Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000299

Physical Location & Seq

Genomic Coordinates Reverse (-)

2249515 .. 2251914

Gene Structure 2400 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1025600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2400 bp

ATGGCTTTTGCTCTGCTATATCTTCTTTGCTTCTTCCTTTCCATGATTCTCCCATGTTCCATCCTAGCTCAATCTTCTGGAAACATTTCTTTAGCCTCATCTCTCACTGCACTAAATGATGATAACTCGTCATCATGGACATCACCTTCTGGTGACTTTGCCTTCGGTTTTCGAAGAATTGGAAAATATGGGTTCCTACTAGCCATCTGGTTCAATAAGATACCAGAGAAAACTGTTGTCTGGTCAGCCAATGGGGACAATCTTGTGCAGCAAGGATCCCAATGTGTACTTACAAGTGAAGGCCAGCTTATGCTCAATGACGCAACGGGCCAGCAAATATGGTATGCTAATTCTGCTAACGCAGAAGTGTTTTATGCAGCCATACTTGACAGTGGAAATTTTGTTCTGGCCAACCGAATGTCAATTAATTTGTGGGAGAGTTTTGATGAACCAACTGATACAATCCTACCCACACAGACTCTAAGTCAAAACAGCATGCTCTTTGCTCGCTACACGGCAACAAATTACTCACGGGGAAGATTCATGTTTACGCTTCAATCTGACGGAAATCTCTTGCTTTACACAACGAGATTCCCACTGGAGACAAAGAATTATGCTTACAGTGCAACCATGACTATGTATACCGGCTTTCAGGTCATCTTCAATCAGTCCGGCTCTATTTACCTTACTGCACAGAATGGAAGCATACTGAAAATGATATCATCCAACACAGTTTCGATGCAAAATTTCTACCAGAAAGCAACTGTGGAGCATGATGGAGTTTTGAGGCACTCTGTTCACCCCAAAACCGCTGCATCAAGTGCTGGAAAACCCATGGCTTGGTCCCCTTTGATCTCCGAACCTTCGAATATTTGCTCAAGAATTGTAGGAGCCATAGGTAGTGGTGCATGTGGATACAACAGCTTATGCAGTTATGATGATAAAGGACCAACCTGCCAATGTCCTTATGGCTACACATTTATTGATCCCAATGATGTCTTGAAAGGATGCAAGCAAAACTTTGTTTCACAAAGTTGTGATGAGGCCTTGCCGGAGACAGAGGATTTTTATTTTCACGAGATGCAAAACGCAGAGTGGTTTGACGGTGATTATGAGCAGTTTACATCGGTACCTGAGGATTGGTGCAGACAGAATTGCTTAGCTGATTGTTTTTGTGTCGTTGCCATTTTCAAGGAAGGAGAGTGTGTGAAGAAAAGAATTCCTCTTTCGAATGGGAGGATGGACACAAGTATTGGTGGAACAGCTCTCATCAAAGTAAGGAAAGGCAACTTTACTTTGAAACCTGAAGGTCCAAATACGAAAAAGAAAGATTACTCAACCTTGATCCTCATCGGATCAGTGCTCCTGAGTAGCTCGGGATTTCTGAACTTGATTTTGCTATTAACAACCTATTTGGTTGTTTCTCATATTTCTTACAGAAAAGCAAGGGTGATTCAACCTCACTCAGTCATGCCAGGTATGAATATGAAATGTTTCACTTATGAGGAGCTAAACGAAGCTACTAATGGATTCAAGGAAGAACTAGGTCAGGGTTCTTTTGCTACAGTTTTTAAAGGAGTTTTAGGATTTGATAATGGGAAATCTGTTGCTGTCAAAAGATTGGACACTATGGTTGGAGAAAATGAGCCGGAATTCAAAGCTGAAGTGAGCGCAATTGGTAGAACAAACCACAGAAATTTAGTCCAACTGCTTGGGTTCTGCAATGAAGGGGAGCACCGAATTCTTGTCTACGAGTTTATGAGTAATGGTTCACTAGCAAGCTTCCTCTTTGGAGAGTCAAGGCTGAAATGGTACCAGCGACAGAAAATTGCCTTGGGTACTGCAAGAGGGCTGTTGTATTTGCATGAGGAGTGTAACAGCCAAATCATACATTGTGACATTAAGCCTCAAAACATTCTTCTAGACGATTCTTTCACTGCAAAAATTTCTGACTTTGGATTGGCCAAGCTTTTGGGAACGGACCAAACTCGAACTACTACTCGAATCAGGGGAACCAAAGGTTATGTAGCCCCTGAATGGTTCAAAAACATGCCTATCACAATGAAGGTGGATGTTTACAGCTATGGCATTTTGTTACTAGAAATTATTTGTTGCAGGAAGAATTTTGAAGAGCATGCGGATGATGTAGATCAGCTGATACTAGCTTATTGGGCATATGATTGCTATATGCAAAAGGAGCTGCATTTGTTATTGGAGAAGGACGATGAAGCGATGGAAGACGTCAAGATGATGGAGAATTACGTGATGATTGCAATGTGGTGCATTCAGGAGGACCCATCACTGAGACCGACGATGAAGAAAGTCATGCAGATGCTTGAAGGAACTGTTGAAGTCTCAGTTCCACCGGATCCATCGTCATTTATGAGTGAAATAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin Pkinase

Protein Analysis

800

Amino Acids

89.54

Weight (kDa)

5.33

Isoelectric Point (pI)

33.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	78 - 165	1.1e-17	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	511 - 779	4e-47	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	512 - 777	1.8e-51	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000299)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g43401 FvH4_3g43402 FvH4_3g43403 FvH4_3g43440 FvH4_3g43710 FvH4_3g43772
malus_domestica	MD03G1021800.v1.1 MD03G1022000.v1.1 MD11G1024500.v1.1 MD11G1024700.v1.1 MD11G1025200.v1.1 MD11G1025500.v1.1 MD11G1025600.v1.1 MD11G1026200.v1.1 MD11G1026400.v1.1 MD11G1026500.v1.1 MD11G1026600.v1.1 MD11G1026800.v1.1 MD11G1027300.v1.1
prunus_persica	Prupe.6G020400_v2.0.a1 Prupe.6G020500_v2.0.a1 Prupe.6G020600_v2.0.a1 Prupe.6G020700_v2.0.a1 Prupe.6G020800_v2.0.a1 Prupe.6G020900_v2.0.a1 Prupe.6G021000_v2.0.a1 Prupe.6G021500_v2.0.a1 Prupe.6G021600_v2.0.a1
pyrus_communis	pycom03g01850 pycom03g01870 pycom03g01900 pycom03g01910 pycom11g01950 pycom11g01980 pycom11g01990 pycom11g02030 pycom11g02040
rosa_chinensis	RchiOBHm_Chr5g0077411 RchiOBHm_Chr5g0077421 RchiOBHm_Chr5g0077571 RchiOBHm_Chr5g0077601 RchiOBHm_Chr5g0077621 RchiOBHm_Chr5g0077651 RchiOBHm_Chr5g0077661 RchiOBHm_Chr5g0077671 RchiOBHm_Chr5g0077701 RchiOBHm_Chr5g0077741 RchiOBHm_Chr5g0077791 RchiOBHm_Chr5g0077861 RchiOBHm_Chr5g0078871 RchiOBHm_Chr5g0078901 RchiOBHm_Chr5g0078941 RchiOBHm_Chr5g0079081 RchiOBHm_Chr5g0079091 RchiOBHm_Chr7g0233481
rosa_laevigata	RLG00000036694 RLG00000036704 RLG00000036705 RLG00000036710 RLG00000036713 RLG00000036714 RLG00000036716 RLG00000036793 RLG00000036796 RLG00000036804 RLG00000036806
