4-coumarate--CoA ligase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| AMP-binding | PF00501 | 132 - 329 | 4.7e-41 | AMP-binding enzyme |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 254 |
| Acc36I | ACCTGC | 1 cut(s) | 82 |
| AccB1I | GGYRCC | 1 cut(s) | 170 |
| AccII | CGCG | 1 cut(s) | 536 |
| AccIII | TCCGGA | 1 cut(s) | 881 |
| AciI | CCGC | 1 cut(s) | 1221 |
| AclWI | GGATC | 1 cut(s) | 185 |
| AcoI | YGGCCR | 2 cut(s) | 519, 1069 |
| AcsI | RAATTY | 2 cut(s) | 317, 415 |
| AcuI | CTGAAG | 1 cut(s) | 171 |
| AdeI | CACNNNGTG | 1 cut(s) | 478 |
| AfaI | GTAC | 3 cut(s) | 614, 686, 1035 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 630, 631 |
| AgsI | TTSAA | 8 cut(s) | 46, 124, 317, 567, 580, 703, 890, 988 |
| AhlI | ACTAGT | 1 cut(s) | 838 |
| Alw26I | GTCTC | 1 cut(s) | 376 |
| AlwI | GGATC | 1 cut(s) | 185 |
| Aor13HI | TCCGGA | 1 cut(s) | 881 |
| AoxI | GGCC | 6 cut(s) | 365, 519, 962, 999, 1069, 1218 |
| ApeKI | GCWGC | 4 cut(s) | 538, 541, 722, 937 |
| ApoI | RAATTY | 2 cut(s) | 317, 415 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 63, 95 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 820 |
| AspLEI | GCGC | 1 cut(s) | 538 |
| AspS9I | GGNCC | 5 cut(s) | 290, 365, 714, 845, 962 |
| AsuHPI | GGTGA | 3 cut(s) | 16, 613, 1170 |
| AvaII | GGWCC | 3 cut(s) | 290, 714, 845 |
| BalI | TGGCCA | 1 cut(s) | 1071 |
| BanI | GGYRCC | 1 cut(s) | 170 |
| BbvI | GCAGC | 4 cut(s) | 528, 550, 734, 924 |
| BccI | CCATC | 2 cut(s) | 168, 430 |
| BceAI | ACGGC | 2 cut(s) | 62, 506 |
| BciVI | GTATCC | 1 cut(s) | 1046 |
| BcoDI | GTCTC | 1 cut(s) | 376 |
| BcuI | ACTAGT | 1 cut(s) | 838 |
| BfaI | CTAG | 3 cut(s) | 384, 839, 899 |
| BfuAI | ACCTGC | 1 cut(s) | 82 |
| BfuI | GTATCC | 1 cut(s) | 1046 |
| BisI | GCNGC | 5 cut(s) | 539, 542, 723, 938, 1221 |
| BlsI | GCNGC | 5 cut(s) | 540, 543, 724, 939, 1222 |
| Bme18I | GGWCC | 3 cut(s) | 290, 714, 845 |
| BmgT120I | GGNCC | 5 cut(s) | 290, 365, 714, 845, 962 |
| BmiI | GGNNCC | 3 cut(s) | 172, 715, 963 |
| BmrI | ACTGGG | 1 cut(s) | 112 |
| BmsI | GCATC | 2 cut(s) | 76, 459 |
| BmuI | ACTGGG | 1 cut(s) | 112 |
| BpmI | CTGGAG | 2 cut(s) | 483, 605 |
| Bpu10I | CCTNAGC | 1 cut(s) | 786 |
| BpuEI | CTTGAG | 2 cut(s) | 310, 756 |
| BsaBI | GATNNNNATC | 1 cut(s) | 237 |
| BsaJI | CCNNGG | 2 cut(s) | 27, 148 |
| BsaWI | WCCGGW | 2 cut(s) | 716, 881 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 630, 631 |
