Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000517

Physical Location & Seq

Genomic Coordinates Reverse (-)

10405398 .. 10408243

Gene Structure 2846 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g16460.t8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGGCAAAATCCTTCGATTCCGAAACCGGAACCTACACGTCCCCCCGGCCTCCGGTCCACTTCCCCGAAAACCCCAACCTCTCTCTCACCTCCTTCCTCTTCCAATCGTCCTCCTCAACCCCTCACAGCCTCGCCCTCGCCGACGCCGACTCCGGAGAAACCCTAACCTTCCTACAGCTCAAAACCCTCGTCTCCAGGCTCGCACGAGCTCTCATCCAATTACACATCAACAAAGACGACGTCGTCCTTATCCTCTCCCCCAATTCCATCCACTTCCCCGCCTGCTTCCTCTCCGTCGTCGCCATTGGAGCCATTGCAACCAGCTGTAATCCTGTCTACACTGTCTATGAACTCTCAGACCAGATTAAAGACTGTAACCCTAAGCTCGTCATCACCGTCCCGGAACTCTGGCACAAAATCGAGAGCTTCAATATTCCAACAAAGTACTTCTCCGATTTGATCAGAACGTCAGACTCTATTGCCGATTTACCGGCGGTTAGTGTCAGACAGAGTGACGTGGCAGCGCTGCTGTACTCATCCGGCACGACCGGGAAGAGCAAGGGAGTAATTCTAACGCACCGGAACTTCATTACGGCGTCGTTGATGATAACGTCTGACCAGGACCGTTTCGGGGAGCCAAAACACGTGTTTTTGTGTTTTGTTCCCATGTTCCACATAATGGGGATGTCGGTGATTCTTTACTCGCAACTCAGGCGAGGCAACGCCGTCGTTTCGATGCCTAAGTTTGATATTGACAAGGCGTTGAAGGCGGTGGAGGAGTACAGGGTCACTCAGTTGTTCGTCGTTCCGCCGGTGATGATTGCCCTGGCGAAGCAGAGTGTGGTTAACAAGTACGACTTGTCGACGGTGAAGTTAATCGTGTCTGGTGCGGCGCCGCTTGGGAAAGAATTGATGGAAGATACGGCAAAGAATATTCCTCAGGCTGCCATTGTTCAGGGATATGGGATGACGGAAGCTTGTGGAATAGTTTCACTTGAGAATCCAAGAGAAGGATCTCCATTTTCCGGTTCAACCGGCATTCTTGCTCCCGGAATCGAATCTCGGATAATTAGTCTCGACACCAGTACCCTCAAGGCTCTTCCACCTAATGAATTAGGAGAAATATGGGTTAGAGGACCAAATATGATGCAAGGTTATTATAATAATCCAGAAGCAACGAAGTTGACCATAGATAAACAAGGTTGGGTACACACTGGAGATCTTGGATACTTTGATGAAGAGGGAAGATTGTATGTTGTGGATCGACTCAAAGAGCTCATCAAGTCTTATGGTTATCAGGTTGCCCCAGCAGAGCTTGAAGGGCTTTTACTTTCTCACCCTGAAATATTGGATGCAGTTGTAATCCCATTTCCAGATGCTAAAGCCGGTGAGGTTCCGATTGCTTATGTTGTTCGTGTACCGAATAGCTTGCTAACTGAACAAGACATTCTAAAATTTGTGGAGAAGCTGGTTGCACCATTCAAAAGATTGCGCAGCATAACTTTTGTGACCAGTGTCCCAAAGTCTGCTTCCGGAAAGATTTTGAGACGGGAGCTTATACAGAAAGTTCGATCAAACATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004321 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0008150 GO:0008152 GO:0009058 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016053 GO:0016408 GO:0016740 GO:0016746 GO:0016747 GO:0019752 GO:0032787 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00130 ko00360 ko00940 ko01100 ko01110 map00130 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