rosa_multiflora	Rmu_co8130992.1_g000001 Rmu_sc0000029.1_g000037 Rmu_sc0002187.1_g000023 Rmu_sc0004168.1_g000001 Rmu_sc0004168.1_g000004 Rmu_sc0004168.1_g000018 Rmu_sc0004168.1_g000028 Rmu_sc0004168.1_g000033 Rmu_sc0004168.1_g000056 Rmu_sc0004277.1_g000009 Rmu_sc0004277.1_g000016 Rmu_sc0004277.1_g000018 Rmu_sc0004277.1_g000020 Rmu_sc0004277.1_g000084 Rmu_sc0004277.1_g000087 Rmu_sc0012487.1_g000001 Rmu_sc0012487.1_g000002
rosa_roxburghii	Rroxscaffold_1G00003760 Rroxscaffold_1G00003780 Rroxscaffold_1G00004370 Rroxscaffold_1G00004400 Rroxscaffold_1G00004490 Rroxscaffold_1G00004510 Rroxscaffold_3G00227260 Rroxscaffold_5G00366480
rosa_rugosa	Rorug05G0454800 Rorug05G0455700 Rorug05G0455900 Rorug05G0456100 Rorug05G0456300 Rorug05G0456700.1 Rorug05G0461800 Rorug05G0462100 Rorug07G0280900.1 Rorug07G0281000
rosa_samantha	Rh5CG562200 Rh5DG543500 Rh5DG544200 Rh5DG544400 Rh5DG544500 Rh5DG544600 Rh5DG544700 Rh5DG544900 Rh5DG545200 Rh5DG549700 Rh7DG426000
rosa_wichuraiana	Rw0G003130 Rw0G023780 Rw0G023790 Rw5G046780 Rw5G047330 Rw5G047350 Rw5G047370 Rw5G047390 Rw5G047420 Rw7G036050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2244
Acc36I	ACCTGC	1 cut(s)	962
Acc65I	GGTACC	2 cut(s)	1129, 1812
AccB1I	GGYRCC	2 cut(s)	1129, 1812
AccB7I	CCANNNNNTGG	1 cut(s)	840
AccI	GTMKAC	2 cut(s)	641, 1749
AciI	CCGC	2 cut(s)	810, 2138
AclWI	GGATC	7 cut(s)	270, 283, 980, 1339, 1363, 2363, 2376
AcoI	YGGCCR	2 cut(s)	408, 1962
AcsI	RAATTY	8 cut(s)	397, 745, 1218, 1652, 1696, 1740, 1944, 2122
AcuI	CTGAAG	2 cut(s)	1326, 1683
AcyI	GRCGYC	1 cut(s)	2241
AfaI	GTAC	4 cut(s)	288, 1131, 1814, 1840
AfiI	CCNNNNNNNGG	2 cut(s)	840, 2037
AhdI	GACNNNNNGTC	1 cut(s)	483
AjnI	CCWGG	1 cut(s)	1474
AjuI	GAANNNNNNNTTGG	2 cut(s)	1817, 1849
AloI	GAACNNNNNNTCC	2 cut(s)	387, 419
Alw21I	GWGCWC	2 cut(s)	1365, 1737
Alw26I	GTCTC	4 cut(s)	596, 1049, 2299, 2359
AlwI	GGATC	7 cut(s)	270, 283, 980, 1339, 1363, 2363, 2376
Ama87I	CYCGRG	1 cut(s)	1375
AoxI	GGCC	5 cut(s)	301, 328, 408, 1044, 1962
ApeKI	GCWGC	4 cut(s)	268, 377, 812, 2200
ApoI	RAATTY	8 cut(s)	397, 745, 1218, 1652, 1696, 1740, 1944, 2122
ArsI	GACNNNNNNTTYG	2 cut(s)	146, 178
AseI	ATTAAT	1 cut(s)	426
Asp700I	GAANNNNTTC	2 cut(s)	85, 1493
Asp718I	GGTACC	2 cut(s)	1129, 1812
AspLEI	GCGC	1 cut(s)	1673
AspS9I	GGNCC	6 cut(s)	328, 843, 947, 1310, 1981, 2293
AsuHPI	GGTGA	5 cut(s)	135, 164, 791, 1118, 1462
AsuII	TTCGAA	3 cut(s)	172, 866, 1229
AvaI	CYCGRG	1 cut(s)	1375
AvaII	GGWCC	5 cut(s)	843, 947, 1310, 1981, 2293
AxyI	CCTNAGG	1 cut(s)	1134
BaeI	ACNNNNGTAYC	2 cut(s)	1113, 1146
