Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000142

Physical Location & Seq

Genomic Coordinates Forward (+)

49944717 .. 49946144

Gene Structure 1428 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019299

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

ATGTTCTTATTACTTACCCTAGATTTTATTGGCCGCAAGTGCAGCATGATCTCCATTAGAAGATGGACTGGAAAGTACAAACAAAAGCAAAAGCAGTTCAGAGAAGAGATCAGTATTAATGGAAGTAGTAGGTGGTCGAAGCAAATCCCAGAAGATATTCTGCAATTGATTCTACAACGTCTGTTGATACAGGATTTTCTACGGTGTGGTGGAGTTTGTCTTTCGTGGCGAGCTTCAGTTGATATGGCAATTGCCAGCAAGTGCTGCCCTCCTGCTCCTCAGCTTCCATGGCTTATGCTTCATTCGCATCCCTACTCACTCAAGGACAATTGTTTTCTAAGTCTGAGTGATGAAAAGATTTACACATCATCAAACCCCACCAATTCCATATGTACTGCACGCCATTGTGTTGGGTCAGTTGAAGGGTGGTTGATAATGGTAGAAAGCGACCTTTGGCGTCCCAAGTGTGTTATTATTGATGATGATCCGAGCAGCAATTTTTATACGACTGTCAACTTCTTTTTGAATCCAATATCAGGTGCCCAAGTGATGCTCCCATCTCAGTCTACCATTCCATGCCCTTACAGCTGTTTTATTTTCTTCTTGGAAAAAGTAGTAGCCTCTTCACCACCAACGAACTCGCTTCACTCATGTCTTGTGGCTTGCATTTGTTCAGGACATTACAATTTGGCTTTTTGTAGGCCAACTCAAAAATCATGGACCCTCATTCATCTGGGGGATGAGAATATCCATCTCTTTATTCGGGATATAGAAATAATTGATCAGAAAATATATGCTGCAACTTGGAAGGCAGGGCAGTTGGCTTTAATGGTGTTTGACATCGATCCAGATGCTCCTAGCTATAGGGTTGAAAGGTTGGTCATTCTTCATCCTAGGCCTTGCATGTTTCGAAATATTAGAAGAACAGACGGAGTCGAGTATTCTACTAAAAATGACGTCATTTATCTAGTAAAAGATTCTGCATCGAGGGAGTTATATATGATTTTTCGTAGTAACAGTTATGCTTATGAATATGATCCAATAATTCCTTGGGACATATTATGTGGTAATTACGTTATTCCGCCTCAAACTGAAGGATTCCAAGTGTTCAAGCTTGATCATGGTAATAGTGGCCACTCGTGGAAAGAAGTATTCGACTTTAGCGATCAGATATTGTTTGTAAGCGACGCCAGCAACAAATTTATCTCTGCAACTGACCTTGGTGCTCATAATCATAAGATAGTACAAGGAAACTGCATTTACTTTGCTTTTGATTATCCTTATTTTGGATCAGCTGGCGTTACAAAGCGCGACTTTGGGAAGTTTTCCATGACAAACAAGAACATCAAACCTTTAGCTCTTCCTCATGACTATTTTCTTACCAGATTAGTTGCTCAAACTGTATGGTTTACCCCACATCCTTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030684 GO:0030686 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904 GO:2000232

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT_2 Pescadillo_N

Protein Analysis

476

Amino Acids

54.45

Weight (kDa)

7.8

Isoelectric Point (pI)

