MD08G1105000.v1.1

Lipolytic acyl hydrolase (LAH)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
8923020 .. 8923400
381 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1105000.v1.1.491

Sequence Viewer

Length: 249 bp
ATGTTGCAGATGTTTGATGGTGAGGATGCAAGAATCACTGGCTATTTCGATGTGATTGCAGGAACAAGCACTCGTGGTCTAGTGCCTGCTATGCTTGAAACCCTAGATGAGAACAACCGCCCGATGTTTGCTGCCAAGGATATTAAGGACTTCTACCTCACTCACTGCCCTAAAATCTTCCCCCAGAAATATTGTCCATTGGTTCCGAAAATGAATAAGATTATCAAAGCCCTATTAGGGCCAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

83

Amino Acids

9.28

Weight (kDa)

8.62

Isoelectric Point (pI)

37.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 118
AfiI CCNNNNNNNGG 1 cut(s) 237
AgsI TTSAA 1 cut(s) 98
AoxI GGCC 1 cut(s) 239
ApeKI GCWGC 1 cut(s) 131
AspS9I GGNCC 1 cut(s) 239
AsuHPI GGTGA 1 cut(s) 32
BauI CACGAG 1 cut(s) 72
BbvI GCAGC 1 cut(s) 118
BccI CCATC 1 cut(s) 11
BcgI CGANNNNNNTGC 2 cut(s) 38, 72
BfaI CTAG 2 cut(s) 80, 104
BisI GCNGC 1 cut(s) 132
BlsI GCNGC 1 cut(s) 133
BmgT120I GGNCC 1 cut(s) 239
BmiI GGNNCC 1 cut(s) 204
BmsI GCATC 1 cut(s) 16
BsaJI CCNNGG 1 cut(s) 135
Bsc4I CCNNNNNNNGG 1 cut(s) 237
Bse1I ACTGG 1 cut(s) 43
BseDI CCNNGG 1 cut(s) 135
BseGI GGATG 1 cut(s) 31
BseLI CCNNNNNNNGG 1 cut(s) 237
BseNI ACTGG 1 cut(s) 43
BseXI GCAGC 1 cut(s) 118
BshFI GGCC 1 cut(s) 241
BslI CCNNNNNNNGG 1 cut(s) 237
BsnI GGCC 1 cut(s) 241
BspACI CCGC 1 cut(s) 118
BspANI GGCC 1 cut(s) 241
BspLI GGNNCC 1 cut(s) 204
BsrI ACTGG 1 cut(s) 43
BssECI CCNNGG 1 cut(s) 135
BssSI CACGAG 1 cut(s) 72
BssT1I CCWWGG 1 cut(s) 135
Bst2BI CACGAG 1 cut(s) 72
BstC8I GCNNGC 1 cut(s) 87
BstF5I GGATG 1 cut(s) 31
BstMWI GCNNNNNNNGC 1 cut(s) 91
BstV1I GCAGC 1 cut(s) 118
BsuRI GGCC 1 cut(s) 241
BtsCI GGATG 1 cut(s) 31
BtsI GCAGTG 1 cut(s) 163
BtsIMutI CAGTG 2 cut(s) 36, 163
Cac8I GCNNGC 1 cut(s) 87
Cfr13I GGNCC 1 cut(s) 239
CviJI RGCY 3 cut(s) 42, 230, 241
CviKI_1 RGCY 3 cut(s) 42, 230, 241
Eco130I CCWWGG 1 cut(s) 135
EcoT14I CCWWGG 1 cut(s) 135
ErhI CCWWGG 1 cut(s) 135
FaiI YATR 1 cut(s) 92
Fnu4HI GCNGC 1 cut(s) 132
FokI GGATG 1 cut(s) 38
Fsp4HI GCNGC 1 cut(s) 132
FspBI CTAG 2 cut(s) 80, 104
GluI GCNGC 1 cut(s) 132
HaeIII GGCC 1 cut(s) 241
HinfI GANTC 1 cut(s) 33
HphI GGTGA 1 cut(s) 32
Hpy188I TCNGA 1 cut(s) 207
HpyCH4V TGCA 3 cut(s) 7, 29, 59
HpyF10VI GCNNNNNNNGC 1 cut(s) 91
LpnPI CCDG 4 cut(s) 24, 45, 99, 197
Lsp1109I GCAGC 1 cut(s) 118
LweI GCATC 1 cut(s) 16
MaeI CTAG 2 cut(s) 80, 104
MboII GAAGA 1 cut(s) 169
MnlI CCTC 2 cut(s) 16, 167
MseI TTAA 1 cut(s) 144
MwoI GCNNNNNNNGC 1 cut(s) 91
NlaIV GGNNCC 1 cut(s) 204
PfeI GAWTC 1 cut(s) 33
PkrI GCNGC 1 cut(s) 133
PspN4I GGNNCC 1 cut(s) 204
PspPI GGNCC 1 cut(s) 239
SaqAI TTAA 1 cut(s) 144
SatI GCNGC 1 cut(s) 132
Sau96I GGNCC 1 cut(s) 239
SetI ASST 1 cut(s) 159
SfaNI GCATC 1 cut(s) 16
SsiI CCGC 1 cut(s) 118
SspI AATATT 1 cut(s) 191
SspMI CTAG 2 cut(s) 80, 104
StyI CCWWGG 1 cut(s) 135
TaqI TCGA 1 cut(s) 48
TfiI GAWTC 1 cut(s) 33
Tru1I TTAA 1 cut(s) 144
Tru9I TTAA 1 cut(s) 144
TscAI CASTG 2 cut(s) 43, 170
TseI GCWGC 1 cut(s) 131
TspDTI ATGAA 1 cut(s) 227
TspRI CASTG 2 cut(s) 43, 170
XspI CTAG 2 cut(s) 80, 104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.