BalI	TGGCCA	2 cut(s)	410, 1964
BamHI	GGATCC	2 cut(s)	275, 2368
BanI	GGYRCC	2 cut(s)	1129, 1812
BauI	CACGAG	1 cut(s)	1076
BbsI	GAAGAC	1 cut(s)	2244
Bbv12I	GWGCWC	2 cut(s)	1365, 1737
BbvI	GCAGC	4 cut(s)	280, 389, 799, 2187
BccI	CCATC	8 cut(s)	68, 212, 770, 1234, 2227, 2245, 2305, 2380
BceAI	ACGGC	1 cut(s)	531
BciT130I	CCWGG	1 cut(s)	1476
BciVI	GTATCC	1 cut(s)	908
BcoDI	GTCTC	4 cut(s)	596, 1049, 2299, 2359
BfaI	CTAG	7 cut(s)	65, 200, 1544, 1775, 1922, 2099, 2162
BfmI	CTRYAG	1 cut(s)	1563
BfuAI	ACCTGC	1 cut(s)	962
BfuI	GTATCC	1 cut(s)	908
BisI	GCNGC	4 cut(s)	269, 378, 813, 2201
BlpI	GCTNAGC	1 cut(s)	1159
BlsI	GCNGC	4 cut(s)	270, 379, 814, 2202
Bme1390I	CCNGG	1 cut(s)	1476
Bme18I	GGWCC	5 cut(s)	843, 947, 1310, 1981, 2293
BmeRI	GACNNNNNGTC	1 cut(s)	483
BmeT110I	CYCGRG	1 cut(s)	1375
BmgT120I	GGNCC	6 cut(s)	328, 843, 947, 1310, 1981, 2293
BmiI	GGNNCC	9 cut(s)	194, 277, 845, 892, 1131, 1814, 2014, 2295, 2370
BmrFI	CCNGG	1 cut(s)	1476
BmsI	GCATC	5 cut(s)	729, 824, 998, 1071, 2322
BpiI	GAAGAC	1 cut(s)	2244
BpmI	CTGGAG	1 cut(s)	620
Bpu1102I	GCTNAGC	1 cut(s)	1159
Bpu14I	TTCGAA	3 cut(s)	172, 866, 1229
BpuEI	CTTGAG	1 cut(s)	862
BsaAI	YACGTR	1 cut(s)	2263
BsaBI	GATNNNNATC	2 cut(s)	1349, 2148
BsaHI	GRCGYC	1 cut(s)	2241
BsaI	GGTCTC	1 cut(s)	2299
BsaJI	CCNNGG	2 cut(s)	834, 1833
BsaWI	WCCGGW	1 cut(s)	2365
BsaXI	ACNNNNNCTCC	2 cut(s)	1191, 1221
Bsc4I	CCNNNNNNNGG	2 cut(s)	840, 2037
Bse118I	RCCGGY	1 cut(s)	644
Bse1I	ACTGG	1 cut(s)	603
Bse21I	CCTNAGG	1 cut(s)	1134
Bse3DI	GCAATG	2 cut(s)	1729, 2280
Bse8I	GATNNNNATC	2 cut(s)	1349, 2148
BseBI	CCWGG	1 cut(s)	1476
BseDI	CCNNGG	2 cut(s)	834, 1833
BseGI	GGATG	6 cut(s)	60, 722, 1013, 1245, 2077, 2146
BseJI	GATNNNNATC	2 cut(s)	1349, 2148
BseLI	CCNNNNNNNGG	2 cut(s)	840, 2037
BseMI	GCAATG	2 cut(s)	1729, 2280
BseMII	CTCAG	5 cut(s)	1125, 1358, 1479, 2294, 2370
BseNI	ACTGG	1 cut(s)	603
BseRI	GAGGAG	2 cut(s)	1520, 1883
BseXI	GCAGC	4 cut(s)	280, 389, 799, 2187
BsgI	GTGCAG	4 cut(s)	93, 287, 675, 1165
BshFI	GGCC	5 cut(s)	303, 330, 410, 1046, 1964
BshNI	GGYRCC	2 cut(s)	1129, 1812
BsiHKAI	GWGCWC	2 cut(s)	1365, 1737
BsiHKCI	CYCGRG	1 cut(s)	1375
BsiSI	CCGG	5 cut(s)	645, 672, 1052, 1649, 2366
BslFI	GGGAC	2 cut(s)	269, 829
BslI	CCNNNNNNNGG	2 cut(s)	840, 2037
BsmAI	GTCTC	4 cut(s)	596, 1049, 2299, 2359
BsmFI	GGGAC	2 cut(s)	269, 829
BsmI	GAATGC	1 cut(s)	2283