| Bse1I | ACTGG | 3 cut(s) | 118, 252, 1045 |
| Bse3DI | GCAATG | 2 cut(s) | 174, 420 |
| Bse8I | GATNNNNATC | 1 cut(s) | 237 |
| BseAI | TCCGGA | 1 cut(s) | 881 |
| BseDI | CCNNGG | 2 cut(s) | 27, 148 |
| BseGI | GGATG | 1 cut(s) | 474 |
| BseJI | GATNNNNATC | 1 cut(s) | 237 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 630, 631 |
| BseMI | GCAATG | 2 cut(s) | 174, 420 |
| BseMII | CTCAG | 3 cut(s) | 800, 908, 1146 |
| BseNI | ACTGG | 3 cut(s) | 118, 252, 1045 |
| BseRI | GAGGAG | 3 cut(s) | 717, 764, 1174 |
| BseXI | GCAGC | 4 cut(s) | 528, 550, 734, 924 |
| BseYI | CCCAGC | 2 cut(s) | 940, 1005 |
| BsgI | GTGCAG | 1 cut(s) | 741 |
| Bsh1236I | CGCG | 1 cut(s) | 536 |
| BshFI | GGCC | 6 cut(s) | 367, 521, 964, 1001, 1071, 1220 |
| BshNI | GGYRCC | 1 cut(s) | 170 |
| BsiSI | CCGG | 2 cut(s) | 717, 882 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 630, 631 |
| BsmAI | GTCTC | 1 cut(s) | 376 |
| BsmI | GAATGC | 1 cut(s) | 838 |
| BsnI | GGCC | 6 cut(s) | 367, 521, 964, 1001, 1071, 1220 |
| Bsp13I | TCCGGA | 1 cut(s) | 881 |
| Bsp143I | GATC | 4 cut(s) | 19, 190, 448, 1144 |
| Bsp19I | CCATGG | 2 cut(s) | 27, 148 |
| BspACI | CCGC | 1 cut(s) | 1221 |
| BspANI | GGCC | 6 cut(s) | 367, 521, 964, 1001, 1071, 1220 |
| BspCNI | CTCAG | 3 cut(s) | 799, 907, 1147 |
| BspEI | TCCGGA | 1 cut(s) | 881 |
| BspFNI | CGCG | 1 cut(s) | 536 |
| BspHI | TCATGA | 1 cut(s) | 343 |
| BspLI | GGNNCC | 3 cut(s) | 172, 715, 963 |
| BspMI | ACCTGC | 1 cut(s) | 82 |
| BspPI | GGATC | 1 cut(s) | 185 |
| BspT107I | GGYRCC | 1 cut(s) | 170 |
| BsrDI | GCAATG | 2 cut(s) | 174, 420 |
| BsrI | ACTGG | 3 cut(s) | 118, 252, 1045 |
| BssECI | CCNNGG | 2 cut(s) | 27, 148 |
| BssMI | GATC | 4 cut(s) | 19, 190, 448, 1144 |
| BssT1I | CCWWGG | 2 cut(s) | 27, 148 |
| Bst4CI | ACNGT | 6 cut(s) | 53, 205, 604, 671, 1213, 1251 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 478 |
| BstC8I | GCNNGC | 2 cut(s) | 144, 756 |
| BstDEI | CTNAG | 3 cut(s) | 786, 894, 1155 |
| BstDSI | CCRYGG | 2 cut(s) | 27, 148 |
| BstEII | GGTNACC | 1 cut(s) | 619 |
| BstF5I | GGATG | 1 cut(s) | 474 |
| BstFNI | CGCG | 1 cut(s) | 536 |
| BstHHI | GCGC | 1 cut(s) | 538 |
| BstKTI | GATC | 4 cut(s) | 22, 193, 451, 1147 |
| BstMAI | GTCTC | 1 cut(s) | 376 |
| BstMBI | GATC | 4 cut(s) | 19, 190, 448, 1144 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 220, 478, 1133 |