45.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	112 - 435	1.6e-36	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000142)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13532 FvH4_2g28870 FvH4_3g30930 FvH4_3g37281 FvH4_3g37300 FvH4_3g37301 FvH4_3g37301 FvH4_4g23711 FvH4_5g02330 FvH4_6g16960 FvH4_6g16971 FvH4_6g21291 FvH4_6g21331 FvH4_6g22212 FvH4_6g22332 FvH4_6g36920 FvH4_6g37552 FvH4_6g37591 FvH4_6g39721 FvH4_6g46020 FvH4_6g47001 FvH4_6g47002 FvH4_6g47130 FvH4_6g47140 FvH4_6g47161 FvH4_6g47170 FvH4_6g47190 FvH4_6g49120 FvH4_6g49280 FvH4_6g49281 FvH4_6g49640 FvH4_6g49640
malus_domestica	MD03G1085600.v1.1 MD09G1027500.v1.1 MD09G1050100.v1.1
prunus_persica	Prupe.1G004300_v2.0.a1 Prupe.1G016300_v2.0.a1 Prupe.1G019300_v2.0.a1 Prupe.3G239100_v2.0.a1 Prupe.3G291200_v2.0.a1
pyrus_communis	pycom08g02840 pycom08g02860 pycom08g02870
rosa_chinensis	RchiOBHm_Chr2g0153831 RchiOBHm_Chr2g0166171 RchiOBHm_Chr2g0166201 RchiOBHm_Chr3g0476221 RchiOBHm_Chr4g0430971 RchiOBHm_Chr5g0067081 RchiOBHm_Chr7g0197821
rosa_laevigata	RLG00000001284 RLG00000006996 RLG00000012710 RLG00000019299 RLG00000020285 RLG00000020444 RLG00000020466 RLG00000020591 RLG00000020665 RLG00000020730 RLG00000020732 RLG00000021449 RLG00000021592 RLG00000021593 RLG00000021594 RLG00000021596 RLG00000021597 RLG00000021801 RLG00000023534 RLG00000023538 RLG00000023693 RLG00000023694 RLG00000023699 RLG00000024196 RLG00000024214 RLG00000024220 RLG00000024244 RLG00000024608 RLG00000024612 RLG00000035157 RLG00000035906
rosa_multiflora	Rmu_co8282815.1_g000001 Rmu_co8380495.1_g000001 Rmu_co8381111.1_g000001 Rmu_co8460513.1_g000001 Rmu_co8481947.1_g000001 Rmu_co8487937.1_g000001 Rmu_sc0000151.1_g000017 Rmu_sc0001427.1_g000003 Rmu_sc0001427.1_g000006 Rmu_sc0002611.1_g000008 Rmu_sc0003887.1_g000018 Rmu_sc0003887.1_g000019 Rmu_sc0003887.1_g000021 Rmu_sc0004119.1_g000004 Rmu_sc0004329.1_g000003 Rmu_sc0004485.1_g000024 Rmu_sc0005290.1_g000001 Rmu_sc0005609.1_g000006 Rmu_sc0006187.1_g000018 Rmu_sc0006218.1_g000032 Rmu_sc0006218.1_g000033 Rmu_sc0007150.1_g000003 Rmu_sc0007154.1_g000004 Rmu_sc0007154.1_g000005 Rmu_sc0007154.1_g000007 Rmu_sc0008314.1_g000012 Rmu_sc0010073.1_g000023 Rmu_sc0010073.1_g000025 Rmu_sc0011216.1_g000008 Rmu_sc0012445.1_g000005 Rmu_sc0013571.1_g000002 Rmu_sc0018648.1_g000002 Rmu_sc0020961.1_g000002 Rmu_sc0020961.1_g000003 Rmu_sc0023710.1_g000001 Rmu_sc0031310.1_g000008 Rmu_sc0033940.1_g000001 Rmu_sc0035493.1_g000001 Rmu_sc0039285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00014000 Rroxscaffold_1G00014020 Rroxscaffold_2G00082760 Rroxscaffold_2G00085090 Rroxscaffold_2G00085100 Rroxscaffold_2G00085140 Rroxscaffold_2G00086670 Rroxscaffold_2G00086680 Rroxscaffold_2G00098190 Rroxscaffold_2G00099270 Rroxscaffold_3G00227460 Rroxscaffold_3G00258190 Rroxscaffold_3G00259780 Rroxscaffold_6G00402940 Rroxscaffold_6G00410200 Rroxscaffold_6G00410210 Rroxscaffold_7G00184320
rosa_rugosa	Rorug02G0416100 Rorug02G0416200 Rorug02G0520900 Rorug02G0521200 Rorug02G0521300 Rorug02G0534600 Rorug03G0116300 Rorug03G0162900 Rorug03G0162900 Rorug04G0241400 Rorug05G0380900 Rorug07G0043800
rosa_samantha	Rh1AG115300 Rh2BG483700 Rh2BG509900 Rh2BG515700 Rh2BG515800 Rh2BG586500 Rh2BG586600 Rh2BG586700 Rh2BG598800 Rh2BG598900 Rh2BG599100 Rh2BG618400 Rh2BG630500 Rh2CG457400 Rh2CG484900 Rh3AG165300 Rh3AG212900 Rh3AG213300 Rh3BG145800 Rh3BG146100 Rh3BG235300 Rh3BG246500 Rh3BG247000 Rh3BG247100 Rh3CG240300 Rh3CG240800 Rh3CG240900 Rh3CG259600 Rh3DG147000 Rh3DG184800 Rh3DG184900 Rh3DG185000 Rh3DG239500 Rh3DG240100 Rh3DG240200 Rh3DG255800 Rh5BG458500 Rh5CG480400 Rh7BG170400 Rh7BG407900 Rh7CG176900
rosa_wichuraiana	Rw2G038990 Rw2G041550 Rw2G047660 Rw2G048940 Rw4G026370 Rw6G008730 Rw7G014600