BsnI	GGCC	5 cut(s)	303, 330, 410, 1046, 1964
Bso31I	GGTCTC	1 cut(s)	2299
BsoBI	CYCGRG	1 cut(s)	1375
Bsp119I	TTCGAA	3 cut(s)	172, 866, 1229
Bsp1286I	GDGCHC	2 cut(s)	1365, 1737
Bsp143I	GATC	7 cut(s)	275, 852, 985, 1344, 1355, 2149, 2368
Bsp1720I	GCTNAGC	1 cut(s)	1159
Bsp19I	CCATGG	1 cut(s)	834
BspACI	CCGC	2 cut(s)	810, 2138
BspANI	GGCC	5 cut(s)	303, 330, 410, 1046, 1964
BspCNI	CTCAG	5 cut(s)	1126, 1359, 1478, 2295, 2369
BspLI	GGNNCC	9 cut(s)	194, 277, 845, 892, 1131, 1814, 2014, 2295, 2370
BspMI	ACCTGC	1 cut(s)	962
BspPI	GGATC	7 cut(s)	270, 283, 980, 1339, 1363, 2363, 2376
BspQI	GCTCTTC	1 cut(s)	2124
BspT104I	TTCGAA	3 cut(s)	172, 866, 1229
BspT107I	GGYRCC	2 cut(s)	1129, 1812
BspTNI	GGTCTC	1 cut(s)	2299
BsrDI	GCAATG	2 cut(s)	1729, 2280
BsrFI	RCCGGY	1 cut(s)	644
BsrI	ACTGG	1 cut(s)	603
BssAI	RCCGGY	1 cut(s)	644
BssECI	CCNNGG	2 cut(s)	834, 1833
BssMI	GATC	7 cut(s)	275, 852, 985, 1344, 1355, 2149, 2368
BssNAI	GTATAC	1 cut(s)	642
BssNI	GRCGYC	1 cut(s)	2241
BssSI	CACGAG	1 cut(s)	1076
BssT1I	CCWWGG	2 cut(s)	834, 1833
Bst1107I	GTATAC	1 cut(s)	642
Bst2BI	CACGAG	1 cut(s)	1076
Bst2UI	CCWGG	1 cut(s)	1476
Bst4CI	ACNGT	8 cut(s)	235, 392, 623, 733, 766, 1106, 1567, 2347
Bst6I	CTCTTC	1 cut(s)	2124
BstACI	GRCGYC	1 cut(s)	2241
BstAPI	GCANNNNNTGC	1 cut(s)	821
BstBAI	YACGTR	1 cut(s)	2263
BstBI	TTCGAA	3 cut(s)	172, 866, 1229
BstC8I	GCNNGC	7 cut(s)	305, 332, 497, 508, 1013, 1780, 2136
BstDEI	CTNAG	7 cut(s)	482, 1134, 1159, 1367, 1465, 2303, 2356
BstDSI	CCRYGG	1 cut(s)	834
BstF5I	GGATG	6 cut(s)	60, 722, 1013, 1245, 2077, 2146
BstHHI	GCGC	1 cut(s)	1673
BstKTI	GATC	7 cut(s)	278, 855, 988, 1347, 1358, 2152, 2371
BstMAI	GTCTC	4 cut(s)	596, 1049, 2299, 2359
BstMBI	GATC	7 cut(s)	275, 852, 985, 1344, 1355, 2149, 2368
BstMWI	GCNNNNNNNGC	5 cut(s)	353, 623, 821, 2171, 2197
BstNI	CCWGG	1 cut(s)	1476
BstNSI	RCATGY	4 cut(s)	499, 912, 2053, 2138
BstSCI	CCNGG	1 cut(s)	1474
BstSFI	CTRYAG	1 cut(s)	1563
BstV1I	GCAGC	4 cut(s)	280, 389, 799, 2187
BstV2I	GAAGAC	1 cut(s)	2244
BstX2I	RGATCY	2 cut(s)	275, 2368
BstXI	CCANNNNNNTGG	2 cut(s)	1712, 1972
BstYI	RGATCY	2 cut(s)	275, 2368
BstZ17I	GTATAC	1 cut(s)	642
Bsu36I	CCTNAGG	1 cut(s)	1134
BsuI	GTATCC	1 cut(s)	908
BsuRI	GGCC	5 cut(s)	303, 330, 410, 1046, 1964
BtgI	CCRYGG	1 cut(s)	834
BtgZI	GCGATG	1 cut(s)	2246
BtsCI	GGATG	6 cut(s)	60, 722, 1013, 1245, 2077, 2146