| BstPI | GGTNACC | 1 cut(s) | 619 |
| BstUI | CGCG | 1 cut(s) | 536 |
| BstV1I | GCAGC | 4 cut(s) | 528, 550, 734, 924 |
| BstX2I | RGATCY | 1 cut(s) | 190 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 167, 512 |
| BstYI | RGATCY | 1 cut(s) | 190 |
| BsuI | GTATCC | 1 cut(s) | 1046 |
| BsuRI | GGCC | 6 cut(s) | 367, 521, 964, 1001, 1071, 1220 |
| BtgI | CCRYGG | 2 cut(s) | 27, 148 |
| BtsCI | GGATG | 1 cut(s) | 474 |
| BtsI | GCAGTG | 1 cut(s) | 285 |
| BtsIMutI | CAGTG | 7 cut(s) | 201, 285, 676, 910, 1195, 1236, 1247 |
| BveI | ACCTGC | 1 cut(s) | 82 |
| Cac8I | GCNNGC | 2 cut(s) | 144, 756 |
| CciI | TCATGA | 1 cut(s) | 343 |
| CfoI | GCGC | 1 cut(s) | 538 |
| Cfr13I | GGNCC | 5 cut(s) | 290, 365, 714, 845, 962 |
| Csp6I | GTAC | 3 cut(s) | 613, 685, 1034 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 315, 350 |
| CviAII | CATG | 6 cut(s) | 28, 149, 344, 410, 476, 506 |
| CviQI | GTAC | 3 cut(s) | 613, 685, 1034 |
| DdeI | CTNAG | 3 cut(s) | 786, 894, 1155 |
| DpnI | GATC | 4 cut(s) | 21, 192, 450, 1146 |
| DpnII | GATC | 4 cut(s) | 19, 190, 448, 1144 |
| DraI | TTTAAA | 1 cut(s) | 267 |
| DraIII | CACNNNGTG | 1 cut(s) | 478 |
| EaeI | YGGCCR | 2 cut(s) | 519, 1069 |
| Eco130I | CCWWGG | 2 cut(s) | 27, 148 |
| Eco47I | GGWCC | 3 cut(s) | 290, 714, 845 |
| Eco57I | CTGAAG | 1 cut(s) | 171 |
| Eco91I | GGTNACC | 1 cut(s) | 619 |
| EcoO109I | RGGNCCY | 2 cut(s) | 845, 962 |
| EcoO65I | GGTNACC | 1 cut(s) | 619 |
| EcoRI | GAATTC | 1 cut(s) | 317 |
| EcoT14I | CCWWGG | 2 cut(s) | 27, 148 |
| ErhI | CCWWGG | 2 cut(s) | 27, 148 |
| FaeI | CATG | 6 cut(s) | 31, 152, 347, 413, 479, 509 |
| FatI | CATG | 6 cut(s) | 27, 148, 343, 409, 475, 505 |
| Fnu4HI | GCNGC | 5 cut(s) | 539, 542, 723, 938, 1221 |
| FokI | GGATG | 1 cut(s) | 481 |
| Fsp4HI | GCNGC | 5 cut(s) | 539, 542, 723, 938, 1221 |
| FspBI | CTAG | 3 cut(s) | 384, 839, 899 |
| GlaI | GCGC | 1 cut(s) | 537 |
| GluI | GCNGC | 5 cut(s) | 539, 542, 723, 938, 1221 |
| GsaI | CCCAGC | 2 cut(s) | 944, 1009 |
| GsuI | CTGGAG | 2 cut(s) | 483, 605 |
| HaeIII | GGCC | 6 cut(s) | 367, 521, 964, 1001, 1071, 1220 |
| HapII | CCGG | 2 cut(s) | 717, 882 |
| HhaI | GCGC | 1 cut(s) | 538 |
| Hin1II | CATG | 6 cut(s) | 31, 152, 347, 413, 479, 509 |
| Hin6I | GCGC | 1 cut(s) | 536 |
| HinP1I | GCGC | 1 cut(s) | 536 |
| HincII | GTYRAC | 2 cut(s) | 1087, 1209 |
| HindII | GTYRAC | 2 cut(s) | 1087, 1209 |
