Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000517

Physical Location & Seq

Genomic Coordinates Reverse (-)

28290876 .. 28294928

Gene Structure 4053 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00022890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGAGAAATCTGGGTATGGCCGTGATGGAGTTTTCAGGTCACTCAGACCACCTCTGGTATTTCCCAGAGACCGAAATCTCACCATGGTCTCTTTCCTCTTCAAAAACTCTTCTTCTTATCCACACAAACCTGCCCTCATTGATGCCGAGTCCTCTGAAACCCTGTCCTTCTCCCAGCTCAAGTCAATGGTCATCAAGGTTGCACATGGCTTAATCCATCTGGGTATTAAGAAAAACGACGTGGTTCTGATTTTCGCTCCCAATTCAATCCAGTTTCCCATTTGTTTCCTTGGAATTATTGCAATCGGTGCCATTGTAACAACTTCAAATCCTCTCTACACGGTTTCAGAGCTTTCCAAGCAAGTCAAGGATTCCAATCCAAAACTGGTTATAACTGTGCCTGAATTGTGGGAAAAGGTGAAGGGTTTGAATCTTCCAGCAGTGATTTTAGGACCGAAAGGTTCATCTTCCCAAATTGAATCCAGCTCAAGAATTGTGGGTTTTCATGATTTGGTTCAGTTATCTGGGCCTGTCTCGGATTTCCCTAGTGTAAATGTTAAGCAGACTGATACTGCTGCGCTGTTGTACTCTTCGGGTACAACAGGCCTCAGCAAAGGTGTGATTCTGACTCATGGGAATTTCATTGCTTCCTCTCTGATGATCACACATGATCAAGAAGTGGCTGGAGAGATGCACCATGTGTTTCTTTGTGTGTTGCCAATGTTCCATGTGTTTGGATTGGCCGTCATCACTTACGCGCAGCTGCGAAAGGGAAATGCTGTGATTTCGATGTCCAGATTCAATCTGGAGAAGATTTTGATGACTGTTGAGAAGTACAAGGTCACCCATTTGTGGGTTGTGCCTCCTATTATACTTGCTCTGTCAAAGGACAGTGTGGTTAAGAAGTACAGTCTTTCATCTTTGAAGCATATTGGGTCTGGTGCAGCTCCTCTGGGGAAAGAGTTAATGGAGGAGTGTGCAAAAATTATTCCTCAAGGTGCAGTTACTCAGGGTTATGGTATGACAGAAACCTGTGGAATTGTTTCAGTTGAGAATTCACTAGTAGGACCTCGACATAGTGGTTCAGCTGGCACTCTTGTTTCTGGAGTTGAATCTCAGATAGTCAGTGTAGATACACTGAAACCTCTCCCGCCAAAGCAGTTGGGGGAAATATGGGTTAGGGGACCGAATATGATGATGGGTTATTTTAACAACCCACAGGCCACCCAGCTAACTTTAGATAAAAATGGTTGGGTACATACTGGAGATCTCGGATACTTTGATGAAAGTGGCCAACTTTTTGTGGTTGACCGAATTAAAGAACTCATTAAGTATAAAGGTTTTCAGGTAGCACCAGCTGAACTTGAAGGCCTGTTAGTTTGTCACCCTGAAATATTAGACGCGGTTGTCATCCCATTTCCTGATGCTGAAGCTGGTGAGGTCCCTGTTGCATATGTTGTGCGCTCGCCAAACAGTTCACTGACCGAAGAAGATATCAAGAGTTTTATAGCGAGTCAGGTTGCATCTTTCAAAAGACTGCGACGAGTGACATTCATAAACACTGTCCCCAAGTCGGCATCAGGAAAAATCCTCAGAAGAGAGCTCATCGAGAAAGTACGGTCCAAAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004321 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0008150 GO:0008152 GO:0009058 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016053 GO:0016408 GO:0016740 GO:0016746 GO:0016747 GO:0019752 GO:0032787 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00130 ko00360 ko00940 ko01100 ko01110 map00130 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

