Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 339 |
| AccII | CGCG | 1 cut(s) | 273 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 222 |
| AluBI | AGCT | 1 cut(s) | 285 |
| AluI | AGCT | 1 cut(s) | 285 |
| Alw26I | GTCTC | 1 cut(s) | 186 |
| ApeKI | GCWGC | 3 cut(s) | 84, 87, 285 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 26, 58 |
| AspLEI | GCGC | 1 cut(s) | 340 |
| AspS9I | GGNCC | 1 cut(s) | 96 |
| AsuHPI | GGTGA | 1 cut(s) | 85 |
| AsuII | TTCGAA | 1 cut(s) | 32 |
| AvaII | GGWCC | 1 cut(s) | 96 |
| BbvI | GCAGC | 3 cut(s) | 96, 99, 272 |
| BccI | CCATC | 1 cut(s) | 13 |
| BceAI | ACGGC | 1 cut(s) | 165 |
| BcoDI | GTCTC | 1 cut(s) | 186 |
| BisI | GCNGC | 3 cut(s) | 85, 88, 286 |
| BlsI | GCNGC | 3 cut(s) | 86, 89, 287 |
| Bme18I | GGWCC | 1 cut(s) | 96 |
| BmgT120I | GGNCC | 1 cut(s) | 96 |
| BmsI | GCATC | 1 cut(s) | 325 |
| Bpu14I | TTCGAA | 1 cut(s) | 32 |
| BsaJI | CCNNGG | 1 cut(s) | 248 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 222 |
| BseDI | CCNNGG | 1 cut(s) | 248 |
| BseGI | GGATG | 1 cut(s) | 24 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 222 |
| BseMII | CTCAG | 1 cut(s) | 186 |
| BseRI | GAGGAG | 1 cut(s) | 228 |
| BseXI | GCAGC | 3 cut(s) | 96, 99, 272 |
| Bsh1236I | CGCG | 1 cut(s) | 273 |
| BslFI | GGGAC | 1 cut(s) | 92 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 222 |
| BsmAI | GTCTC | 1 cut(s) | 186 |
| BsmFI | GGGAC | 1 cut(s) | 92 |
| Bsp119I | TTCGAA | 1 cut(s) | 32 |
| Bsp143I | GATC | 1 cut(s) | 268 |
| Bsp19I | CCATGG | 1 cut(s) | 248 |
| Bsp68I | TCGCGA | 1 cut(s) | 273 |
| BspCNI | CTCAG | 1 cut(s) | 185 |
| BspFNI | CGCG | 1 cut(s) | 273 |
| BspT104I | TTCGAA | 1 cut(s) | 32 |
| BssECI | CCNNGG | 1 cut(s) | 248 |
| BssMI | GATC | 1 cut(s) | 268 |
| BssT1I | CCWWGG | 1 cut(s) | 248 |
| Bst4CI | ACNGT | 1 cut(s) | 225 |
| BstBI | TTCGAA | 1 cut(s) | 32 |
| BstDEI | CTNAG | 2 cut(s) | 45, 172 |
| BstDSI | CCRYGG | 1 cut(s) | 248 |
| BstF5I | GGATG | 1 cut(s) | 24 |
| BstFNI | CGCG | 1 cut(s) | 273 |
| BstHHI | GCGC | 1 cut(s) | 340 |
| BstKTI | GATC | 1 cut(s) | 271 |
| BstMAI | GTCTC | 1 cut(s) | 186 |
| BstMBI | GATC | 1 cut(s) | 268 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 177 |
| BstUI | CGCG | 1 cut(s) | 273 |
| BstV1I | GCAGC | 3 cut(s) | 96, 99, 272 |
| BtgI | CCRYGG | 1 cut(s) | 248 |
| BtgZI | GCGATG | 1 cut(s) | 20 |
| BtsCI | GGATG | 1 cut(s) | 24 |
| BtuMI | TCGCGA | 1 cut(s) | 273 |
| CfoI | GCGC | 1 cut(s) | 340 |
| Cfr13I | GGNCC | 1 cut(s) | 96 |
| CviAII | CATG | 4 cut(s) | 121, 186, 249, 341 |
| CviJI | RGCY | 4 cut(s) | 142, 253, 285, 301 |
| CviKI_1 | RGCY | 4 cut(s) | 142, 253, 285, 301 |
| DdeI | CTNAG | 2 cut(s) | 45, 172 |
| DpnI | GATC | 1 cut(s) | 270 |
| DpnII | GATC | 1 cut(s) | 268 |
| Eco130I | CCWWGG | 1 cut(s) | 248 |
| Eco32I | GATATC | 1 cut(s) | 118 |
| Eco47I | GGWCC | 1 cut(s) | 96 |
| EcoRV | GATATC | 1 cut(s) | 118 |