BtsI	GCAGTG	2 cut(s)	105, 1935
BtsIMutI	CAGTG	7 cut(s)	105, 397, 596, 628, 1365, 1935, 2300
BveI	ACCTGC	1 cut(s)	962
Cac8I	GCNNGC	7 cut(s)	305, 332, 497, 508, 1013, 1780, 2136
CfoI	GCGC	1 cut(s)	1673
Cfr10I	RCCGGY	1 cut(s)	644
Cfr13I	GGNCC	6 cut(s)	328, 843, 947, 1310, 1981, 2293
CseI	GACGC	1 cut(s)	329
Csp6I	GTAC	4 cut(s)	287, 1130, 1813, 1839
CspCI	CAANNNNNGTGG	2 cut(s)	2049, 2084
CviQI	GTAC	4 cut(s)	287, 1130, 1813, 1839
DdeI	CTNAG	7 cut(s)	482, 1134, 1159, 1367, 1465, 2303, 2356
DpnI	GATC	7 cut(s)	277, 854, 987, 1346, 1357, 2151, 2370
DpnII	GATC	7 cut(s)	275, 852, 985, 1344, 1355, 2149, 2368
DraI	TTTAAA	1 cut(s)	1573
DriI	GACNNNNNGTC	1 cut(s)	483
EaeI	YGGCCR	2 cut(s)	408, 1962
Eam1104I	CTCTTC	1 cut(s)	2124
Eam1105I	GACNNNNNGTC	1 cut(s)	483
EarI	CTCTTC	1 cut(s)	2124
Eco130I	CCWWGG	2 cut(s)	834, 1833
Eco147I	AGGCCT	1 cut(s)	1046
Eco31I	GGTCTC	1 cut(s)	2299
Eco32I	GATATC	1 cut(s)	720
Eco47I	GGWCC	5 cut(s)	843, 947, 1310, 1981, 2293
Eco57I	CTGAAG	2 cut(s)	1326, 1683
Eco81I	CCTNAGG	1 cut(s)	1134
Eco88I	CYCGRG	1 cut(s)	1375
EcoO109I	RGGNCCY	1 cut(s)	2293
EcoRI	GAATTC	3 cut(s)	1218, 1652, 1740
EcoRII	CCWGG	1 cut(s)	1474
EcoRV	GATATC	1 cut(s)	720
EcoT14I	CCWWGG	2 cut(s)	834, 1833
ErhI	CCWWGG	2 cut(s)	834, 1833
FalI	AAGNNNNNCTT	4 cut(s)	291, 323, 1004, 1036
FaqI	GGGAC	2 cut(s)	269, 829
FauNDI	CATATG	1 cut(s)	2176
FblI	GTMKAC	2 cut(s)	641, 1749
Fnu4HI	GCNGC	4 cut(s)	269, 378, 813, 2201
FokI	GGATG	6 cut(s)	47, 709, 1020, 1252, 2084, 2153
Fsp4HI	GCNGC	4 cut(s)	269, 378, 813, 2201
FspBI	CTAG	7 cut(s)	65, 200, 1544, 1775, 1922, 2099, 2162
GlaI	GCGC	1 cut(s)	1672
GluI	GCNGC	4 cut(s)	269, 378, 813, 2201
GsuI	CTGGAG	1 cut(s)	620
HaeIII	GGCC	5 cut(s)	303, 330, 410, 1046, 1964
HapII	CCGG	5 cut(s)	645, 672, 1052, 1649, 2366
HgaI	GACGC	1 cut(s)	329
HhaI	GCGC	1 cut(s)	1673
Hin1I	GRCGYC	1 cut(s)	2241
Hin6I	GCGC	1 cut(s)	1671
HinP1I	GCGC	1 cut(s)	1671
HindIII	AAGCTT	2 cut(s)	1780, 1967
HinfI	GANTC	9 cut(s)	46, 478, 540, 591, 1453, 1530, 1796, 1928, 2004
HpaII	CCGG	5 cut(s)	645, 672, 1052, 1649, 2366
HphI	GGTGA	5 cut(s)	135, 164, 791, 1118, 1462
Hpy166II	GTNNAC	8 cut(s)	287, 549, 642, 799, 1122, 1750, 1772, 2077
Hpy188I	TCNGA	5 cut(s)	562, 859, 1355, 1386, 1951
Hpy188III	TCNNGA	9 cut(s)	78, 879, 1000, 1076, 1366, 1377, 1922, 2245, 2288
Hpy8I	GTNNAC	8 cut(s)	287, 549, 642, 799, 1122, 1750, 1772, 2077
