4-coumarate--CoA ligase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rep_fac-A_C | PF08646 | 235 - 310 | 4.4e-06 | Replication factor-A C terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 147 |
| AccI | GTMKAC | 1 cut(s) | 204 |
| AclWI | GGATC | 1 cut(s) | 682 |
| AcoI | YGGCCR | 1 cut(s) | 624 |
| AcsI | RAATTY | 2 cut(s) | 367, 491 |
| AfaI | GTAC | 1 cut(s) | 613 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 147 |
| AflII | CTTAAG | 1 cut(s) | 752 |
| AflIII | ACRYGT | 1 cut(s) | 258 |
| AgeI | ACCGGT | 1 cut(s) | 770 |
| AgsI | TTSAA | 3 cut(s) | 121, 620, 735 |
| AluBI | AGCT | 4 cut(s) | 413, 578, 809, 895 |
| AluI | AGCT | 4 cut(s) | 413, 578, 809, 895 |
| Alw21I | GWGCWC | 1 cut(s) | 462 |
| Alw26I | GTCTC | 2 cut(s) | 145, 874 |
| AlwI | GGATC | 1 cut(s) | 682 |
| AoxI | GGCC | 3 cut(s) | 184, 523, 624 |
| ApeKI | GCWGC | 2 cut(s) | 512, 892 |
| ApoI | RAATTY | 2 cut(s) | 367, 491 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 816, 848 |
| AseI | ATTAAT | 1 cut(s) | 779 |
| AsiGI | ACCGGT | 1 cut(s) | 770 |
| AsuHPI | GGTGA | 4 cut(s) | 416, 608, 785, 826 |
| AsuII | TTCGAA | 1 cut(s) | 495 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 282, 315 |
| Bbv12I | GWGCWC | 1 cut(s) | 462 |
| BbvI | GCAGC | 2 cut(s) | 524, 904 |
| BccI | CCATC | 2 cut(s) | 176, 868 |
| BceAI | ACGGC | 1 cut(s) | 639 |
| BciVI | GTATCC | 1 cut(s) | 948 |
| BclI | TGATCA | 1 cut(s) | 540 |
| BcoDI | GTCTC | 2 cut(s) | 145, 874 |
| BfaI | CTAG | 1 cut(s) | 414 |
| BfrI | CTTAAG | 1 cut(s) | 752 |
| BfuI | GTATCC | 1 cut(s) | 948 |
| BisI | GCNGC | 2 cut(s) | 513, 893 |
| BlsI | GCNGC | 2 cut(s) | 514, 894 |
| BmsI | GCATC | 3 cut(s) | 146, 543, 912 |
| BpmI | CTGGAG | 2 cut(s) | 677, 941 |
| Bpu10I | CCTNAGC | 2 cut(s) | 21, 63 |
| Bpu14I | TTCGAA | 1 cut(s) | 495 |
| BsaBI | GATNNNNATC | 1 cut(s) | 852 |
| BsaWI | WCCGGW | 1 cut(s) | 770 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 147 |
| Bse118I | RCCGGY | 1 cut(s) | 770 |
| Bse1I | ACTGG | 4 cut(s) | 334, 455, 694, 701 |
| Bse3DI | GCAATG | 1 cut(s) | 83 |
| Bse8I | GATNNNNATC | 1 cut(s) | 852 |
| BseGI | GGATG | 1 cut(s) | 137 |
| BseJI | GATNNNNATC | 1 cut(s) | 852 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 147 |
| BseMI | GCAATG | 1 cut(s) | 83 |
| BseMII | CTCAG | 3 cut(s) | 35, 54, 570 |