| EcoT14I | CCWWGG | 1 cut(s) | 248 |
| ErhI | CCWWGG | 1 cut(s) | 248 |
| FaeI | CATG | 4 cut(s) | 124, 189, 252, 344 |
| FaiI | YATR | 8 cut(s) | 122, 138, 178, 187, 250, 297, 342, 351 |
| FaqI | GGGAC | 1 cut(s) | 92 |
| FatI | CATG | 4 cut(s) | 120, 185, 248, 340 |
| Fnu4HI | GCNGC | 3 cut(s) | 85, 88, 286 |
| FokI | GGATG | 1 cut(s) | 31 |
| Fsp4HI | GCNGC | 3 cut(s) | 85, 88, 286 |
| FspAI | RTGCGCAY | 1 cut(s) | 339 |
| FspI | TGCGCA | 1 cut(s) | 339 |
| GlaI | GCGC | 1 cut(s) | 339 |
| GluI | GCNGC | 3 cut(s) | 85, 88, 286 |
| HhaI | GCGC | 1 cut(s) | 340 |
| Hin1II | CATG | 4 cut(s) | 124, 189, 252, 344 |
| Hin6I | GCGC | 1 cut(s) | 338 |
| HinP1I | GCGC | 1 cut(s) | 338 |
| HinfI | GANTC | 2 cut(s) | 13, 194 |
| HphI | GGTGA | 1 cut(s) | 85 |
| Hpy188I | TCNGA | 1 cut(s) | 18 |
| Hpy188III | TCNNGA | 2 cut(s) | 266, 272 |
| HpyCH4III | ACNGT | 1 cut(s) | 225 |
| HpyCH4V | TGCA | 1 cut(s) | 124 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 177 |
| HpyF3I | CTNAG | 2 cut(s) | 45, 172 |
| Hsp92II | CATG | 4 cut(s) | 124, 189, 252, 344 |
| HspAI | GCGC | 1 cut(s) | 338 |
| Kzo9I | GATC | 1 cut(s) | 268 |
| LmnI | GCTCC | 1 cut(s) | 241 |
| LpnPI | CCDG | 3 cut(s) | 123, 229, 246 |
| Lsp1109I | GCAGC | 3 cut(s) | 96, 99, 272 |
| LweI | GCATC | 1 cut(s) | 325 |
| MalI | GATC | 1 cut(s) | 270 |
| MboI | GATC | 1 cut(s) | 268 |
| MboII | GAAGA | 1 cut(s) | 76 |
| MluCI | AATT | 3 cut(s) | 54, 210, 314 |
| MlyI | GAGTC | 1 cut(s) | 188 |
| MnlI | CCTC | 2 cut(s) | 3, 249 |
| MseI | TTAA | 2 cut(s) | 281, 317 |
| MvnI | CGCG | 1 cut(s) | 273 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 177 |
| NcoI | CCATGG | 1 cut(s) | 248 |
| NdeII | GATC | 1 cut(s) | 268 |
| NlaIII | CATG | 4 cut(s) | 124, 189, 252, 344 |
| NmeAIII | GCCGAG | 1 cut(s) | 351 |
| NruI | TCGCGA | 1 cut(s) | 273 |
| NsbI | TGCGCA | 1 cut(s) | 339 |
| NspV | TTCGAA | 1 cut(s) | 32 |
| PfeI | GAWTC | 1 cut(s) | 13 |
| PkrI | GCNGC | 3 cut(s) | 86, 89, 287 |
| PleI | GAGTC | 1 cut(s) | 188 |
| PpsI | GAGTC | 1 cut(s) | 188 |
| PspPI | GGNCC | 1 cut(s) | 96 |
| RruI | TCGCGA | 1 cut(s) | 273 |
| SaqAI | TTAA | 2 cut(s) | 281, 317 |
| SatI | GCNGC | 3 cut(s) | 85, 88, 286 |
| Sau3AI | GATC | 1 cut(s) | 268 |
| Sau96I | GGNCC | 1 cut(s) | 96 |
| SchI | GAGTC | 1 cut(s) | 188 |
| SetI | ASST | 1 cut(s) | 287 |
| SfaNI | GCATC | 1 cut(s) | 325 |
| SfuI | TTCGAA | 1 cut(s) | 32 |
| SinI | GGWCC | 1 cut(s) | 96 |
| Sse9I | AATT | 3 cut(s) | 54, 210, 314 |
| SspI | AATATT | 1 cut(s) | 28 |
| StyI | CCWWGG | 1 cut(s) | 248 |
| TaaI | ACNGT | 1 cut(s) | 225 |
| TaqI | TCGA | 2 cut(s) | 32, 153 |
| TasI | AATT | 3 cut(s) | 54, 210, 314 |
| TfiI | GAWTC | 1 cut(s) | 13 |
| Tru1I | TTAA | 2 cut(s) | 281, 317 |
| Tru9I | TTAA | 2 cut(s) | 281, 317 |
| TseI | GCWGC | 3 cut(s) | 84, 87, 285 |
| TspDTI | ATGAA | 2 cut(s) | 174, 360 |
| TspGWI | ACGGA | 1 cut(s) | 136 |
| VpaK11BI | GGWCC | 1 cut(s) | 96 |