MD11G1026500.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
2355834 .. 2358236
2403 bp
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UTR
Exon/CDS
Intron
MD11G1026500.v1.1.491

Sequence Viewer

Length: 2403 bp
ATGGATTTTGAACTACCATATAGTGTTTTCTTTCTACTTCTCCTTCTAGTGATACTACCAATTTCCACTCCAGCTCAAACTTACAACAATATATCCTTGGGCTCATCCCTCACTGCACTAGATGATAACTCATCATCCTGGCGATCACCATCTGGTGAATTTGCTTTCGGTTTTCGGCAACTGGGAGTAGATGGGTTCCTACTAGCTATCTGGTTCAATAAAATACCAGAAAGAACGATAGTCTGGTCAGCCAATGGGGGTAGTCTTGTGCCACAAGGATCTCAGGTTGAACTTACAAATGATGGCCAATTTATGCTCAAGGATAAAACTGGAAAGCAAATATCTTTTGCTGGATCTTTGGGTATTACTGGAGTTGCCTATGCAGCCATGCTAGACACCGGCAATTTTGTGTTGGCCAACAAAAGTTCAAAATATTTGTGGGAGAGTTTTGAGGAACCAACTAATACACTTCTACCAACGCAGACTTTAAATCGGAACAGCAAACTCTATGCTAGCTACACGGCATCAAATTACACGCCAGGGAGATTCCAGTTTGCGCTAAAATCTGATGGAGAACTGTTGCTTTATACAACAAATTACCCATTGGATTCCCGTAATCATGATTATTGGTCAACACACACTGAGGGCAGCGGTTTTCAGGTCATCTTCAGCCAGTCTGGCTCTATTTACCTTACGGGCACAAATGGTAGCATACTTAATATGCTATCGGACAATACTTCTTCAACGCAAGATTTCTACCACCGAGCAATGCTCGAGTACAATGGAGTTTTCAGGCACTATGTCTACCCTAAAAAAACTGGCTCGGGTAGTGTGGGAACGAGGCGCCAGGGTTGGTCTTCTTCCTCCTTCATACCTTCAAATTTATGTACCTCAATCTTAGAAAGCACAGGTGGCGGTGCATGTGGGTTCAATAGCTTATGTAGAGATGATACTGAAGGACCGGTTTGTGAGTGCCCAGATGGATACAGCTTTATTGATAAAAATGATGTGCTGAAAGGATGCAAGCAGAACTTCGTTTCTCAGAGTTGTGATCAAGCCTTTCCAGAAACACATCTTTTCGACTTTCAAGAACATGAAAACAGAGACTGGCCTCTTTCGGATTATCAGCATTTTCAGCCAGTAAGTGAGGATTGGTGCAAGCAGAGTTGCCTAAGTGACTGCTTCTGTGCCGTTGTCATTTTCAAAAATGATGACTGTTGGAAGAAGGGAAGTCCTCTTATGAACGGAAGGATTGATCCCACTGTTGGTAAAAAAGCTCTAATCAAAATAAGGATCGATTCTAACAATTCAAGAAAGCATTCCAATTCAATTCCCAACCTCGCTCGGCTAGGTCTCCTCGGTAGCTCCGCATTTCTGAACTTGCTCCTGCTAATCATAACCTGTTTACTTTTTTTCCACATTATCCATCACAGAAAAGCAAAGTTGAGTATGCTTTACCCGGGTGTTCAAGGCAATAATCTGAAAAGTTTCACGTACATGGAGCTGAAAGGAGCTACCAACGGATTCAAGCAAGAACTAGGACGTGGGGCTTTTGCAACGGTTTTCAAAGGAGTTTTAGCATCCGAAGATGGGAAGCATGTTGCTGTCAAAAGATTGGACACTATGGTCAGAGAGAACGATTTGGAATTCAAAGCTGAAGTGAGCGCAATTGGCAGAACAAATCACAAGAACTTAGTCCAGCTACTAGGATTTTGCAACGAAGGGCAGCGCAGAATTCTTGTATATGAATTTATGAGCAACGGCTCTCTAGCAAGCTTTCTCTTTGGAGAGTCAAGGCCAAGCTGGTATCAAAGAAGAGAAATTGCCTTGGGAACTGCAAGAGGGATCTTGTATTTGCATGAGGAGTGTAGTATCCAAATCCTACATTGTGACATCAAGCCTCAAAACATTCTTCTAGACGACTCTTTCAACGCAAGAATTGCTGACTTTGGAGTGGCGAAGCTTTTGAAAATAGAGCAGACTCGAACAACGACTAGATTCAGGGGGACAAGAGGTTATGTGGCCCCTGAATGGTTCAAAAGCTTGCCTGTCACAGTAAAGGCAGATGTTTACAGCTTCGGCATTTTGCTATTAGAGATTGTTTGCTGCAGGAAGAATTATGAAGCGAAGATGGAGGATGAAGATCAAATGATACTGGCTGACTGGGCATATCATTGCTATGAGCAAAACAAACTGCACCAGCTATTCAGAAACGACGACGATAAGGCAAAGGATGACATCGAGGAGATGAAAACATATTTGATGATCGCGTTTTGGTGCATTCAAGAGGATGCATCACGAAGACCGACCATGAGAAATGTCACACAGATGCTCGAAGGAACTGTTGAACTCTCAAACCCACCGAATCCATCATCATTATACGTTCAATGTAAGGGATTGTGA

Protein Analysis

801

Amino Acids

90.02

Weight (kDa)

6.41

Isoelectric Point (pI)

36.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 79 - 169 2.4e-14 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 509 - 778 9.2e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 510 - 776 2.3e-49 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000299)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43401 FvH4_3g43402 FvH4_3g43403 FvH4_3g43440 FvH4_3g43710 FvH4_3g43772
malus_domestica MD03G1021800.v1.1 MD03G1022000.v1.1 MD11G1024500.v1.1 MD11G1024700.v1.1 MD11G1025200.v1.1 MD11G1025500.v1.1 MD11G1025600.v1.1 MD11G1026200.v1.1 MD11G1026400.v1.1 MD11G1026500.v1.1 MD11G1026600.v1.1 MD11G1026800.v1.1 MD11G1027300.v1.1
prunus_persica Prupe.6G020400_v2.0.a1 Prupe.6G020500_v2.0.a1 Prupe.6G020600_v2.0.a1 Prupe.6G020700_v2.0.a1 Prupe.6G020800_v2.0.a1 Prupe.6G020900_v2.0.a1 Prupe.6G021000_v2.0.a1 Prupe.6G021500_v2.0.a1 Prupe.6G021600_v2.0.a1
pyrus_communis pycom03g01850 pycom03g01870 pycom03g01900 pycom03g01910 pycom11g01950 pycom11g01980 pycom11g01990 pycom11g02030 pycom11g02040
rosa_chinensis RchiOBHm_Chr5g0077411 RchiOBHm_Chr5g0077421 RchiOBHm_Chr5g0077571 RchiOBHm_Chr5g0077601 RchiOBHm_Chr5g0077621 RchiOBHm_Chr5g0077651 RchiOBHm_Chr5g0077661 RchiOBHm_Chr5g0077671 RchiOBHm_Chr5g0077701 RchiOBHm_Chr5g0077741 RchiOBHm_Chr5g0077791 RchiOBHm_Chr5g0077861 RchiOBHm_Chr5g0078871 RchiOBHm_Chr5g0078901 RchiOBHm_Chr5g0078941 RchiOBHm_Chr5g0079081 RchiOBHm_Chr5g0079091 RchiOBHm_Chr7g0233481
rosa_laevigata RLG00000036694 RLG00000036704 RLG00000036705 RLG00000036710 RLG00000036713 RLG00000036714 RLG00000036716 RLG00000036793 RLG00000036796 RLG00000036804 RLG00000036806
rosa_multiflora Rmu_co8130992.1_g000001 Rmu_sc0000029.1_g000037 Rmu_sc0002187.1_g000023 Rmu_sc0004168.1_g000001 Rmu_sc0004168.1_g000004 Rmu_sc0004168.1_g000018 Rmu_sc0004168.1_g000028 Rmu_sc0004168.1_g000033 Rmu_sc0004168.1_g000056 Rmu_sc0004277.1_g000009 Rmu_sc0004277.1_g000016 Rmu_sc0004277.1_g000018 Rmu_sc0004277.1_g000020 Rmu_sc0004277.1_g000084 Rmu_sc0004277.1_g000087 Rmu_sc0012487.1_g000001 Rmu_sc0012487.1_g000002