528

Amino Acids

57.89

Weight (kDa)

6.58

Isoelectric Point (pI)

46.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	36 - 387	4.4e-83	AMP-binding enzyme
AMP-binding_C	PF13193	438 - 489	1.4e-07	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000517)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G05160
fragaria_vesca	FvH4_3g30980 FvH4_3g30980 FvH4_3g30980 FvH4_3g30980 FvH4_3g30980 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460
malus_domestica	MD00G1033000.v1.1 MD00G1033100.v1.1 MD11G1145900.v1.1
prunus_persica	Prupe.1G562500_v2.0.a1 Prupe.6G109000_v2.0.a1 Prupe.6G220600_v2.0.a1 Prupe.7G129300_v2.0.a1
pyrus_communis	pycom10g19750 pycom11g11900
rosa_chinensis	RchiOBHm_Chr4g0437371 RchiOBHm_Chr5g0057221 RchiOBHm_Chr5g0057231 RchiOBHm_Chr5g0057411 RchiOBHm_Chr5g0057421 RchiOBHm_Chr5g0057431 RchiOBHm_Chr5g0057541 RchiOBHm_Chr5g0057621 RchiOBHm_Chr5g0057631 RchiOBHm_Chr7g0218731
rosa_laevigata	RLG00000024275 RLG00000035153 RLG00000035162 RLG00000035163
rosa_multiflora	Rmu_co8225990.1_g000001 Rmu_co8293931.1_g000001 Rmu_co8305349.1_g000001 Rmu_sc0001058.1_g000006 Rmu_sc0001334.1_g000005 Rmu_sc0002486.1_g000002 Rmu_sc0002486.1_g000004 Rmu_sc0002486.1_g000006 Rmu_sc0003730.1_g000007 Rmu_sc0009763.1_g000003 Rmu_sc0012503.1_g000004 Rmu_sc0041005.1_g000001
rosa_roxburghii	Rroxscaffold_1G00022890 Rroxscaffold_1G00022900 Rroxscaffold_1G00023020 Rroxscaffold_1G00039850 Rroxscaffold_2G00089660 Rroxscaffold_6G00410920 Rroxscaffold_7G00210330
rosa_rugosa	Rorug01G0121100 Rorug05G0306100 Rorug05G0306200 Rorug05G0306700 Rorug05G0308100
rosa_samantha	Rh1AG142700 Rh1BG111300 Rh1DG148300 Rh2DG519700 Rh3DG192200 Rh5BG387400 Rh5BG387600 Rh5CG409800 Rh5CG409900 Rh5CG410000 Rh5CG411000 Rh5CG411600 Rh5CG411700 Rh5DG400500 Rh5DG400600 Rh5DG400700 Rh5DG401700 Rh5DG401800 Rh7CG338500
rosa_wichuraiana	Rw5G035330 Rw5G035540 Rw5G035550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1161