| HindIII | AAGCTT | 1 cut(s) | 140 |
| HinfI | GANTC | 8 cut(s) | 92, 233, 400, 406, 576, 860, 890, 1226 |
| HpaII | CCGG | 2 cut(s) | 717, 882 |
| HphI | GGTGA | 3 cut(s) | 16, 613, 1170 |
| Hpy166II | GTNNAC | 3 cut(s) | 65, 1087, 1209 |
| Hpy188I | TCNGA | 6 cut(s) | 100, 190, 211, 376, 405, 435 |
| Hpy188III | TCNNGA | 6 cut(s) | 327, 344, 452, 573, 584, 882 |
| Hpy8I | GTNNAC | 3 cut(s) | 65, 1087, 1209 |
| HpyAV | CCTTC | 2 cut(s) | 121, 1058 |
| HpyCH4III | ACNGT | 6 cut(s) | 53, 205, 604, 671, 1213, 1251 |
| HpyCH4V | TGCA | 5 cut(s) | 179, 472, 722, 758, 836 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 220, 478, 1133 |
| HpyF3I | CTNAG | 3 cut(s) | 786, 894, 1155 |
| Hsp92II | CATG | 6 cut(s) | 31, 152, 347, 413, 479, 509 |
| HspAI | GCGC | 1 cut(s) | 536 |
| Kpn2I | TCCGGA | 1 cut(s) | 881 |
| Kzo9I | GATC | 4 cut(s) | 19, 190, 448, 1144 |
| LmnI | GCTCC | 2 cut(s) | 730, 751 |
| Lsp1109I | GCAGC | 4 cut(s) | 528, 550, 734, 924 |
| LweI | GCATC | 2 cut(s) | 76, 459 |
| MaeI | CTAG | 3 cut(s) | 384, 839, 899 |
| MaeIII | GTNAC | 3 cut(s) | 439, 619, 1176 |
| MalI | GATC | 4 cut(s) | 21, 192, 450, 1146 |
| MboI | GATC | 4 cut(s) | 19, 190, 448, 1144 |
| MboII | GAAGA | 5 cut(s) | 48, 263, 297, 420, 601 |
| MflI | RGATCY | 1 cut(s) | 190 |
| MlsI | TGGCCA | 1 cut(s) | 1071 |
| MluCI | AATT | 7 cut(s) | 312, 317, 330, 415, 762, 816, 1092 |
| MluNI | TGGCCA | 1 cut(s) | 1071 |
| MlyI | GAGTC | 2 cut(s) | 101, 400 |
| Mox20I | TGGCCA | 1 cut(s) | 1071 |
| MroI | TCCGGA | 1 cut(s) | 881 |
| MroXI | GAANNNNTTC | 1 cut(s) | 820 |
| MscI | TGGCCA | 1 cut(s) | 1071 |
| MseI | TTAA | 6 cut(s) | 155, 228, 266, 678, 743, 1095 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1188 |
| Msp20I | TGGCCA | 1 cut(s) | 1071 |
| MspA1I | CMGCKG | 3 cut(s) | 541, 866, 1223 |
| MspI | CCGG | 2 cut(s) | 717, 882 |
| Mva1269I | GAATGC | 1 cut(s) | 838 |
| MvnI | CGCG | 1 cut(s) | 536 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 220, 478, 1133 |
| NcoI | CCATGG | 2 cut(s) | 27, 148 |
| NdeII | GATC | 4 cut(s) | 19, 190, 448, 1144 |
| NlaIII | CATG | 6 cut(s) | 31, 152, 347, 413, 479, 509 |
| NlaIV | GGNNCC | 3 cut(s) | 172, 715, 963 |
| NmeAIII | GCCGAG | 1 cut(s) | 115 |
| NmuCI | GTSAC | 2 cut(s) | 619, 1176 |
| PagI | TCATGA | 1 cut(s) | 343 |
| PctI | GAATGC | 1 cut(s) | 838 |
| PdmI | GAANNNNTTC | 1 cut(s) | 820 |
| PfeI | GAWTC | 6 cut(s) | 233, 400, 576, 860, 890, 1226 |