rosa_roxburghii Rroxscaffold_1G00003760 Rroxscaffold_1G00003780 Rroxscaffold_1G00004370 Rroxscaffold_1G00004400 Rroxscaffold_1G00004490 Rroxscaffold_1G00004510 Rroxscaffold_3G00227260 Rroxscaffold_5G00366480
rosa_rugosa Rorug05G0454800 Rorug05G0455700 Rorug05G0455900 Rorug05G0456100 Rorug05G0456300 Rorug05G0456700.1 Rorug05G0461800 Rorug05G0462100 Rorug07G0280900.1 Rorug07G0281000
rosa_samantha Rh5CG562200 Rh5DG543500 Rh5DG544200 Rh5DG544400 Rh5DG544500 Rh5DG544600 Rh5DG544700 Rh5DG544900 Rh5DG545200 Rh5DG549700 Rh7DG426000
rosa_wichuraiana Rw0G003130 Rw0G023780 Rw0G023790 Rw5G046780 Rw5G047330 Rw5G047350 Rw5G047370 Rw5G047390 Rw5G047420 Rw7G036050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1625
AccB1I GGYRCC 1 cut(s) 843
AccI GTMKAC 1 cut(s) 804
AccII CGCG 1 cut(s) 2270
AciI CCGC 3 cut(s) 651, 915, 1368
AclWI GGATC 5 cut(s) 286, 361, 1250, 1301, 1853
AcoI YGGCCR 2 cut(s) 304, 414
AcsI RAATTY 5 cut(s) 158, 880, 1646, 1734, 1748
AcuI CTGAAG 3 cut(s) 652, 975, 1677
AcyI GRCGYC 1 cut(s) 844
AfaI GTAC 3 cut(s) 779, 889, 1496
AfiI CCNNNNNNNGG 3 cut(s) 1265, 1590, 2031
AgeI ACCGGT 1 cut(s) 961
AjiI CACGTC 1 cut(s) 1544
AjnI CCWGG 3 cut(s) 137, 538, 846
Alw26I GTCTC 2 cut(s) 1098, 1358
AlwI GGATC 5 cut(s) 286, 361, 1250, 1301, 1853
AlwNI CAGNNNCTG 1 cut(s) 1107
Ama87I CYCGRG 3 cut(s) 773, 823, 1459
AoxI GGCC 5 cut(s) 304, 414, 1109, 1796, 2022
ApeKI GCWGC 4 cut(s) 383, 648, 1726, 2106
ApoI RAATTY 5 cut(s) 158, 880, 1646, 1734, 1748
AsiGI ACCGGT 1 cut(s) 961
Asp700I GAANNNNTTC 2 cut(s) 1318, 1487
AspLEI GCGC 4 cut(s) 559, 846, 1667, 1731
AspS9I GGNCC 2 cut(s) 959, 2023
AsuC2I CCSGG 2 cut(s) 1460, 1461
AsuHPI GGTGA 2 cut(s) 138, 167
AsuNHI GCTAGC 1 cut(s) 512
AvaI CYCGRG 3 cut(s) 773, 823, 1459
AvaII GGWCC 1 cut(s) 959
BaeGI GKGCMC 2 cut(s) 701, 977
BalI TGGCCA 2 cut(s) 306, 416
BanI GGYRCC 1 cut(s) 843
BanII GRGCYC 1 cut(s) 104
BbsI GAAGAC 2 cut(s) 849, 2308
BbvI GCAGC 4 cut(s) 395, 660, 1738, 2093
BccI CCATC 9 cut(s) 157, 185, 296, 563, 974, 1434, 1583, 2125, 2377
BceAI ACGGC 3 cut(s) 537, 1175, 1777
BciT130I CCWGG 3 cut(s) 139, 540, 848
BciVI GTATCC 2 cut(s) 977, 1883