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	960
AccB1I	GGYRCC	1 cut(s)	539
AccI	GTMKAC	1 cut(s)	566
AccII	CGCG	1 cut(s)	1311
AciI	CCGC	2 cut(s)	34, 1082
AclWI	GGATC	4 cut(s)	479, 839, 1031, 1297
AcoI	YGGCCR	2 cut(s)	31, 1132
AcsI	RAATTY	1 cut(s)	1199
AcuI	CTGAAG	2 cut(s)	219, 1113
AcyI	GRCGYC	3 cut(s)	457, 957, 1188
AfaI	GTAC	3 cut(s)	77, 394, 1245
AfiI	CCNNNNNNNGG	2 cut(s)	536, 1286
AgsI	TTSAA	4 cut(s)	422, 526, 872, 1111
AluBI	AGCT	7 cut(s)	233, 283, 588, 861, 1114, 1295, 1358
AluI	AGCT	7 cut(s)	233, 283, 588, 861, 1114, 1295, 1358
Alw21I	GWGCWC	1 cut(s)	1228
AlwI	GGATC	4 cut(s)	479, 839, 1031, 1297
AoxI	GGCC	4 cut(s)	31, 701, 896, 1132
ApeKI	GCWGC	4 cut(s)	42, 264, 492, 797
ApoI	RAATTY	1 cut(s)	1199
AseI	ATTAAT	1 cut(s)	117
Asp700I	GAANNNNTTC	1 cut(s)	156
AspA2I	CCTAGG	1 cut(s)	893
AspLEI	GCGC	1 cut(s)	1311
AspS9I	GGNCC	1 cut(s)	720
AsuHPI	GGTGA	1 cut(s)	618
AsuII	TTCGAA	1 cut(s)	910
AvaII	GGWCC	1 cut(s)	720
AvrII	CCTAGG	1 cut(s)	893
BaeGI	GKGCMC	1 cut(s)	544
BalI	TGGCCA	1 cut(s)	1134
BanI	GGYRCC	1 cut(s)	539
BauI	CACGAG	1 cut(s)	1138
Bbv12I	GWGCWC	1 cut(s)	1228
BbvCI	CCTCAGC	1 cut(s)	279
BbvI	GCAGC	4 cut(s)	54, 251, 504, 784
BccI	CCATC	3 cut(s)	57, 565, 759
BcgI	CGANNNNNNTGC	2 cut(s)	833, 867
BclI	TGATCA	2 cut(s)	781, 1117
BfaI	CTAG	4 cut(s)	20, 858, 894, 968
BfmI	CTRYAG	1 cut(s)	862
BisI	GCNGC	5 cut(s)	34, 43, 265, 493, 798
BlnI	CCTAGG	1 cut(s)	893
BlsI	GCNGC	5 cut(s)	35, 44, 266, 494, 799
Bme18I	GGWCC	1 cut(s)	720
BmgT120I	GGNCC	1 cut(s)	720
BmiI	GGNNCC	2 cut(s)	541, 722
BmsI	GCATC	4 cut(s)	316, 540, 841, 992
Bpu10I	CCTNAGC	1 cut(s)	279
Bpu14I	TTCGAA	1 cut(s)	910
BpuEI	CTTGAG	1 cut(s)	305
Bsa29I	ATCGAT	1 cut(s)	843
BsaBI	GATNNNNATC	1 cut(s)	483
BsaHI	GRCGYC	3 cut(s)	457, 957, 1188
BsaJI	CCNNGG	5 cut(s)	287, 893, 1049, 1219, 1421
Bsc4I	CCNNNNNNNGG	2 cut(s)	536, 1286
Bse1I	ACTGG	1 cut(s)	73
Bse8I	GATNNNNATC	1 cut(s)	483
BseCI	ATCGAT	1 cut(s)	843
BseDI	CCNNGG	5 cut(s)	287, 893, 1049, 1219, 1421
BseGI	GGATG	4 cut(s)	307, 745, 889, 1417