543

Amino Acids

59.15

Weight (kDa)

9.0

Isoelectric Point (pI)

36.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	35 - 403	3.1e-88	AMP-binding enzyme
AMP-binding_C	PF13193	454 - 529	5.9e-16	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000517)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G05160
fragaria_vesca	FvH4_3g30980 FvH4_3g30980 FvH4_3g30980 FvH4_3g30980 FvH4_3g30980 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460 FvH4_6g16460
malus_domestica	MD00G1033000.v1.1 MD00G1033100.v1.1 MD11G1145900.v1.1
prunus_persica	Prupe.1G562500_v2.0.a1 Prupe.6G109000_v2.0.a1 Prupe.6G220600_v2.0.a1 Prupe.7G129300_v2.0.a1
pyrus_communis	pycom10g19750 pycom11g11900
rosa_chinensis	RchiOBHm_Chr4g0437371 RchiOBHm_Chr5g0057221 RchiOBHm_Chr5g0057231 RchiOBHm_Chr5g0057411 RchiOBHm_Chr5g0057421 RchiOBHm_Chr5g0057431 RchiOBHm_Chr5g0057541 RchiOBHm_Chr5g0057621 RchiOBHm_Chr5g0057631 RchiOBHm_Chr7g0218731
rosa_laevigata	RLG00000024275 RLG00000035153 RLG00000035162 RLG00000035163
rosa_multiflora	Rmu_co8225990.1_g000001 Rmu_co8293931.1_g000001 Rmu_co8305349.1_g000001 Rmu_sc0001058.1_g000006 Rmu_sc0001334.1_g000005 Rmu_sc0002486.1_g000002 Rmu_sc0002486.1_g000004 Rmu_sc0002486.1_g000006 Rmu_sc0003730.1_g000007 Rmu_sc0009763.1_g000003 Rmu_sc0012503.1_g000004 Rmu_sc0041005.1_g000001
rosa_roxburghii	Rroxscaffold_1G00022890 Rroxscaffold_1G00022900 Rroxscaffold_1G00023020 Rroxscaffold_1G00039850 Rroxscaffold_2G00089660 Rroxscaffold_6G00410920 Rroxscaffold_7G00210330
rosa_rugosa	Rorug01G0121100 Rorug05G0306100 Rorug05G0306200 Rorug05G0306700 Rorug05G0308100
rosa_samantha	Rh1AG142700 Rh1BG111300 Rh1DG148300 Rh2DG519700 Rh3DG192200 Rh5BG387400 Rh5BG387600 Rh5CG409800 Rh5CG409900 Rh5CG410000 Rh5CG411000 Rh5CG411600 Rh5CG411700 Rh5DG400500 Rh5DG400600 Rh5DG400700 Rh5DG401700 Rh5DG401800 Rh7CG338500