AasI	GACNNNNNNGTC	1 cut(s)	242
AatII	GACGTC	1 cut(s)	243
Acc16I	TGCGCA	1 cut(s)	1493
AccB1I	GGYRCC	1 cut(s)	892
AccB7I	CCANNNNNTGG	1 cut(s)	679
AccI	GTMKAC	2 cut(s)	336, 863
AccIII	TCCGGA	2 cut(s)	152, 1532
AciI	CCGC	6 cut(s)	279, 494, 770, 809, 890, 896
AclWI	GGATC	2 cut(s)	1021, 1269
AcsI	RAATTY	1 cut(s)	1454
AcvI	CACGTG	1 cut(s)	646
AcyI	GRCGYC	4 cut(s)	144, 240, 596, 893
AfaI	GTAC	7 cut(s)	446, 533, 782, 854, 1087, 1209, 1419
AfeI	AGCGCT	1 cut(s)	525
AfiI	CCNNNNNNNGG	5 cut(s)	52, 631, 679, 1010, 1025
AflIII	ACRYGT	4 cut(s)	36, 643, 645, 1578
AgsI	TTSAA	5 cut(s)	430, 766, 1032, 1319, 1483
AjiI	CACGTC	2 cut(s)	39, 517
AjnI	CCWGG	3 cut(s)	194, 618, 825
AjuI	GAANNNNNNNTTGG	2 cut(s)	1513, 1545
Alw21I	GWGCWC	2 cut(s)	211, 1278
Alw26I	GTCTC	3 cut(s)	196, 1079, 1540
AlwI	GGATC	2 cut(s)	1021, 1269
Aor13HI	TCCGGA	2 cut(s)	152, 1532
Aor51HI	AGCGCT	1 cut(s)	525
AoxI	GGCC	1 cut(s)	47
ApeKI	GCWGC	4 cut(s)	521, 526, 944, 1494
ApoI	RAATTY	1 cut(s)	1454
ArsI	GACNNNNNNTTYG	4 cut(s)	174, 206, 225, 257
Asp700I	GAANNNNTTC	1 cut(s)	988
AspLEI	GCGC	3 cut(s)	526, 895, 1494
AspS9I	GGNCC	3 cut(s)	55, 622, 1136
AsuC2I	CCSGG	4 cut(s)	46, 401, 550, 1050
AsuHPI	GGTGA	7 cut(s)	79, 385, 703, 826, 880, 1328, 1400
AvaII	GGWCC	3 cut(s)	55, 622, 1136
AxyI	CCTNAGG	1 cut(s)	939
BaeI	ACNNNNGTAYC	2 cut(s)	1069, 1102
BanI	GGYRCC	1 cut(s)	892
BanII	GRGCYC	2 cut(s)	211, 1278
BarI	GAAGNNNNNNTAC	2 cut(s)	1311, 1343
BauI	CACGAG	1 cut(s)	204
BbrPI	CACGTG	1 cut(s)	646
Bbv12I	GWGCWC	2 cut(s)	211, 1278
BbvI	GCAGC	4 cut(s)	513, 533, 931, 1506
BccI	CCATC	2 cut(s)	275, 907
BceAI	ACGGC	3 cut(s)	609, 710, 939
BcgI	CGANNNNNNTGC	4 cut(s)	709, 743, 1411, 1445
BciT130I	CCWGG	3 cut(s)	196, 620, 827
BciVI	GTATCC	1 cut(s)	1220
BclI	TGATCA	1 cut(s)	459
BcnI	CCSGG	4 cut(s)	46, 401, 550, 1050
BcoDI	GTCTC	3 cut(s)	196, 1079, 1540
BfmI	CTRYAG	1 cut(s)	173
BfoI	RGCGCY	2 cut(s)	527, 896
BfuI	GTATCC	1 cut(s)	1220
BglII	AGATCT	1 cut(s)	1219
BisI	GCNGC	6 cut(s)	522, 527, 891, 896, 945, 1495
BlsI	GCNGC	6 cut(s)	523, 528, 892, 897, 946, 1496
BmcAI	AGTACT	1 cut(s)	446
Bme1390I	CCNGG	7 cut(s)	46, 196, 401, 550, 620, 827, 1050