Hpy99I	CGWCG	1 cut(s)	2314
HpyCH4III	ACNGT	8 cut(s)	235, 392, 623, 733, 766, 1106, 1567, 2347
HpyCH4IV	ACGT	2 cut(s)	2241, 2262
HpyF10VI	GCNNNNNNNGC	5 cut(s)	353, 623, 821, 2171, 2197
HpyF3I	CTNAG	7 cut(s)	482, 1134, 1159, 1367, 1465, 2303, 2356
HpySE526I	ACGT	2 cut(s)	2241, 2262
Hsp92I	GRCGYC	1 cut(s)	2241
HspAI	GCGC	1 cut(s)	1671
KpnI	GGTACC	2 cut(s)	1133, 1816
Kzo9I	GATC	7 cut(s)	275, 852, 985, 1344, 1355, 2149, 2368
LguI	GCTCTTC	1 cut(s)	2124
LmnI	GCTCC	6 cut(s)	769, 890, 1368, 1507, 1732, 2197
Lsp1109I	GCAGC	4 cut(s)	280, 389, 799, 2187
LweI	GCATC	5 cut(s)	729, 824, 998, 1071, 2322
MaeI	CTAG	7 cut(s)	65, 200, 1544, 1775, 1922, 2099, 2162
MaeII	ACGT	2 cut(s)	2241, 2262
MaeIII	GTNAC	4 cut(s)	152, 1874, 1895, 2094
MalI	GATC	7 cut(s)	277, 854, 987, 1346, 1357, 2151, 2370
MboI	GATC	7 cut(s)	275, 852, 985, 1344, 1355, 2149, 2368
MfeI	CAATTG	1 cut(s)	1674
MflI	RGATCY	2 cut(s)	275, 2368
MhlI	GDGCHC	2 cut(s)	1365, 1737
MlsI	TGGCCA	2 cut(s)	410, 1964
MluNI	TGGCCA	2 cut(s)	410, 1964
MlyI	GAGTC	2 cut(s)	472, 1805
MmeI	TCCRAC	3 cut(s)	750, 1615, 1729
Mox20I	TGGCCA	2 cut(s)	410, 1964
MroXI	GAANNNNTTC	2 cut(s)	85, 1493
MscI	TGGCCA	2 cut(s)	410, 1964
MseI	TTAA	5 cut(s)	426, 1403, 1572, 1902, 2398
MslI	CAYNNNNRTG	3 cut(s)	635, 2139, 2330
Msp20I	TGGCCA	2 cut(s)	410, 1964
MspA1I	CMGCKG	2 cut(s)	812, 2155
MspI	CCGG	5 cut(s)	645, 672, 1052, 1649, 2366
MspR9I	CCNGG	1 cut(s)	1476
MunI	CAATTG	1 cut(s)	1674
Mva1269I	GAATGC	1 cut(s)	2283
MvaI	CCWGG	1 cut(s)	1476
MwoI	GCNNNNNNNGC	5 cut(s)	353, 623, 821, 2171, 2197
NcoI	CCATGG	1 cut(s)	834
NdeI	CATATG	1 cut(s)	2176
NdeII	GATC	7 cut(s)	275, 852, 985, 1344, 1355, 2149, 2368
NlaIV	GGNNCC	9 cut(s)	194, 277, 845, 892, 1131, 1814, 2014, 2295, 2370
NmuCI	GTSAC	2 cut(s)	152, 1895
NspI	RCATGY	4 cut(s)	499, 912, 2053, 2138
NspV	TTCGAA	3 cut(s)	172, 866, 1229
PaeI	GCATGC	2 cut(s)	499, 2138
PceI	AGGCCT	1 cut(s)	1046
PciSI	GCTCTTC	1 cut(s)	2124
PctI	GAATGC	1 cut(s)	2283
PdmI	GAANNNNTTC	2 cut(s)	85, 1493
PfeI	GAWTC	7 cut(s)	46, 540, 591, 1453, 1530, 1928, 2004
PflMI	CCANNNNNTGG	1 cut(s)	840
PkrI	GCNGC	4 cut(s)	270, 379, 814, 2202
PleI	GAGTC	2 cut(s)	472, 1804
PpsI	GAGTC	2 cut(s)	472, 1804
Ppu21I	YACGTR	1 cut(s)	2263
PpuMI	RGGWCCY	1 cut(s)	2293
PshBI	ATTAAT	1 cut(s)	426
Psp5II	RGGWCCY	1 cut(s)	2293
Psp6I	CCWGG	1 cut(s)	1474
PspGI	CCWGG	1 cut(s)	1474