rosa_wichuraiana	Rw5G035330 Rw5G035540 Rw5G035550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	392
AasI	GACNNNNNNGTC	1 cut(s)	1406
Acc36I	ACCTGC	1 cut(s)	139
AccB1I	GGYRCC	1 cut(s)	308
AccII	CGCG	2 cut(s)	758, 1403
AciI	CCGC	2 cut(s)	1151, 1403
AcoI	YGGCCR	3 cut(s)	19, 741, 1291
AcsI	RAATTY	2 cut(s)	637, 1054
AcuI	CTGAAG	1 cut(s)	1449
AdeI	CACNNNGTG	1 cut(s)	700
AfaI	GTAC	6 cut(s)	587, 598, 836, 908, 1257, 1617
AfiI	CCNNNNNNNGG	3 cut(s)	852, 853, 1573
AhlI	ACTAGT	1 cut(s)	1060
AjiI	CACGTC	1 cut(s)	241
Alw21I	GWGCWC	1 cut(s)	1605
Alw26I	GTCTC	3 cut(s)	63, 94, 538
AoxI	GGCC	7 cut(s)	19, 527, 604, 741, 1221, 1291, 1369
ApeKI	GCWGC	4 cut(s)	575, 760, 763, 944
ApoI	RAATTY	2 cut(s)	637, 1054
Asp700I	GAANNNNTTC	1 cut(s)	1042
AspLEI	GCGC	3 cut(s)	580, 760, 1464
AspS9I	GGNCC	6 cut(s)	452, 527, 1067, 1184, 1441, 1620
AsuHPI	GGTGA	5 cut(s)	73, 430, 835, 1376, 1448
AvaII	GGWCC	5 cut(s)	452, 1067, 1184, 1441, 1620
BalI	TGGCCA	1 cut(s)	1293
BanI	GGYRCC	1 cut(s)	308
BanII	GRGCYC	1 cut(s)	1605
Bbv12I	GWGCWC	1 cut(s)	1605
BbvCI	CCTCAGC	1 cut(s)	608
BbvI	GCAGC	4 cut(s)	562, 750, 772, 956
BccI	CCATC	3 cut(s)	20, 225, 1192
BceAI	ACGGC	2 cut(s)	6, 728
BciVI	GTATCC	1 cut(s)	1268
BclI	TGATCA	2 cut(s)	660, 670
BcoDI	GTCTC	3 cut(s)	63, 94, 538
BcuI	ACTAGT	1 cut(s)	1060
BfaI	CTAG	2 cut(s)	546, 1061
BfuAI	ACCTGC	1 cut(s)	139
BfuI	GTATCC	1 cut(s)	1268
BglII	AGATCT	1 cut(s)	1267
BisI	GCNGC	4 cut(s)	576, 761, 764, 945
BlsI	GCNGC	4 cut(s)	577, 762, 765, 946
Bme18I	GGWCC	5 cut(s)	452, 1067, 1184, 1441, 1620
BmgBI	CACGTC	1 cut(s)	241
BmgT120I	GGNCC	6 cut(s)	452, 527, 1067, 1184, 1441, 1620
BmiI	GGNNCC	3 cut(s)	310, 1185, 1443
BmsI	GCATC	5 cut(s)	133, 681, 1414, 1532, 1586
BpmI	CTGGAG	4 cut(s)	705, 827, 1125, 1284
Bpu10I	CCTNAGC	1 cut(s)	608
BpuEI	CTTGAG	3 cut(s)	164, 472, 978
BsaBI	GATNNNNATC	1 cut(s)	375
BsaI	GGTCTC	2 cut(s)	63, 94
BsaJI	CCNNGG	2 cut(s)	84, 289
Bsc4I	CCNNNNNNNGG	3 cut(s)	852, 853, 1573
Bse1I	ACTGG	3 cut(s)	271, 390, 1267
Bse3DI	GCAATG	1 cut(s)	642
Bse8I	GATNNNNATC	1 cut(s)	375
BseDI	CCNNGG	2 cut(s)	84, 289
