pycom12g22530

Lipolytic acyl hydrolase (LAH)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
23393256 .. 23394566
1311 bp
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UTR
Exon/CDS
Intron
pycom12g22530.2

Sequence Viewer

Length: 366 bp
ATGGGGAGTAGCTCAACCTCTTATAAACTCTTGCAAGGGTGGGGAGCTGCTGATGGTCGAAAGTTTACCACTATCCTTAGCATTGATGGAGGAGTAAGAGGCATCATTCCGGCAACCATGCTCGCCTTTCTCGAGTCCGAACTCCAGGTTAGCAAACTGGATGGAAAAGATGCAAGGATTGCACACTACTTTGACTACATTGCTGGAACCAGCACAGGAGGCCTTGTTACCGCTATGATTACCACACCAAATGATAAAAAGCAACCTCTTTTTGAAGCACATGAACTCAAGAAGTTTTATTTTGATGAGAATCCATACATATTCCCTCACGAACCGACCCAAACCGCTCGAATGTATGTTCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

122

Amino Acids

13.38

Weight (kDa)

6.27

Isoelectric Point (pI)

34.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 24
AccBSI CCGCTC 1 cut(s) 347
AciI CCGC 2 cut(s) 231, 345
AgsI TTSAA 1 cut(s) 275
AjnI CCWGG 1 cut(s) 144
AluBI AGCT 2 cut(s) 12, 47
AluI AGCT 2 cut(s) 12, 47
Ama87I CYCGRG 1 cut(s) 131
AoxI GGCC 1 cut(s) 220
ApeKI GCWGC 1 cut(s) 47
AvaI CYCGRG 1 cut(s) 131
BbvI GCAGC 1 cut(s) 34
BccI CCATC 3 cut(s) 47, 80, 155
BciT130I CCWGG 1 cut(s) 146
BisI GCNGC 1 cut(s) 48
BlsI GCNGC 1 cut(s) 49
Bme1390I CCNGG 1 cut(s) 146
BmeT110I CYCGRG 1 cut(s) 131
BmiI GGNNCC 1 cut(s) 208
BmrFI CCNGG 1 cut(s) 146
BmsI GCATC 2 cut(s) 111, 160
BpmI CTGGAG 1 cut(s) 128
Bpu10I CCTNAGC 1 cut(s) 77
BpuEI CTTGAG 1 cut(s) 272
BsaBI GATNNNNATC 1 cut(s) 309
BsaXI ACNNNNNCTCC 2 cut(s) 210, 240
Bse1I ACTGG 1 cut(s) 162
Bse3DI GCAATG 1 cut(s) 198
Bse8I GATNNNNATC 1 cut(s) 309
BseBI CCWGG 1 cut(s) 146
BseGI GGATG 1 cut(s) 166
BseJI GATNNNNATC 1 cut(s) 309
BseMI GCAATG 1 cut(s) 198
BseNI ACTGG 1 cut(s) 162
BseRI GAGGAG 1 cut(s) 105
BseXI GCAGC 1 cut(s) 34
BshFI GGCC 1 cut(s) 222
BsiHKCI CYCGRG 1 cut(s) 131
BsiSI CCGG 1 cut(s) 110
BsnI GGCC 1 cut(s) 222
BsoBI CYCGRG 1 cut(s) 131
BspACI CCGC 2 cut(s) 231, 345
BspANI GGCC 1 cut(s) 222
BspLI GGNNCC 1 cut(s) 208
BsrBI CCGCTC 1 cut(s) 347
BsrDI GCAATG 1 cut(s) 198
BsrI ACTGG 1 cut(s) 162
Bst2UI CCWGG 1 cut(s) 146
BstAPI GCANNNNNTGC 1 cut(s) 179
BstC8I GCNNGC 1 cut(s) 123
BstDEI CTNAG 1 cut(s) 77
BstF5I GGATG 1 cut(s) 166
BstMWI GCNNNNNNNGC 2 cut(s) 179, 219