Bme18I	GGWCC	3 cut(s)	55, 622, 1136
BmgBI	CACGTC	2 cut(s)	39, 517
BmgT120I	GGNCC	3 cut(s)	55, 622, 1136
BmiI	GGNNCC	5 cut(s)	31, 310, 636, 894, 1395
BmrFI	CCNGG	7 cut(s)	46, 196, 401, 550, 620, 827, 1050
BmsI	GCATC	4 cut(s)	726, 1137, 1342, 1366
BoxI	GACNNNNGTC	1 cut(s)	1514
BpmI	CTGGAG	2 cut(s)	178, 1236
Bpu10I	CCTNAGC	1 cut(s)	381
BpuEI	CTTGAG	2 cut(s)	1016, 1076
BpuMI	CCSGG	4 cut(s)	46, 401, 550, 1050
BsaAI	YACGTR	1 cut(s)	646
BsaHI	GRCGYC	4 cut(s)	144, 240, 596, 893
BsaJI	CCNNGG	2 cut(s)	44, 825
BsaWI	WCCGGW	6 cut(s)	26, 52, 152, 579, 1025, 1532
BsaXI	ACNNNNNCTCC	2 cut(s)	134, 164
Bsc4I	CCNNNNNNNGG	5 cut(s)	52, 631, 679, 1010, 1025
Bse118I	RCCGGY	4 cut(s)	490, 811, 1034, 1385
Bse1I	ACTGG	3 cut(s)	1083, 1219, 1512
Bse21I	CCTNAGG	1 cut(s)	939
Bse3DI	GCAATG	1 cut(s)	312
BseAI	TCCGGA	2 cut(s)	152, 1532
BseBI	CCWGG	3 cut(s)	196, 620, 827
BseDI	CCNNGG	2 cut(s)	44, 825
BseGI	GGATG	6 cut(s)	213, 267, 536, 690, 972, 1357
BseLI	CCNNNNNNNGG	5 cut(s)	52, 631, 679, 1010, 1025
BseMI	GCAATG	1 cut(s)	312
BseMII	CTCAG	4 cut(s)	369, 724, 806, 953
BseNI	ACTGG	3 cut(s)	1083, 1219, 1512
BseRI	GAGGAG	2 cut(s)	103, 791
BseXI	GCAGC	4 cut(s)	513, 533, 931, 1506
BseYI	CCCAGC	1 cut(s)	1306
Bsh1285I	CGRYCG	1 cut(s)	549
BshFI	GGCC	1 cut(s)	49
BshNI	GGYRCC	1 cut(s)	892
BsiEI	CGRYCG	1 cut(s)	549
BsiHKAI	GWGCWC	2 cut(s)	211, 1278
BslFI	GGGAC	3 cut(s)	25, 383, 1502
BslI	CCNNNNNNNGG	5 cut(s)	52, 631, 679, 1010, 1025
BsmAI	GTCTC	3 cut(s)	196, 1079, 1540
BsmBI	CGTCTC	2 cut(s)	196, 1540
BsmFI	GGGAC	3 cut(s)	25, 383, 1502
BsmI	GAATGC	1 cut(s)	1038
BsnI	GGCC	1 cut(s)	49
Bsp1286I	GDGCHC	2 cut(s)	211, 1278
Bsp13I	TCCGGA	2 cut(s)	152, 1532
Bsp143I	GATC	5 cut(s)	459, 1013, 1219, 1261, 1571
BspACI	CCGC	6 cut(s)	279, 494, 770, 809, 890, 896
BspANI	GGCC	1 cut(s)	49
BspCNI	CTCAG	4 cut(s)	368, 723, 805, 952
BspEI	TCCGGA	2 cut(s)	152, 1532
BspLI	GGNNCC	5 cut(s)	31, 310, 636, 894, 1395
BspPI	GGATC	2 cut(s)	1021, 1269
BspQI	GCTCTTC	2 cut(s)	548, 1104
BspT107I	GGYRCC	1 cut(s)	892
BsrDI	GCAATG	1 cut(s)	312
BsrFI	RCCGGY	4 cut(s)	490, 811, 1034, 1385
BsrI	ACTGG	3 cut(s)	1083, 1219, 1512
BssAI	RCCGGY	4 cut(s)	490, 811, 1034, 1385