BclI TGATCA 1 cut(s) 1051
BcnI CCSGG 2 cut(s) 1460, 1461
BcoDI GTCTC 2 cut(s) 1098, 1358
BfmI CTRYAG 1 cut(s) 2107
BfoI RGCGCY 1 cut(s) 847
BfuI GTATCC 2 cut(s) 977, 1883
BglI GCCNNNNNGGC 1 cut(s) 678
BisI GCNGC 4 cut(s) 384, 649, 1727, 2107
BlsI GCNGC 4 cut(s) 385, 650, 1728, 2108
Bme1390I CCNGG 5 cut(s) 139, 540, 848, 1460, 1461
Bme18I GGWCC 1 cut(s) 959
BmeT110I CYCGRG 3 cut(s) 773, 823, 1459
BmgBI CACGTC 1 cut(s) 1544
BmgT120I GGNCC 2 cut(s) 959, 2023
BmiI GGNNCC 4 cut(s) 197, 456, 845, 2025
BmrFI CCNGG 5 cut(s) 139, 540, 848, 1460, 1461
BmrI ACTGGG 2 cut(s) 191, 2173
BmsI GCATC 6 cut(s) 533, 1010, 1589, 2281, 2303, 2319
BmtI GCTAGC 1 cut(s) 516
BmuI ACTGGG 2 cut(s) 191, 2173
BpiI GAAGAC 2 cut(s) 849, 2308
BplI GAGNNNNNCTC 2 cut(s) 756, 788
BpmI CTGGAG 2 cut(s) 54, 390
BpuEI CTTGAG 1 cut(s) 302
BpuMI CCSGG 2 cut(s) 1460, 1461
Bsa29I ATCGAT 1 cut(s) 1296
BsaAI YACGTR 1 cut(s) 1494
BsaBI GATNNNNATC 2 cut(s) 148, 2142
BsaHI GRCGYC 1 cut(s) 844
BsaI GGTCTC 1 cut(s) 1358
BsaJI CCNNGG 6 cut(s) 96, 539, 847, 1357, 1459, 1827
BsaWI WCCGGW 1 cut(s) 961
Bsc4I CCNNNNNNNGG 3 cut(s) 1265, 1590, 2031
Bse118I RCCGGY 2 cut(s) 398, 961
Bse3DI GCAATG 2 cut(s) 774, 2173
Bse8I GATNNNNATC 2 cut(s) 148, 2142
BseBI CCWGG 3 cut(s) 139, 540, 848
BseCI ATCGAT 1 cut(s) 1296
BseDI CCNNGG 6 cut(s) 96, 539, 847, 1357, 1459, 1827
BseGI GGATG 7 cut(s) 104, 134, 1025, 1580, 2143, 2239, 2296
BseJI GATNNNNATC 2 cut(s) 148, 2142
BseLI CCNNNNNNNGG 3 cut(s) 1265, 1590, 2031
BseMI GCAATG 2 cut(s) 774, 2173
BseMII CTCAG 3 cut(s) 296, 633, 1055
BseRI GAGGAG 3 cut(s) 1346, 1877, 2258
BseSI GKGCMC 2 cut(s) 701, 977
BseXI GCAGC 4 cut(s) 395, 660, 1738, 2093
BsgI GTGCAG 2 cut(s) 99, 2180
Bsh1236I CGCG 1 cut(s) 2270
BshFI GGCC 5 cut(s) 306, 416, 1111, 1798, 2024
BshNI GGYRCC 1 cut(s) 843
BshTI ACCGGT 1 cut(s) 961
BshVI ATCGAT 1 cut(s) 1296
BsiHKCI CYCGRG 3 cut(s) 773, 823, 1459
BsiSI CCGG 3 cut(s) 399, 962, 1460
BslFI GGGAC 1 cut(s) 2020
BslI CCNNNNNNNGG 3 cut(s) 1265, 1590, 2031
BsmAI GTCTC 2 cut(s) 1098, 1358
BsmFI GGGAC 1 cut(s) 2020
BsmI GAATGC 2 cut(s) 1318, 2280
BsnI GGCC 5 cut(s) 306, 416, 1111, 1798, 2024
Bso31I GGTCTC 1 cut(s) 1358
BsoBI CYCGRG 3 cut(s) 773, 823, 1459
Bsp1286I GDGCHC 3 cut(s) 104, 701, 977
Bsp143I GATC 9 cut(s) 143, 278, 353, 1051, 1255, 1293, 1845, 2143, 2265