| BseNI | ACTGG | 4 cut(s) | 334, 455, 694, 701 |
| BseRI | GAGGAG | 1 cut(s) | 388 |
| BseXI | GCAGC | 2 cut(s) | 524, 904 |
| BshFI | GGCC | 3 cut(s) | 186, 525, 626 |
| BshTI | ACCGGT | 1 cut(s) | 770 |
| BsiHKAI | GWGCWC | 1 cut(s) | 462 |
| BsiSI | CCGG | 1 cut(s) | 771 |
| BslFI | GGGAC | 1 cut(s) | 228 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 147 |
| BsmAI | GTCTC | 2 cut(s) | 145, 874 |
| BsmFI | GGGAC | 1 cut(s) | 228 |
| BsnI | GGCC | 3 cut(s) | 186, 525, 626 |
| Bsp119I | TTCGAA | 1 cut(s) | 495 |
| Bsp1286I | GDGCHC | 1 cut(s) | 462 |
| Bsp143I | GATC | 2 cut(s) | 540, 687 |
| BspANI | GGCC | 3 cut(s) | 186, 525, 626 |
| BspCNI | CTCAG | 3 cut(s) | 34, 55, 571 |
| BspHI | TCATGA | 1 cut(s) | 537 |
| BspPI | GGATC | 1 cut(s) | 682 |
| BspT104I | TTCGAA | 1 cut(s) | 495 |
| BspTI | CTTAAG | 1 cut(s) | 752 |
| BsrDI | GCAATG | 1 cut(s) | 83 |
| BsrFI | RCCGGY | 1 cut(s) | 770 |
| BsrI | ACTGG | 4 cut(s) | 334, 455, 694, 701 |
| BssAI | RCCGGY | 1 cut(s) | 770 |
| BssMI | GATC | 2 cut(s) | 540, 687 |
| Bst4CI | ACNGT | 9 cut(s) | 105, 147, 170, 230, 295, 319, 444, 670, 936 |
| Bst6I | CTCTTC | 3 cut(s) | 48, 204, 631 |
| BstAFI | CTTAAG | 1 cut(s) | 752 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 85 |
| BstBI | TTCGAA | 1 cut(s) | 495 |
| BstC8I | GCNNGC | 1 cut(s) | 462 |
| BstDEI | CTNAG | 3 cut(s) | 21, 63, 579 |
| BstF5I | GGATG | 1 cut(s) | 137 |
| BstKTI | GATC | 2 cut(s) | 543, 690 |
| BstMAI | GTCTC | 2 cut(s) | 145, 874 |
| BstMBI | GATC | 2 cut(s) | 540, 687 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 85, 531 |
| BstNSI | RCATGY | 3 cut(s) | 221, 262, 534 |
| BstV1I | GCAGC | 2 cut(s) | 524, 904 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 271 |
| BsuI | GTATCC | 1 cut(s) | 948 |
| BsuRI | GGCC | 3 cut(s) | 186, 525, 626 |
| BtsCI | GGATG | 1 cut(s) | 137 |
| BtsI | GCAGTG | 1 cut(s) | 678 |
| BtsIMutI | CAGTG | 5 cut(s) | 175, 327, 462, 675, 678 |
| Cac8I | GCNNGC | 1 cut(s) | 462 |
| CciI | TCATGA | 1 cut(s) | 537 |
| Cfr10I | RCCGGY | 1 cut(s) | 770 |
| Csp6I | GTAC | 1 cut(s) | 612 |
| CspAI | ACCGGT | 1 cut(s) | 770 |
| CviAII | CATG | 7 cut(s) | 134, 218, 259, 531, 538, 794, 816 |
| CviQI | GTAC | 1 cut(s) | 612 |
| DdeI | CTNAG | 3 cut(s) | 21, 63, 579 |
| DpnI | GATC | 2 cut(s) | 542, 689 |
| DpnII | GATC | 2 cut(s) | 540, 687 |