BseJI	GATNNNNATC	1 cut(s)	483
BseLI	CCNNNNNNNGG	2 cut(s)	536, 1286
BseMII	CTCAG	3 cut(s)	293, 335, 575
BseNI	ACTGG	1 cut(s)	73
BseRI	GAGGAG	1 cut(s)	267
BseSI	GKGCMC	1 cut(s)	544
BseXI	GCAGC	4 cut(s)	54, 251, 504, 784
BsgI	GTGCAG	2 cut(s)	61, 381
Bsh1236I	CGCG	1 cut(s)	1311
BshFI	GGCC	4 cut(s)	33, 703, 898, 1134
BshNI	GGYRCC	1 cut(s)	539
BshVI	ATCGAT	1 cut(s)	843
BsiHKAI	GWGCWC	1 cut(s)	1228
BslFI	GGGAC	2 cut(s)	444, 1067
BslI	CCNNNNNNNGG	2 cut(s)	536, 1286
BsmFI	GGGAC	2 cut(s)	444, 1067
BsnI	GGCC	4 cut(s)	33, 703, 898, 1134
Bsp119I	TTCGAA	1 cut(s)	910
Bsp1286I	GDGCHC	2 cut(s)	544, 1228
Bsp143I	GATC	9 cut(s)	48, 108, 484, 781, 844, 1036, 1117, 1165, 1289
Bsp19I	CCATGG	1 cut(s)	287
BspACI	CCGC	2 cut(s)	34, 1082
BspANI	GGCC	4 cut(s)	33, 703, 898, 1134
BspCNI	CTCAG	3 cut(s)	292, 336, 574
BspDI	ATCGAT	1 cut(s)	843
BspFNI	CGCG	1 cut(s)	1311
BspHI	TCATGA	1 cut(s)	1366
BspLI	GGNNCC	2 cut(s)	541, 722
BspPI	GGATC	4 cut(s)	479, 839, 1031, 1297
BspQI	GCTCTTC	1 cut(s)	1365
BspT104I	TTCGAA	1 cut(s)	910
BspT107I	GGYRCC	1 cut(s)	539
BsrI	ACTGG	1 cut(s)	73
BssECI	CCNNGG	5 cut(s)	287, 893, 1049, 1219, 1421
BssMI	GATC	9 cut(s)	48, 108, 484, 781, 844, 1036, 1117, 1165, 1289
BssNI	GRCGYC	3 cut(s)	457, 957, 1188
BssSI	CACGAG	1 cut(s)	1138
BssT1I	CCWWGG	5 cut(s)	287, 893, 1049, 1219, 1421
Bst2BI	CACGAG	1 cut(s)	1138
Bst4CI	ACNGT	4 cut(s)	204, 511, 1019, 1402
Bst6I	CTCTTC	3 cut(s)	99, 628, 1365
BstACI	GRCGYC	3 cut(s)	457, 957, 1188
BstAPI	GCANNNNNTGC	1 cut(s)	264
BstBI	TTCGAA	1 cut(s)	910
BstC8I	GCNNGC	6 cut(s)	231, 256, 400, 664, 1192, 1297
BstDEI	CTNAG	4 cut(s)	279, 338, 344, 561
BstDSI	CCRYGG	1 cut(s)	287
BstF5I	GGATG	4 cut(s)	307, 745, 889, 1417
BstFNI	CGCG	1 cut(s)	1311
BstHHI	GCGC	1 cut(s)	1311
BstKTI	GATC	9 cut(s)	51, 111, 487, 784, 847, 1039, 1120, 1168, 1292
BstMBI	GATC	9 cut(s)	48, 108, 484, 781, 844, 1036, 1117, 1165, 1289
BstMWI	GCNNNNNNNGC	7 cut(s)	39, 42, 264, 289, 304, 585, 1191
BstNSI	RCATGY	1 cut(s)	907
BstSFI	CTRYAG	1 cut(s)	862