BspACI CCGC 3 cut(s) 651, 915, 1368
BspANI GGCC 5 cut(s) 306, 416, 1111, 1798, 2024
BspCNI CTCAG 3 cut(s) 295, 634, 1054
BspDI ATCGAT 1 cut(s) 1296
BspFNI CGCG 1 cut(s) 2270
BspHI TCATGA 1 cut(s) 619
BspLI GGNNCC 4 cut(s) 197, 456, 845, 2025
BspMAI CTGCAG 1 cut(s) 2111
BspOI GCTAGC 1 cut(s) 516
BspPI GGATC 5 cut(s) 286, 361, 1250, 1301, 1853
BspT107I GGYRCC 1 cut(s) 843
BspTNI GGTCTC 1 cut(s) 1358
BsrDI GCAATG 2 cut(s) 774, 2173
BsrFI RCCGGY 2 cut(s) 398, 961
BssAI RCCGGY 2 cut(s) 398, 961
BssECI CCNNGG 6 cut(s) 96, 539, 847, 1357, 1459, 1827
BssMI GATC 9 cut(s) 143, 278, 353, 1051, 1255, 1293, 1845, 2143, 2265
BssNI GRCGYC 1 cut(s) 844
BssT1I CCWWGG 2 cut(s) 96, 1827
Bst2UI CCWGG 3 cut(s) 139, 540, 848
Bst4CI ACNGT 6 cut(s) 579, 1217, 1264, 1561, 2056, 2344
Bst6I CTCTTC 1 cut(s) 1810
BstACI GRCGYC 1 cut(s) 844
BstAPI GCANNNNNTGC 1 cut(s) 1940
BstBAI YACGTR 1 cut(s) 1494
BstC8I GCNNGC 5 cut(s) 514, 1025, 1160, 1774, 2045
BstDEI CTNAG 6 cut(s) 282, 642, 898, 1041, 1172, 1693
BstF5I GGATG 7 cut(s) 104, 134, 1025, 1580, 2143, 2239, 2296
BstFNI CGCG 1 cut(s) 2270
BstH2I RGCGCY 1 cut(s) 847
BstHHI GCGC 4 cut(s) 559, 846, 1667, 1731
BstKTI GATC 9 cut(s) 146, 281, 356, 1054, 1258, 1296, 1848, 2146, 2268
BstMAI GTCTC 2 cut(s) 1098, 1358
BstMBI GATC 9 cut(s) 143, 278, 353, 1051, 1255, 1293, 1845, 2143, 2265
BstMWI GCNNNNNNNGC 7 cut(s) 383, 678, 912, 1135, 1671, 1940, 2165
BstNI CCWGG 3 cut(s) 139, 540, 848
BstNSI RCATGY 2 cut(s) 924, 1601
BstSCI CCNGG 5 cut(s) 137, 538, 846, 1458, 1459
BstSFI CTRYAG 1 cut(s) 2107
BstSLI GKGCMC 2 cut(s) 701, 977
BstUI CGCG 1 cut(s) 2270
BstV1I GCAGC 4 cut(s) 395, 660, 1738, 2093
BstV2I GAAGAC 2 cut(s) 849, 2308
BstX2I RGATCY 3 cut(s) 278, 353, 1845
BstYI RGATCY 3 cut(s) 278, 353, 1845
Bsu15I ATCGAT 1 cut(s) 1296
BsuI GTATCC 2 cut(s) 977, 1883
BsuRI GGCC 5 cut(s) 306, 416, 1111, 1798, 2024
BsuTUI ATCGAT 1 cut(s) 1296
BtrI CACGTC 1 cut(s) 1544
BtsCI GGATG 7 cut(s) 104, 134, 1025, 1580, 2143, 2239, 2296
BtsI GCAGTG 1 cut(s) 111
BtsIMutI CAGTG 3 cut(s) 111, 639, 1260
Cac8I GCNNGC 5 cut(s) 514, 1025, 1160, 1774, 2045
CaiI CAGNNNCTG 1 cut(s) 1107
CciI TCATGA 1 cut(s) 619
CfoI GCGC 4 cut(s) 559, 846, 1667, 1731
Cfr10I RCCGGY 2 cut(s) 398, 961
Cfr13I GGNCC 2 cut(s) 959, 2023
Cfr9I CCCGGG 1 cut(s) 1459