BssECI	CCNNGG	2 cut(s)	44, 825
BssMI	GATC	5 cut(s)	459, 1013, 1219, 1261, 1571
BssNI	GRCGYC	4 cut(s)	144, 240, 596, 893
BssSI	CACGAG	1 cut(s)	204
Bst2BI	CACGAG	1 cut(s)	204
Bst2UI	CCWGG	3 cut(s)	196, 620, 827
Bst4CI	ACNGT	5 cut(s)	343, 374, 397, 626, 868
Bst6I	CTCTTC	4 cut(s)	104, 548, 1104, 1233
BstACI	GRCGYC	4 cut(s)	144, 240, 596, 893
BstBAI	YACGTR	1 cut(s)	646
BstC8I	GCNNGC	3 cut(s)	201, 283, 1430
BstDEI	CTNAG	6 cut(s)	355, 381, 710, 741, 792, 939
BstF5I	GGATG	6 cut(s)	213, 267, 536, 690, 972, 1357
BstH2I	RGCGCY	2 cut(s)	527, 896
BstHHI	GCGC	3 cut(s)	526, 895, 1494
BstKTI	GATC	5 cut(s)	462, 1016, 1222, 1264, 1574
BstMAI	GTCTC	3 cut(s)	196, 1079, 1540
BstMBI	GATC	5 cut(s)	459, 1013, 1219, 1261, 1571
BstMCI	CGRYCG	1 cut(s)	549
BstMWI	GCNNNNNNNGC	4 cut(s)	308, 712, 767, 1321
BstNI	CCWGG	3 cut(s)	196, 620, 827
BstNSI	RCATGY	1 cut(s)	1582
BstPAI	GACNNNNGTC	1 cut(s)	1514
BstSCI	CCNGG	7 cut(s)	44, 194, 399, 548, 618, 825, 1048
BstSFI	CTRYAG	1 cut(s)	173
BstV1I	GCAGC	4 cut(s)	513, 533, 931, 1506
BstX2I	RGATCY	2 cut(s)	1013, 1219
BstYI	RGATCY	2 cut(s)	1013, 1219
Bsu36I	CCTNAGG	1 cut(s)	939
BsuI	GTATCC	1 cut(s)	1220
BsuRI	GGCC	1 cut(s)	49
BtrI	CACGTC	2 cut(s)	39, 517
BtsCI	GGATG	6 cut(s)	213, 267, 536, 690, 972, 1357
BtsIMutI	CAGTG	3 cut(s)	339, 1212, 1519
Cac8I	GCNNGC	3 cut(s)	201, 283, 1430
CfoI	GCGC	3 cut(s)	526, 895, 1494
Cfr10I	RCCGGY	4 cut(s)	490, 811, 1034, 1385
Cfr13I	GGNCC	3 cut(s)	55, 622, 1136
CseI	GACGC	2 cut(s)	152, 585
Csp6I	GTAC	7 cut(s)	445, 532, 781, 853, 1086, 1208, 1418
CviAII	CATG	2 cut(s)	667, 1579
CviQI	GTAC	7 cut(s)	445, 532, 781, 853, 1086, 1208, 1418
DdeI	CTNAG	6 cut(s)	355, 381, 710, 741, 792, 939
DinI	GGCGCC	1 cut(s)	894
DpnI	GATC	5 cut(s)	461, 1015, 1221, 1263, 1573
DpnII	GATC	5 cut(s)	459, 1013, 1219, 1261, 1571
DrdI	GACNNNNNNGTC	1 cut(s)	242
DseDI	GACNNNNNNGTC	1 cut(s)	242
Eam1104I	CTCTTC	4 cut(s)	104, 548, 1104, 1233
EarI	CTCTTC	4 cut(s)	104, 548, 1104, 1233
EciI	GGCGGA	1 cut(s)	798
Ecl136II	GAGCTC	2 cut(s)	209, 1276
Eco24I	GRGCYC	2 cut(s)	211, 1278
Eco47I	GGWCC	3 cut(s)	55, 622, 1136
Eco47III	AGCGCT	1 cut(s)	525
Eco53kI	GAGCTC	2 cut(s)	209, 1276