BseGI	GGATG	1 cut(s)	1410
BseJI	GATNNNNATC	1 cut(s)	375
BseLI	CCNNNNNNNGG	3 cut(s)	852, 853, 1573
BseMI	GCAATG	1 cut(s)	642
BseMII	CTCAG	5 cut(s)	58, 622, 1022, 1130, 1606
BseNI	ACTGG	3 cut(s)	271, 390, 1267
BseRI	GAGGAG	2 cut(s)	939, 986
BseXI	GCAGC	4 cut(s)	562, 750, 772, 956
BseYI	CCCAGC	2 cut(s)	174, 1227
BsgI	GTGCAG	2 cut(s)	963, 1020
Bsh1236I	CGCG	2 cut(s)	758, 1403
BshFI	GGCC	7 cut(s)	21, 529, 606, 743, 1223, 1293, 1371
BshNI	GGYRCC	1 cut(s)	308
BsiHKAI	GWGCWC	1 cut(s)	1605
BslFI	GGGAC	3 cut(s)	1197, 1427, 1550
BslI	CCNNNNNNNGG	3 cut(s)	852, 853, 1573
BsmAI	GTCTC	3 cut(s)	63, 94, 538
BsmFI	GGGAC	3 cut(s)	1197, 1427, 1550
BsnI	GGCC	7 cut(s)	21, 529, 606, 743, 1223, 1293, 1371
Bso31I	GGTCTC	2 cut(s)	63, 94
Bsp1286I	GDGCHC	1 cut(s)	1605
Bsp143I	GATC	3 cut(s)	660, 670, 1267
Bsp19I	CCATGG	1 cut(s)	84
BspACI	CCGC	2 cut(s)	1151, 1403
BspANI	GGCC	7 cut(s)	21, 529, 606, 743, 1223, 1293, 1371
BspCNI	CTCAG	5 cut(s)	57, 621, 1021, 1129, 1605
BspFNI	CGCG	2 cut(s)	758, 1403
BspHI	TCATGA	1 cut(s)	505
BspLI	GGNNCC	3 cut(s)	310, 1185, 1443
BspMI	ACCTGC	1 cut(s)	139
BspT107I	GGYRCC	1 cut(s)	308
BspTNI	GGTCTC	2 cut(s)	63, 94
BsrDI	GCAATG	1 cut(s)	642
BsrI	ACTGG	3 cut(s)	271, 390, 1267
BssECI	CCNNGG	2 cut(s)	84, 289
BssMI	GATC	3 cut(s)	660, 670, 1267
BssT1I	CCWWGG	2 cut(s)	84, 289
Bst4CI	ACNGT	8 cut(s)	343, 397, 826, 893, 911, 1475, 1564, 1620
Bst6I	CTCTTC	4 cut(s)	104, 115, 595, 1591
BstAPI	GCANNNNNTGC	1 cut(s)	308
BstC8I	GCNNGC	2 cut(s)	1090, 1466
BstDEI	CTNAG	5 cut(s)	44, 608, 1008, 1116, 1592
BstDSI	CCRYGG	1 cut(s)	84
BstEII	GGTNACC	1 cut(s)	841
BstF5I	GGATG	1 cut(s)	1410
BstFNI	CGCG	2 cut(s)	758, 1403
BstHHI	GCGC	3 cut(s)	580, 760, 1464
BstKTI	GATC	3 cut(s)	663, 673, 1270
BstMAI	GTCTC	3 cut(s)	63, 94, 538
BstMBI	GATC	3 cut(s)	660, 670, 1267
BstMWI	GCNNNNNNNGC	2 cut(s)	308, 358
BstPI	GGTNACC	1 cut(s)	841
BstUI	CGCG	2 cut(s)	758, 1403
BstV1I	GCAGC	4 cut(s)	562, 750, 772, 956
BstX2I	RGATCY	1 cut(s)	1267
BstXI	CCANNNNNNTGG	1 cut(s)	734
BstYI	RGATCY	1 cut(s)	1267
BsuI	GTATCC	1 cut(s)	1268
BsuRI	GGCC	7 cut(s)	21, 529, 606, 743, 1223, 1293, 1371