| PkrI | GCNGC | 5 cut(s) | 540, 543, 724, 939, 1222 |
| PleI | GAGTC | 2 cut(s) | 100, 400 |
| PpsI | GAGTC | 2 cut(s) | 100, 400 |
| PpuMI | RGGWCCY | 1 cut(s) | 845 |
| PsiI | TTATAA | 1 cut(s) | 254 |
| Psp5II | RGGWCCY | 1 cut(s) | 845 |
| PspEI | GGTNACC | 1 cut(s) | 619 |
| PspFI | CCCAGC | 2 cut(s) | 940, 1005 |
| PspN4I | GGNNCC | 3 cut(s) | 172, 715, 963 |
| PspPI | GGNCC | 5 cut(s) | 290, 365, 714, 845, 962 |
| PspPPI | RGGWCCY | 1 cut(s) | 845 |
| PsuI | RGATCY | 1 cut(s) | 190 |
| PvuII | CAGCTG | 2 cut(s) | 541, 866 |
| RsaI | GTAC | 3 cut(s) | 614, 686, 1035 |
| RsaNI | GTAC | 3 cut(s) | 613, 685, 1034 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1188 |
| SaqAI | TTAA | 6 cut(s) | 155, 228, 266, 678, 743, 1095 |
| SatI | GCNGC | 5 cut(s) | 539, 542, 723, 938, 1221 |
| Sau3AI | GATC | 4 cut(s) | 19, 190, 448, 1144 |
| Sau96I | GGNCC | 5 cut(s) | 290, 365, 714, 845, 962 |
| SchI | GAGTC | 2 cut(s) | 101, 400 |
| SfaNI | GCATC | 2 cut(s) | 76, 459 |
| SinI | GGWCC | 3 cut(s) | 290, 714, 845 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1188 |
| SmlI | CTYRAG | 2 cut(s) | 325, 771 |
| SmoI | CTYRAG | 2 cut(s) | 325, 771 |
| SpeI | ACTAGT | 1 cut(s) | 838 |
| Sse9I | AATT | 7 cut(s) | 312, 317, 330, 415, 762, 816, 1092 |
| SsiI | CCGC | 1 cut(s) | 1221 |
| SspMI | CTAG | 3 cut(s) | 384, 839, 899 |
| StyI | CCWWGG | 2 cut(s) | 27, 148 |
| TaaI | ACNGT | 6 cut(s) | 53, 205, 604, 671, 1213, 1251 |
| TaqI | TCGA | 1 cut(s) | 850 |
| TaqII | GACCGA | 3 cut(s) | 307, 1104, 1137 |
| TasI | AATT | 7 cut(s) | 312, 317, 330, 415, 762, 816, 1092 |
| TatI | WGTACW | 2 cut(s) | 612, 684 |
| TauI | GCSGC | 1 cut(s) | 1223 |
| TfiI | GAWTC | 6 cut(s) | 233, 400, 576, 860, 890, 1226 |
| Tru1I | TTAA | 6 cut(s) | 155, 228, 266, 678, 743, 1095 |
| Tru9I | TTAA | 6 cut(s) | 155, 228, 266, 678, 743, 1095 |
| TscAI | CASTG | 7 cut(s) | 208, 285, 676, 910, 1195, 1236, 1254 |
| TseFI | GTSAC | 2 cut(s) | 619, 1176 |
| TseI | GCWGC | 4 cut(s) | 538, 541, 722, 937 |
| Tsp45I | GTSAC | 2 cut(s) | 619, 1176 |
| TspDTI | ATGAA | 5 cut(s) | 291, 332, 409, 684, 1077 |
| TspRI | CASTG | 7 cut(s) | 208, 285, 676, 910, 1195, 1236, 1254 |
| VpaK11BI | GGWCC | 3 cut(s) | 290, 714, 845 |
| XapI | RAATTY | 2 cut(s) | 317, 415 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 244, 580 |
| XmnI | GAANNNNTTC | 1 cut(s) | 820 |
| XspI | CTAG | 3 cut(s) | 384, 839, 899 |