| DraI | TTTAAA | 1 cut(s) | 745 |
| EaeI | YGGCCR | 1 cut(s) | 624 |
| Eam1104I | CTCTTC | 3 cut(s) | 48, 204, 631 |
| EarI | CTCTTC | 3 cut(s) | 48, 204, 631 |
| Eco32I | GATATC | 1 cut(s) | 385 |
| EcoRV | GATATC | 1 cut(s) | 385 |
| EcoT22I | ATGCAT | 2 cut(s) | 139, 536 |
| FaeI | CATG | 7 cut(s) | 137, 221, 262, 534, 541, 797, 819 |
| FaqI | GGGAC | 1 cut(s) | 228 |
| FatI | CATG | 7 cut(s) | 133, 217, 258, 530, 537, 793, 815 |
| FbaI | TGATCA | 1 cut(s) | 540 |
| FblI | GTMKAC | 1 cut(s) | 204 |
| Fnu4HI | GCNGC | 2 cut(s) | 513, 893 |
| FokI | GGATG | 1 cut(s) | 124 |
| Fsp4HI | GCNGC | 2 cut(s) | 513, 893 |
| FspBI | CTAG | 1 cut(s) | 414 |
| GluI | GCNGC | 2 cut(s) | 513, 893 |
| GsuI | CTGGAG | 2 cut(s) | 677, 941 |
| HaeIII | GGCC | 3 cut(s) | 186, 525, 626 |
| HapII | CCGG | 1 cut(s) | 771 |
| Hin1II | CATG | 7 cut(s) | 137, 221, 262, 534, 541, 797, 819 |
| HincII | GTYRAC | 2 cut(s) | 205, 486 |
| HindII | GTYRAC | 2 cut(s) | 205, 486 |
| HinfI | GANTC | 2 cut(s) | 242, 341 |
| HpaII | CCGG | 1 cut(s) | 771 |
| HphI | GGTGA | 4 cut(s) | 416, 608, 785, 826 |
| Hpy166II | GTNNAC | 3 cut(s) | 205, 291, 486 |
| Hpy188I | TCNGA | 3 cut(s) | 304, 389, 873 |
| Hpy188III | TCNNGA | 6 cut(s) | 141, 538, 548, 586, 842, 920 |
| Hpy8I | GTNNAC | 3 cut(s) | 205, 291, 486 |
| Hpy99I | CGWCG | 1 cut(s) | 209 |
| HpyAV | CCTTC | 2 cut(s) | 272, 406 |
| HpyCH4III | ACNGT | 9 cut(s) | 105, 147, 170, 230, 295, 319, 444, 670, 936 |
| HpyCH4V | TGCA | 4 cut(s) | 137, 534, 678, 802 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 85, 531 |
| HpyF3I | CTNAG | 3 cut(s) | 21, 63, 579 |
| Hsp92II | CATG | 7 cut(s) | 137, 221, 262, 534, 541, 797, 819 |
| Ksp22I | TGATCA | 1 cut(s) | 540 |
| Kzo9I | GATC | 2 cut(s) | 540, 687 |
| Lsp1109I | GCAGC | 2 cut(s) | 524, 904 |
| LweI | GCATC | 3 cut(s) | 146, 543, 912 |
| MaeI | CTAG | 1 cut(s) | 414 |
| MaeIII | GTNAC | 8 cut(s) | 92, 170, 313, 404, 505, 596, 818, 832 |
| MalI | GATC | 2 cut(s) | 542, 689 |
| MboI | GATC | 2 cut(s) | 540, 687 |
| MboII | GAAGA | 5 cut(s) | 65, 221, 287, 509, 648 |
| MfeI | CAATTG | 1 cut(s) | 907 |
| MhlI | GDGCHC | 1 cut(s) | 462 |
| MnlI | CCTC | 9 cut(s) | 30, 197, 205, 232, 366, 369, 373, 701, 719 |
| Mph1103I | ATGCAT | 2 cut(s) | 139, 536 |
| MseI | TTAA | 6 cut(s) | 233, 438, 479, 744, 753, 779 |
| MslI | CAYNNNNRTG | 1 cut(s) | 872 |
