42, 795, 819
PstNI CAGNNNCTG 1 cut(s) 218
PsuI RGATCY 3 cut(s) 487, 691, 772
PsyI GACNNNGTC 1 cut(s) 254
PvuI CGATCG 1 cut(s) 1078
RsaI GTAC 2 cut(s) 600, 779
RsaNI GTAC 2 cut(s) 599, 778
RseI CAYNNNNRTG 4 cut(s) 151, 309, 621, 989
SalI GTCGAC 1 cut(s) 1084
SaqAI TTAA 4 cut(s) 435, 609, 698, 989
SatI GCNGC 3 cut(s) 117, 440, 477
Sau3AI GATC 5 cut(s) 427, 487, 691, 772, 1075
Sau96I GGNCC 3 cut(s) 42, 795, 819
SchI GAGTC 2 cut(s) 203, 264
ScrFI CCNGG 2 cut(s) 768, 799
SduI GDGCHC 2 cut(s) 332, 585
SfaNI GCATC 2 cut(s) 58, 286
SfcI CTRYAG 1 cut(s) 235
SinI GGWCC 3 cut(s) 42, 795, 819
SmiMI CAYNNNNRTG 4 cut(s) 151, 309, 621, 989
SmlI CTYRAG 1 cut(s) 266
SmoI CTYRAG 1 cut(s) 266
Sse9I AATT 9 cut(s) 223, 400, 455, 516, 532, 563, 611, 732, 1055
SsiI CCGC 4 cut(s) 474, 793, 972, 1050
SspI AATATT 1 cut(s) 376
SspMI CTAG 2 cut(s) 95, 206
StyD4I CCNGG 2 cut(s) 766, 797
StyI CCWWGG 2 cut(s) 179, 572
TaaI ACNGT 3 cut(s) 220, 239, 790
TaiI ACGT 4 cut(s) 322, 499, 609, 659
TaqI TCGA 5 cut(s) 99, 194, 530, 1001, 1085
TaqII GACCGA 1 cut(s) 467
TasI AATT 9 cut(s) 223, 400, 455, 516, 532, 563, 611, 732, 1055
TatI WGTACW 1 cut(s) 598
TfiI GAWTC 4 cut(s) 101, 111, 191, 202
Tru1I TTAA 4 cut(s) 435, 609, 698, 989
Tru9I TTAA 4 cut(s) 435, 609, 698, 989
TseFI GTSAC 1 cut(s) 1091
TseI GCWGC 3 cut(s) 116, 439, 476
Tsp45I GTSAC 1 cut(s) 1091
TspDTI ATGAA 4 cut(s) 448, 576, 605, 1034
TspGWI ACGGA 1 cut(s) 765
Tth111I GACNNNGTC 1 cut(s) 254
VpaK11BI GGWCC 3 cut(s) 42, 795, 819
XagI CCTNNNNNAGG 1 cut(s) 576
XapI RAATTY 4 cut(s) 455, 532, 611, 1055
XbaI TCTAGA 1 cut(s) 205
XcmI CCANNNNNNNNNTGG 1 cut(s) 813
XmiI GTMKAC 3 cut(s) 258, 664, 1085
XspI CTAG 2 cut(s) 95, 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.