Eco72I	CACGTG	1 cut(s)	646
Eco81I	CCTNAGG	1 cut(s)	939
EcoICRI	GAGCTC	2 cut(s)	209, 1276
EcoRII	CCWGG	3 cut(s)	194, 618, 825
EcoT38I	GRGCYC	2 cut(s)	211, 1278
EgeI	GGCGCC	1 cut(s)	894
EheI	GGCGCC	1 cut(s)	894
Esp3I	CGTCTC	2 cut(s)	196, 1540
FaeI	CATG	2 cut(s)	670, 1582
FalI	AAGNNNNNCTT	2 cut(s)	842, 874
FaqI	GGGAC	3 cut(s)	25, 383, 1502
FatI	CATG	2 cut(s)	666, 1578
FauI	CCCGC	1 cut(s)	286
FbaI	TGATCA	1 cut(s)	459
FblI	GTMKAC	2 cut(s)	336, 863
Fnu4HI	GCNGC	6 cut(s)	522, 527, 891, 896, 945, 1495
FokI	GGATG	6 cut(s)	200, 254, 523, 697, 979, 1364
FriOI	GRGCYC	2 cut(s)	211, 1278
Fsp4HI	GCNGC	6 cut(s)	522, 527, 891, 896, 945, 1495
FspI	TGCGCA	1 cut(s)	1493
GlaI	GCGC	3 cut(s)	525, 894, 1493
GluI	GCNGC	6 cut(s)	522, 527, 891, 896, 945, 1495
GsaI	CCCAGC	1 cut(s)	1310
GsuI	CTGGAG	2 cut(s)	178, 1236
HaeII	RGCGCY	2 cut(s)	527, 896
HaeIII	GGCC	1 cut(s)	49
HgaI	GACGC	2 cut(s)	152, 585
HhaI	GCGC	3 cut(s)	526, 895, 1494
Hin1I	GRCGYC	4 cut(s)	144, 240, 596, 893
Hin1II	CATG	2 cut(s)	670, 1582
Hin6I	GCGC	3 cut(s)	524, 893, 1492
HinP1I	GCGC	3 cut(s)	524, 893, 1492
HincII	GTYRAC	3 cut(s)	847, 864, 1185
HindII	GTYRAC	3 cut(s)	847, 864, 1185
HindIII	AAGCTT	1 cut(s)	975
HinfI	GANTC	8 cut(s)	17, 149, 473, 694, 1000, 1053, 1058, 1266
HpaI	GTTAAC	1 cut(s)	847
HphI	GGTGA	7 cut(s)	79, 385, 703, 826, 880, 1328, 1400
Hpy166II	GTNNAC	7 cut(s)	58, 337, 847, 864, 1185, 1210, 1418
Hpy188I	TCNGA	9 cut(s)	22, 358, 454, 464, 472, 506, 616, 1065, 1398
Hpy188III	TCNNGA	6 cut(s)	153, 421, 1076, 1169, 1373, 1533
Hpy8I	GTNNAC	7 cut(s)	58, 337, 847, 864, 1185, 1210, 1418
Hpy99I	CGWCG	9 cut(s)	146, 242, 245, 299, 302, 601, 731, 806, 868
HpyAV	CCTTC	6 cut(s)	22, 103, 178, 760, 1004, 1313
HpyCH4III	ACNGT	5 cut(s)	343, 374, 397, 626, 868
HpyCH4IV	ACGT	6 cut(s)	38, 240, 467, 516, 611, 645
HpyCH4V	TGCA	4 cut(s)	317, 1150, 1355, 1475
HpyF10VI	GCNNNNNNNGC	4 cut(s)	308, 712, 767, 1321
HpyF3I	CTNAG	6 cut(s)	355, 381, 710, 741, 792, 939
HpySE526I	ACGT	6 cut(s)	38, 240, 467, 516, 611, 645
Hsp92I	GRCGYC	4 cut(s)	144, 240, 596, 893
Hsp92II	CATG	2 cut(s)	670, 1582
HspAI	GCGC	3 cut(s)	524, 893, 1492
KasI	GGCGCC	1 cut(s)	892