BtgI	CCRYGG	1 cut(s)	84
BtrI	CACGTC	1 cut(s)	241
BtsCI	GGATG	1 cut(s)	1410
BtsI	GCAGTG	1 cut(s)	447
BtsIMutI	CAGTG	6 cut(s)	447, 898, 1132, 1136, 1478, 1560
BveI	ACCTGC	1 cut(s)	139
Cac8I	GCNNGC	2 cut(s)	1090, 1466
CciI	TCATGA	1 cut(s)	505
CfoI	GCGC	3 cut(s)	580, 760, 1464
Cfr13I	GGNCC	6 cut(s)	452, 527, 1067, 1184, 1441, 1620
CseI	GACGC	1 cut(s)	1409
Csp6I	GTAC	6 cut(s)	586, 597, 835, 907, 1256, 1616
CspCI	CAANNNNNGTGG	2 cut(s)	477, 512
CviAII	CATG	7 cut(s)	85, 206, 506, 632, 668, 698, 728
CviQI	GTAC	6 cut(s)	586, 597, 835, 907, 1256, 1616
DdeI	CTNAG	5 cut(s)	44, 608, 1008, 1116, 1592
DpnI	GATC	3 cut(s)	662, 672, 1269
DpnII	GATC	3 cut(s)	660, 670, 1267
DraIII	CACNNNGTG	1 cut(s)	700
DrdI	GACNNNNNNGTC	1 cut(s)	1406
DseDI	GACNNNNNNGTC	1 cut(s)	1406
EaeI	YGGCCR	3 cut(s)	19, 741, 1291
Eam1104I	CTCTTC	4 cut(s)	104, 115, 595, 1591
EarI	CTCTTC	4 cut(s)	104, 115, 595, 1591
Ecl136II	GAGCTC	1 cut(s)	1603
Eco130I	CCWWGG	2 cut(s)	84, 289
Eco147I	AGGCCT	2 cut(s)	606, 1371
Eco24I	GRGCYC	1 cut(s)	1605
Eco31I	GGTCTC	2 cut(s)	63, 94
Eco32I	GATATC	1 cut(s)	1495
Eco47I	GGWCC	5 cut(s)	452, 1067, 1184, 1441, 1620
Eco53kI	GAGCTC	1 cut(s)	1603
Eco57I	CTGAAG	1 cut(s)	1449
Eco91I	GGTNACC	1 cut(s)	841
EcoICRI	GAGCTC	1 cut(s)	1603
EcoO109I	RGGNCCY	2 cut(s)	1067, 1441
EcoO65I	GGTNACC	1 cut(s)	841
EcoRI	GAATTC	1 cut(s)	1054
EcoRV	GATATC	1 cut(s)	1495
EcoT14I	CCWWGG	2 cut(s)	84, 289
EcoT38I	GRGCYC	1 cut(s)	1605
ErhI	CCWWGG	2 cut(s)	84, 289
FaeI	CATG	7 cut(s)	88, 209, 509, 635, 671, 701, 731
FaqI	GGGAC	3 cut(s)	1197, 1427, 1550
FatI	CATG	7 cut(s)	84, 205, 505, 631, 667, 697, 727
FauI	CCCGC	1 cut(s)	1158
FauNDI	CATATG	1 cut(s)	1453
FbaI	TGATCA	2 cut(s)	660, 670
Fnu4HI	GCNGC	4 cut(s)	576, 761, 764, 945
FokI	GGATG	1 cut(s)	1397
FriOI	GRGCYC	1 cut(s)	1605
Fsp4HI	GCNGC	4 cut(s)	576, 761, 764, 945
FspBI	CTAG	2 cut(s)	546, 1061
GlaI	GCGC	3 cut(s)	579, 759, 1463
GluI	GCNGC	4 cut(s)	576, 761, 764, 945
GsaI	CCCAGC	2 cut(s)	178, 1231
GsuI	CTGGAG	4 cut(s)	705, 827, 1125, 1284
HaeIII	GGCC	7 cut(s)	21, 529, 606, 743, 1223, 1293, 1371
HgaI	GACGC	1 cut(s)	1409