ClaI ATCGAT 1 cut(s) 1296
Csp6I GTAC 3 cut(s) 778, 888, 1495
CspAI ACCGGT 1 cut(s) 961
CviAII CATG 8 cut(s) 388, 620, 921, 1094, 1498, 1598, 1859, 2311
CviQI GTAC 3 cut(s) 778, 888, 1495
DdeI CTNAG 6 cut(s) 282, 642, 898, 1041, 1172, 1693
DinI GGCGCC 1 cut(s) 845
DpnI GATC 9 cut(s) 145, 280, 355, 1053, 1257, 1295, 1847, 2145, 2267
DpnII GATC 9 cut(s) 143, 278, 353, 1051, 1255, 1293, 1845, 2143, 2265
DraI TTTAAA 1 cut(s) 489
DrdI GACNNNNNNGTC 1 cut(s) 1625
DseDI GACNNNNNNGTC 1 cut(s) 1625
EaeI YGGCCR 2 cut(s) 304, 414
Eam1104I CTCTTC 1 cut(s) 1810
EarI CTCTTC 1 cut(s) 1810
Eco130I CCWWGG 2 cut(s) 96, 1827
Eco24I GRGCYC 1 cut(s) 104
Eco31I GGTCTC 1 cut(s) 1358
Eco47I GGWCC 1 cut(s) 959
Eco57I CTGAAG 3 cut(s) 652, 975, 1677
Eco88I CYCGRG 3 cut(s) 773, 823, 1459
EcoRI GAATTC 2 cut(s) 1646, 1734
EcoRII CCWGG 3 cut(s) 137, 538, 846
EcoT14I CCWWGG 2 cut(s) 96, 1827
EcoT22I ATGCAT 1 cut(s) 2296
EcoT38I GRGCYC 1 cut(s) 104
EgeI GGCGCC 1 cut(s) 845
EheI GGCGCC 1 cut(s) 845
ErhI CCWWGG 2 cut(s) 96, 1827
FaeI CATG 8 cut(s) 391, 623, 924, 1097, 1501, 1601, 1862, 2314
FalI AAGNNNNNCTT 2 cut(s) 1016, 1048
FaqI GGGAC 1 cut(s) 2020
FatI CATG 8 cut(s) 387, 619, 920, 1093, 1497, 1597, 1858, 2310
FbaI TGATCA 1 cut(s) 1051
FblI GTMKAC 1 cut(s) 804
Fnu4HI GCNGC 4 cut(s) 384, 649, 1727, 2107
FokI GGATG 7 cut(s) 91, 121, 1032, 1567, 2150, 2246, 2303
FriOI GRGCYC 1 cut(s) 104
Fsp4HI GCNGC 4 cut(s) 384, 649, 1727, 2107
GlaI GCGC 4 cut(s) 558, 845, 1666, 1730
GluI GCNGC 4 cut(s) 384, 649, 1727, 2107
GsuI CTGGAG 2 cut(s) 54, 390
HaeII RGCGCY 1 cut(s) 847
HaeIII GGCC 5 cut(s) 306, 416, 1111, 1798, 2024
HapII CCGG 3 cut(s) 399, 962, 1460
HhaI GCGC 4 cut(s) 559, 846, 1667, 1731
Hin1I GRCGYC 1 cut(s) 844
Hin1II CATG 8 cut(s) 391, 623, 924, 1097, 1501, 1601, 1862, 2314
Hin6I GCGC 4 cut(s) 557, 844, 1665, 1729
HinP1I GCGC 4 cut(s) 557, 844, 1665, 1729
HincII GTYRAC 1 cut(s) 633
HindII GTYRAC 1 cut(s) 633
HindIII AAGCTT 3 cut(s) 1774, 1961, 2041
HinfI GANTC 9 cut(s) 546, 608, 1298, 1524, 1790, 1922, 1981, 1998, 2365
HpaII CCGG 3 cut(s) 399, 962, 1460
HphI GGTGA 2 cut(s) 138, 167
Hpy166II GTNNAC 4 cut(s) 633, 805, 1406, 2071
Hpy188III TCNNGA 7 cut(s) 620, 1064, 1088, 1311, 1916, 2285, 2298
Hpy8I GTNNAC 4 cut(s) 633, 805, 1406, 2071
Hpy99I CGWCG 2 cut(s) 2219, 2222