BstSLI	GKGCMC	1 cut(s)	544
BstUI	CGCG	1 cut(s)	1311
BstV1I	GCAGC	4 cut(s)	54, 251, 504, 784
BstXI	CCANNNNNNTGG	2 cut(s)	410, 1422
Bsu15I	ATCGAT	1 cut(s)	843
BsuRI	GGCC	4 cut(s)	33, 703, 898, 1134
BsuTUI	ATCGAT	1 cut(s)	843
BtgI	CCRYGG	1 cut(s)	287
BtsCI	GGATG	4 cut(s)	307, 745, 889, 1417
Cac8I	GCNNGC	6 cut(s)	231, 256, 400, 664, 1192, 1297
CciI	TCATGA	1 cut(s)	1366
CfoI	GCGC	1 cut(s)	1311
Cfr13I	GGNCC	1 cut(s)	720
ClaI	ATCGAT	1 cut(s)	843
CseI	GACGC	2 cut(s)	446, 1196
Csp6I	GTAC	3 cut(s)	76, 393, 1244
CviAII	CATG	9 cut(s)	46, 288, 576, 651, 717, 904, 1121, 1330, 1367
CviQI	GTAC	3 cut(s)	76, 393, 1244
DdeI	CTNAG	4 cut(s)	279, 338, 344, 561
DpnI	GATC	9 cut(s)	50, 110, 486, 783, 846, 1038, 1119, 1167, 1291
DpnII	GATC	9 cut(s)	48, 108, 484, 781, 844, 1036, 1117, 1165, 1289
EaeI	YGGCCR	2 cut(s)	31, 1132
Eam1104I	CTCTTC	3 cut(s)	99, 628, 1365
EarI	CTCTTC	3 cut(s)	99, 628, 1365
EciI	GGCGGA	1 cut(s)	1071
Eco130I	CCWWGG	5 cut(s)	287, 893, 1049, 1219, 1421
Eco147I	AGGCCT	1 cut(s)	898
Eco47I	GGWCC	1 cut(s)	720
Eco57I	CTGAAG	2 cut(s)	219, 1113
EcoT14I	CCWWGG	5 cut(s)	287, 893, 1049, 1219, 1421
ErhI	CCWWGG	5 cut(s)	287, 893, 1049, 1219, 1421
FaeI	CATG	9 cut(s)	49, 291, 579, 654, 720, 907, 1124, 1333, 1370
FalI	AAGNNNNNCTT	2 cut(s)	1298, 1330
FaqI	GGGAC	2 cut(s)	444, 1067
FatI	CATG	9 cut(s)	45, 287, 575, 650, 716, 903, 1120, 1329, 1366
FauNDI	CATATG	1 cut(s)	389
FbaI	TGATCA	2 cut(s)	781, 1117
FblI	GTMKAC	1 cut(s)	566
Fnu4HI	GCNGC	5 cut(s)	34, 43, 265, 493, 798
FokI	GGATG	4 cut(s)	294, 752, 876, 1404
Fsp4HI	GCNGC	5 cut(s)	34, 43, 265, 493, 798
FspBI	CTAG	4 cut(s)	20, 858, 894, 968
GlaI	GCGC	1 cut(s)	1310
GluI	GCNGC	5 cut(s)	34, 43, 265, 493, 798
HaeIII	GGCC	4 cut(s)	33, 703, 898, 1134
HgaI	GACGC	2 cut(s)	446, 1196
HhaI	GCGC	1 cut(s)	1311
Hin1I	GRCGYC	3 cut(s)	457, 957, 1188
Hin1II	CATG	9 cut(s)	49, 291, 579, 654, 720, 907, 1124, 1333, 1370
Hin6I	GCGC	1 cut(s)	1309
HinP1I	GCGC	1 cut(s)	1309
HincII	GTYRAC	1 cut(s)	514
HindII	GTYRAC	1 cut(s)	514
