RLG00000010724

Lipolytic acyl hydrolase (LAH)

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
3934956 .. 3936640
1685 bp
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UTR
Exon/CDS
Intron
RLM00000010724

Sequence Viewer

Length: 351 bp
ATGGAGAGAAAGCAGAAGCTGGATGGTGAAGAAGCAAAGCTCGCTGACTATTTTGATGTGATTGCAGGTACAAGCACAGGTGGTCTTGTGGCTGCCATGATCACAGCTCCAAATGAGAATGGCCGTCCATTGTTTGCTGCCAAAGATATCAAGGACTTCTACCTCACTCATTCGCCTAAAATCTTCCCACAAAAGAGTTGGTCATTGTTGCCACATGTTACAAAGATTATCAAAGCTCTAGCAGGACCAAAATATGATGGAAAGTACCTACAAGCTCTGGTTAAGCAAAAACTTGACAATAAGAGACTCCACCAAACGTTGACTGATGTTGTAATTCCTGCATTTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

117

Amino Acids

12.9

Weight (kDa)

9.35

Isoelectric Point (pI)

33.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Patatin PF01734 13 - 113 2.5e-09 Patatin-like phospholipase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 56
AclI AACGTT 1 cut(s) 317
AcoI YGGCCR 1 cut(s) 121
AfaI GTAC 2 cut(s) 70, 266
AflIII ACRYGT 1 cut(s) 214
AluBI AGCT 5 cut(s) 19, 40, 107, 236, 275
AluI AGCT 5 cut(s) 19, 40, 107, 236, 275
Alw26I GTCTC 1 cut(s) 298
AlwNI CAGNNNCTG 1 cut(s) 19
AoxI GGCC 1 cut(s) 121
ApeKI GCWGC 2 cut(s) 92, 137
AspS9I GGNCC 1 cut(s) 245
AsuHPI GGTGA 1 cut(s) 38
AvaII GGWCC 1 cut(s) 245
BbvI GCAGC 2 cut(s) 79, 124
BccI CCATC 2 cut(s) 17, 251
BceAI ACGGC 1 cut(s) 108
BclI TGATCA 1 cut(s) 99
BcoDI GTCTC 1 cut(s) 298
BfaI CTAG 1 cut(s) 239
BfuAI ACCTGC 1 cut(s) 56
BisI GCNGC 2 cut(s) 93, 138
BlsI GCNGC 2 cut(s) 94, 139
Bme18I GGWCC 1 cut(s) 245
BmgT120I GGNCC 1 cut(s) 245
BseGI GGATG 1 cut(s) 28
BseXI GCAGC 2 cut(s) 79, 124
BshFI GGCC 1 cut(s) 123
BsmAI GTCTC 1 cut(s) 298
BsnI GGCC 1 cut(s) 123
Bsp143I GATC 1 cut(s) 99
BspANI GGCC 1 cut(s) 123
BspMI ACCTGC 1 cut(s) 56
BssMI GATC 1 cut(s) 99
BstC8I GCNNGC 1 cut(s) 42
BstF5I GGATG 1 cut(s) 28
BstKTI GATC 1 cut(s) 102
BstMAI GTCTC 1 cut(s) 298
BstMBI GATC 1 cut(s) 99
BstMWI GCNNNNNNNGC 1 cut(s) 41
BstNSI RCATGY 1 cut(s) 218
BstV1I GCAGC 2 cut(s) 79, 124
BsuRI GGCC 1 cut(s) 123
BtsCI GGATG 1 cut(s) 28
BveI ACCTGC 1 cut(s) 56
Cac8I GCNNGC 1 cut(s) 42
CaiI CAGNNNCTG 1 cut(s) 19
Cfr13I GGNCC 1 cut(s) 245
Csp6I GTAC 2 cut(s) 69, 265