HpyAV CCTTC 8 cut(s) 53, 877, 885, 950, 1219, 1242, 1715, 2330
HpyCH4III ACNGT 6 cut(s) 579, 1217, 1264, 1561, 2056, 2344
HpyCH4IV ACGT 3 cut(s) 1493, 1543, 2382
HpyF10VI GCNNNNNNNGC 7 cut(s) 383, 678, 912, 1135, 1671, 1940, 2165
HpyF3I CTNAG 6 cut(s) 282, 642, 898, 1041, 1172, 1693
HpySE526I ACGT 3 cut(s) 1493, 1543, 2382
Hsp92I GRCGYC 1 cut(s) 844
Hsp92II CATG 8 cut(s) 391, 623, 924, 1097, 1501, 1601, 1862, 2314
HspAI GCGC 4 cut(s) 557, 844, 1665, 1729
KasI GGCGCC 1 cut(s) 843
Ksp22I TGATCA 1 cut(s) 1051
Kzo9I GATC 9 cut(s) 143, 278, 353, 1051, 1255, 1293, 1845, 2143, 2265
LmnI GCTCC 4 cut(s) 1370, 1389, 1501, 1511
Lsp1109I GCAGC 4 cut(s) 395, 660, 1738, 2093
LweI GCATC 6 cut(s) 533, 1010, 1589, 2281, 2303, 2319
MaeII ACGT 3 cut(s) 1493, 1543, 2382
MaeIII GTNAC 4 cut(s) 1175, 1889, 2050, 2320
MalI GATC 9 cut(s) 145, 280, 355, 1053, 1257, 1295, 1847, 2145, 2267
MboI GATC 9 cut(s) 143, 278, 353, 1051, 1255, 1293, 1845, 2143, 2265
MfeI CAATTG 1 cut(s) 1668
MflI RGATCY 3 cut(s) 278, 353, 1845
MhlI GDGCHC 3 cut(s) 104, 701, 977
MlsI TGGCCA 2 cut(s) 306, 416
MluNI TGGCCA 2 cut(s) 306, 416
Mly113I GGCGCC 1 cut(s) 844
MlyI GAGTC 3 cut(s) 1799, 1916, 1975
MmeI TCCRAC 1 cut(s) 1199
Mox20I TGGCCA 2 cut(s) 306, 416
Mph1103I ATGCAT 1 cut(s) 2296
MroXI GAANNNNTTC 2 cut(s) 1318, 1487
MscI TGGCCA 2 cut(s) 306, 416
MseI TTAA 2 cut(s) 488, 717
MslI CAYNNNNRTG 3 cut(s) 1496, 2178, 2327
Msp20I TGGCCA 2 cut(s) 306, 416
MspA1I CMGCKG 1 cut(s) 651
MspI CCGG 3 cut(s) 399, 962, 1460
MspR9I CCNGG 5 cut(s) 139, 540, 848, 1460, 1461
MunI CAATTG 1 cut(s) 1668
Mva1269I GAATGC 2 cut(s) 1318, 2280
MvaI CCWGG 3 cut(s) 139, 540, 848
MvnI CGCG 1 cut(s) 2270
MwoI GCNNNNNNNGC 7 cut(s) 383, 678, 912, 1135, 1671, 1940, 2165
NarI GGCGCC 1 cut(s) 844
NciI CCSGG 2 cut(s) 1460, 1461
NdeII GATC 9 cut(s) 143, 278, 353, 1051, 1255, 1293, 1845, 2143, 2265
NheI GCTAGC 1 cut(s) 512
NlaIII CATG 8 cut(s) 391, 623, 924, 1097, 1501, 1601, 1862, 2314
NlaIV GGNNCC 4 cut(s) 197, 456, 845, 2025
NmeAIII GCCGAG 1 cut(s) 1324
NmuCI GTSAC 4 cut(s) 1175, 1889, 2050, 2320
NsiI ATGCAT 1 cut(s) 2296
NspI RCATGY 2 cut(s) 924, 1601
PaeR7I CTCGAG 1 cut(s) 773
PagI TCATGA 1 cut(s) 619
PctI GAATGC 2 cut(s) 1318, 2280
PdmI GAANNNNTTC 2 cut(s) 1318, 1487
PfeI GAWTC 6 cut(s) 546, 608, 1298, 1524, 1998, 2365
PinAI ACCGGT 1 cut(s) 961