BstNI CCWGG 1 cut(s) 146
BstSCI CCNGG 1 cut(s) 144
BstV1I GCAGC 1 cut(s) 34
BsuRI GGCC 1 cut(s) 222
BtsCI GGATG 1 cut(s) 166
Cac8I GCNNGC 1 cut(s) 123
CviAII CATG 2 cut(s) 118, 281
CviJI RGCY 3 cut(s) 12, 47, 222
CviKI_1 RGCY 3 cut(s) 12, 47, 222
DdeI CTNAG 1 cut(s) 77
Eco147I AGGCCT 1 cut(s) 222
Eco88I CYCGRG 1 cut(s) 131
EcoRII CCWGG 1 cut(s) 144
FaeI CATG 2 cut(s) 121, 284
FaiI YATR 8 cut(s) 24, 119, 236, 282, 316, 320, 357, 364
FatI CATG 2 cut(s) 117, 280
Fnu4HI GCNGC 1 cut(s) 48
FokI GGATG 1 cut(s) 173
Fsp4HI GCNGC 1 cut(s) 48
GluI GCNGC 1 cut(s) 48
GsuI CTGGAG 1 cut(s) 128
HaeIII GGCC 1 cut(s) 222
HapII CCGG 1 cut(s) 110
Hin1II CATG 2 cut(s) 121, 284
HinfI GANTC 2 cut(s) 134, 310
HpaII CCGG 1 cut(s) 110
Hpy166II GTNNAC 1 cut(s) 66
Hpy188I TCNGA 1 cut(s) 139
Hpy188III TCNNGA 3 cut(s) 131, 289, 329
Hpy8I GTNNAC 1 cut(s) 66
HpyCH4V TGCA 3 cut(s) 34, 173, 182
HpyF10VI GCNNNNNNNGC 2 cut(s) 179, 219
HpyF3I CTNAG 1 cut(s) 77
Hsp92II CATG 2 cut(s) 121, 284
LmnI GCTCC 1 cut(s) 44
LpnPI CCDG 7 cut(s) 123, 131, 143, 158, 189, 201, 223
Lsp1109I GCAGC 1 cut(s) 34
LweI GCATC 2 cut(s) 111, 160
MaeIII GTNAC 1 cut(s) 226
MbiI CCGCTC 1 cut(s) 347
MlyI GAGTC 1 cut(s) 143
MnlI CCTC 6 cut(s) 28, 83, 92, 212, 276, 336
MspI CCGG 1 cut(s) 110
MspR9I CCNGG 1 cut(s) 146
MvaI CCWGG 1 cut(s) 146
MwoI GCNNNNNNNGC 2 cut(s) 179, 219
NlaIII CATG 2 cut(s) 121, 284
NlaIV GGNNCC 1 cut(s) 208
PaeR7I CTCGAG 1 cut(s) 131
PceI AGGCCT 1 cut(s) 222
PcsI WCGNNNNNNNCGW 1 cut(s) 129
PfeI GAWTC 1 cut(s) 310
PkrI GCNGC 1 cut(s) 49
PleI GAGTC 1 cut(s) 142
PpsI GAGTC 1 cut(s) 142
PsiI TTATAA 1 cut(s) 24
Psp6I CCWGG 1 cut(s) 144
PspGI CCWGG 1 cut(s) 144
PspN4I GGNNCC 1 cut(s) 208
SatI GCNGC 1 cut(s) 48
SchI GAGTC 1 cut(s) 143
ScrFI CCNGG 1 cut(s) 146
SetI ASST 5 cut(s) 14, 20, 49, 150, 268
SfaNI GCATC 2 cut(s) 111, 160
Sfr274I CTCGAG 1 cut(s) 131
SlaI CTCGAG 1 cut(s) 131
SmlI CTYRAG 2 cut(s) 131, 287
SmoI CTYRAG 2 cut(s) 131, 287
SseBI AGGCCT 1 cut(s) 222
SsiI CCGC 2 cut(s) 231, 345
StuI AGGCCT 1 cut(s) 222
StyD4I CCNGG 1 cut(s) 144
TaqI TCGA 3 cut(s) 58, 132, 349
TfiI GAWTC 1 cut(s) 310
TseI GCWGC 1 cut(s) 47
TspDTI ATGAA 1 cut(s) 297
XhoI CTCGAG 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.