HindIII	AAGCTT	1 cut(s)	1112
HinfI	GANTC	5 cut(s)	169, 526, 933, 977, 1098
HphI	GGTGA	1 cut(s)	618
Hpy166II	GTNNAC	3 cut(s)	514, 567, 1410
Hpy188I	TCNGA	5 cut(s)	101, 345, 489, 786, 1170
Hpy188III	TCNNGA	4 cut(s)	675, 764, 848, 1367
Hpy8I	GTNNAC	3 cut(s)	514, 567, 1410
Hpy99I	CGWCG	1 cut(s)	1190
HpyAV	CCTTC	3 cut(s)	416, 802, 1088
HpyCH4III	ACNGT	4 cut(s)	204, 511, 1019, 1402
HpyCH4IV	ACGT	3 cut(s)	178, 957, 1074
HpyCH4V	TGCA	9 cut(s)	42, 163, 398, 666, 800, 903, 983, 1211, 1257
HpyF10VI	GCNNNNNNNGC	7 cut(s)	39, 42, 264, 289, 304, 585, 1191
HpyF3I	CTNAG	4 cut(s)	279, 338, 344, 561
HpySE526I	ACGT	3 cut(s)	178, 957, 1074
Hsp92I	GRCGYC	3 cut(s)	457, 957, 1188
Hsp92II	CATG	9 cut(s)	49, 291, 579, 654, 720, 907, 1124, 1333, 1370
HspAI	GCGC	1 cut(s)	1309
Ksp22I	TGATCA	2 cut(s)	781, 1117
Kzo9I	GATC	9 cut(s)	48, 108, 484, 781, 844, 1036, 1117, 1165, 1289
LguI	GCTCTTC	1 cut(s)	1365
LmnI	GCTCC	3 cut(s)	280, 558, 859
Lsp1109I	GCAGC	4 cut(s)	54, 251, 504, 784
LweI	GCATC	4 cut(s)	316, 540, 841, 992
MaeI	CTAG	4 cut(s)	20, 858, 894, 968
MaeII	ACGT	3 cut(s)	178, 957, 1074
MaeIII	GTNAC	2 cut(s)	1013, 1300
MalI	GATC	9 cut(s)	50, 110, 486, 783, 846, 1038, 1119, 1167, 1291
MboI	GATC	9 cut(s)	48, 108, 484, 781, 844, 1036, 1117, 1165, 1289
MboII	GAAGA	8 cut(s)	72, 116, 164, 592, 615, 878, 933, 1352
MfeI	CAATTG	3 cut(s)	164, 249, 328
MhlI	GDGCHC	2 cut(s)	544, 1228
MlsI	TGGCCA	1 cut(s)	1134
MluNI	TGGCCA	1 cut(s)	1134
MlyI	GAGTC	1 cut(s)	942
MnlI	CCTC	7 cut(s)	279, 288, 631, 734, 981, 1095, 1374
Mox20I	TGGCCA	1 cut(s)	1134
MroXI	GAANNNNTTC	1 cut(s)	156
MscI	TGGCCA	1 cut(s)	1134
MseI	TTAA	2 cut(s)	117, 827
Msp20I	TGGCCA	1 cut(s)	1134
MspA1I	CMGCKG	2 cut(s)	588, 1295
MunI	CAATTG	3 cut(s)	164, 249, 328
MvnI	CGCG	1 cut(s)	1311
MwoI	GCNNNNNNNGC	7 cut(s)	39, 42, 264, 289, 304, 585, 1191
NcoI	CCATGG	1 cut(s)	287
NdeI	CATATG	1 cut(s)	389
NdeII	GATC	9 cut(s)	48, 108, 484, 781, 844, 1036, 1117, 1165, 1289
NlaIII	CATG	9 cut(s)	49, 291, 579, 654, 720, 907, 1124, 1333, 1370