HhaI	GCGC	3 cut(s)	580, 760, 1464
Hin1II	CATG	7 cut(s)	88, 209, 509, 635, 671, 701, 731
Hin6I	GCGC	3 cut(s)	578, 758, 1462
HinP1I	GCGC	3 cut(s)	578, 758, 1462
HincII	GTYRAC	1 cut(s)	1309
HindII	GTYRAC	1 cut(s)	1309
HinfI	GANTC	9 cut(s)	149, 371, 430, 479, 622, 628, 798, 1112, 1513
HphI	GGTGA	5 cut(s)	73, 430, 835, 1376, 1448
Hpy166II	GTNNAC	2 cut(s)	1309, 1478
Hpy8I	GTNNAC	2 cut(s)	1309, 1478
Hpy99I	CGWCG	2 cut(s)	242, 1545
HpyAV	CCTTC	3 cut(s)	178, 415, 1361
HpyCH4III	ACNGT	8 cut(s)	343, 397, 826, 893, 911, 1475, 1564, 1620
HpyCH4IV	ACGT	1 cut(s)	240
HpyCH4V	TGCA	8 cut(s)	203, 302, 694, 944, 980, 1001, 1451, 1523
HpyF10VI	GCNNNNNNNGC	2 cut(s)	308, 358
HpyF3I	CTNAG	5 cut(s)	44, 608, 1008, 1116, 1592
HpySE526I	ACGT	1 cut(s)	240
Hsp92II	CATG	7 cut(s)	88, 209, 509, 635, 671, 701, 731
HspAI	GCGC	3 cut(s)	578, 758, 1462
Ksp22I	TGATCA	2 cut(s)	660, 670
Kzo9I	GATC	3 cut(s)	660, 670, 1267
LmnI	GCTCC	2 cut(s)	262, 952
Lsp1109I	GCAGC	4 cut(s)	562, 750, 772, 956
LweI	GCATC	5 cut(s)	133, 681, 1414, 1532, 1586
MaeI	CTAG	2 cut(s)	546, 1061
MaeII	ACGT	1 cut(s)	240
MaeIII	GTNAC	6 cut(s)	39, 316, 841, 1003, 1382, 1546
MalI	GATC	3 cut(s)	662, 672, 1269
MboI	GATC	3 cut(s)	660, 670, 1267
MflI	RGATCY	1 cut(s)	1267
MhlI	GDGCHC	1 cut(s)	1605
MlsI	TGGCCA	1 cut(s)	1293
MluNI	TGGCCA	1 cut(s)	1293
MlyI	GAGTC	3 cut(s)	158, 622, 1522
Mox20I	TGGCCA	1 cut(s)	1293
MroXI	GAANNNNTTC	1 cut(s)	1042
MscI	TGGCCA	1 cut(s)	1293
MseI	TTAA	8 cut(s)	212, 228, 558, 900, 965, 1209, 1317, 1329
Msp20I	TGGCCA	1 cut(s)	1293
MspA1I	CMGCKG	3 cut(s)	763, 1088, 1358
MvnI	CGCG	2 cut(s)	758, 1403
MwoI	GCNNNNNNNGC	2 cut(s)	308, 358
NcoI	CCATGG	1 cut(s)	84
NdeI	CATATG	1 cut(s)	1453
NdeII	GATC	3 cut(s)	660, 670, 1267
NlaIII	CATG	7 cut(s)	88, 209, 509, 635, 671, 701, 731
NlaIV	GGNNCC	3 cut(s)	310, 1185, 1443
NmeAIII	GCCGAG	1 cut(s)	172
NmuCI	GTSAC	4 cut(s)	39, 841, 1382, 1546
PagI	TCATGA	1 cut(s)	505
PceI	AGGCCT	2 cut(s)	606, 1371
PdmI	GAANNNNTTC	1 cut(s)	1042
PfeI	GAWTC	6 cut(s)	371, 430, 479, 622, 798, 1112
PkrI	GCNGC	4 cut(s)	577, 762, 765, 946
PleI	GAGTC	3 cut(s)	157, 622, 1521
PpsI	GAGTC	3 cut(s)	157, 622, 1521