Kpn2I	TCCGGA	2 cut(s)	152, 1532
Ksp22I	TGATCA	1 cut(s)	459
KspAI	GTTAAC	1 cut(s)	847
Kzo9I	GATC	5 cut(s)	459, 1013, 1219, 1261, 1571
LguI	GCTCTTC	2 cut(s)	548, 1104
LmnI	GCTCC	4 cut(s)	308, 634, 1051, 1552
Lsp1109I	GCAGC	4 cut(s)	513, 533, 931, 1506
LweI	GCATC	4 cut(s)	726, 1137, 1342, 1366
MaeII	ACGT	6 cut(s)	38, 240, 467, 516, 611, 645
MaeIII	GTNAC	4 cut(s)	374, 512, 787, 1507
MalI	GATC	5 cut(s)	461, 1015, 1221, 1263, 1573
MboI	GATC	5 cut(s)	459, 1013, 1219, 1261, 1571
MboII	GAAGA	6 cut(s)	91, 565, 929, 1091, 1250, 1257
MflI	RGATCY	2 cut(s)	1013, 1219
MhlI	GDGCHC	2 cut(s)	211, 1278
MluCI	AATT	7 cut(s)	218, 262, 567, 908, 1068, 1112, 1454
Mly113I	GGCGCC	1 cut(s)	893
MlyI	GAGTC	3 cut(s)	143, 467, 1260
MmeI	TCCRAC	1 cut(s)	461
MroI	TCCGGA	2 cut(s)	152, 1532
MroXI	GAANNNNTTC	1 cut(s)	988
MseI	TTAA	3 cut(s)	366, 846, 875
MspA1I	CMGCKG	1 cut(s)	324
MspR9I	CCNGG	7 cut(s)	46, 196, 401, 550, 620, 827, 1050
Mva1269I	GAATGC	1 cut(s)	1038
MvaI	CCWGG	3 cut(s)	196, 620, 827
MwoI	GCNNNNNNNGC	4 cut(s)	308, 712, 767, 1321
NarI	GGCGCC	1 cut(s)	893
NciI	CCSGG	4 cut(s)	46, 401, 550, 1050
NdeII	GATC	5 cut(s)	459, 1013, 1219, 1261, 1571
NlaIII	CATG	2 cut(s)	670, 1582
NlaIV	GGNNCC	5 cut(s)	31, 310, 636, 894, 1395
NmuCI	GTSAC	3 cut(s)	512, 787, 1507
NsbI	TGCGCA	1 cut(s)	1493
NspI	RCATGY	1 cut(s)	1582
PciI	ACATGT	1 cut(s)	1578
PciSI	GCTCTTC	2 cut(s)	548, 1104
PcsI	WCGNNNNNNNCGW	3 cut(s)	138, 144, 393
PctI	GAATGC	1 cut(s)	1038
PdmI	GAANNNNTTC	1 cut(s)	988
PfeI	GAWTC	5 cut(s)	17, 694, 1000, 1053, 1058
PflFI	GACNNNGTC	2 cut(s)	239, 242
PflMI	CCANNNNNTGG	1 cut(s)	679
PfoI	TCCNGGA	2 cut(s)	399, 1048
PkrI	GCNGC	6 cut(s)	523, 528, 892, 897, 946, 1496
PleI	GAGTC	3 cut(s)	143, 467, 1260
PluTI	GGCGCC	1 cut(s)	896
PmaCI	CACGTG	1 cut(s)	646
PmlI	CACGTG	1 cut(s)	646
PpsI	GAGTC	3 cut(s)	143, 467, 1260
Ppu21I	YACGTR	1 cut(s)	646
PscI	ACATGT	1 cut(s)	1578
PshAI	GACNNNNGTC	1 cut(s)	1514
PsiI	TTATAA	1 cut(s)	1161
Psp124BI	GAGCTC	2 cut(s)	211, 1278
Psp6I	CCWGG	3 cut(s)	194, 618, 825
PspCI	CACGTG	1 cut(s)	646
PspFI	CCCAGC	1 cut(s)	1306
PspGI	CCWGG	3 cut(s)	194, 618, 825
PspN4I	GGNNCC	5 cut(s)	31, 310, 636, 894, 1395