PkrI GCNGC 4 cut(s) 385, 650, 1728, 2108
PleI GAGTC 3 cut(s) 1798, 1916, 1975
PluTI GGCGCC 1 cut(s) 847
PpsI GAGTC 3 cut(s) 1798, 1916, 1975
Ppu21I YACGTR 1 cut(s) 1494
Psp6I CCWGG 3 cut(s) 137, 538, 846
PspGI CCWGG 3 cut(s) 137, 538, 846
PspN4I GGNNCC 4 cut(s) 197, 456, 845, 2025
PspPI GGNCC 2 cut(s) 959, 2023
PspXI VCTCGAGB 1 cut(s) 773
PstI CTGCAG 1 cut(s) 2111
PstNI CAGNNNCTG 1 cut(s) 1107
PsuI RGATCY 3 cut(s) 278, 353, 1845
RsaI GTAC 3 cut(s) 779, 889, 1496
RsaNI GTAC 3 cut(s) 778, 888, 1495
RseI CAYNNNNRTG 3 cut(s) 1496, 2178, 2327
SaqAI TTAA 2 cut(s) 488, 717
SatI GCNGC 4 cut(s) 384, 649, 1727, 2107
Sau3AI GATC 9 cut(s) 143, 278, 353, 1051, 1255, 1293, 1845, 2143, 2265
Sau96I GGNCC 2 cut(s) 959, 2023
SchI GAGTC 3 cut(s) 1799, 1916, 1975
ScrFI CCNGG 5 cut(s) 139, 540, 848, 1460, 1461
SduI GDGCHC 3 cut(s) 104, 701, 977
SfaNI GCATC 6 cut(s) 533, 1010, 1589, 2281, 2303, 2319
SfcI CTRYAG 1 cut(s) 2107
SfoI GGCGCC 1 cut(s) 845
Sfr274I CTCGAG 1 cut(s) 773
SinI GGWCC 1 cut(s) 959
SlaI CTCGAG 1 cut(s) 773
SmaI CCCGGG 1 cut(s) 1461
SmiMI CAYNNNNRTG 3 cut(s) 1496, 2178, 2327
SmlI CTYRAG 2 cut(s) 317, 773
SmoI CTYRAG 2 cut(s) 317, 773
SsiI CCGC 3 cut(s) 651, 915, 1368
SspDI GGCGCC 1 cut(s) 843
SspI AATATT 1 cut(s) 434
StyD4I CCNGG 5 cut(s) 137, 538, 846, 1458, 1459
StyI CCWWGG 2 cut(s) 96, 1827
TaaI ACNGT 6 cut(s) 579, 1217, 1264, 1561, 2056, 2344
TaiI ACGT 3 cut(s) 1496, 1546, 2385
TaqI TCGA 6 cut(s) 774, 1080, 1296, 1984, 2241, 2334
TaqII GACCGA 1 cut(s) 2320
TatI WGTACW 1 cut(s) 777
TfiI GAWTC 6 cut(s) 546, 608, 1298, 1524, 1998, 2365
Tru1I TTAA 2 cut(s) 488, 717
Tru9I TTAA 2 cut(s) 488, 717
TscAI CASTG 3 cut(s) 118, 646, 1267
TseFI GTSAC 4 cut(s) 1175, 1889, 2050, 2320
TseI GCWGC 4 cut(s) 383, 648, 1726, 2106
Tsp45I GTSAC 4 cut(s) 1175, 1889, 2050, 2320
TspDTI ATGAA 7 cut(s) 859, 1110, 1256, 1761, 2136, 2154, 2264
TspGWI ACGGA 2 cut(s) 1260, 1536
TspMI CCCGGG 1 cut(s) 1459
TspRI CASTG 3 cut(s) 118, 646, 1267
VpaK11BI GGWCC 1 cut(s) 959
XapI RAATTY 5 cut(s) 158, 880, 1646, 1734, 1748
XbaI TCTAGA 1 cut(s) 1915
XceI RCATGY 2 cut(s) 924, 1601
XhoI CTCGAG 1 cut(s) 773
XmaI CCCGGG 1 cut(s) 1459
XmiI GTMKAC 1 cut(s) 804
XmnI GAANNNNTTC 2 cut(s) 1318, 1487
Zsp2I ATGCAT 1 cut(s) 2296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.