PpuMI	RGGWCCY	2 cut(s)	1067, 1441
PsiI	TTATAA	1 cut(s)	392
Psp124BI	GAGCTC	1 cut(s)	1605
Psp5II	RGGWCCY	2 cut(s)	1067, 1441
PspEI	GGTNACC	1 cut(s)	841
PspFI	CCCAGC	2 cut(s)	174, 1227
PspN4I	GGNNCC	3 cut(s)	310, 1185, 1443
PspPI	GGNCC	6 cut(s)	452, 527, 1067, 1184, 1441, 1620
PspPPI	RGGWCCY	2 cut(s)	1067, 1441
PsuI	RGATCY	1 cut(s)	1267
PvuII	CAGCTG	3 cut(s)	763, 1088, 1358
RsaI	GTAC	6 cut(s)	587, 598, 836, 908, 1257, 1617
RsaNI	GTAC	6 cut(s)	586, 597, 835, 907, 1256, 1616
SacI	GAGCTC	1 cut(s)	1605
SaqAI	TTAA	8 cut(s)	212, 228, 558, 900, 965, 1209, 1317, 1329
SatI	GCNGC	4 cut(s)	576, 761, 764, 945
Sau3AI	GATC	3 cut(s)	660, 670, 1267
Sau96I	GGNCC	6 cut(s)	452, 527, 1067, 1184, 1441, 1620
SchI	GAGTC	3 cut(s)	158, 622, 1522
SduI	GDGCHC	1 cut(s)	1605
SfaNI	GCATC	5 cut(s)	133, 681, 1414, 1532, 1586
SinI	GGWCC	5 cut(s)	452, 1067, 1184, 1441, 1620
SmlI	CTYRAG	3 cut(s)	179, 487, 993
SmoI	CTYRAG	3 cut(s)	179, 487, 993
SpeI	ACTAGT	1 cut(s)	1060
SseBI	AGGCCT	2 cut(s)	606, 1371
SsiI	CCGC	2 cut(s)	1151, 1403
SspI	AATATT	1 cut(s)	1395
SspMI	CTAG	2 cut(s)	546, 1061
SstI	GAGCTC	1 cut(s)	1605
StuI	AGGCCT	2 cut(s)	606, 1371
StyI	CCWWGG	2 cut(s)	84, 289
TaaI	ACNGT	8 cut(s)	343, 397, 826, 893, 911, 1475, 1564, 1620
TaiI	ACGT	1 cut(s)	243
TaqI	TCGA	3 cut(s)	788, 1072, 1608
TaqII	GACCGA	5 cut(s)	87, 469, 1201, 1326, 1499
TatI	WGTACW	3 cut(s)	585, 834, 906
TfiI	GAWTC	6 cut(s)	371, 430, 479, 622, 798, 1112
Tru1I	TTAA	8 cut(s)	212, 228, 558, 900, 965, 1209, 1317, 1329
Tru9I	TTAA	8 cut(s)	212, 228, 558, 900, 965, 1209, 1317, 1329
TscAI	CASTG	6 cut(s)	447, 898, 1132, 1143, 1485, 1567
TseFI	GTSAC	4 cut(s)	39, 841, 1382, 1546
TseI	GCWGC	4 cut(s)	575, 760, 763, 944
Tsp45I	GTSAC	4 cut(s)	39, 841, 1382, 1546
TspDTI	ATGAA	6 cut(s)	453, 494, 631, 906, 1299, 1543
TspRI	CASTG	6 cut(s)	447, 898, 1132, 1143, 1485, 1567
VpaK11BI	GGWCC	5 cut(s)	452, 1067, 1184, 1441, 1620
XapI	RAATTY	2 cut(s)	637, 1054
XcmI	CCANNNNNNNNNTGG	2 cut(s)	382, 802
XmnI	GAANNNNTTC	1 cut(s)	1042
XspI	CTAG	2 cut(s)	546, 1061

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.