PspPI	GGNCC	3 cut(s)	55, 622, 1136
PsuI	RGATCY	2 cut(s)	1013, 1219
PsyI	GACNNNGTC	2 cut(s)	239, 242
PvuII	CAGCTG	1 cut(s)	324
RsaI	GTAC	7 cut(s)	446, 533, 782, 854, 1087, 1209, 1419
RsaNI	GTAC	7 cut(s)	445, 532, 781, 853, 1086, 1208, 1418
SacI	GAGCTC	2 cut(s)	211, 1278
SalI	GTCGAC	1 cut(s)	862
SapI	GCTCTTC	2 cut(s)	548, 1104
SaqAI	TTAA	3 cut(s)	366, 846, 875
SatI	GCNGC	6 cut(s)	522, 527, 891, 896, 945, 1495
Sau3AI	GATC	5 cut(s)	459, 1013, 1219, 1261, 1571
Sau96I	GGNCC	3 cut(s)	55, 622, 1136
ScaI	AGTACT	1 cut(s)	446
SchI	GAGTC	3 cut(s)	143, 467, 1260
ScrFI	CCNGG	7 cut(s)	46, 196, 401, 550, 620, 827, 1050
SduI	GDGCHC	2 cut(s)	211, 1278
SfaNI	GCATC	4 cut(s)	726, 1137, 1342, 1366
SfcI	CTRYAG	1 cut(s)	173
SfoI	GGCGCC	1 cut(s)	894
SgrAI	CRCCGGYG	1 cut(s)	811
SinI	GGWCC	3 cut(s)	55, 622, 1136
SmlI	CTYRAG	2 cut(s)	995, 1091
SmoI	CTYRAG	2 cut(s)	995, 1091
Sse9I	AATT	7 cut(s)	218, 262, 567, 908, 1068, 1112, 1454
SsiI	CCGC	6 cut(s)	279, 494, 770, 809, 890, 896
SspDI	GGCGCC	1 cut(s)	892
SspI	AATATT	3 cut(s)	433, 934, 1347
SstI	GAGCTC	2 cut(s)	211, 1278
StyD4I	CCNGG	7 cut(s)	44, 194, 399, 548, 618, 825, 1048
TaaI	ACNGT	5 cut(s)	343, 374, 397, 626, 868
TaiI	ACGT	6 cut(s)	41, 243, 470, 519, 614, 648
TaqI	TCGA	8 cut(s)	15, 420, 734, 863, 1056, 1077, 1264, 1570
TasI	AATT	7 cut(s)	218, 262, 567, 908, 1068, 1112, 1454
TatI	WGTACW	3 cut(s)	444, 531, 780
TauI	GCSGC	2 cut(s)	893, 898
TfiI	GAWTC	5 cut(s)	17, 694, 1000, 1053, 1058
Tru1I	TTAA	3 cut(s)	366, 846, 875
Tru9I	TTAA	3 cut(s)	366, 846, 875
TscAI	CASTG	3 cut(s)	346, 1219, 1519
TseFI	GTSAC	3 cut(s)	512, 787, 1507
TseI	GCWGC	4 cut(s)	521, 526, 944, 1494
Tsp45I	GTSAC	3 cut(s)	512, 787, 1507
TspDTI	ATGAA	4 cut(s)	363, 577, 1125, 1251
TspGWI	ACGGA	2 cut(s)	283, 986
TspRI	CASTG	3 cut(s)	346, 1219, 1519
Tth111I	GACNNNGTC	2 cut(s)	239, 242
Van91I	CCANNNNNTGG	1 cut(s)	679
VpaK11BI	GGWCC	3 cut(s)	55, 622, 1136
XapI	RAATTY	1 cut(s)	1454
XceI	RCATGY	1 cut(s)	1582
XmiI	GTMKAC	2 cut(s)	336, 863
XmnI	GAANNNNTTC	1 cut(s)	988
ZraI	GACGTC	1 cut(s)	241
ZrmI	AGTACT	1 cut(s)	446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.