| MspCI | CTTAAG | 1 cut(s) | 752 |
| MspI | CCGG | 1 cut(s) | 771 |
| MunI | CAATTG | 1 cut(s) | 907 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 85, 531 |
| NdeII | GATC | 2 cut(s) | 540, 687 |
| NlaIII | CATG | 7 cut(s) | 137, 221, 262, 534, 541, 797, 819 |
| NmuCI | GTSAC | 5 cut(s) | 92, 170, 404, 596, 832 |
| NsiI | ATGCAT | 2 cut(s) | 139, 536 |
| NspI | RCATGY | 3 cut(s) | 221, 262, 534 |
| NspV | TTCGAA | 1 cut(s) | 495 |
| PagI | TCATGA | 1 cut(s) | 537 |
| PciI | ACATGT | 1 cut(s) | 258 |
| PfeI | GAWTC | 2 cut(s) | 242, 341 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 147 |
| PinAI | ACCGGT | 1 cut(s) | 770 |
| PkrI | GCNGC | 2 cut(s) | 514, 894 |
| PscI | ACATGT | 1 cut(s) | 258 |
| PshBI | ATTAAT | 1 cut(s) | 779 |
| RsaI | GTAC | 1 cut(s) | 613 |
| RsaNI | GTAC | 1 cut(s) | 612 |
| RseI | CAYNNNNRTG | 1 cut(s) | 872 |
| SalI | GTCGAC | 1 cut(s) | 203 |
| SaqAI | TTAA | 6 cut(s) | 233, 438, 479, 744, 753, 779 |
| SatI | GCNGC | 2 cut(s) | 513, 893 |
| Sau3AI | GATC | 2 cut(s) | 540, 687 |
| SduI | GDGCHC | 1 cut(s) | 462 |
| SetI | ASST | 8 cut(s) | 398, 415, 485, 580, 598, 617, 811, 897 |
| SfaNI | GCATC | 3 cut(s) | 146, 543, 912 |
| SfuI | TTCGAA | 1 cut(s) | 495 |
| SgrAI | CRCCGGYG | 1 cut(s) | 770 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 872 |
| SmlI | CTYRAG | 1 cut(s) | 752 |
| SmoI | CTYRAG | 1 cut(s) | 752 |
| SspMI | CTAG | 1 cut(s) | 414 |
| TaaI | ACNGT | 9 cut(s) | 105, 147, 170, 230, 295, 319, 444, 670, 936 |
| TaqI | TCGA | 5 cut(s) | 204, 495, 587, 686, 841 |
| TfiI | GAWTC | 2 cut(s) | 242, 341 |
| Tru1I | TTAA | 6 cut(s) | 233, 438, 479, 744, 753, 779 |
| Tru9I | TTAA | 6 cut(s) | 233, 438, 479, 744, 753, 779 |
| TscAI | CASTG | 5 cut(s) | 175, 334, 462, 675, 685 |
| TseFI | GTSAC | 5 cut(s) | 92, 170, 404, 596, 832 |
| TseI | GCWGC | 2 cut(s) | 512, 892 |
| Tsp45I | GTSAC | 5 cut(s) | 92, 170, 404, 596, 832 |
| TspDTI | ATGAA | 3 cut(s) | 122, 582, 695 |
| TspRI | CASTG | 5 cut(s) | 175, 334, 462, 675, 685 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 147 |
| Vha464I | CTTAAG | 1 cut(s) | 752 |
| VspI | ATTAAT | 1 cut(s) | 779 |
| XapI | RAATTY | 2 cut(s) | 367, 491 |
| XceI | RCATGY | 3 cut(s) | 221, 262, 534 |
| XmiI | GTMKAC | 1 cut(s) | 204 |
| XspI | CTAG | 1 cut(s) | 414 |
| Zsp2I | ATGCAT | 2 cut(s) | 139, 536 |