NlaIV	GGNNCC	2 cut(s)	541, 722
NspI	RCATGY	1 cut(s)	907
NspV	TTCGAA	1 cut(s)	910
PagI	TCATGA	1 cut(s)	1366
PceI	AGGCCT	1 cut(s)	898
PciSI	GCTCTTC	1 cut(s)	1365
PcsI	WCGNNNNNNNCGW	1 cut(s)	1161
PdmI	GAANNNNTTC	1 cut(s)	156
PfeI	GAWTC	4 cut(s)	169, 526, 977, 1098
PflFI	GACNNNGTC	1 cut(s)	932
PkrI	GCNGC	5 cut(s)	35, 44, 266, 494, 799
PleI	GAGTC	1 cut(s)	941
PpsI	GAGTC	1 cut(s)	941
PshBI	ATTAAT	1 cut(s)	117
PspN4I	GGNNCC	2 cut(s)	541, 722
PspPI	GGNCC	1 cut(s)	720
PsyI	GACNNNGTC	1 cut(s)	932
PvuII	CAGCTG	2 cut(s)	588, 1295
RsaI	GTAC	3 cut(s)	77, 394, 1245
RsaNI	GTAC	3 cut(s)	76, 393, 1244
SapI	GCTCTTC	1 cut(s)	1365
SaqAI	TTAA	2 cut(s)	117, 827
SatI	GCNGC	5 cut(s)	34, 43, 265, 493, 798
Sau3AI	GATC	9 cut(s)	48, 108, 484, 781, 844, 1036, 1117, 1165, 1289
Sau96I	GGNCC	1 cut(s)	720
SchI	GAGTC	1 cut(s)	942
SduI	GDGCHC	2 cut(s)	544, 1228
SfaNI	GCATC	4 cut(s)	316, 540, 841, 992
SfcI	CTRYAG	1 cut(s)	862
SfuI	TTCGAA	1 cut(s)	910
SinI	GGWCC	1 cut(s)	720
SmlI	CTYRAG	1 cut(s)	320
SmoI	CTYRAG	1 cut(s)	320
SseBI	AGGCCT	1 cut(s)	898
SsiI	CCGC	2 cut(s)	34, 1082
SspI	AATATT	1 cut(s)	916
SspMI	CTAG	4 cut(s)	20, 858, 894, 968
StuI	AGGCCT	1 cut(s)	898
StyI	CCWWGG	5 cut(s)	287, 893, 1049, 1219, 1421
TaaI	ACNGT	4 cut(s)	204, 511, 1019, 1402
TaiI	ACGT	3 cut(s)	181, 960, 1077
TaqI	TCGA	6 cut(s)	137, 843, 910, 936, 986, 1155
TatI	WGTACW	3 cut(s)	75, 392, 1243
TauI	GCSGC	1 cut(s)	36
TfiI	GAWTC	4 cut(s)	169, 526, 977, 1098
Tru1I	TTAA	2 cut(s)	117, 827
Tru9I	TTAA	2 cut(s)	117, 827
TseI	GCWGC	4 cut(s)	42, 264, 492, 797
TspDTI	ATGAA	5 cut(s)	290, 366, 719, 878, 1044
TspGWI	ACGGA	1 cut(s)	945
Tth111I	GACNNNGTC	1 cut(s)	932
VpaK11BI	GGWCC	1 cut(s)	720
VspI	ATTAAT	1 cut(s)	117
XapI	RAATTY	1 cut(s)	1199
XceI	RCATGY	1 cut(s)	907
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1047
XmaJI	CCTAGG	1 cut(s)	893
XmiI	GTMKAC	1 cut(s)	566
XmnI	GAANNNNTTC	1 cut(s)	156
XspI	CTAG	4 cut(s)	20, 858, 894, 968
ZraI	GACGTC	1 cut(s)	958

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.