PspN4I	GGNNCC	9 cut(s)	194, 277, 845, 892, 1131, 1814, 2014, 2295, 2370
PspPI	GGNCC	6 cut(s)	328, 843, 947, 1310, 1981, 2293
PspPPI	RGGWCCY	1 cut(s)	2293
PsuI	RGATCY	2 cut(s)	275, 2368
PvuII	CAGCTG	1 cut(s)	2155
RsaI	GTAC	4 cut(s)	288, 1131, 1814, 1840
RsaNI	GTAC	4 cut(s)	287, 1130, 1813, 1839
RseI	CAYNNNNRTG	3 cut(s)	635, 2139, 2330
SapI	GCTCTTC	1 cut(s)	2124
SaqAI	TTAA	5 cut(s)	426, 1403, 1572, 1902, 2398
SatI	GCNGC	4 cut(s)	269, 378, 813, 2201
Sau3AI	GATC	7 cut(s)	275, 852, 985, 1344, 1355, 2149, 2368
Sau96I	GGNCC	6 cut(s)	328, 843, 947, 1310, 1981, 2293
SchI	GAGTC	2 cut(s)	472, 1805
ScrFI	CCNGG	1 cut(s)	1476
SduI	GDGCHC	2 cut(s)	1365, 1737
SfaNI	GCATC	5 cut(s)	729, 824, 998, 1071, 2322
SfcI	CTRYAG	1 cut(s)	1563
SfuI	TTCGAA	3 cut(s)	172, 866, 1229
SinI	GGWCC	5 cut(s)	843, 947, 1310, 1981, 2293
SmiMI	CAYNNNNRTG	3 cut(s)	635, 2139, 2330
SmlI	CTYRAG	1 cut(s)	877
SmoI	CTYRAG	1 cut(s)	877
SphI	GCATGC	2 cut(s)	499, 2138
SseBI	AGGCCT	1 cut(s)	1046
SsiI	CCGC	2 cut(s)	810, 2138
SspI	AATATT	1 cut(s)	871
SspMI	CTAG	7 cut(s)	65, 200, 1544, 1775, 1922, 2099, 2162
StuI	AGGCCT	1 cut(s)	1046
StyD4I	CCNGG	1 cut(s)	1474
StyI	CCWWGG	2 cut(s)	834, 1833
TaaI	ACNGT	8 cut(s)	235, 392, 623, 733, 766, 1106, 1567, 2347
TaiI	ACGT	2 cut(s)	2244, 2265
TaqI	TCGA	6 cut(s)	172, 737, 866, 1229, 1990, 2002
TaqII	GACCGA	1 cut(s)	2323
TatI	WGTACW	1 cut(s)	286
TfiI	GAWTC	7 cut(s)	46, 540, 591, 1453, 1530, 1928, 2004
Tru1I	TTAA	5 cut(s)	426, 1403, 1572, 1902, 2398
Tru9I	TTAA	5 cut(s)	426, 1403, 1572, 1902, 2398
TscAI	CASTG	7 cut(s)	112, 397, 603, 628, 1365, 1942, 2307
TseFI	GTSAC	2 cut(s)	152, 1895
TseI	GCWGC	4 cut(s)	268, 377, 812, 2200
Tsp45I	GTSAC	2 cut(s)	152, 1895
TspDTI	ATGAA	8 cut(s)	462, 532, 1496, 1502, 1740, 2078, 2241, 2330
TspGWI	ACGGA	2 cut(s)	579, 1994
TspRI	CASTG	7 cut(s)	112, 397, 603, 628, 1365, 1942, 2307
Van91I	CCANNNNNTGG	1 cut(s)	840
VpaK11BI	GGWCC	5 cut(s)	843, 947, 1310, 1981, 2293
VspI	ATTAAT	1 cut(s)	426
XapI	RAATTY	8 cut(s)	397, 745, 1218, 1652, 1696, 1740, 1944, 2122
XbaI	TCTAGA	1 cut(s)	1921
XceI	RCATGY	4 cut(s)	499, 912, 2053, 2138
XcmI	CCANNNNNNNNNTGG	1 cut(s)	965
XmiI	GTMKAC	2 cut(s)	641, 1749
XmnI	GAANNNNTTC	2 cut(s)	85, 1493
XspI	CTAG	7 cut(s)	65, 200, 1544, 1775, 1922, 2099, 2162
ZraI	GACGTC	1 cut(s)	2242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.