CviAII CATG 2 cut(s) 97, 215
CviJI RGCY 7 cut(s) 19, 40, 92, 107, 123, 236, 275
CviKI_1 RGCY 7 cut(s) 19, 40, 92, 107, 123, 236, 275
CviQI GTAC 2 cut(s) 69, 265
DpnI GATC 1 cut(s) 101
DpnII GATC 1 cut(s) 99
EaeI YGGCCR 1 cut(s) 121
Eco32I GATATC 1 cut(s) 148
Eco47I GGWCC 1 cut(s) 245
EcoRV GATATC 1 cut(s) 148
FaeI CATG 2 cut(s) 100, 218
FaiI YATR 3 cut(s) 98, 216, 255
FatI CATG 2 cut(s) 96, 214
FbaI TGATCA 1 cut(s) 99
Fnu4HI GCNGC 2 cut(s) 93, 138
FokI GGATG 1 cut(s) 35
Fsp4HI GCNGC 2 cut(s) 93, 138
FspBI CTAG 1 cut(s) 239
GluI GCNGC 2 cut(s) 93, 138
HaeIII GGCC 1 cut(s) 123
Hin1II CATG 2 cut(s) 100, 218
HincII GTYRAC 1 cut(s) 321
HindII GTYRAC 1 cut(s) 321
HinfI GANTC 1 cut(s) 306
HphI GGTGA 1 cut(s) 38
Hpy166II GTNNAC 1 cut(s) 321
Hpy8I GTNNAC 1 cut(s) 321
HpyCH4IV ACGT 1 cut(s) 317
HpyCH4V TGCA 2 cut(s) 65, 341
HpyF10VI GCNNNNNNNGC 1 cut(s) 41
HpySE526I ACGT 1 cut(s) 317
Hsp92II CATG 2 cut(s) 100, 218
Ksp22I TGATCA 1 cut(s) 99
Kzo9I GATC 1 cut(s) 99
LmnI GCTCC 1 cut(s) 112
LpnPI CCDG 5 cut(s) 5, 51, 63, 228, 263
Lsp1109I GCAGC 2 cut(s) 79, 124
MaeI CTAG 1 cut(s) 239
MaeII ACGT 1 cut(s) 317
MaeIII GTNAC 1 cut(s) 217
MalI GATC 1 cut(s) 101
MboI GATC 1 cut(s) 99
MboII GAAGA 2 cut(s) 41, 175
MluCI AATT 1 cut(s) 333
MlyI GAGTC 1 cut(s) 300
MnlI CCTC 1 cut(s) 173
MseI TTAA 1 cut(s) 282
MwoI GCNNNNNNNGC 1 cut(s) 41
NdeII GATC 1 cut(s) 99
NlaIII CATG 2 cut(s) 100, 218
NspI RCATGY 1 cut(s) 218
PciI ACATGT 1 cut(s) 214
PkrI GCNGC 2 cut(s) 94, 139
PleI GAGTC 1 cut(s) 300
PpsI GAGTC 1 cut(s) 300
PscI ACATGT 1 cut(s) 214
Psp1406I AACGTT 1 cut(s) 317
PspPI GGNCC 1 cut(s) 245
PstNI CAGNNNCTG 1 cut(s) 19
RsaI GTAC 2 cut(s) 70, 266
RsaNI GTAC 2 cut(s) 69, 265
SaqAI TTAA 1 cut(s) 282
SatI GCNGC 2 cut(s) 93, 138
Sau3AI GATC 1 cut(s) 99
Sau96I GGNCC 1 cut(s) 245
SchI GAGTC 1 cut(s) 300
SinI GGWCC 1 cut(s) 245
Sse9I AATT 1 cut(s) 333
SspMI CTAG 1 cut(s) 239
TaiI ACGT 1 cut(s) 320
TasI AATT 1 cut(s) 333
Tru1I TTAA 1 cut(s) 282
Tru9I TTAA 1 cut(s) 282
TseI GCWGC 2 cut(s) 92, 137
VpaK11BI GGWCC 1 cut(s) 245
XceI RCATGY 1 cut(s) 218
XcmI CCANNNNNNNNNTGG 1 cut(s) 195
XspI CTAG 1 cut(s) 239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.